Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87987.t1 | XP_013451581.1 | 94.5 | 382 | 17 | 1 | 16 | 393 | 16 | 397 | 2.90E-177 | 631.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87987.t1 | Q9SQQ9 | 51.0 | 390 | 142 | 9 | 27 | 392 | 30 | 394 | 8.9e-66 | 252.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87987.t1 | A0A072U768 | 94.5 | 382 | 17 | 1 | 16 | 393 | 16 | 397 | 2.1e-177 | 631.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene87987.t1 | TF | GARP-G2-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene87987 | 0.841602 | 4.30E-58 | -1.69E-46 |
| MS.gene049150 | MS.gene87987 | 0.83681 | 7.52E-57 | -1.69E-46 |
| MS.gene049151 | MS.gene87987 | 0.844633 | 6.70E-59 | -1.69E-46 |
| MS.gene049153 | MS.gene87987 | 0.834358 | 3.14E-56 | -1.69E-46 |
| MS.gene049260 | MS.gene87987 | 0.829819 | 4.16E-55 | -1.69E-46 |
| MS.gene049915 | MS.gene87987 | 0.809824 | 1.56E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene87987 | 0.806578 | 7.69E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene87987 | 0.803059 | 4.18E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene87987 | 0.812238 | 4.69E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene87987 | -0.800683 | 1.28E-48 | -1.69E-46 |
| MS.gene050605 | MS.gene87987 | 0.811935 | 5.46E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene87987 | 0.820487 | 6.69E-53 | -1.69E-46 |
| MS.gene050680 | MS.gene87987 | 0.814731 | 1.33E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene87987 | 0.826034 | 3.38E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene87987 | 0.820346 | 7.20E-53 | -1.69E-46 |
| MS.gene052426 | MS.gene87987 | 0.811802 | 5.83E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene87987 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene053074 | MS.gene87987 | 0.801255 | 9.82E-49 | -1.69E-46 |
| MS.gene053184 | MS.gene87987 | 0.821537 | 3.83E-53 | -1.69E-46 |
| MS.gene053494 | MS.gene87987 | 0.810264 | 1.26E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene87987 | 0.803922 | 2.77E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene87987 | 0.830957 | 2.19E-55 | -1.69E-46 |
| MS.gene054185 | MS.gene87987 | 0.834972 | 2.20E-56 | -1.69E-46 |
| MS.gene054433 | MS.gene87987 | 0.804998 | 1.65E-49 | -1.69E-46 |
| MS.gene054542 | MS.gene87987 | 0.842776 | 2.10E-58 | -1.69E-46 |
| MS.gene05510 | MS.gene87987 | 0.820374 | 7.09E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene87987 | 0.806001 | 1.02E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene87987 | 0.835477 | 1.64E-56 | -1.69E-46 |
| MS.gene055701 | MS.gene87987 | 0.813744 | 2.19E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene87987 | 0.814078 | 1.85E-51 | -1.69E-46 |
| MS.gene057394 | MS.gene87987 | 0.832284 | 1.03E-55 | -1.69E-46 |
| MS.gene057395 | MS.gene87987 | 0.815648 | 8.30E-52 | -1.69E-46 |
| MS.gene057690 | MS.gene87987 | 0.806892 | 6.60E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene87987 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene87987 | 0.824958 | 6.09E-54 | -1.69E-46 |
| MS.gene059421 | MS.gene87987 | 0.819654 | 1.04E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene87987 | 0.83272 | 8.05E-56 | -1.69E-46 |
| MS.gene059789 | MS.gene87987 | 0.803134 | 4.03E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene87987 | 0.806849 | 6.74E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene87987 | 0.802349 | 5.85E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene87987 | 0.810295 | 1.24E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene87987 | -0.804235 | 2.38E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87987.t1 | MTR_6g032990 | 94.458 | 397 | 18 | 1 | 1 | 393 | 1 | 397 | 0.0 | 727 |
| MS.gene87987.t1 | MTR_2g086450 | 48.989 | 445 | 118 | 15 | 1 | 392 | 1 | 389 | 1.61e-112 | 334 |
| MS.gene87987.t1 | MTR_5g041350 | 52.821 | 195 | 84 | 3 | 35 | 225 | 8 | 198 | 2.60e-59 | 196 |
| MS.gene87987.t1 | MTR_4g081710 | 51.795 | 195 | 87 | 3 | 35 | 225 | 10 | 201 | 5.05e-57 | 190 |
| MS.gene87987.t1 | MTR_6g444980 | 53.333 | 180 | 69 | 2 | 15 | 194 | 14 | 178 | 2.56e-53 | 181 |
| MS.gene87987.t1 | MTR_5g027440 | 49.490 | 196 | 83 | 3 | 24 | 212 | 7 | 193 | 3.61e-51 | 173 |
| MS.gene87987.t1 | MTR_6g444980 | 54.321 | 162 | 59 | 2 | 15 | 176 | 14 | 160 | 2.59e-47 | 165 |
| MS.gene87987.t1 | MTR_7g088070 | 44.000 | 225 | 110 | 7 | 9 | 228 | 15 | 228 | 6.10e-46 | 159 |
| MS.gene87987.t1 | MTR_7g088070 | 43.111 | 225 | 108 | 7 | 9 | 228 | 15 | 224 | 1.70e-45 | 158 |
| MS.gene87987.t1 | MTR_7g098250 | 49.180 | 183 | 66 | 5 | 4 | 182 | 231 | 390 | 3.17e-43 | 157 |
| MS.gene87987.t1 | MTR_2g027800 | 39.357 | 249 | 126 | 7 | 23 | 254 | 19 | 259 | 1.84e-41 | 148 |
| MS.gene87987.t1 | MTR_2g027800 | 45.198 | 177 | 81 | 4 | 23 | 198 | 19 | 180 | 7.00e-41 | 146 |
