Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90984.t1 | XP_013456479.1 | 88.2 | 348 | 6 | 2 | 1 | 317 | 1 | 344 | 1.20E-165 | 592.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90984.t1 | A0A1P8B554 | 68.7 | 249 | 67 | 4 | 6 | 243 | 11 | 259 | 4.1e-93 | 342.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90984.t1 | A0A072UXB7 | 88.2 | 348 | 6 | 2 | 1 | 317 | 1 | 344 | 8.8e-166 | 592.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene90984 | 0.848347 | 6.49E-60 | -1.69E-46 |
| MS.gene049622 | MS.gene90984 | 0.811325 | 7.41E-51 | -1.69E-46 |
| MS.gene049697 | MS.gene90984 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene049989 | MS.gene90984 | 0.833932 | 4.01E-56 | -1.69E-46 |
| MS.gene050297 | MS.gene90984 | 0.819743 | 9.90E-53 | -1.69E-46 |
| MS.gene05054 | MS.gene90984 | 0.801839 | 7.45E-49 | -1.69E-46 |
| MS.gene050707 | MS.gene90984 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene051067 | MS.gene90984 | 0.800537 | 1.38E-48 | -1.69E-46 |
| MS.gene051263 | MS.gene90984 | 0.832424 | 9.53E-56 | -1.69E-46 |
| MS.gene051423 | MS.gene90984 | 0.804458 | 2.14E-49 | -1.69E-46 |
| MS.gene051478 | MS.gene90984 | 0.811827 | 5.76E-51 | -1.69E-46 |
| MS.gene051742 | MS.gene90984 | 0.815703 | 8.07E-52 | -1.69E-46 |
| MS.gene052143 | MS.gene90984 | 0.843141 | 1.68E-58 | -1.69E-46 |
| MS.gene052308 | MS.gene90984 | 0.840219 | 9.92E-58 | -1.69E-46 |
| MS.gene052367 | MS.gene90984 | 0.856721 | 2.66E-62 | -1.69E-46 |
| MS.gene052383 | MS.gene90984 | 0.805295 | 1.43E-49 | -1.69E-46 |
| MS.gene053173 | MS.gene90984 | 0.822557 | 2.22E-53 | -1.69E-46 |
| MS.gene053348 | MS.gene90984 | 0.8401 | 1.07E-57 | -1.69E-46 |
| MS.gene053416 | MS.gene90984 | 0.810186 | 1.31E-50 | -1.69E-46 |
| MS.gene053417 | MS.gene90984 | 0.810048 | 1.40E-50 | -1.69E-46 |
| MS.gene053500 | MS.gene90984 | 0.805304 | 1.42E-49 | -1.69E-46 |
| MS.gene054551 | MS.gene90984 | 0.846873 | 1.65E-59 | -1.69E-46 |
| MS.gene054593 | MS.gene90984 | 0.830627 | 2.64E-55 | -1.69E-46 |
| MS.gene054614 | MS.gene90984 | 0.850851 | 1.30E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene90984 | 0.807251 | 5.54E-50 | -1.69E-46 |
| MS.gene054999 | MS.gene90984 | 0.81054 | 1.10E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene90984 | 0.84239 | 2.66E-58 | -1.69E-46 |
| MS.gene055578 | MS.gene90984 | 0.82961 | 4.68E-55 | -1.69E-46 |
| MS.gene055579 | MS.gene90984 | 0.823405 | 1.41E-53 | -1.69E-46 |
