Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88062.t1 | XP_003622139.1 | 93.2 | 222 | 11 | 2 | 1 | 221 | 66 | 284 | 5.80E-98 | 367.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88062.t1 | Q9LSD5 | 58.9 | 209 | 63 | 6 | 1 | 203 | 94 | 285 | 1.2e-38 | 161.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88062.t1 | G7L283 | 93.2 | 222 | 11 | 2 | 1 | 221 | 66 | 284 | 4.2e-98 | 367.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene88062.t1 | TF | TCP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene88062 | 0.80867 | 2.76E-50 | -1.69E-46 |
| MS.gene04918 | MS.gene88062 | 0.835647 | 1.49E-56 | -1.69E-46 |
| MS.gene04919 | MS.gene88062 | 0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene88062 | 0.832545 | 8.89E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene88062 | 0.827478 | 1.53E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene88062 | 0.812285 | 4.58E-51 | -1.69E-46 |
| MS.gene049499 | MS.gene88062 | 0.890613 | 8.41E-74 | -1.69E-46 |
| MS.gene049983 | MS.gene88062 | 0.817737 | 2.82E-52 | -1.69E-46 |
| MS.gene050238 | MS.gene88062 | 0.809992 | 1.44E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene88062 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene88062 | 0.815378 | 9.53E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene88062 | 0.805318 | 1.41E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene88062 | 0.826009 | 3.43E-54 | -1.69E-46 |
| MS.gene052534 | MS.gene88062 | 0.818913 | 1.53E-52 | -1.69E-46 |
| MS.gene053272 | MS.gene88062 | -0.811286 | 7.55E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene88062 | 0.801605 | 8.32E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene88062 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene88062 | 0.808341 | 3.25E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene88062 | 0.812058 | 5.13E-51 | -1.69E-46 |
| MS.gene055150 | MS.gene88062 | 0.81607 | 6.68E-52 | -1.69E-46 |
| MS.gene055386 | MS.gene88062 | 0.81935 | 1.22E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene88062 | 0.806436 | 8.23E-50 | -1.69E-46 |
| MS.gene055724 | MS.gene88062 | 0.800908 | 1.16E-48 | -1.69E-46 |
| MS.gene05624 | MS.gene88062 | 0.813225 | 2.85E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene88062 | 0.842189 | 3.01E-58 | -1.69E-46 |
| MS.gene05686 | MS.gene88062 | 0.837828 | 4.13E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene88062 | 0.839217 | 1.81E-57 | -1.69E-46 |
| MS.gene058159 | MS.gene88062 | 0.803588 | 3.25E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene88062 | 0.846357 | 2.29E-59 | -1.69E-46 |
| MS.gene058783 | MS.gene88062 | 0.829645 | 4.58E-55 | -1.69E-46 |
| MS.gene05952 | MS.gene88062 | 0.838582 | 2.64E-57 | -1.69E-46 |