| MS.gene87987.t1 | MTR_2g027860 | 48.148 | 162 | 74 | 2 | 27 | 188 | 34 | 185 | 2.14e-40 | 146 |
| MS.gene87987.t1 | MTR_1g080330 | 48.148 | 162 | 58 | 3 | 28 | 182 | 161 | 303 | 5.23e-40 | 146 |
| MS.gene87987.t1 | MTR_1g090670 | 35.766 | 274 | 141 | 7 | 17 | 266 | 24 | 286 | 1.86e-39 | 142 |
| MS.gene87987.t1 | MTR_7g115530 | 48.521 | 169 | 75 | 4 | 41 | 209 | 217 | 373 | 2.61e-39 | 145 |
| MS.gene87987.t1 | MTR_1g053835 | 47.159 | 176 | 75 | 4 | 27 | 198 | 239 | 400 | 1.69e-38 | 143 |
| MS.gene87987.t1 | MTR_7g093030 | 46.309 | 149 | 65 | 3 | 41 | 188 | 211 | 345 | 7.23e-37 | 138 |
| MS.gene87987.t1 | MTR_1g080330 | 48.227 | 141 | 47 | 3 | 28 | 161 | 161 | 282 | 2.15e-32 | 124 |
| MS.gene87987.t1 | MTR_7g115530 | 54.545 | 121 | 43 | 4 | 41 | 161 | 217 | 325 | 7.98e-31 | 120 |
| MS.gene87987.t1 | MTR_7g068600 | 44.138 | 145 | 66 | 3 | 38 | 179 | 9 | 141 | 1.67e-28 | 112 |
| MS.gene87987.t1 | MTR_1g053800 | 37.423 | 163 | 89 | 2 | 30 | 192 | 165 | 314 | 3.87e-26 | 107 |
| MS.gene87987.t1 | MTR_7g115530 | 68.966 | 58 | 18 | 0 | 41 | 98 | 217 | 274 | 4.81e-23 | 98.6 |
| MS.gene87987.t1 | MTR_7g115530 | 68.966 | 58 | 18 | 0 | 41 | 98 | 217 | 274 | 1.85e-22 | 97.8 |
| MS.gene87987.t1 | MTR_7g093030 | 61.667 | 60 | 23 | 0 | 41 | 100 | 211 | 270 | 2.61e-21 | 93.6 |
| MS.gene87987.t1 | MTR_1g053830 | 53.968 | 63 | 29 | 0 | 38 | 100 | 14 | 76 | 1.96e-20 | 85.9 |
| MS.gene87987.t1 | MTR_7g115530 | 69.811 | 53 | 16 | 0 | 41 | 93 | 217 | 269 | 3.05e-20 | 90.1 |
| MS.gene87987.t1 | MTR_7g115530 | 69.231 | 52 | 16 | 0 | 41 | 92 | 217 | 268 | 2.12e-19 | 88.2 |
| MS.gene87987.t1 | MTR_5g041350 | 47.826 | 92 | 48 | 0 | 134 | 225 | 18 | 109 | 1.25e-18 | 85.5 |
| MS.gene87987.t1 | MTR_7g069660 | 47.126 | 87 | 35 | 1 | 20 | 95 | 38 | 124 | 2.87e-18 | 85.9 |
| MS.gene87987.t1 | MTR_2g023580 | 66.038 | 53 | 18 | 0 | 43 | 95 | 56 | 108 | 3.35e-18 | 83.6 |
| MS.gene87987.t1 | MTR_5g041350 | 48.837 | 86 | 44 | 0 | 140 | 225 | 2 | 87 | 8.83e-18 | 82.4 |
| MS.gene87987.t1 | MTR_2g084230 | 54.167 | 72 | 31 | 1 | 24 | 95 | 81 | 150 | 3.83e-17 | 82.0 |
| MS.gene87987.t1 | MTR_2g084230 | 54.167 | 72 | 31 | 1 | 24 | 95 | 81 | 150 | 3.98e-17 | 82.4 |
| MS.gene87987.t1 | MTR_1g112370 | 55.882 | 68 | 30 | 0 | 43 | 110 | 23 | 90 | 8.51e-17 | 81.3 |
| MS.gene87987.t1 | MTR_3g450310 | 52.381 | 63 | 27 | 1 | 42 | 104 | 19 | 78 | 1.92e-16 | 77.8 |
| MS.gene87987.t1 | MTR_0223s0040 | 58.065 | 62 | 23 | 1 | 43 | 104 | 19 | 77 | 2.24e-16 | 79.3 |
| MS.gene87987.t1 | MTR_8g086410 | 62.264 | 53 | 20 | 0 | 43 | 95 | 112 | 164 | 2.49e-16 | 80.5 |
| MS.gene87987.t1 | MTR_8g086410 | 62.264 | 53 | 20 | 0 | 43 | 95 | 110 | 162 | 2.49e-16 | 80.5 |
| MS.gene87987.t1 | MTR_4g021790 | 55.072 | 69 | 29 | 2 | 29 | 96 | 154 | 221 | 2.76e-16 | 79.0 |
| MS.gene87987.t1 | MTR_7g093010 | 35.294 | 136 | 77 | 1 | 41 | 176 | 212 | 336 | 7.68e-16 | 78.6 |
| MS.gene87987.t1 | MTR_1g090670 | 30.876 | 217 | 120 | 6 | 74 | 266 | 1 | 211 | 7.92e-16 | 76.3 |
| MS.gene87987.t1 | MTR_2g016220 | 60.377 | 53 | 21 | 0 | 43 | 95 | 90 | 142 | 2.74e-15 | 77.0 |
| MS.gene87987.t1 | MTR_2g016220 | 60.377 | 53 | 21 | 0 | 43 | 95 | 90 | 142 | 2.79e-15 | 77.0 |
| MS.gene87987.t1 | MTR_8g086410 | 55.172 | 58 | 26 | 0 | 43 | 100 | 112 | 169 | 3.25e-15 | 77.4 |
| MS.gene87987.t1 | MTR_6g071625 | 60.377 | 53 | 21 | 0 | 43 | 95 | 203 | 255 | 7.76e-15 | 75.9 |
| MS.gene87987.t1 | MTR_4g121020 | 42.157 | 102 | 53 | 3 | 38 | 134 | 107 | 207 | 8.49e-15 | 76.3 |
| MS.gene87987.t1 | MTR_4g121020 | 42.157 | 102 | 53 | 3 | 38 | 134 | 211 | 311 | 1.10e-14 | 76.3 |
| MS.gene87987.t1 | MTR_4g121020 | 42.157 | 102 | 53 | 3 | 38 | 134 | 211 | 311 | 1.10e-14 | 76.3 |
| MS.gene87987.t1 | MTR_4g021855 | 53.521 | 71 | 29 | 3 | 42 | 110 | 168 | 236 | 1.14e-14 | 74.3 |
| MS.gene87987.t1 | MTR_5g029470 | 54.237 | 59 | 27 | 0 | 43 | 101 | 220 | 278 | 2.77e-14 | 74.3 |
| MS.gene87987.t1 | MTR_3g064840 | 54.237 | 59 | 27 | 0 | 43 | 101 | 275 | 333 | 3.64e-14 | 74.3 |
| MS.gene87987.t1 | MTR_8g066310 | 60.377 | 53 | 21 | 0 | 43 | 95 | 174 | 226 | 4.30e-14 | 73.2 |
| MS.gene87987.t1 | MTR_1g032570 | 44.578 | 83 | 37 | 2 | 38 | 112 | 127 | 208 | 4.48e-14 | 74.3 |
| MS.gene87987.t1 | MTR_1g021520 | 52.542 | 59 | 28 | 0 | 43 | 101 | 127 | 185 | 4.94e-14 | 72.4 |
| MS.gene87987.t1 | MTR_1g032570 | 44.578 | 83 | 37 | 2 | 38 | 112 | 196 | 277 | 5.01e-14 | 73.9 |
| MS.gene87987.t1 | MTR_2g016220 | 55.172 | 58 | 25 | 1 | 43 | 99 | 90 | 147 | 6.37e-14 | 73.2 |
| MS.gene87987.t1 | MTR_2g450070 | 54.237 | 59 | 26 | 1 | 38 | 96 | 209 | 266 | 9.32e-14 | 73.2 |
| MS.gene87987.t1 | MTR_2g450070 | 54.237 | 59 | 26 | 1 | 38 | 96 | 209 | 266 | 9.48e-14 | 73.2 |
| MS.gene87987.t1 | MTR_2g034960 | 51.667 | 60 | 28 | 1 | 37 | 96 | 206 | 264 | 1.50e-13 | 72.8 |
| MS.gene87987.t1 | MTR_4g021760 | 57.407 | 54 | 22 | 1 | 42 | 95 | 169 | 221 | 1.64e-13 | 71.2 |