| MS.gene05583 | MS.gene90984 | 0.809253 | 2.07E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene90984 | 0.855817 | 4.89E-62 | -1.69E-46 |
| MS.gene056041 | MS.gene90984 | 0.878325 | 3.08E-69 | -1.69E-46 |
| MS.gene056042 | MS.gene90984 | 0.845543 | 3.80E-59 | -1.69E-46 |
| MS.gene056228 | MS.gene90984 | 0.813627 | 2.33E-51 | -1.69E-46 |
| MS.gene05640 | MS.gene90984 | 0.814973 | 1.17E-51 | -1.69E-46 |
| MS.gene056526 | MS.gene90984 | 0.825109 | 5.61E-54 | -1.69E-46 |
| MS.gene056528 | MS.gene90984 | 0.803483 | 3.41E-49 | -1.69E-46 |
| MS.gene05652 | MS.gene90984 | 0.807024 | 6.19E-50 | -1.69E-46 |
| MS.gene05709 | MS.gene90984 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene057458 | MS.gene90984 | 0.82834 | 9.49E-55 | -1.69E-46 |
| MS.gene058128 | MS.gene90984 | 0.801677 | 8.04E-49 | -1.69E-46 |
| MS.gene058196 | MS.gene90984 | 0.801493 | 8.77E-49 | -1.69E-46 |
| MS.gene058197 | MS.gene90984 | 0.802779 | 4.77E-49 | -1.69E-46 |
| MS.gene058198 | MS.gene90984 | 0.802112 | 6.55E-49 | -1.69E-46 |
| MS.gene058849 | MS.gene90984 | 0.808137 | 3.59E-50 | -1.69E-46 |
| MS.gene058853 | MS.gene90984 | 0.835271 | 1.85E-56 | -1.69E-46 |
| MS.gene059300 | MS.gene90984 | 0.817288 | 3.56E-52 | -1.69E-46 |
| MS.gene059553 | MS.gene90984 | 0.825953 | 3.54E-54 | -1.69E-46 |
| MS.gene060473 | MS.gene90984 | 0.872304 | 3.53E-67 | -1.69E-46 |
| MS.gene060565 | MS.gene90984 | 0.865764 | 4.66E-65 | -1.69E-46 |
| MS.gene06057 | MS.gene90984 | 0.814396 | 1.57E-51 | -1.69E-46 |
| MS.gene060825 | MS.gene90984 | 0.825986 | 3.48E-54 | -1.69E-46 |
| MS.gene06093 | MS.gene90984 | 0.828684 | 7.84E-55 | -1.69E-46 |
| MS.gene061099 | MS.gene90984 | 0.822188 | 2.71E-53 | -1.69E-46 |
| MS.gene061260 | MS.gene90984 | 0.853333 | 2.56E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90984.t1 | MTR_4g073720 | 88.218 | 348 | 6 | 2 | 1 | 317 | 1 | 344 | 0.0 | 593 |
| MS.gene90984.t1 | MTR_5g022350 | 57.419 | 310 | 116 | 5 | 11 | 317 | 15 | 311 | 1.79e-119 | 346 |
| MS.gene90984.t1 | MTR_8g075510 | 69.787 | 235 | 65 | 3 | 14 | 245 | 18 | 249 | 1.47e-115 | 334 |
| MS.gene90984.t1 | MTR_8g075510 | 62.963 | 270 | 94 | 3 | 14 | 280 | 18 | 284 | 1.56e-114 | 333 |
| MS.gene90984.t1 | MTR_1g025420 | 61.977 | 263 | 88 | 6 | 8 | 258 | 3 | 265 | 1.09e-104 | 309 |
| MS.gene90984.t1 | MTR_1g025420 | 63.600 | 250 | 79 | 6 | 8 | 246 | 3 | 251 | 2.00e-103 | 304 |