| MS.gene05985 | MS.gene88062 | -0.838135 | 3.44E-57 | -1.69E-46 |
| MS.gene059901 | MS.gene88062 | -0.809519 | 1.82E-50 | -1.69E-46 |
| MS.gene060244 | MS.gene88062 | 0.808814 | 2.57E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene88062 | 0.819014 | 1.45E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene88062 | 0.82274 | 2.02E-53 | -1.69E-46 |
| MS.gene060935 | MS.gene88062 | 0.833361 | 5.57E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene88062 | 0.845024 | 5.25E-59 | -1.69E-46 |
| MS.gene061100 | MS.gene88062 | 0.817804 | 2.73E-52 | -1.69E-46 |
| MS.gene061188 | MS.gene88062 | 0.856847 | 2.44E-62 | -1.69E-46 |
| MS.gene061243 | MS.gene88062 | 0.804076 | 2.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88062.t1 | MTR_7g028160 | 95.946 | 222 | 5 | 2 | 1 | 221 | 66 | 284 | 5.05e-152 | 423 |
| MS.gene88062.t1 | MTR_5g039600 | 57.292 | 96 | 24 | 3 | 1 | 79 | 83 | 178 | 3.67e-25 | 102 |
| MS.gene88062.t1 | MTR_2g006150 | 75.000 | 64 | 10 | 1 | 1 | 58 | 146 | 209 | 1.69e-24 | 100 |
| MS.gene88062.t1 | MTR_2g006150 | 75.000 | 64 | 10 | 1 | 1 | 58 | 146 | 209 | 1.83e-24 | 100 |
| MS.gene88062.t1 | MTR_8g033070 | 70.968 | 62 | 18 | 0 | 1 | 62 | 96 | 157 | 2.37e-24 | 98.6 |
| MS.gene88062.t1 | MTR_4g108370 | 89.362 | 47 | 5 | 0 | 1 | 47 | 113 | 159 | 8.89e-24 | 98.6 |
| MS.gene88062.t1 | MTR_1g101810 | 70.968 | 62 | 18 | 0 | 1 | 62 | 80 | 141 | 1.11e-23 | 97.1 |
| MS.gene88062.t1 | MTR_1g063870 | 85.106 | 47 | 7 | 0 | 1 | 47 | 65 | 111 | 1.60e-23 | 94.0 |
| MS.gene88062.t1 | MTR_1g101810 | 70.968 | 62 | 18 | 0 | 1 | 62 | 110 | 171 | 1.71e-23 | 97.1 |
| MS.gene88062.t1 | MTR_1g038650 | 62.162 | 74 | 28 | 0 | 1 | 74 | 48 | 121 | 4.25e-23 | 93.6 |
| MS.gene88062.t1 | MTR_1g114380 | 83.333 | 48 | 8 | 0 | 1 | 48 | 49 | 96 | 2.59e-22 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88062.t1 | AT3G27010 | 56.061 | 198 | 64 | 7 | 1 | 192 | 94 | 274 | 2.95e-49 | 163 |
| MS.gene88062.t1 | AT3G27010 | 56.061 | 198 | 64 | 7 | 1 | 192 | 94 | 274 | 2.95e-49 | 163 |
| MS.gene88062.t1 | AT1G58100 | 75.000 | 64 | 10 | 1 | 1 | 58 | 76 | 139 | 2.56e-25 | 102 |
| MS.gene88062.t1 | AT5G41030 | 35.437 | 206 | 69 | 11 | 1 | 204 | 84 | 227 | 9.82e-25 | 98.2 |
| MS.gene88062.t1 | AT2G45680 | 64.706 | 68 | 24 | 0 | 1 | 68 | 91 | 158 | 4.58e-24 | 98.2 |
| MS.gene88062.t1 | AT1G69690 | 85.417 | 48 | 7 | 0 | 1 | 48 | 68 | 115 | 6.06e-24 | 97.4 |
| MS.gene88062.t1 | AT3G47620 | 91.489 | 47 | 4 | 0 | 1 | 47 | 133 | 179 | 6.42e-24 | 99.4 |
| MS.gene88062.t1 | AT1G35560 | 73.438 | 64 | 11 | 1 | 1 | 58 | 71 | 134 | 7.68e-24 | 97.4 |
| MS.gene88062.t1 | AT1G72010 | 87.234 | 47 | 6 | 0 | 1 | 47 | 79 | 125 | 1.96e-23 | 97.1 |