| MS.gene87987.t1 | MTR_1g093080 | 48.529 | 68 | 35 | 0 | 42 | 109 | 211 | 278 | 9.74e-13 | 69.3 |
| MS.gene87987.t1 | MTR_4g064730 | 47.222 | 72 | 36 | 2 | 39 | 109 | 128 | 198 | 1.53e-12 | 68.2 |
| MS.gene87987.t1 | MTR_4g113140 | 44.156 | 77 | 42 | 1 | 39 | 114 | 232 | 308 | 1.80e-12 | 68.9 |
| MS.gene87987.t1 | MTR_4g021845 | 56.863 | 51 | 21 | 1 | 42 | 92 | 168 | 217 | 2.38e-12 | 66.2 |
| MS.gene87987.t1 | MTR_4g131600 | 53.333 | 60 | 27 | 1 | 37 | 96 | 196 | 254 | 2.55e-12 | 68.9 |
| MS.gene87987.t1 | MTR_7g089010 | 54.545 | 55 | 24 | 1 | 42 | 96 | 91 | 144 | 3.96e-12 | 67.0 |
| MS.gene87987.t1 | MTR_4g078810 | 54.386 | 57 | 25 | 1 | 42 | 98 | 158 | 213 | 4.30e-12 | 67.8 |
| MS.gene87987.t1 | MTR_1g013170 | 56.364 | 55 | 23 | 1 | 42 | 96 | 191 | 244 | 4.53e-12 | 67.8 |
| MS.gene87987.t1 | MTR_4g086835 | 44.595 | 74 | 40 | 1 | 39 | 111 | 271 | 344 | 4.86e-12 | 67.4 |
| MS.gene87987.t1 | MTR_2g090675 | 54.545 | 55 | 24 | 1 | 44 | 98 | 163 | 216 | 6.05e-12 | 67.0 |
| MS.gene87987.t1 | MTR_7g026400 | 56.364 | 55 | 23 | 1 | 42 | 96 | 157 | 210 | 6.53e-12 | 67.4 |
| MS.gene87987.t1 | MTR_8g079940 | 53.448 | 58 | 26 | 1 | 42 | 99 | 209 | 265 | 1.83e-11 | 65.9 |
| MS.gene87987.t1 | MTR_5g017980 | 52.727 | 55 | 26 | 0 | 42 | 96 | 193 | 247 | 2.31e-11 | 64.7 |
| MS.gene87987.t1 | MTR_3g086100 | 35.398 | 113 | 56 | 3 | 38 | 144 | 124 | 225 | 3.10e-11 | 65.1 |
| MS.gene87987.t1 | MTR_4g131570 | 51.667 | 60 | 28 | 1 | 38 | 97 | 199 | 257 | 3.22e-11 | 65.5 |
| MS.gene87987.t1 | MTR_3g106220 | 49.153 | 59 | 29 | 1 | 38 | 96 | 194 | 251 | 3.85e-11 | 65.1 |
| MS.gene87987.t1 | MTR_3g086100 | 35.398 | 113 | 56 | 3 | 38 | 144 | 195 | 296 | 4.01e-11 | 65.1 |
| MS.gene87987.t1 | MTR_7g117705 | 44.304 | 79 | 38 | 2 | 42 | 115 | 191 | 268 | 6.22e-11 | 64.3 |
| MS.gene87987.t1 | MTR_4g086835 | 44.595 | 74 | 39 | 2 | 39 | 111 | 271 | 343 | 8.65e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87987.t1 | AT3G04030 | 49.409 | 423 | 154 | 12 | 1 | 392 | 1 | 394 | 5.31e-115 | 341 |
| MS.gene87987.t1 | AT3G04030 | 48.936 | 423 | 155 | 13 | 1 | 392 | 1 | 393 | 1.23e-111 | 332 |
| MS.gene87987.t1 | AT5G18240 | 46.824 | 425 | 170 | 9 | 1 | 392 | 1 | 402 | 5.24e-110 | 328 |
| MS.gene87987.t1 | AT5G18240 | 46.824 | 425 | 170 | 9 | 1 | 392 | 1 | 402 | 5.24e-110 | 328 |
| MS.gene87987.t1 | AT3G04030 | 47.991 | 423 | 154 | 13 | 1 | 392 | 1 | 388 | 1.04e-107 | 322 |
| MS.gene87987.t1 | AT5G18240 | 46.353 | 425 | 170 | 10 | 1 | 392 | 1 | 400 | 2.43e-106 | 319 |
| MS.gene87987.t1 | AT5G18240 | 45.412 | 425 | 170 | 10 | 1 | 392 | 1 | 396 | 1.35e-102 | 309 |
| MS.gene87987.t1 | AT5G18240 | 45.412 | 425 | 170 | 10 | 1 | 392 | 1 | 396 | 1.35e-102 | 309 |
| MS.gene87987.t1 | AT3G04030 | 45.773 | 343 | 137 | 9 | 74 | 392 | 1 | 318 | 6.64e-78 | 243 |
| MS.gene87987.t1 | AT3G04030 | 44.023 | 343 | 137 | 10 | 74 | 392 | 1 | 312 | 1.56e-70 | 224 |
| MS.gene87987.t1 | AT5G18240 | 41.329 | 346 | 150 | 7 | 74 | 392 | 1 | 320 | 1.87e-66 | 214 |
| MS.gene87987.t1 | AT1G69580 | 54.762 | 210 | 78 | 4 | 28 | 226 | 20 | 223 | 1.42e-61 | 202 |
| MS.gene87987.t1 | AT1G69580 | 54.502 | 211 | 78 | 4 | 28 | 226 | 20 | 224 | 2.15e-61 | 201 |
| MS.gene87987.t1 | AT4G13640 | 53.723 | 188 | 85 | 2 | 26 | 212 | 21 | 207 | 5.02e-60 | 196 |
| MS.gene87987.t1 | AT3G24120 | 53.403 | 191 | 87 | 2 | 26 | 215 | 25 | 214 | 1.53e-59 | 195 |
| MS.gene87987.t1 | AT4G13640 | 52.880 | 191 | 85 | 3 | 26 | 212 | 21 | 210 | 5.15e-58 | 191 |
| MS.gene87987.t1 | AT3G24120 | 52.577 | 194 | 87 | 3 | 26 | 215 | 25 | 217 | 2.13e-57 | 190 |
| MS.gene87987.t1 | AT1G79430 | 55.090 | 167 | 54 | 3 | 32 | 192 | 24 | 175 | 1.90e-51 | 176 |
| MS.gene87987.t1 | AT5G45580 | 48.045 | 179 | 77 | 2 | 26 | 193 | 7 | 180 | 9.48e-47 | 161 |
| MS.gene87987.t1 | AT5G45580 | 48.521 | 169 | 71 | 2 | 36 | 193 | 1 | 164 | 2.27e-44 | 155 |
| MS.gene87987.t1 | AT2G01060 | 49.693 | 163 | 64 | 4 | 41 | 202 | 14 | 159 | 3.98e-42 | 149 |
| MS.gene87987.t1 | AT3G12730 | 50.000 | 158 | 71 | 3 | 31 | 186 | 12 | 163 | 1.27e-41 | 147 |
| MS.gene87987.t1 | AT5G29000 | 50.704 | 142 | 61 | 2 | 41 | 182 | 187 | 319 | 1.18e-39 | 145 |
| MS.gene87987.t1 | AT5G29000 | 50.704 | 142 | 61 | 2 | 41 | 182 | 187 | 319 | 1.18e-39 | 145 |
| MS.gene87987.t1 | AT4G28610 | 52.113 | 142 | 57 | 2 | 41 | 182 | 224 | 354 | 1.32e-39 | 146 |
| MS.gene87987.t1 | AT5G29000 | 50.704 | 142 | 61 | 2 | 41 | 182 | 230 | 362 | 2.39e-39 | 145 |
| MS.gene87987.t1 | AT3G04450 | 44.379 | 169 | 82 | 3 | 14 | 182 | 173 | 329 | 1.39e-38 | 143 |
| MS.gene87987.t1 | AT3G04450 | 44.379 | 169 | 82 | 3 | 14 | 182 | 173 | 329 | 1.39e-38 | 143 |
| MS.gene87987.t1 | AT3G04450 | 44.379 | 169 | 82 | 3 | 14 | 182 | 213 | 369 | 2.96e-38 | 143 |
| MS.gene87987.t1 | AT5G06800 | 41.667 | 216 | 102 | 6 | 6 | 218 | 163 | 357 | 1.84e-37 | 139 |
| MS.gene87987.t1 | AT5G06800 | 44.444 | 180 | 78 | 4 | 42 | 218 | 192 | 352 | 4.13e-37 | 138 |
