Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83495.t1 | XP_003612484.1 | 97.7 | 133 | 3 | 0 | 1 | 133 | 1 | 133 | 3.70E-63 | 250.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83495.t1 | G7K410 | 97.7 | 133 | 3 | 0 | 1 | 133 | 1 | 133 | 2.6e-63 | 250.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene83495.t1 | TR | SWI/SNF-BAF60b |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene83495 | 0.825816 | 3.81E-54 | -1.69E-46 |
| MS.gene049756 | MS.gene83495 | 0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene83495 | 0.804201 | 2.42E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene83495 | 0.876217 | 1.66E-68 | -1.69E-46 |
| MS.gene050303 | MS.gene83495 | 0.827421 | 1.58E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene83495 | 0.807667 | 4.52E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene83495 | 0.810729 | 9.97E-51 | -1.69E-46 |
| MS.gene051063 | MS.gene83495 | 0.810322 | 1.22E-50 | -1.69E-46 |
| MS.gene051243 | MS.gene83495 | 0.826828 | 2.19E-54 | -1.69E-46 |
| MS.gene051245 | MS.gene83495 | 0.802155 | 6.42E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene83495 | 0.806462 | 8.13E-50 | -1.69E-46 |
| MS.gene051349 | MS.gene83495 | 0.809369 | 1.96E-50 | -1.69E-46 |
| MS.gene05134 | MS.gene83495 | 0.812922 | 3.32E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene83495 | 0.829849 | 4.09E-55 | -1.69E-46 |
| MS.gene051746 | MS.gene83495 | 0.854363 | 1.29E-61 | -1.69E-46 |
| MS.gene051748 | MS.gene83495 | 0.850905 | 1.26E-60 | -1.69E-46 |
| MS.gene051903 | MS.gene83495 | 0.826616 | 2.46E-54 | -1.69E-46 |
| MS.gene052176 | MS.gene83495 | 0.812294 | 4.56E-51 | -1.69E-46 |
| MS.gene052286 | MS.gene83495 | 0.842212 | 2.97E-58 | -1.69E-46 |
| MS.gene052302 | MS.gene83495 | 0.835673 | 1.46E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene83495 | 0.82896 | 6.72E-55 | -1.69E-46 |
| MS.gene052947 | MS.gene83495 | 0.836348 | 9.87E-57 | -1.69E-46 |
| MS.gene055778 | MS.gene83495 | 0.810326 | 1.22E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene83495 | 0.806159 | 9.42E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene83495 | -0.821507 | 3.89E-53 | -1.69E-46 |
| MS.gene056091 | MS.gene83495 | 0.820233 | 7.64E-53 | -1.69E-46 |
| MS.gene056631 | MS.gene83495 | 0.866838 | 2.13E-65 | -1.69E-46 |
| MS.gene056760 | MS.gene83495 | 0.801822 | 7.51E-49 | -1.69E-46 |
| MS.gene057057 | MS.gene83495 | 0.815156 | 1.07E-51 | -1.69E-46 |
| MS.gene057079 | MS.gene83495 | 0.828168 | 1.04E-54 | -1.69E-46 |
| MS.gene057140 | MS.gene83495 | 0.819138 | 1.36E-52 | -1.69E-46 |
| MS.gene057234 | MS.gene83495 | 0.824785 | 6.69E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene83495 | 0.843169 | 1.65E-58 | -1.69E-46 |
| MS.gene05795 | MS.gene83495 | 0.843049 | 1.78E-58 | -1.69E-46 |
| MS.gene058055 | MS.gene83495 | 0.812679 | 3.76E-51 | -1.69E-46 |