| MS.gene88062.t1 | AT5G51910 | 65.625 | 64 | 22 | 0 | 1 | 64 | 73 | 136 | 2.55e-23 | 95.5 |
| MS.gene88062.t1 | AT5G51910 | 65.625 | 64 | 22 | 0 | 1 | 64 | 73 | 136 | 2.55e-23 | 95.5 |
| MS.gene88062.t1 | AT5G08330 | 72.881 | 59 | 16 | 0 | 1 | 59 | 47 | 105 | 2.89e-23 | 94.0 |
| MS.gene88062.t1 | AT5G23280 | 83.333 | 48 | 8 | 0 | 1 | 48 | 55 | 102 | 1.40e-22 | 92.4 |
| MS.gene88062.t1 | AT2G37000 | 84.091 | 44 | 7 | 0 | 1 | 44 | 59 | 102 | 4.53e-19 | 81.6 |
| MS.gene88062.t1 | AT3G45150 | 58.140 | 43 | 18 | 0 | 1 | 43 | 33 | 75 | 1.10e-11 | 61.6 |
Find 55 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATGCCTGGTTTGGAATT+AGG | 0.117190 | 7.1:+69470722 | MS.gene88062:CDS |
| ATGTTAGTTCTACAAGTTTA+TGG | 0.160920 | 7.1:+69470504 | MS.gene88062:CDS |
| CAAGGTTCATCTTTGTCTTC+TGG | 0.222188 | 7.1:+69470404 | MS.gene88062:CDS |
| AGTTGAATGATAGGAATAAT+TGG | 0.236296 | 7.1:+69470432 | MS.gene88062:CDS |
| CATCATCAAGTTGGTGGATA+TGG | 0.242402 | 7.1:+69470530 | MS.gene88062:CDS |
| TATGCCAACAGGAACAAATT+TGG | 0.247795 | 7.1:+69470652 | MS.gene88062:CDS |
| GAGTATTATTCTGCTGATTC+TGG | 0.260804 | 7.1:-69470838 | None:intergenic |
| AGATGCCTGGTTTGGAATTA+GGG | 0.264298 | 7.1:+69470723 | MS.gene88062:CDS |
| GATGGGCCTGATGGGCTTGA+TGG | 0.267687 | 7.1:-69470463 | None:intergenic |
| GCTTCAGCTTTAGCTTCTTC+TGG | 0.304919 | 7.1:+69470365 | MS.gene88062:CDS |
| CCTGTTGCAGCTATGATTGA+TGG | 0.306906 | 7.1:-69470326 | None:intergenic |
| GAACTGTGAGAATCATCTTT+AGG | 0.314551 | 7.1:-69470860 | None:intergenic |
| TTTCATCAATCATCATCTTC+TGG | 0.335762 | 7.1:+69470554 | MS.gene88062:CDS |
| TTTCAACTAACAAGAGAGTT+AGG | 0.353942 | 7.1:+69470254 | MS.gene88062:CDS |
| CTGGTTTACAGTTGAATGAT+AGG | 0.368100 | 7.1:+69470423 | MS.gene88062:CDS |
| ATGGGCCTGATGGGCCTGAT+GGG | 0.381397 | 7.1:-69470471 | None:intergenic |
| GATGGGCCTGATGGGCCTGA+TGG | 0.383776 | 7.1:-69470472 | None:intergenic |
| ATGGGCCTGATGGGCTTGAT+GGG | 0.393154 | 7.1:-69470462 | None:intergenic |
| ATGCCAACAGGAACAAATTT+GGG | 0.405289 | 7.1:+69470653 | MS.gene88062:CDS |
| TCAAGCCCATCAGGCCCATC+AGG | 0.407369 | 7.1:+69470466 | MS.gene88062:CDS |
| TCAAACCCATCAAGCCCATC+AGG | 0.425492 | 7.1:+69470457 | MS.gene88062:CDS |
| ACTATTGGTGAAAATAATAG+TGG | 0.437127 | 7.1:+69470593 | MS.gene88062:CDS |
| ATCATAGCTGCAACAGGAAC+AGG | 0.443120 | 7.1:+69470332 | MS.gene88062:CDS |
| GGTTTAGTAGCTACTACTAT+TGG | 0.444798 | 7.1:+69470578 | MS.gene88062:CDS |
| ACTCAGATTTATCAGCAGAT+TGG | 0.447988 | 7.1:+69470791 | MS.gene88062:CDS |
| TCTGGATTTGATATGCCAAC+AGG | 0.449552 | 7.1:+69470641 | MS.gene88062:CDS |
| ACTCCCAAATTTGTTCCTGT+TGG | 0.452759 | 7.1:-69470656 | None:intergenic |
| GTTGAATGATAGGAATAATT+GGG | 0.466051 | 7.1:+69470433 | MS.gene88062:CDS |