| MS.gene87987.t1 | AT3G13040 | 47.973 | 148 | 69 | 2 | 42 | 189 | 241 | 380 | 7.99e-34 | 131 |
| MS.gene87987.t1 | AT3G13040 | 47.973 | 148 | 69 | 2 | 42 | 189 | 241 | 380 | 7.99e-34 | 131 |
| MS.gene87987.t1 | AT3G13040 | 47.973 | 148 | 69 | 2 | 42 | 189 | 241 | 380 | 7.99e-34 | 131 |
| MS.gene87987.t1 | AT2G20400 | 45.752 | 153 | 65 | 3 | 44 | 196 | 233 | 367 | 2.17e-33 | 129 |
| MS.gene87987.t1 | AT2G20400 | 45.752 | 153 | 64 | 4 | 44 | 196 | 233 | 366 | 1.12e-31 | 124 |
| MS.gene87987.t1 | AT1G79430 | 48.000 | 125 | 44 | 3 | 74 | 192 | 1 | 110 | 5.21e-25 | 103 |
| MS.gene87987.t1 | AT2G01060 | 45.669 | 127 | 51 | 4 | 77 | 202 | 1 | 110 | 1.22e-23 | 99.0 |
| MS.gene87987.t1 | AT3G04450 | 52.941 | 85 | 37 | 1 | 14 | 98 | 213 | 294 | 3.23e-23 | 99.4 |
| MS.gene87987.t1 | AT5G29000 | 68.966 | 58 | 18 | 0 | 41 | 98 | 230 | 287 | 1.63e-22 | 97.4 |
| MS.gene87987.t1 | AT5G06800 | 47.368 | 95 | 43 | 1 | 6 | 100 | 163 | 250 | 1.16e-21 | 94.4 |
| MS.gene87987.t1 | AT2G06020 | 46.988 | 83 | 40 | 2 | 27 | 105 | 68 | 150 | 1.01e-17 | 83.6 |
| MS.gene87987.t1 | AT1G14600 | 64.286 | 56 | 20 | 0 | 43 | 98 | 24 | 79 | 1.37e-17 | 82.4 |
| MS.gene87987.t1 | AT2G42660 | 62.264 | 53 | 20 | 0 | 43 | 95 | 51 | 103 | 3.34e-17 | 81.3 |
| MS.gene87987.t1 | AT4G04605 | 62.264 | 53 | 20 | 0 | 43 | 95 | 15 | 67 | 5.51e-17 | 79.7 |
| MS.gene87987.t1 | AT3G12730 | 39.831 | 118 | 57 | 2 | 74 | 186 | 1 | 109 | 8.45e-17 | 78.2 |
| MS.gene87987.t1 | AT2G02060 | 64.151 | 53 | 19 | 0 | 43 | 95 | 30 | 82 | 9.72e-17 | 79.7 |
| MS.gene87987.t1 | AT2G02060 | 64.151 | 53 | 19 | 0 | 43 | 95 | 30 | 82 | 9.72e-17 | 79.7 |
| MS.gene87987.t1 | AT2G38300 | 62.264 | 53 | 20 | 0 | 43 | 95 | 55 | 107 | 1.11e-16 | 80.9 |
| MS.gene87987.t1 | AT2G40260 | 62.264 | 53 | 20 | 0 | 43 | 95 | 83 | 135 | 2.37e-16 | 80.5 |
| MS.gene87987.t1 | AT5G42630 | 41.071 | 112 | 59 | 4 | 2 | 112 | 69 | 174 | 1.11e-15 | 76.3 |
| MS.gene87987.t1 | AT5G42630 | 41.071 | 112 | 59 | 4 | 2 | 112 | 69 | 174 | 3.25e-15 | 75.9 |
| MS.gene87987.t1 | AT5G16560 | 55.932 | 59 | 26 | 0 | 43 | 101 | 220 | 278 | 3.31e-15 | 77.0 |
| MS.gene87987.t1 | AT4G04580 | 56.604 | 53 | 23 | 0 | 43 | 95 | 15 | 67 | 5.46e-15 | 72.8 |
| MS.gene87987.t1 | AT1G32240 | 37.168 | 113 | 51 | 3 | 2 | 111 | 188 | 283 | 1.24e-14 | 75.1 |
| MS.gene87987.t1 | AT1G32240 | 48.571 | 70 | 35 | 1 | 43 | 111 | 214 | 283 | 1.27e-14 | 75.1 |
| MS.gene87987.t1 | AT4G17695 | 50.704 | 71 | 34 | 1 | 43 | 112 | 165 | 235 | 1.55e-14 | 74.3 |
| MS.gene87987.t1 | AT3G46640 | 45.556 | 90 | 45 | 3 | 21 | 109 | 125 | 211 | 4.03e-14 | 73.2 |
| MS.gene87987.t1 | AT3G16857 | 58.182 | 55 | 22 | 1 | 42 | 96 | 167 | 220 | 6.01e-14 | 73.9 |
| MS.gene87987.t1 | AT3G16857 | 58.182 | 55 | 22 | 1 | 42 | 96 | 237 | 290 | 6.25e-14 | 73.9 |
| MS.gene87987.t1 | AT3G46640 | 45.556 | 90 | 45 | 3 | 21 | 109 | 125 | 211 | 6.47e-14 | 72.4 |
| MS.gene87987.t1 | AT3G46640 | 45.556 | 90 | 45 | 3 | 21 | 109 | 125 | 211 | 6.47e-14 | 72.4 |
| MS.gene87987.t1 | AT3G16857 | 58.182 | 55 | 22 | 1 | 42 | 96 | 237 | 290 | 7.02e-14 | 73.9 |
| MS.gene87987.t1 | AT2G40970 | 46.753 | 77 | 35 | 2 | 25 | 96 | 83 | 158 | 5.81e-13 | 68.6 |
| MS.gene87987.t1 | AT5G59570 | 51.724 | 58 | 27 | 1 | 39 | 96 | 138 | 194 | 1.02e-12 | 68.6 |
| MS.gene87987.t1 | AT5G59570 | 51.724 | 58 | 27 | 1 | 39 | 96 | 138 | 194 | 1.02e-12 | 68.6 |
| MS.gene87987.t1 | AT3G10760 | 44.048 | 84 | 45 | 2 | 42 | 124 | 105 | 187 | 1.09e-12 | 68.9 |
| MS.gene87987.t1 | AT5G05090 | 54.545 | 55 | 24 | 1 | 42 | 96 | 81 | 134 | 1.23e-12 | 68.2 |
| MS.gene87987.t1 | AT2G03500 | 51.724 | 58 | 28 | 0 | 39 | 96 | 230 | 287 | 3.21e-12 | 68.2 |
| MS.gene87987.t1 | AT5G58080 | 51.471 | 68 | 32 | 1 | 29 | 96 | 181 | 247 | 3.62e-12 | 68.6 |
| MS.gene87987.t1 | AT2G20570 | 56.140 | 57 | 24 | 1 | 42 | 98 | 153 | 208 | 4.82e-12 | 67.4 |
| MS.gene87987.t1 | AT2G20570 | 56.364 | 55 | 23 | 1 | 44 | 98 | 171 | 224 | 5.52e-12 | 67.4 |
| MS.gene87987.t1 | AT2G01760 | 50.909 | 55 | 26 | 1 | 42 | 96 | 135 | 188 | 7.59e-12 | 66.2 |
| MS.gene87987.t1 | AT1G25550 | 51.724 | 58 | 28 | 0 | 39 | 96 | 206 | 263 | 7.67e-12 | 66.6 |
| MS.gene87987.t1 | AT5G44190 | 50.877 | 57 | 27 | 1 | 42 | 98 | 147 | 202 | 8.19e-12 | 66.6 |
| MS.gene87987.t1 | AT5G44190 | 50.877 | 57 | 27 | 1 | 42 | 98 | 147 | 202 | 1.07e-11 | 66.2 |
| MS.gene87987.t1 | AT2G01760 | 50.909 | 55 | 26 | 1 | 42 | 96 | 200 | 253 | 1.27e-11 | 66.2 |
| MS.gene87987.t1 | AT2G01760 | 50.909 | 55 | 26 | 1 | 42 | 96 | 228 | 281 | 1.88e-11 | 65.9 |
| MS.gene87987.t1 | AT3G62670 | 50.000 | 62 | 27 | 1 | 38 | 95 | 207 | 268 | 2.56e-11 | 65.5 |
| MS.gene87987.t1 | AT5G45580 | 35.652 | 115 | 58 | 2 | 90 | 193 | 16 | 125 | 3.07e-11 | 63.2 |
| MS.gene87987.t1 | AT5G07210 | 46.377 | 69 | 35 | 2 | 29 | 96 | 216 | 283 | 6.32e-11 | 64.7 |