| MS.gene058084 | MS.gene83495 | 0.823635 | 1.25E-53 | -1.69E-46 |
| MS.gene058182 | MS.gene83495 | 0.809817 | 1.57E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene83495 | 0.812155 | 4.89E-51 | -1.69E-46 |
| MS.gene058798 | MS.gene83495 | 0.814028 | 1.90E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene83495 | 0.864714 | 9.97E-65 | -1.69E-46 |
| MS.gene05954 | MS.gene83495 | 0.802319 | 5.94E-49 | -1.69E-46 |
| MS.gene059898 | MS.gene83495 | 0.831103 | 2.02E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene83495 | 0.861131 | 1.27E-63 | -1.69E-46 |
| MS.gene060165 | MS.gene83495 | 0.820465 | 6.76E-53 | -1.69E-46 |
| MS.gene060619 | MS.gene83495 | 0.823091 | 1.67E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83495.t1 | MTR_5g025520 | 97.744 | 133 | 3 | 0 | 1 | 133 | 1 | 133 | 3.30e-93 | 265 |
| MS.gene83495.t1 | MTR_5g025500 | 37.662 | 77 | 48 | 0 | 26 | 102 | 54 | 130 | 1.42e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCAAACTCTACAGTTTC+CGG | 0.200149 | 5.3:-15076787 | MS.gene83495:CDS |
| ATGAATCCGGCGGGTTTAAC+AGG | 0.280966 | 5.3:-15076959 | MS.gene83495:CDS |
| GGAAATGATGGAAGCAATTT+CGG | 0.295914 | 5.3:+15076814 | None:intergenic |
| CATGATTTCGGCGACGGCTT+TGG | 0.360532 | 5.3:+15076913 | None:intergenic |
| CAGTGAACTCTGCACTTTCA+TGG | 0.368977 | 5.3:-15076858 | MS.gene83495:CDS |
| CATCAAACTCTACAGTTTCC+GGG | 0.376717 | 5.3:-15076786 | MS.gene83495:intron |
| ATCGCACCCTGGCTGAATTC+CGG | 0.377231 | 5.3:+15075618 | None:intergenic |
| TTTGCCGACACCCATGATTT+CGG | 0.381159 | 5.3:+15076901 | None:intergenic |
| TTTGATGAACTTGGAAATGA+TGG | 0.402949 | 5.3:+15076802 | None:intergenic |
| ACTGGTAGCTTTGCGTGTCT+TGG | 0.404946 | 5.3:+15076877 | None:intergenic |
| CAAAGCCGTCGCCGAAATCA+TGG | 0.409452 | 5.3:-15076912 | MS.gene83495:CDS |
| GTATCAAGAAAGACAAGCTT+TGG | 0.428352 | 5.3:-15075713 | MS.gene83495:CDS |
| ACTGTAGAGTTTGATGAACT+TGG | 0.446589 | 5.3:+15076793 | None:intergenic |
| GGGAAAGGCCAACAGAAGAA+AGG | 0.464992 | 5.3:-15075549 | MS.gene83495:CDS |
| GACAGAATCTTAGCAATCTC+AGG | 0.466374 | 5.3:+15075642 | None:intergenic |
| TAATATCAAGGATACTAATA+CGG | 0.503603 | 5.3:-15075595 | MS.gene83495:CDS |
| TCTGTCTCCGGAATTCAGCC+AGG | 0.504471 | 5.3:-15075625 | MS.gene83495:CDS |
| GACACCCATGATTTCGGCGA+CGG | 0.507275 | 5.3:+15076907 | None:intergenic |
| GGAAAGGCCAACAGAAGAAA+GGG | 0.508550 | 5.3:-15075548 | MS.gene83495:CDS |
| GATTGCTAAGATTCTGTCTC+CGG | 0.511219 | 5.3:-15075637 | MS.gene83495:CDS |
| AGTGAACTCTGCACTTTCAT+GGG | 0.512210 | 5.3:-15076857 | MS.gene83495:CDS |
| AGCTTGTCTTTCTTGATACC+AGG | 0.515565 | 5.3:+15075717 | None:intergenic |
| TATGGTGTTGTGCAGAGTCC+TGG | 0.516143 | 5.3:-15075735 | MS.gene83495:intron |
| CCAGGGTGCGATTAATATCA+AGG | 0.519238 | 5.3:-15075607 | MS.gene83495:CDS |
| CATGAAAGTGCAGAGTTCAC+TGG | 0.524418 | 5.3:+15076859 | None:intergenic |