| MS.gene90984.t1 | MTR_8g037890 | 57.588 | 257 | 101 | 5 | 9 | 257 | 9 | 265 | 4.45e-97 | 289 |
| MS.gene90984.t1 | MTR_8g075550 | 61.506 | 239 | 80 | 4 | 20 | 247 | 23 | 260 | 2.27e-95 | 285 |
| MS.gene90984.t1 | MTR_3g114030 | 63.478 | 230 | 76 | 5 | 21 | 242 | 3 | 232 | 1.09e-94 | 280 |
| MS.gene90984.t1 | MTR_5g022310 | 54.815 | 270 | 110 | 5 | 9 | 266 | 9 | 278 | 1.66e-92 | 277 |
| MS.gene90984.t1 | MTR_5g022310 | 57.430 | 249 | 94 | 5 | 9 | 246 | 9 | 256 | 5.89e-92 | 274 |
| MS.gene90984.t1 | MTR_4g073730 | 55.285 | 246 | 100 | 4 | 3 | 240 | 5 | 248 | 4.82e-90 | 270 |
| MS.gene90984.t1 | MTR_4g073730 | 55.285 | 246 | 100 | 4 | 3 | 240 | 5 | 248 | 1.04e-89 | 271 |
| MS.gene90984.t1 | MTR_8g056820 | 55.777 | 251 | 101 | 6 | 4 | 246 | 7 | 255 | 3.45e-89 | 267 |
| MS.gene90984.t1 | MTR_6g079580 | 53.586 | 237 | 103 | 4 | 9 | 240 | 6 | 240 | 6.91e-88 | 263 |
| MS.gene90984.t1 | MTR_3g111620 | 55.263 | 228 | 94 | 5 | 23 | 244 | 25 | 250 | 2.12e-84 | 254 |
| MS.gene90984.t1 | MTR_8g036215 | 53.333 | 240 | 105 | 4 | 4 | 239 | 1 | 237 | 2.71e-84 | 254 |
| MS.gene90984.t1 | MTR_1g021945 | 56.637 | 226 | 90 | 4 | 25 | 244 | 26 | 249 | 3.39e-83 | 251 |
| MS.gene90984.t1 | MTR_8g107140 | 50.612 | 245 | 114 | 4 | 3 | 242 | 5 | 247 | 1.40e-82 | 250 |
| MS.gene90984.t1 | MTR_1g062590 | 53.252 | 246 | 102 | 7 | 4 | 240 | 1 | 242 | 8.54e-80 | 243 |
| MS.gene90984.t1 | MTR_7g102380 | 50.206 | 243 | 114 | 5 | 6 | 242 | 2 | 243 | 1.29e-79 | 242 |
| MS.gene90984.t1 | MTR_1g062630 | 52.419 | 248 | 105 | 7 | 4 | 242 | 1 | 244 | 2.00e-79 | 243 |
| MS.gene90984.t1 | MTR_1g062660 | 52.846 | 246 | 107 | 7 | 4 | 242 | 1 | 244 | 8.76e-77 | 235 |
| MS.gene90984.t1 | MTR_1g062370 | 52.016 | 248 | 106 | 7 | 4 | 242 | 1 | 244 | 2.41e-76 | 234 |
| MS.gene90984.t1 | MTR_1g062350 | 52.016 | 248 | 106 | 7 | 4 | 242 | 1 | 244 | 2.51e-76 | 234 |
| MS.gene90984.t1 | MTR_2g069660 | 50.833 | 240 | 108 | 5 | 8 | 240 | 7 | 243 | 4.06e-76 | 233 |
| MS.gene90984.t1 | MTR_1g062340 | 53.165 | 237 | 101 | 6 | 12 | 242 | 12 | 244 | 2.36e-75 | 231 |
| MS.gene90984.t1 | MTR_5g059200 | 48.000 | 250 | 119 | 7 | 23 | 269 | 27 | 268 | 2.35e-72 | 225 |
| MS.gene90984.t1 | MTR_2g068655 | 49.351 | 231 | 111 | 4 | 21 | 245 | 27 | 257 | 1.58e-70 | 221 |
| MS.gene90984.t1 | MTR_2g068030 | 49.772 | 219 | 104 | 4 | 27 | 239 | 25 | 243 | 4.78e-70 | 218 |
| MS.gene90984.t1 | MTR_2g067980 | 50.218 | 229 | 106 | 4 | 22 | 242 | 21 | 249 | 1.74e-68 | 231 |