| MS.gene87987.t1 | AT5G07210 | 46.377 | 69 | 35 | 2 | 29 | 96 | 208 | 275 | 6.50e-11 | 64.3 |
| MS.gene87987.t1 | AT4G04555 | 49.057 | 53 | 27 | 0 | 43 | 95 | 15 | 67 | 6.55e-11 | 59.3 |
Find 67 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCCTTGTTATGTATTTCT+TGG | 0.160531 | 6.1:+11581330 | None:intergenic |
| CAAGGAACATGCATGCTTTA+AGG | 0.246102 | 6.1:-11583439 | MS.gene87987:CDS |
| TTCATGAAGAAGAAAACTTT+TGG | 0.259021 | 6.1:-11581062 | MS.gene87987:CDS |
| CATAACAAGGGCATGAATTA+TGG | 0.265019 | 6.1:-11581320 | MS.gene87987:CDS |
| CCTGTAGATGACTCTTTAAA+TGG | 0.268102 | 6.1:+11583019 | None:intergenic |
| AAGAGACTTGACGTCCTTTC+TGG | 0.283871 | 6.1:+11581102 | None:intergenic |
| ATGCTAAGCCAAGACTAAAA+TGG | 0.303611 | 6.1:-11583358 | MS.gene87987:CDS |
| ATTGTTCTTACTTGTTTGTT+TGG | 0.311419 | 6.1:+11582511 | None:intergenic |
| AATACTGGCAGCAGTAAAAT+TGG | 0.320029 | 6.1:-11582746 | MS.gene87987:intron |
| ATGAATTATGGAGCTTATAA+TGG | 0.338954 | 6.1:-11581308 | MS.gene87987:CDS |
| TTTCTTGATGGCAGAAATAC+AGG | 0.364378 | 6.1:-11582796 | MS.gene87987:intron |
| ACACTAGGAAGACAAAATTT+AGG | 0.366651 | 6.1:-11581545 | MS.gene87987:CDS |
| GAAACCATTGATTATTCAAT+GGG | 0.380276 | 6.1:-11581389 | MS.gene87987:CDS |
| TATTACAAAGGAAGATTTAG+AGG | 0.380797 | 6.1:-11581031 | MS.gene87987:CDS |
| TCTTTGAGAGTCCTCACTAT+TGG | 0.388306 | 6.1:+11581355 | None:intergenic |
| TTGAAACTTATGGGAATTCC+TGG | 0.388557 | 6.1:-11583054 | MS.gene87987:CDS |
| GGAAATGGAAGTTCAGATTC+AGG | 0.388688 | 6.1:-11583398 | MS.gene87987:CDS |
| GTTCTGAAAATTTAAAATCA+AGG | 0.401492 | 6.1:+11581456 | None:intergenic |
| CACATGCAAGGAGGAGGAAA+TGG | 0.404031 | 6.1:-11583413 | MS.gene87987:CDS |
| ATGAATGGACAAACAAATAC+TGG | 0.416324 | 6.1:-11582761 | MS.gene87987:CDS |
| ATCAAATGATAAAGTACTAA+AGG | 0.422241 | 6.1:-11581240 | MS.gene87987:CDS |
| CCTTCACTTCTTCACACAAT+GGG | 0.422809 | 6.1:+11581285 | None:intergenic |
| AAGACAAAATTTAGGAGCTA+TGG | 0.425889 | 6.1:-11581537 | MS.gene87987:CDS |
| TGAAACCATTGATTATTCAA+TGG | 0.427403 | 6.1:-11581390 | MS.gene87987:CDS |
| TTGACTTGAATGGTTTCAGC+TGG | 0.431912 | 6.1:-11580849 | MS.gene87987:CDS |
| GTCCTTTCTGGTACTTCATC+CGG | 0.441823 | 6.1:+11581114 | None:intergenic |
| TCAAATGATAAAGTACTAAA+GGG | 0.461053 | 6.1:-11581239 | MS.gene87987:intron |
| ATGAAACGTTCATGAAGATC+TGG | 0.465503 | 6.1:+11583332 | None:intergenic |
| AAAGGAAGATTTAGAGGGTG+AGG | 0.471041 | 6.1:-11581025 | MS.gene87987:CDS |
| TAAAAGAAATGAATGTACTT+TGG | 0.477579 | 6.1:-11581433 | MS.gene87987:CDS |
| ACTCCCCATTGAATAATCAA+TGG | 0.486204 | 6.1:+11581385 | None:intergenic |
| AAGAAGCACCATTGTCATCA+TGG | 0.491000 | 6.1:+11580887 | None:intergenic |
| AGGATCAGTAGAAGCATGAA+TGG | 0.507423 | 6.1:-11582776 | MS.gene87987:CDS |
| ACACTTACAACTACGAATAG+AGG | 0.508720 | 6.1:-11581612 | MS.gene87987:CDS |
| ATTGAAGCAGTCAATCAACT+TGG | 0.511257 | 6.1:-11583311 | MS.gene87987:CDS |
| TTTAAAATCAAGGCTTTCAG+TGG | 0.511406 | 6.1:+11581466 | None:intergenic |
| TCACCTTCTTGTGTTTGTTG+AGG | 0.515103 | 6.1:+11581410 | None:intergenic |
| AAGATTTAGAGGGTGAGGAA+TGG | 0.517235 | 6.1:-11581020 | MS.gene87987:CDS |
| CATATGAAAGATTTAAGCAT+AGG | 0.525890 | 6.1:-11582537 | MS.gene87987:CDS |
| CCATTTAAAGAGTCATCTAC+AGG | 0.530254 | 6.1:-11583019 | MS.gene87987:intron |
| AGACAAAATTTAGGAGCTAT+GGG | 0.535664 | 6.1:-11581536 | MS.gene87987:CDS |
| TCCTTCACTTCTTCACACAA+TGG | 0.537283 | 6.1:+11581284 | None:intergenic |
| AAATGGTATAATGTAAGTCC+AGG | 0.549657 | 6.1:+11583036 | None:intergenic |
| CAACTACGAATAGAGGCTCA+AGG | 0.553992 | 6.1:-11581605 | MS.gene87987:CDS |
| AGTCTCTTGTCTATGAACAT+AGG | 0.562654 | 6.1:-11581087 | MS.gene87987:CDS |
| TAGTACTTTATCATTTGATG+AGG | 0.567615 | 6.1:+11581244 | None:intergenic |
| GCTGATGTTGCTGATGATGA+TGG | 0.568202 | 6.1:+11583468 | None:intergenic |
| GAAGCAGTCAATCAACTTGG+AGG | 0.572703 | 6.1:-11583308 | MS.gene87987:CDS |
| AGCAGAATGTCAGAATCAAG+TGG | 0.575801 | 6.1:-11582564 | MS.gene87987:CDS |
| AGAAGCACCATTGTCATCAT+GGG | 0.577045 | 6.1:+11580888 | None:intergenic |
| AGGATGCACATGCAAGGAGG+AGG | 0.577430 | 6.1:-11583419 | MS.gene87987:CDS |
| TATGGGACTTGATGCTGCAA+AGG | 0.581623 | 6.1:-11581519 | MS.gene87987:CDS |
| ATTACAAAGGAAGATTTAGA+GGG | 0.583154 | 6.1:-11581030 | MS.gene87987:CDS |
| AGTACTTTATCATTTGATGA+GGG | 0.589703 | 6.1:+11581245 | None:intergenic |
| AGACCAAGAAATACATAACA+AGG | 0.589922 | 6.1:-11581333 | MS.gene87987:CDS |
| TGGCCTCAACAAACACAAGA+AGG | 0.602378 | 6.1:-11581413 | MS.gene87987:CDS |
| AGCAACATCAGCAACAAGCA+AGG | 0.613902 | 6.1:-11583457 | MS.gene87987:CDS |
| CCCATTGTGTGAAGAAGTGA+AGG | 0.616973 | 6.1:-11581285 | MS.gene87987:CDS |
| GCTTTAAGGATGCACATGCA+AGG | 0.621046 | 6.1:-11583425 | MS.gene87987:CDS |
| AAGATTACATGAGCAGCTTG+AGG | 0.632899 | 6.1:-11582347 | MS.gene87987:intron |
| AACTACGAATAGAGGCTCAA+GGG | 0.640142 | 6.1:-11581604 | MS.gene87987:CDS |
| GAGTTTCTTAACCAATAGTG+AGG | 0.644446 | 6.1:-11581366 | MS.gene87987:CDS |