| AAATCAGCAGATGCCTGGTT+TGG | 0.470684 | 7.1:+69470715 | MS.gene88062:CDS |
| AACTAACATGATGACCTTGA+TGG | 0.471715 | 7.1:-69470490 | None:intergenic |
| ATGACCTTGATGGGCCTGAT+GGG | 0.473600 | 7.1:-69470480 | None:intergenic |
| CCATCAATCATAGCTGCAAC+AGG | 0.479395 | 7.1:+69470326 | MS.gene88062:CDS |
| TTGTCACAAGATGGACATAT+TGG | 0.480930 | 7.1:+69470746 | MS.gene88062:CDS |
| GAATTAGGGTTGTCACAAGA+TGG | 0.488895 | 7.1:+69470737 | MS.gene88062:CDS |
| TGGCCTCATCATCAAGTTGG+TGG | 0.511204 | 7.1:+69470524 | MS.gene88062:CDS |
| GGTGCAAATCAGCAGATGCC+TGG | 0.519917 | 7.1:+69470710 | MS.gene88062:CDS |
| CAGATGGTGAAACAATTCAA+TGG | 0.529264 | 7.1:+69470285 | MS.gene88062:CDS |
| AGATTGGTCAAAATCAAACT+AGG | 0.530078 | 7.1:+69470807 | MS.gene88062:CDS |
| ATTCTTGCTGCACATAAAGC+TGG | 0.536084 | 7.1:-69470230 | None:intergenic |
| AACAGGAACAAATTTGGGAG+TGG | 0.545963 | 7.1:+69470658 | MS.gene88062:CDS |
| CAGGCCCATCAGGCCCATCA+AGG | 0.557193 | 7.1:+69470476 | MS.gene88062:CDS |
| GATGACCTTGATGGGCCTGA+TGG | 0.557322 | 7.1:-69470481 | None:intergenic |
| ACTAACATGATGACCTTGAT+GGG | 0.557914 | 7.1:-69470489 | None:intergenic |
| CATCAATCATCATCTTCTGG+TGG | 0.564429 | 7.1:+69470557 | MS.gene88062:CDS |
| GGAACAAATTTGGGAGTGGG+AGG | 0.568972 | 7.1:+69470662 | MS.gene88062:CDS |
| GAAGAAGCTAAAGCTGAAGC+TGG | 0.576280 | 7.1:-69470362 | None:intergenic |
| GGTAATACTTTGACACCACA+AGG | 0.588387 | 7.1:+69470386 | MS.gene88062:CDS |
| ACAGGAACAAATTTGGGAGT+GGG | 0.594534 | 7.1:+69470659 | MS.gene88062:CDS |
| GATTGGTCAAAATCAAACTA+GGG | 0.595101 | 7.1:+69470808 | MS.gene88062:CDS |
| GAACAAATTTGGGAGTGGGA+GGG | 0.598189 | 7.1:+69470663 | MS.gene88062:CDS |
| TTATGGCCTCATCATCAAGT+TGG | 0.605767 | 7.1:+69470521 | MS.gene88062:CDS |
| GAGTTAGGTCATAAATCAGA+TGG | 0.610512 | 7.1:+69470269 | MS.gene88062:CDS |
| TATCCACCAACTTGATGATG+AGG | 0.610804 | 7.1:-69470527 | None:intergenic |
| GACAACCCTAATTCCAAACC+AGG | 0.628289 | 7.1:-69470728 | None:intergenic |
| GAAGACAAAGATGAACCTTG+TGG | 0.735014 | 7.1:-69470401 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATTATTTTCAGAAAATT+GGG | + | chr7.1:69470615-69470634 | MS.gene88062:CDS | 15.0% |
| !!! | ATGAGTTTTACATCAATTTT+GGG | + | chr7.1:69470686-69470705 | MS.gene88062:CDS | 20.0% |
| !!! | GGAAATTATTTTCAGAAAAT+TGG | + | chr7.1:69470614-69470633 | MS.gene88062:CDS | 20.0% |
| ! | ACTATTGGTGAAAATAATAG+TGG | + | chr7.1:69470593-69470612 | MS.gene88062:CDS | 25.0% |
| ! | AGTTGAATGATAGGAATAAT+TGG | + | chr7.1:69470432-69470451 | MS.gene88062:CDS | 25.0% |
| ! | GTTGAATGATAGGAATAATT+GGG | + | chr7.1:69470433-69470452 | MS.gene88062:CDS | 25.0% |
| !! | GATGAGTTTTACATCAATTT+TGG | + | chr7.1:69470685-69470704 | MS.gene88062:CDS | 25.0% |