| MS.gene90984.t1 | MTR_3g068015 | 45.982 | 224 | 114 | 4 | 23 | 240 | 26 | 248 | 3.05e-68 | 213 |
| MS.gene90984.t1 | MTR_7g062610 | 45.378 | 238 | 120 | 4 | 8 | 240 | 10 | 242 | 2.00e-66 | 209 |
| MS.gene90984.t1 | MTR_6g009480 | 43.701 | 254 | 129 | 8 | 1 | 241 | 1 | 253 | 2.11e-64 | 204 |
| MS.gene90984.t1 | MTR_4g063630 | 45.798 | 238 | 116 | 8 | 13 | 239 | 16 | 251 | 8.50e-63 | 199 |
| MS.gene90984.t1 | MTR_5g022350 | 67.808 | 146 | 42 | 2 | 11 | 154 | 80 | 222 | 5.24e-62 | 196 |
| MS.gene90984.t1 | MTR_1g062690 | 45.344 | 247 | 100 | 7 | 4 | 242 | 1 | 220 | 3.10e-60 | 192 |
| MS.gene90984.t1 | MTR_5g010635 | 46.575 | 219 | 97 | 10 | 25 | 240 | 24 | 225 | 7.44e-50 | 166 |
| MS.gene90984.t1 | MTR_5g023850 | 40.711 | 253 | 103 | 9 | 4 | 246 | 7 | 222 | 3.64e-49 | 164 |
| MS.gene90984.t1 | MTR_8g096900 | 41.453 | 234 | 114 | 10 | 11 | 240 | 34 | 248 | 7.29e-47 | 158 |
| MS.gene90984.t1 | MTR_5g010640 | 38.800 | 250 | 129 | 10 | 1 | 240 | 1 | 236 | 3.68e-45 | 154 |
| MS.gene90984.t1 | MTR_2g067990 | 42.291 | 227 | 101 | 8 | 21 | 242 | 23 | 224 | 1.61e-44 | 162 |
| MS.gene90984.t1 | MTR_8g089020 | 47.134 | 157 | 59 | 3 | 79 | 232 | 21 | 156 | 1.39e-41 | 142 |
| MS.gene90984.t1 | MTR_2g067970 | 41.270 | 189 | 102 | 5 | 67 | 247 | 2 | 189 | 1.01e-39 | 149 |
| MS.gene90984.t1 | MTR_7g076360 | 36.893 | 206 | 72 | 3 | 25 | 230 | 8 | 155 | 9.93e-38 | 132 |
| MS.gene90984.t1 | MTR_2g063150 | 30.738 | 244 | 150 | 7 | 3 | 232 | 4 | 242 | 2.10e-34 | 126 |
| MS.gene90984.t1 | MTR_1g062390 | 30.769 | 247 | 149 | 7 | 6 | 241 | 4 | 239 | 6.42e-31 | 117 |
| MS.gene90984.t1 | MTR_8g096910 | 44.304 | 158 | 73 | 8 | 9 | 164 | 6 | 150 | 1.03e-26 | 103 |
| MS.gene90984.t1 | MTR_8g096920 | 44.928 | 138 | 62 | 7 | 4 | 139 | 1 | 126 | 3.99e-26 | 102 |
| MS.gene90984.t1 | MTR_1g062640 | 39.130 | 115 | 68 | 2 | 51 | 164 | 33 | 146 | 7.67e-18 | 79.3 |
| MS.gene90984.t1 | MTR_3g081550 | 50.526 | 95 | 40 | 4 | 109 | 196 | 15 | 109 | 1.98e-16 | 74.3 |
| MS.gene90984.t1 | MTR_5g068670 | 48.864 | 88 | 34 | 4 | 62 | 141 | 5 | 89 | 1.34e-14 | 70.1 |
| MS.gene90984.t1 | MTR_8g088960 | 45.946 | 74 | 36 | 3 | 125 | 196 | 14 | 85 | 4.09e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90984.t1 | AT4G38660 | 65.089 | 338 | 88 | 7 | 5 | 314 | 9 | 344 | 1.57e-142 | 406 |
| MS.gene90984.t1 | AT4G38660 | 66.149 | 322 | 80 | 6 | 20 | 314 | 3 | 322 | 3.16e-139 | 397 |