| ATCCAGCAGAAGGATGAATC+CGG | 0.526821 | 5.3:-15076972 | None:intergenic |
| CTTCGCCCTGTTAAACCCGC+CGG | 0.548257 | 5.3:+15076953 | None:intergenic |
| TATCAAGAAAGACAAGCTTT+GGG | 0.550356 | 5.3:-15075712 | MS.gene83495:CDS |
| TCTTCCGCGGATAACACAAA+GGG | 0.561908 | 5.3:-15075570 | MS.gene83495:CDS |
| AAAGCCGTCGCCGAAATCAT+GGG | 0.576114 | 5.3:-15076911 | MS.gene83495:CDS |
| GCGGATAACACAAAGGGGAA+AGG | 0.582569 | 5.3:-15075564 | MS.gene83495:CDS |
| TTCTTCCGCGGATAACACAA+AGG | 0.602214 | 5.3:-15075571 | MS.gene83495:CDS |
| CGGCGGGTTTAACAGGGCGA+AGG | 0.602549 | 5.3:-15076952 | MS.gene83495:CDS |
| TGAATCCGGCGGGTTTAACA+GGG | 0.604481 | 5.3:-15076958 | MS.gene83495:CDS |
| GTCGCCGAAATCATGGGTGT+CGG | 0.610089 | 5.3:-15076905 | MS.gene83495:CDS |
| AGCAGAAGGATGAATCCGGC+GGG | 0.612519 | 5.3:-15076968 | None:intergenic |
| AATTTGCAAACACTGTTGCG+TGG | 0.632781 | 5.3:-15075684 | MS.gene83495:CDS |
| TTGCGTGGCAGAAACAGCGT+TGG | 0.639499 | 5.3:-15075669 | MS.gene83495:CDS |
| ATTTCGGAACGAGATTGATG+AGG | 0.642540 | 5.3:+15076830 | None:intergenic |
| CTGTCTCCGGAATTCAGCCA+GGG | 0.642587 | 5.3:-15075624 | MS.gene83495:CDS |
| AGGGCGAAGGAGCATGTCGA+CGG | 0.655015 | 5.3:-15076939 | MS.gene83495:CDS |
| CAGCAGAAGGATGAATCCGG+CGG | 0.656372 | 5.3:-15076969 | None:intergenic |
| TACTAATACGGATTCTTCCG+CGG | 0.657291 | 5.3:-15075583 | MS.gene83495:CDS |
| CCTTGATATTAATCGCACCC+TGG | 0.662781 | 5.3:+15075607 | None:intergenic |
| TTTCCCCTTTGTGTTATCCG+CGG | 0.666626 | 5.3:+15075566 | None:intergenic |
| CTTCCGCGGATAACACAAAG+GGG | 0.722706 | 5.3:-15075569 | MS.gene83495:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATAATAAAAGATAAAATA+AGG | + | chr5.3:15076580-15076599 | None:intergenic | 10.0% |
| !! | AATGAAACAAAAAGAAAAAT+GGG | + | chr5.3:15075746-15075765 | None:intergenic | 15.0% |
| !! | TAATGAAACAAAAAGAAAAA+TGG | + | chr5.3:15075747-15075766 | None:intergenic | 15.0% |
| !!! | TTTATTTACTTTTGCTTATT+TGG | - | chr5.3:15076729-15076748 | MS.gene83495:intron | 15.0% |
| !! | ATTAAGCTGTTTATAAAAAC+AGG | - | chr5.3:15076523-15076542 | MS.gene83495:intron | 20.0% |
| !! | CTTTCCATAAAATAAGATAT+AGG | + | chr5.3:15076550-15076569 | None:intergenic | 20.0% |
| !! | TAATATCAAGGATACTAATA+CGG | - | chr5.3:15076900-15076919 | MS.gene83495:CDS | 20.0% |
| !! | TCAAATAAACCAATTCAAAT+AGG | + | chr5.3:15076114-15076133 | None:intergenic | 20.0% |
| !! | TTAAGCTGTTTATAAAAACA+GGG | - | chr5.3:15076524-15076543 | MS.gene83495:intron | 20.0% |
| !! | TTTCAATACATGGATAAAAA+GGG | + | chr5.3:15076228-15076247 | None:intergenic | 20.0% |
| !!! | TAAGTTTGTTTCTATAACAA+AGG | + | chr5.3:15076489-15076508 | None:intergenic | 20.0% |
| ! | AAGATTAAAGACTAATCAGT+AGG | + | chr5.3:15075987-15076006 | None:intergenic | 25.0% |
| ! | AGATTAAAGACTAATCAGTA+GGG | + | chr5.3:15075986-15076005 | None:intergenic | 25.0% |
| ! | GTTTCAATACATGGATAAAA+AGG | + | chr5.3:15076229-15076248 | None:intergenic | 25.0% |