| !! | TGAGTTTTACATCAATTTTG+GGG | + | chr7.1:69470687-69470706 | MS.gene88062:CDS | 25.0% |
| !!! | ATGTTAGTTCTACAAGTTTA+TGG | + | chr7.1:69470504-69470523 | MS.gene88062:CDS | 25.0% |
| TTTCAACTAACAAGAGAGTT+AGG | + | chr7.1:69470254-69470273 | MS.gene88062:CDS | 30.0% | |
| TTTCATCAATCATCATCTTC+TGG | + | chr7.1:69470554-69470573 | MS.gene88062:CDS | 30.0% | |
| ! | AGATTGGTCAAAATCAAACT+AGG | + | chr7.1:69470807-69470826 | MS.gene88062:CDS | 30.0% |
| ! | AGTTTTACATCAATTTTGGG+GGG | + | chr7.1:69470689-69470708 | MS.gene88062:CDS | 30.0% |
| ! | GAGTTTTACATCAATTTTGG+GGG | + | chr7.1:69470688-69470707 | MS.gene88062:CDS | 30.0% |
| ! | GATTGGTCAAAATCAAACTA+GGG | + | chr7.1:69470808-69470827 | MS.gene88062:CDS | 30.0% |
| ! | TTTCAGAAAATTGGGTTTTC+TGG | + | chr7.1:69470623-69470642 | MS.gene88062:CDS | 30.0% |
| AACTAACATGATGACCTTGA+TGG | - | chr7.1:69470493-69470512 | None:intergenic | 35.0% | |
| ACTAACATGATGACCTTGAT+GGG | - | chr7.1:69470492-69470511 | None:intergenic | 35.0% | |
| ACTCAGATTTATCAGCAGAT+TGG | + | chr7.1:69470791-69470810 | MS.gene88062:CDS | 35.0% | |
| ATGCCAACAGGAACAAATTT+GGG | + | chr7.1:69470653-69470672 | MS.gene88062:CDS | 35.0% | |
| CAGATGGTGAAACAATTCAA+TGG | + | chr7.1:69470285-69470304 | MS.gene88062:CDS | 35.0% | |
| CTGGTTTACAGTTGAATGAT+AGG | + | chr7.1:69470423-69470442 | MS.gene88062:CDS | 35.0% | |
| GAACTGTGAGAATCATCTTT+AGG | - | chr7.1:69470863-69470882 | None:intergenic | 35.0% | |
| GAGTTAGGTCATAAATCAGA+TGG | + | chr7.1:69470269-69470288 | MS.gene88062:CDS | 35.0% | |
| GGTTTAGTAGCTACTACTAT+TGG | + | chr7.1:69470578-69470597 | MS.gene88062:CDS | 35.0% | |
| TATGCCAACAGGAACAAATT+TGG | + | chr7.1:69470652-69470671 | MS.gene88062:CDS | 35.0% | |
| TTGTCACAAGATGGACATAT+TGG | + | chr7.1:69470746-69470765 | MS.gene88062:CDS | 35.0% | |
| !! | GAGTATTATTCTGCTGATTC+TGG | - | chr7.1:69470841-69470860 | None:intergenic | 35.0% |
| AACAGGAACAAATTTGGGAG+TGG | + | chr7.1:69470658-69470677 | MS.gene88062:CDS | 40.0% | |
| ACAGGAACAAATTTGGGAGT+GGG | + | chr7.1:69470659-69470678 | MS.gene88062:CDS | 40.0% | |
| ATTCTTGCTGCACATAAAGC+TGG | - | chr7.1:69470233-69470252 | None:intergenic | 40.0% | |
| CAAGGTTCATCTTTGTCTTC+TGG | + | chr7.1:69470404-69470423 | MS.gene88062:CDS | 40.0% | |
| CATCAATCATCATCTTCTGG+TGG | + | chr7.1:69470557-69470576 | MS.gene88062:CDS | 40.0% | |
| GAAGACAAAGATGAACCTTG+TGG | - | chr7.1:69470404-69470423 | None:intergenic | 40.0% | |
| GAATTAGGGTTGTCACAAGA+TGG | + | chr7.1:69470737-69470756 | MS.gene88062:CDS | 40.0% | |
| GGTAATACTTTGACACCACA+AGG | + | chr7.1:69470386-69470405 | MS.gene88062:CDS | 40.0% | |
| TCTGGATTTGATATGCCAAC+AGG | + | chr7.1:69470641-69470660 | MS.gene88062:CDS | 40.0% | |