| MS.gene90984.t1 | AT4G24180 | 68.651 | 252 | 69 | 4 | 5 | 248 | 10 | 259 | 5.58e-121 | 350 |
| MS.gene90984.t1 | AT4G24180 | 68.235 | 255 | 70 | 4 | 5 | 248 | 10 | 264 | 9.91e-121 | 349 |
| MS.gene90984.t1 | AT4G24180 | 68.826 | 247 | 67 | 4 | 5 | 243 | 10 | 254 | 4.11e-119 | 343 |
| MS.gene90984.t1 | AT4G24180 | 68.400 | 250 | 68 | 4 | 5 | 243 | 10 | 259 | 6.36e-119 | 343 |
| MS.gene90984.t1 | AT4G24180 | 67.249 | 229 | 65 | 4 | 5 | 225 | 10 | 236 | 1.15e-106 | 314 |
| MS.gene90984.t1 | AT4G24180 | 66.379 | 232 | 67 | 4 | 5 | 225 | 10 | 241 | 1.48e-106 | 314 |
| MS.gene90984.t1 | AT1G75800 | 58.462 | 260 | 95 | 6 | 1 | 249 | 1 | 258 | 4.40e-97 | 290 |
| MS.gene90984.t1 | AT1G20030 | 64.502 | 231 | 72 | 5 | 21 | 241 | 16 | 246 | 4.44e-96 | 287 |
| MS.gene90984.t1 | AT1G20030 | 65.487 | 226 | 68 | 5 | 26 | 241 | 4 | 229 | 3.48e-95 | 284 |
| MS.gene90984.t1 | AT4G36010 | 58.468 | 248 | 90 | 5 | 21 | 255 | 19 | 266 | 7.69e-93 | 278 |
| MS.gene90984.t1 | AT4G36010 | 58.468 | 248 | 90 | 5 | 21 | 255 | 19 | 266 | 7.69e-93 | 278 |
| MS.gene90984.t1 | AT1G19320 | 56.048 | 248 | 98 | 5 | 1 | 239 | 1 | 246 | 4.36e-91 | 271 |
| MS.gene90984.t1 | AT2G17860 | 54.688 | 256 | 102 | 6 | 1 | 245 | 1 | 253 | 3.41e-89 | 267 |
| MS.gene90984.t1 | AT1G75030 | 57.200 | 250 | 92 | 8 | 1 | 241 | 1 | 244 | 3.92e-89 | 266 |
| MS.gene90984.t1 | AT1G75040 | 56.148 | 244 | 98 | 6 | 1 | 240 | 1 | 239 | 2.31e-86 | 259 |
| MS.gene90984.t1 | AT1G75050 | 57.025 | 242 | 91 | 7 | 9 | 241 | 7 | 244 | 2.97e-86 | 259 |
| MS.gene90984.t1 | AT1G18250 | 56.000 | 225 | 92 | 4 | 23 | 242 | 19 | 241 | 1.95e-85 | 257 |
| MS.gene90984.t1 | AT1G18250 | 56.502 | 223 | 90 | 4 | 25 | 242 | 22 | 242 | 2.35e-85 | 257 |
| MS.gene90984.t1 | AT1G73620 | 56.250 | 224 | 91 | 4 | 23 | 241 | 40 | 261 | 3.11e-84 | 255 |
| MS.gene90984.t1 | AT4G38670 | 55.556 | 243 | 97 | 6 | 9 | 240 | 5 | 247 | 3.13e-83 | 253 |
| MS.gene90984.t1 | AT4G38670 | 55.556 | 243 | 97 | 6 | 9 | 240 | 5 | 247 | 3.13e-83 | 253 |
| MS.gene90984.t1 | AT4G38670 | 58.482 | 224 | 84 | 5 | 26 | 240 | 8 | 231 | 8.75e-83 | 251 |
| MS.gene90984.t1 | AT5G24620 | 52.419 | 248 | 102 | 6 | 25 | 257 | 25 | 271 | 8.04e-82 | 254 |
| MS.gene90984.t1 | AT5G24620 | 52.419 | 248 | 102 | 6 | 25 | 257 | 80 | 326 | 1.41e-81 | 255 |
| MS.gene90984.t1 | AT5G24620 | 52.419 | 248 | 102 | 6 | 25 | 257 | 101 | 347 | 2.03e-81 | 255 |