| ! | TTGAAAATAATCACTAGTCA+GGG | + | chr5.3:15076073-15076092 | None:intergenic | 25.0% |
| ! | TTTGAAAATAATCACTAGTC+AGG | + | chr5.3:15076074-15076093 | None:intergenic | 25.0% |
| !! | TAAACTATCTCTGAAAAACA+TGG | + | chr5.3:15075823-15075842 | None:intergenic | 25.0% |
| !! | TACTTTTGCTTATTTGGAAA+TGG | - | chr5.3:15076735-15076754 | MS.gene83495:intron | 25.0% |
| ATTAAAGACTAATCAGTAGG+GGG | + | chr5.3:15075984-15076003 | None:intergenic | 30.0% | |
| GATTAAAGACTAATCAGTAG+GGG | + | chr5.3:15075985-15076004 | None:intergenic | 30.0% | |
| GCTTATTTGGAAATGGTATA+TGG | - | chr5.3:15076742-15076761 | MS.gene83495:intron | 30.0% | |
| TATCAAGAAAGACAAGCTTT+GGG | - | chr5.3:15076783-15076802 | MS.gene83495:intron | 30.0% | |
| TCTGAAAAACATGGAAATGA+TGG | + | chr5.3:15075814-15075833 | None:intergenic | 30.0% | |
| TTGAGAGAACTTATGAAAAC+AGG | - | chr5.3:15076354-15076373 | MS.gene83495:intron | 30.0% | |
| TTTGATGAACTTGGAAATGA+TGG | + | chr5.3:15075696-15075715 | None:intergenic | 30.0% | |
| !!! | AGGGCCTATATCTTATTTTA+TGG | - | chr5.3:15076543-15076562 | MS.gene83495:intron | 30.0% |
| AAATGGGAAGAATTGAAACC+CGG | + | chr5.3:15075730-15075749 | None:intergenic | 35.0% | |
| AACCAATTCAAATAGGCTCA+TGG | + | chr5.3:15076107-15076126 | None:intergenic | 35.0% | |
| AACCATGAGCCTATTTGAAT+TGG | - | chr5.3:15076102-15076121 | MS.gene83495:intron | 35.0% | |
| ACTGTAGAGTTTGATGAACT+TGG | + | chr5.3:15075705-15075724 | None:intergenic | 35.0% | |
| CAAGTGCTTGTTTCAATACA+TGG | + | chr5.3:15076238-15076257 | None:intergenic | 35.0% | |
| GAGAACATTGATCAAACAGT+TGG | + | chr5.3:15075777-15075796 | None:intergenic | 35.0% | |
| GGATAAACAACTTCATTGAG+TGG | + | chr5.3:15076654-15076673 | None:intergenic | 35.0% | |
| GTATCAAGAAAGACAAGCTT+TGG | - | chr5.3:15076782-15076801 | MS.gene83495:intron | 35.0% | |
| TACAATACACCAACAATGGT+GGG | - | chr5.3:15076154-15076173 | MS.gene83495:intron | 35.0% | |
| TCATCAAACTCTACAGTTTC+CGG | - | chr5.3:15075708-15075727 | MS.gene83495:CDS | 35.0% | |
| TTATTTGAGCTCATATACCC+TGG | - | chr5.3:15076126-15076145 | MS.gene83495:intron | 35.0% | |
| ! | AGCGATAAGCTCTTTTCATA+AGG | + | chr5.3:15076437-15076456 | None:intergenic | 35.0% |
| ! | GGAAATGATGGAAGCAATTT+CGG | + | chr5.3:15075684-15075703 | None:intergenic | 35.0% |
| ! | TCTTTTTCCCTTTCTTCTGT+TGG | + | chr5.3:15076957-15076976 | None:intergenic | 35.0% |
| AATTTGCAAACACTGTTGCG+TGG | - | chr5.3:15076811-15076830 | MS.gene83495:CDS | 40.0% | |
| AGCTTGTCTTTCTTGATACC+AGG | + | chr5.3:15076781-15076800 | None:intergenic | 40.0% | |
| AGTCCCTATCAGTGATTAAG+TGG | + | chr5.3:15076029-15076048 | None:intergenic | 40.0% | |
| AGTGAACTCTGCACTTTCAT+GGG | - | chr5.3:15075638-15075657 | MS.gene83495:CDS | 40.0% | |
| ATTTCGGAACGAGATTGATG+AGG | + | chr5.3:15075668-15075687 | None:intergenic | 40.0% | |