| TTATGGCCTCATCATCAAGT+TGG | + | chr7.1:69470521-69470540 | MS.gene88062:CDS | 40.0% | |
| ! | ACTCCCAAATTTGTTCCTGT+TGG | - | chr7.1:69470659-69470678 | None:intergenic | 40.0% |
| !! | AGATGCCTGGTTTGGAATTA+GGG | + | chr7.1:69470723-69470742 | MS.gene88062:CDS | 40.0% |
| !! | CATCATCAAGTTGGTGGATA+TGG | + | chr7.1:69470530-69470549 | MS.gene88062:CDS | 40.0% |
| !! | TATCCACCAACTTGATGATG+AGG | - | chr7.1:69470530-69470549 | None:intergenic | 40.0% |
| AAATCAGCAGATGCCTGGTT+TGG | + | chr7.1:69470715-69470734 | MS.gene88062:CDS | 45.0% | |
| ATCATAGCTGCAACAGGAAC+AGG | + | chr7.1:69470332-69470351 | MS.gene88062:CDS | 45.0% | |
| CCATCAATCATAGCTGCAAC+AGG | + | chr7.1:69470326-69470345 | MS.gene88062:CDS | 45.0% | |
| CCTGTTGCAGCTATGATTGA+TGG | - | chr7.1:69470329-69470348 | None:intergenic | 45.0% | |
| GAACAAATTTGGGAGTGGGA+GGG | + | chr7.1:69470663-69470682 | MS.gene88062:CDS | 45.0% | |
| GAAGAAGCTAAAGCTGAAGC+TGG | - | chr7.1:69470365-69470384 | None:intergenic | 45.0% | |
| GACAACCCTAATTCCAAACC+AGG | - | chr7.1:69470731-69470750 | None:intergenic | 45.0% | |
| ! | GCTTCAGCTTTAGCTTCTTC+TGG | + | chr7.1:69470365-69470384 | MS.gene88062:CDS | 45.0% |
| !! | CAGATGCCTGGTTTGGAATT+AGG | + | chr7.1:69470722-69470741 | MS.gene88062:CDS | 45.0% |
| GGAACAAATTTGGGAGTGGG+AGG | + | chr7.1:69470662-69470681 | MS.gene88062:CDS | 50.0% | |
| TCAAACCCATCAAGCCCATC+AGG | + | chr7.1:69470457-69470476 | MS.gene88062:CDS | 50.0% | |
| ! | ATGACCTTGATGGGCCTGAT+GGG | - | chr7.1:69470483-69470502 | None:intergenic | 50.0% |
| !! | TGGCCTCATCATCAAGTTGG+TGG | + | chr7.1:69470524-69470543 | MS.gene88062:CDS | 50.0% |
| GGTGCAAATCAGCAGATGCC+TGG | + | chr7.1:69470710-69470729 | MS.gene88062:CDS | 55.0% | |
| ! | GATGACCTTGATGGGCCTGA+TGG | - | chr7.1:69470484-69470503 | None:intergenic | 55.0% |
| !! | ATGGGCCTGATGGGCTTGAT+GGG | - | chr7.1:69470465-69470484 | None:intergenic | 55.0% |
| TCAAGCCCATCAGGCCCATC+AGG | + | chr7.1:69470466-69470485 | MS.gene88062:CDS | 60.0% | |
| ! | ATGGGCCTGATGGGCCTGAT+GGG | - | chr7.1:69470474-69470493 | None:intergenic | 60.0% |
| !! | GATGGGCCTGATGGGCTTGA+TGG | - | chr7.1:69470466-69470485 | None:intergenic | 60.0% |
| CAGGCCCATCAGGCCCATCA+AGG | + | chr7.1:69470476-69470495 | MS.gene88062:CDS | 65.0% | |
| ! | GATGGGCCTGATGGGCCTGA+TGG | - | chr7.1:69470475-69470494 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 69470227 | 69470892 | 69470227 | ID=MS.gene88062 |
| chr7.1 | mRNA | 69470227 | 69470892 | 69470227 | ID=MS.gene88062.t1;Parent=MS.gene88062 |
| chr7.1 | exon | 69470227 | 69470892 | 69470227 | ID=MS.gene88062.t1.exon1;Parent=MS.gene88062.t1 |
| chr7.1 | CDS | 69470227 | 69470892 | 69470227 | ID=cds.MS.gene88062.t1;Parent=MS.gene88062.t1 |
| Gene Sequence |
| Protein sequence |