| GACCGGATGAAGTACCAGAA+AGG | 0.645035 | 6.1:-11581116 | MS.gene87987:CDS |
| GACCAAGAAATACATAACAA+GGG | 0.647897 | 6.1:-11581332 | MS.gene87987:CDS |
| TTGAATTCCCATGATGACAA+TGG | 0.705519 | 6.1:-11580895 | MS.gene87987:CDS |
| AAACCATTGATTATTCAATG+GGG | 0.713201 | 6.1:-11581388 | MS.gene87987:CDS |
| TTAAGGATGCACATGCAAGG+AGG | 0.740458 | 6.1:-11583422 | MS.gene87987:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAATAATAATTGTGA+CGG | + | chr6.1:11582636-11582655 | None:intergenic | 10.0% |
| !! | AATTTGTACATATATAATTT+AGG | + | chr6.1:11581057-11581076 | None:intergenic | 10.0% |
| !! | GTATAAATACAAATATAAAA+GGG | + | chr6.1:11581344-11581363 | None:intergenic | 10.0% |
| !! | GGTATAAATACAAATATAAA+AGG | + | chr6.1:11581345-11581364 | None:intergenic | 15.0% |
| !!! | CTTTTATATTTTGAACAAAA+TGG | + | chr6.1:11581851-11581870 | None:intergenic | 15.0% |
| !!! | GTCTTTTATTTCTTATAAAT+AGG | - | chr6.1:11583178-11583197 | MS.gene87987:intron | 15.0% |
| !!! | TTATGAAGTGATTTAAAATT+TGG | + | chr6.1:11582513-11582532 | None:intergenic | 15.0% |
| !! | AGAATAAGAGAAATAGAAAA+GGG | + | chr6.1:11582247-11582266 | None:intergenic | 20.0% |
| !! | CAAAAATGATCAATGATTTA+CGG | - | chr6.1:11582217-11582236 | MS.gene87987:intron | 20.0% |
| !! | CTTAAAGGTTATATAAATGA+TGG | + | chr6.1:11581132-11581151 | None:intergenic | 20.0% |
| !! | TAAAAGAAATGAATGTACTT+TGG | - | chr6.1:11582883-11582902 | MS.gene87987:intron | 20.0% |
| !! | TAGAATAAGAGAAATAGAAA+AGG | + | chr6.1:11582248-11582267 | None:intergenic | 20.0% |
| !! | TGAAAAGTAGTAAAAATAGA+TGG | + | chr6.1:11581446-11581465 | None:intergenic | 20.0% |
| !! | TTACAATTACAAATGATTGT+CGG | + | chr6.1:11582469-11582488 | None:intergenic | 20.0% |
| !! | TTCATTTATATCTGAATTTC+TGG | + | chr6.1:11581920-11581939 | None:intergenic | 20.0% |
| !!! | AAAAACAGTTTTGAAACTTA+TGG | - | chr6.1:11581252-11581271 | MS.gene87987:CDS | 20.0% |
| !!! | AAAACAGTTTTGAAACTTAT+GGG | - | chr6.1:11581253-11581272 | MS.gene87987:CDS | 20.0% |
| !!! | ATAAGTTTCAAAACTGTTTT+TGG | + | chr6.1:11581253-11581272 | None:intergenic | 20.0% |
| !!! | ATCAAATGATAAAGTACTAA+AGG | - | chr6.1:11583076-11583095 | MS.gene87987:CDS | 20.0% |
| !!! | GTTCTGAAAATTTAAAATCA+AGG | + | chr6.1:11582863-11582882 | None:intergenic | 20.0% |
| !!! | TCAAATGATAAAGTACTAAA+GGG | - | chr6.1:11583077-11583096 | MS.gene87987:CDS | 20.0% |
| !!! | TTATTGATTTACTTTCTTGA+TGG | - | chr6.1:11581508-11581527 | MS.gene87987:CDS | 20.0% |
| !!! | TTATTTCTTATAAATAGGAC+CGG | - | chr6.1:11583183-11583202 | MS.gene87987:intron | 20.0% |
| !!! | TTCATATTTTTGAGTTTGTA+TGG | - | chr6.1:11581462-11581481 | MS.gene87987:CDS | 20.0% |
| !!! | TTTTCAAGATCTAATCTAAA+AGG | + | chr6.1:11582094-11582113 | None:intergenic | 20.0% |
| !!! | TTTTGATCCTAATATAATTG+AGG | - | chr6.1:11582608-11582627 | MS.gene87987:intron | 20.0% |
| ! | AAAGAATATTCTCTAATGTG+AGG | - | chr6.1:11581867-11581886 | MS.gene87987:intron | 25.0% |
| ! | ACTTTAAGCATCAATCTTAA+AGG | + | chr6.1:11581147-11581166 | None:intergenic | 25.0% |
| ! | AGTACTTTATCATTTGATGA+GGG | + | chr6.1:11583074-11583093 | None:intergenic | 25.0% |
| ! | ATGAATTATGGAGCTTATAA+TGG | - | chr6.1:11583008-11583027 | MS.gene87987:intron | 25.0% |
| ! | ATTACAAAGGAAGATTTAGA+GGG | - | chr6.1:11583286-11583305 | MS.gene87987:intron | 25.0% |
| ! | ATTGTTCTTACTTGTTTGTT+TGG | + | chr6.1:11581808-11581827 | None:intergenic | 25.0% |
| ! | CATATGAAAGATTTAAGCAT+AGG | - | chr6.1:11581779-11581798 | MS.gene87987:intron | 25.0% |
| ! | CTTAAAGTGTAAAACATCTT+TGG | - | chr6.1:11581159-11581178 | MS.gene87987:intron | 25.0% |
| ! | GATTTGAATAATCCTCAATT+TGG | - | chr6.1:11582057-11582076 | MS.gene87987:intron | 25.0% |
| ! | GTTAAAAAATCACTGTACTA+TGG | + | chr6.1:11582301-11582320 | None:intergenic | 25.0% |
| ! | TAGTACTTTATCATTTGATG+AGG | + | chr6.1:11583075-11583094 | None:intergenic | 25.0% |
| ! | TATTACAAAGGAAGATTTAG+AGG | - | chr6.1:11583285-11583304 | MS.gene87987:intron | 25.0% |
| ! | TATTCTTCTTATGAAAGACA+TGG | + | chr6.1:11581640-11581659 | None:intergenic | 25.0% |
| !! | AAACCATTGATTATTCAATG+GGG | - | chr6.1:11582928-11582947 | MS.gene87987:intron | 25.0% |
| !! | AACCATTCAAGTCAAATTTT+TGG | + | chr6.1:11583462-11583481 | None:intergenic | 25.0% |
| !! | GAAACCATTGATTATTCAAT+GGG | - | chr6.1:11582927-11582946 | MS.gene87987:intron | 25.0% |
| !! | GAAATTTGTCGATTATCAAT+AGG | + | chr6.1:11583124-11583143 | None:intergenic | 25.0% |
| !! | TCATGAAGAAGAAAACTTTT+GGG | - | chr6.1:11583255-11583274 | MS.gene87987:intron | 25.0% |
| !! | TGAAACCATTGATTATTCAA+TGG | - | chr6.1:11582926-11582945 | MS.gene87987:intron | 25.0% |
| !! | TTCATGAAGAAGAAAACTTT+TGG | - | chr6.1:11583254-11583273 | MS.gene87987:intron | 25.0% |
| !!! | AAACTTCACTACATTTTGAT+GGG | + | chr6.1:11582545-11582564 | None:intergenic | 25.0% |