| CAATGGCAACACTCTTACTT+AGG | + | chr5.3:15076684-15076703 | None:intergenic | 40.0% | |
| CACCCACTTAATCACTGATA+GGG | - | chr5.3:15076023-15076042 | MS.gene83495:intron | 40.0% | |
| CACTCTTACTTAGGCTCATT+TGG | + | chr5.3:15076675-15076694 | None:intergenic | 40.0% | |
| CATCAAACTCTACAGTTTCC+GGG | - | chr5.3:15075709-15075728 | MS.gene83495:CDS | 40.0% | |
| CTTTCACTTTAGTCGCTCAA+TGG | + | chr5.3:15076701-15076720 | None:intergenic | 40.0% | |
| GACAGAATCTTAGCAATCTC+AGG | + | chr5.3:15076856-15076875 | None:intergenic | 40.0% | |
| GATTGCTAAGATTCTGTCTC+CGG | - | chr5.3:15076858-15076877 | MS.gene83495:CDS | 40.0% | |
| GTACAATACACCAACAATGG+TGG | - | chr5.3:15076153-15076172 | MS.gene83495:intron | 40.0% | |
| GTCCCTATCAGTGATTAAGT+GGG | + | chr5.3:15076028-15076047 | None:intergenic | 40.0% | |
| TACTAATACGGATTCTTCCG+CGG | - | chr5.3:15076912-15076931 | MS.gene83495:CDS | 40.0% | |
| TCACCCACTTAATCACTGAT+AGG | - | chr5.3:15076022-15076041 | MS.gene83495:intron | 40.0% | |
| TGCGTACAATACACCAACAA+TGG | - | chr5.3:15076150-15076169 | MS.gene83495:intron | 40.0% | |
| TTGAGTGGTTATAGCACAAG+CGG | + | chr5.3:15076639-15076658 | None:intergenic | 40.0% | |
| CAGTGAACTCTGCACTTTCA+TGG | - | chr5.3:15075637-15075656 | MS.gene83495:CDS | 45.0% | |
| CATGGATAAAAAGGGCAACC+CGG | + | chr5.3:15076220-15076239 | None:intergenic | 45.0% | |
| CCAGGGTGCGATTAATATCA+AGG | - | chr5.3:15076888-15076907 | MS.gene83495:CDS | 45.0% | |
| CCTTGATATTAATCGCACCC+TGG | + | chr5.3:15076891-15076910 | None:intergenic | 45.0% | |
| GGAAAGGCCAACAGAAGAAA+GGG | - | chr5.3:15076947-15076966 | MS.gene83495:CDS | 45.0% | |
| TCTTCCGCGGATAACACAAA+GGG | - | chr5.3:15076925-15076944 | MS.gene83495:CDS | 45.0% | |
| TTCTTCCGCGGATAACACAA+AGG | - | chr5.3:15076924-15076943 | MS.gene83495:CDS | 45.0% | |
| TTTCCCCTTTGTGTTATCCG+CGG | + | chr5.3:15076932-15076951 | None:intergenic | 45.0% | |
| TTTGCCGACACCCATGATTT+CGG | + | chr5.3:15075597-15075616 | None:intergenic | 45.0% | |
| ! | CATGAAAGTGCAGAGTTCAC+TGG | + | chr5.3:15075639-15075658 | None:intergenic | 45.0% |
| AAAGCCGTCGCCGAAATCAT+GGG | - | chr5.3:15075584-15075603 | MS.gene83495:CDS | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | + | chr5.3:15076194-15076213 | None:intergenic | 50.0% | |
| CTAAAGCTCCCGCATATGCA+GGG | + | chr5.3:15076193-15076212 | None:intergenic | 50.0% | |
| CTTCCGCGGATAACACAAAG+GGG | - | chr5.3:15076926-15076945 | MS.gene83495:CDS | 50.0% | |
| GCGGATAACACAAAGGGGAA+AGG | - | chr5.3:15076931-15076950 | MS.gene83495:CDS | 50.0% | |
| GGGAAAGGCCAACAGAAGAA+AGG | - | chr5.3:15076946-15076965 | MS.gene83495:CDS | 50.0% | |
| TGGTGTATTGTACGCAGCCA+GGG | + | chr5.3:15076146-15076165 | None:intergenic | 50.0% | |
| TTGGTGTATTGTACGCAGCC+AGG | + | chr5.3:15076147-15076166 | None:intergenic | 50.0% | |
| ! | ACTGGTAGCTTTGCGTGTCT+TGG | + | chr5.3:15075621-15075640 | None:intergenic | 50.0% |