| !!! | ATATAAATGATGGATCACAT+TGG | + | chr6.1:11581122-11581141 | None:intergenic | 25.0% |
| AAATGGTATAATGTAAGTCC+AGG | + | chr6.1:11581283-11581302 | None:intergenic | 30.0% | |
| AAGACAAAATTTAGGAGCTA+TGG | - | chr6.1:11582779-11582798 | MS.gene87987:CDS | 30.0% | |
| ACACTAGGAAGACAAAATTT+AGG | - | chr6.1:11582771-11582790 | MS.gene87987:CDS | 30.0% | |
| AGACAAAATTTAGGAGCTAT+GGG | - | chr6.1:11582780-11582799 | MS.gene87987:CDS | 30.0% | |
| AGACCAAGAAATACATAACA+AGG | - | chr6.1:11582983-11583002 | MS.gene87987:intron | 30.0% | |
| ATGAATGGACAAACAAATAC+TGG | - | chr6.1:11581555-11581574 | MS.gene87987:CDS | 30.0% | |
| ATTTGAACTAAAATGACCGA+TGG | + | chr6.1:11582152-11582171 | None:intergenic | 30.0% | |
| CTAATCTAAAAGGTCCTATA+GGG | + | chr6.1:11582084-11582103 | None:intergenic | 30.0% | |
| GAAGATGATCCAAATCTATT+AGG | + | chr6.1:11582279-11582298 | None:intergenic | 30.0% | |
| GACCAAGAAATACATAACAA+GGG | - | chr6.1:11582984-11583003 | MS.gene87987:intron | 30.0% | |
| GAGTTTGTATGGTTATTTGA+AGG | - | chr6.1:11581473-11581492 | MS.gene87987:CDS | 30.0% | |
| TAATCTAAAAGGTCCTATAG+GGG | + | chr6.1:11582083-11582102 | None:intergenic | 30.0% | |
| TCGTTGAAATTGTAAACCAT+CGG | - | chr6.1:11582133-11582152 | MS.gene87987:intron | 30.0% | |
| TCTAATCTAAAAGGTCCTAT+AGG | + | chr6.1:11582085-11582104 | None:intergenic | 30.0% | |
| ! | ATGAAGAAGAAAACTTTTGG+GGG | - | chr6.1:11583257-11583276 | MS.gene87987:intron | 30.0% |
| ! | CAAACTTCACTACATTTTGA+TGG | + | chr6.1:11582546-11582565 | None:intergenic | 30.0% |
| ! | CATGAAGAAGAAAACTTTTG+GGG | - | chr6.1:11583256-11583275 | MS.gene87987:intron | 30.0% |
| ! | TTTAAAATCAAGGCTTTCAG+TGG | + | chr6.1:11582853-11582872 | None:intergenic | 30.0% |
| !! | AATTAATTTTGACGCACTGT+CGG | - | chr6.1:11581073-11581092 | MS.gene87987:CDS | 30.0% |
| !! | AGCCAAAAATTTGACTTGAA+TGG | - | chr6.1:11583457-11583476 | MS.gene87987:CDS | 30.0% |
| AACAATGTCTGACTACTTCT+AGG | - | chr6.1:11582413-11582432 | MS.gene87987:intron | 35.0% | |
| AATACTGGCAGCAGTAAAAT+TGG | - | chr6.1:11581570-11581589 | MS.gene87987:CDS | 35.0% | |
| ACACTTACAACTACGAATAG+AGG | - | chr6.1:11582704-11582723 | MS.gene87987:intron | 35.0% | |
| ACTCCCCATTGAATAATCAA+TGG | + | chr6.1:11582934-11582953 | None:intergenic | 35.0% | |
| AGAAGTAGTCAGACATTGTT+AGG | + | chr6.1:11582413-11582432 | None:intergenic | 35.0% | |
| AGACAACATATTACTGCATG+TGG | - | chr6.1:11582323-11582342 | MS.gene87987:intron | 35.0% | |
| AGTCTCTTGTCTATGAACAT+AGG | - | chr6.1:11583229-11583248 | MS.gene87987:intron | 35.0% | |
| ATGAAACGTTCATGAAGATC+TGG | + | chr6.1:11580987-11581006 | None:intergenic | 35.0% | |
| ATGCGCTAACCTAATAGATT+TGG | - | chr6.1:11582267-11582286 | MS.gene87987:intron | 35.0% | |
| ATGCTAAGCCAAGACTAAAA+TGG | - | chr6.1:11580958-11580977 | MS.gene87987:CDS | 35.0% | |
| ATTGAAGCAGTCAATCAACT+TGG | - | chr6.1:11581005-11581024 | MS.gene87987:CDS | 35.0% | |
| CCATTTAAAGAGTCATCTAC+AGG | - | chr6.1:11581297-11581316 | MS.gene87987:CDS | 35.0% | |
| CCTGTAGATGACTCTTTAAA+TGG | + | chr6.1:11581300-11581319 | None:intergenic | 35.0% | |
| CGATTATCAATAGGACATGA+GGG | + | chr6.1:11583115-11583134 | None:intergenic | 35.0% | |
| GAAAAAGCTAAGGAAACACT+AGG | - | chr6.1:11582756-11582775 | MS.gene87987:CDS | 35.0% | |
| GAGTTTCTTAACCAATAGTG+AGG | - | chr6.1:11582950-11582969 | MS.gene87987:intron | 35.0% | |
| TCGATTATCAATAGGACATG+AGG | + | chr6.1:11583116-11583135 | None:intergenic | 35.0% | |
| TTGAAACTTATGGGAATTCC+TGG | - | chr6.1:11581262-11581281 | MS.gene87987:CDS | 35.0% | |
| TTGAATTCCCATGATGACAA+TGG | - | chr6.1:11583421-11583440 | MS.gene87987:CDS | 35.0% | |
| TTGGGGGAGAAATATTACAA+AGG | - | chr6.1:11583273-11583292 | MS.gene87987:intron | 35.0% | |
| ! | CATAACAAGGGCATGAATTA+TGG | - | chr6.1:11582996-11583015 | MS.gene87987:intron | 35.0% |
| ! | TGCCCTTGTTATGTATTTCT+TGG | + | chr6.1:11582989-11583008 | None:intergenic | 35.0% |
| ! | TTTCTTGATGGCAGAAATAC+AGG | - | chr6.1:11581520-11581539 | MS.gene87987:CDS | 35.0% |
| !! | AGAAAAAGTGCTGAATCTAG+TGG | - | chr6.1:11583325-11583344 | MS.gene87987:CDS | 35.0% |
| AAAGGAAGATTTAGAGGGTG+AGG | - | chr6.1:11583291-11583310 | MS.gene87987:intron | 40.0% | |
| AACTACGAATAGAGGCTCAA+GGG | - | chr6.1:11582712-11582731 | MS.gene87987:intron | 40.0% | |
| AAGATTACATGAGCAGCTTG+AGG | - | chr6.1:11581969-11581988 | MS.gene87987:intron | 40.0% | |
| AAGATTTAGAGGGTGAGGAA+TGG | - | chr6.1:11583296-11583315 | MS.gene87987:intron | 40.0% | |
| ACCTAAATGCGTCTTTAAGC+AGG | - | chr6.1:11582674-11582693 | MS.gene87987:intron | 40.0% | |
| ACCTGCTTAAAGACGCATTT+AGG | + | chr6.1:11582678-11582697 | None:intergenic | 40.0% | |
| AGCAGAATGTCAGAATCAAG+TGG | - | chr6.1:11581752-11581771 | MS.gene87987:intron | 40.0% | |
| CAAGGAACATGCATGCTTTA+AGG | - | chr6.1:11580877-11580896 | MS.gene87987:CDS | 40.0% | |
| CCTTCACTTCTTCACACAAT+GGG | + | chr6.1:11583034-11583053 | None:intergenic | 40.0% | |
| CTCAGTGCTTGAAAAAGCTA+AGG | - | chr6.1:11582746-11582765 | MS.gene87987:intron | 40.0% | |
| GGAAATGGAAGTTCAGATTC+AGG | - | chr6.1:11580918-11580937 | MS.gene87987:CDS | 40.0% | |
| GGCAGCAGTAAAATTGGTAA+GGG | - | chr6.1:11581576-11581595 | MS.gene87987:CDS | 40.0% | |
| TCCTTCACTTCTTCACACAA+TGG | + | chr6.1:11583035-11583054 | None:intergenic | 40.0% | |
| TGCTTGACATTGACAACACA+TGG | - | chr6.1:11582193-11582212 | MS.gene87987:intron | 40.0% | |
| TGGCAGCAGTAAAATTGGTA+AGG | - | chr6.1:11581575-11581594 | MS.gene87987:CDS | 40.0% | |
| ! | AGGATCAGTAGAAGCATGAA+TGG | - | chr6.1:11581540-11581559 | MS.gene87987:CDS | 40.0% |
| ! | TCACCTTCTTGTGTTTGTTG+AGG | + | chr6.1:11582909-11582928 | None:intergenic | 40.0% |
| ! | TCTTTGAGAGTCCTCACTAT+TGG | + | chr6.1:11582964-11582983 | None:intergenic | 40.0% |
| ! | TTGACTTGAATGGTTTCAGC+TGG | - | chr6.1:11583467-11583486 | MS.gene87987:CDS | 40.0% |
| !! | AAGAAGCACCATTGTCATCA+TGG | + | chr6.1:11583432-11583451 | None:intergenic | 40.0% |
| !! | AGAAGCACCATTGTCATCAT+GGG | + | chr6.1:11583431-11583450 | None:intergenic | 40.0% |
| !! | CTTGTCACTACTTCTGAAGT+TGG | + | chr6.1:11581734-11581753 | None:intergenic | 40.0% |
| !! | TCTGGTGTCCATTTTAGTCT+TGG | + | chr6.1:11580969-11580988 | None:intergenic | 40.0% |
| !!! | CTTTTTCAAGCACTGAGTGA+AGG | + | chr6.1:11582743-11582762 | None:intergenic | 40.0% |
| AAGAGACTTGACGTCCTTTC+TGG | + | chr6.1:11583217-11583236 | None:intergenic | 45.0% | |
| AGCAACATCAGCAACAAGCA+AGG | - | chr6.1:11580859-11580878 | MS.gene87987:CDS | 45.0% | |
| ATCCTCAATTTGGCCCCTAT+AGG | - | chr6.1:11582067-11582086 | MS.gene87987:intron | 45.0% | |
| CAACTACGAATAGAGGCTCA+AGG | - | chr6.1:11582711-11582730 | MS.gene87987:intron | 45.0% | |
| CCCATTGTGTGAAGAAGTGA+AGG | - | chr6.1:11583031-11583050 | MS.gene87987:CDS | 45.0% | |
| GAAGCAGTCAATCAACTTGG+AGG | - | chr6.1:11581008-11581027 | MS.gene87987:CDS | 45.0% | |
| GACGGCGCCTCAATTATATT+AGG | + | chr6.1:11582618-11582637 | None:intergenic | 45.0% | |
| TATGGGACTTGATGCTGCAA+AGG | - | chr6.1:11582797-11582816 | MS.gene87987:intron | 45.0% | |
| TGAGCAGCTTGAGGTATAGA+AGG | - | chr6.1:11581978-11581997 | MS.gene87987:intron | 45.0% | |
| TGGCCTCAACAAACACAAGA+AGG | - | chr6.1:11582903-11582922 | MS.gene87987:intron | 45.0% | |
| TTAAGGATGCACATGCAAGG+AGG | - | chr6.1:11580894-11580913 | MS.gene87987:CDS | 45.0% | |
| ! | GCTGATGTTGCTGATGATGA+TGG | + | chr6.1:11580851-11580870 | None:intergenic | 45.0% |
| ! | GTCCTTTCTGGTACTTCATC+CGG | + | chr6.1:11583205-11583224 | None:intergenic | 45.0% |
| !! | GCTTTAAGGATGCACATGCA+AGG | - | chr6.1:11580891-11580910 | MS.gene87987:CDS | 45.0% |
| !! | AAAACTAAAAATTATTTATA+TGG | + | chr6.1:11581366-11581385 | None:intergenic | 5.0% |
| !!! | ATATAAATAATTTTTAGTTT+TGG | - | chr6.1:11581365-11581384 | MS.gene87987:CDS | 5.0% |
| CACATGCAAGGAGGAGGAAA+TGG | - | chr6.1:11580903-11580922 | MS.gene87987:CDS | 50.0% | |
| GTCCTATAGGGGCCAAATTG+AGG | + | chr6.1:11582072-11582091 | None:intergenic | 50.0% | |
| ! | GACCGGATGAAGTACCAGAA+AGG | - | chr6.1:11583200-11583219 | MS.gene87987:intron | 50.0% |
| AGGATGCACATGCAAGGAGG+AGG | - | chr6.1:11580897-11580916 | MS.gene87987:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 11580840 | 11583498 | 11580840 | ID=MS.gene87987 |
| chr6.1 | mRNA | 11580840 | 11583498 | 11580840 | ID=MS.gene87987.t1;Parent=MS.gene87987 |
| chr6.1 | exon | 11583300 | 11583498 | 11583300 | ID=MS.gene87987.t1.exon1;Parent=MS.gene87987.t1 |
| chr6.1 | CDS | 11583300 | 11583498 | 11583300 | ID=cds.MS.gene87987.t1;Parent=MS.gene87987.t1 |
| chr6.1 | exon | 11583020 | 11583096 | 11583020 | ID=MS.gene87987.t1.exon2;Parent=MS.gene87987.t1 |
| chr6.1 | CDS | 11583020 | 11583096 | 11583020 | ID=cds.MS.gene87987.t1;Parent=MS.gene87987.t1 |
| chr6.1 | exon | 11582747 | 11582804 | 11582747 | ID=MS.gene87987.t1.exon3;Parent=MS.gene87987.t1 |
| chr6.1 | CDS | 11582747 | 11582804 | 11582747 | ID=cds.MS.gene87987.t1;Parent=MS.gene87987.t1 |
| chr6.1 | exon | 11582522 | 11582597 | 11582522 | ID=MS.gene87987.t1.exon4;Parent=MS.gene87987.t1 |
| chr6.1 | CDS | 11582522 | 11582597 | 11582522 | ID=cds.MS.gene87987.t1;Parent=MS.gene87987.t1 |
| chr6.1 | exon | 11582348 | 11582417 | 11582348 | ID=MS.gene87987.t1.exon5;Parent=MS.gene87987.t1 |
| chr6.1 | CDS | 11582348 | 11582417 | 11582348 | ID=cds.MS.gene87987.t1;Parent=MS.gene87987.t1 |
| chr6.1 | exon | 11581240 | 11581642 | 11581240 | ID=MS.gene87987.t1.exon6;Parent=MS.gene87987.t1 |
| chr6.1 | CDS | 11581240 | 11581642 | 11581240 | ID=cds.MS.gene87987.t1;Parent=MS.gene87987.t1 |
| chr6.1 | exon | 11580840 | 11581138 | 11580840 | ID=MS.gene87987.t1.exon7;Parent=MS.gene87987.t1 |
| chr6.1 | CDS | 11580840 | 11581138 | 11580840 | ID=cds.MS.gene87987.t1;Parent=MS.gene87987.t1 |
| Gene Sequence |
| Protein sequence |