| ! | ATGAATCCGGCGGGTTTAAC+AGG | - | chr5.3:15075536-15075555 | MS.gene83495:CDS | 50.0% |
| ! | TGAATCCGGCGGGTTTAACA+GGG | - | chr5.3:15075537-15075556 | MS.gene83495:CDS | 50.0% |
| !! | TATGGTGTTGTGCAGAGTCC+TGG | - | chr5.3:15076760-15076779 | MS.gene83495:intron | 50.0% |
| ATCGCACCCTGGCTGAATTC+CGG | + | chr5.3:15076880-15076899 | None:intergenic | 55.0% | |
| CAAAGCCGTCGCCGAAATCA+TGG | - | chr5.3:15075583-15075602 | MS.gene83495:CDS | 55.0% | |
| CATGATTTCGGCGACGGCTT+TGG | + | chr5.3:15075585-15075604 | None:intergenic | 55.0% | |
| CTGTCTCCGGAATTCAGCCA+GGG | - | chr5.3:15076871-15076890 | MS.gene83495:CDS | 55.0% | |
| GACACCCATGATTTCGGCGA+CGG | + | chr5.3:15075591-15075610 | None:intergenic | 55.0% | |
| GTCGCCGAAATCATGGGTGT+CGG | - | chr5.3:15075590-15075609 | MS.gene83495:CDS | 55.0% | |
| TCTGTCTCCGGAATTCAGCC+AGG | - | chr5.3:15076870-15076889 | MS.gene83495:CDS | 55.0% | |
| TTGCGTGGCAGAAACAGCGT+TGG | - | chr5.3:15076826-15076845 | MS.gene83495:CDS | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr5.3:15076198-15076217 | MS.gene83495:intron | 55.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr5.3:15076181-15076200 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr5.3:15076181-15076200 | MS.gene83495:intron | 60.0% | |
| CTTCGCCCTGTTAAACCCGC+CGG | + | chr5.3:15075545-15075564 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr5.3:15076182-15076201 | None:intergenic | 60.0% | |
| GGAAGGGGTCCCACCATTGT+TGG | + | chr5.3:15076166-15076185 | None:intergenic | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr5.3:15076182-15076201 | MS.gene83495:intron | 60.0% | |
| ! | ACAATGGTGGGACCCCTTCC+CGG | - | chr5.3:15076166-15076185 | MS.gene83495:intron | 60.0% |
| ! | AGGGCGAAGGAGCATGTCGA+CGG | - | chr5.3:15075556-15075575 | MS.gene83495:CDS | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr5.3:15076199-15076218 | MS.gene83495:intron | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr5.3:15076183-15076202 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr5.3:15076187-15076206 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr5.3:15076188-15076207 | None:intergenic | 65.0% | |
| ! | CGGCGGGTTTAACAGGGCGA+AGG | - | chr5.3:15075543-15075562 | MS.gene83495:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 15075536 | 15076981 | 15075536 | ID=MS.gene83495 |
| chr5.3 | mRNA | 15075536 | 15076981 | 15075536 | ID=MS.gene83495.t1;Parent=MS.gene83495 |
| chr5.3 | exon | 15076787 | 15076981 | 15076787 | ID=MS.gene83495.t1.exon1;Parent=MS.gene83495.t1 |
| chr5.3 | CDS | 15076787 | 15076981 | 15076787 | ID=cds.MS.gene83495.t1;Parent=MS.gene83495.t1 |
| chr5.3 | exon | 15075536 | 15075742 | 15075536 | ID=MS.gene83495.t1.exon2;Parent=MS.gene83495.t1 |
| chr5.3 | CDS | 15075536 | 15075742 | 15075536 | ID=cds.MS.gene83495.t1;Parent=MS.gene83495.t1 |
| Gene Sequence |
| Protein sequence |