| MS.gene90984.t1 | AT4G36000 | 60.000 | 215 | 73 | 6 | 101 | 314 | 1 | 203 | 2.69e-76 | 233 |
| MS.gene90984.t1 | AT4G36000 | 60.000 | 215 | 73 | 6 | 101 | 314 | 1 | 203 | 2.69e-76 | 233 |
| MS.gene90984.t1 | AT1G77700 | 49.576 | 236 | 109 | 6 | 9 | 241 | 45 | 273 | 1.59e-74 | 232 |
| MS.gene90984.t1 | AT1G77700 | 49.587 | 242 | 111 | 7 | 4 | 241 | 39 | 273 | 3.31e-74 | 231 |
| MS.gene90984.t1 | AT1G77700 | 51.351 | 222 | 98 | 6 | 23 | 241 | 87 | 301 | 1.09e-73 | 231 |
| MS.gene90984.t1 | AT5G38280 | 47.131 | 244 | 113 | 5 | 21 | 248 | 21 | 264 | 1.65e-72 | 236 |
| MS.gene90984.t1 | AT5G38280 | 47.131 | 244 | 113 | 5 | 21 | 248 | 21 | 264 | 2.46e-72 | 236 |
| MS.gene90984.t1 | AT5G40020 | 43.426 | 251 | 132 | 4 | 1 | 242 | 1 | 250 | 6.40e-68 | 213 |
| MS.gene90984.t1 | AT2G28790 | 47.755 | 245 | 115 | 8 | 4 | 239 | 33 | 273 | 2.00e-65 | 207 |
| MS.gene90984.t1 | AT2G28790 | 47.755 | 245 | 115 | 8 | 4 | 239 | 8 | 248 | 2.24e-65 | 206 |
| MS.gene90984.t1 | AT5G02140 | 45.992 | 237 | 121 | 5 | 10 | 240 | 6 | 241 | 1.68e-64 | 205 |
| MS.gene90984.t1 | AT5G02140 | 45.992 | 237 | 121 | 5 | 10 | 240 | 6 | 241 | 2.29e-64 | 203 |
| MS.gene90984.t1 | AT4G18253 | 39.834 | 241 | 136 | 3 | 9 | 245 | 8 | 243 | 5.47e-55 | 179 |
| MS.gene90984.t1 | AT4G11650 | 43.846 | 260 | 122 | 12 | 2 | 257 | 3 | 242 | 5.83e-53 | 174 |
| MS.gene90984.t1 | AT1G70250 | 39.764 | 254 | 130 | 8 | 26 | 266 | 146 | 389 | 1.07e-51 | 182 |
| MS.gene90984.t1 | AT4G18250 | 40.506 | 237 | 132 | 5 | 23 | 254 | 55 | 287 | 1.62e-44 | 161 |
| MS.gene90984.t1 | AT5G24620 | 51.429 | 140 | 55 | 4 | 131 | 257 | 15 | 154 | 3.44e-39 | 140 |
| MS.gene90984.t1 | AT2G24810 | 61.039 | 77 | 27 | 1 | 166 | 239 | 116 | 192 | 8.46e-26 | 102 |
Find 103 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGTTGGTCCGGCCGGTTC+TGG | 0.121811 | 4.2:+34877311 | MS.gene90984:CDS |
| TCTGCATTTGTTTACTCTTT+TGG | 0.167211 | 4.2:+34878739 | MS.gene90984:CDS |
| GTGAACTCAGCTAGGGTTGC+TGG | 0.336395 | 4.2:-34877436 | None:intergenic |
| CCAGGAGCAGGGACAGTGAT+AGG | 0.340612 | 4.2:+34878523 | MS.gene90984:CDS |
| ACTGTCCCTGCTCCTGGTAT+TGG | 0.357647 | 4.2:-34878517 | None:intergenic |
| CCCATGATTGTTGAAGGTTC+TGG | 0.359030 | 4.2:+34877517 | MS.gene90984:CDS |
| TTTATTTACCTTGGAGAAGA+TGG | 0.363744 | 4.2:-34877823 | None:intergenic |
| CGGTTGGTCCGGCCGGTTCT+GGG | 0.371851 | 4.2:+34877312 | MS.gene90984:CDS |
| CCAGAACCGGCCGGACCAAC+CGG | 0.372349 | 4.2:-34877311 | None:intergenic |
| GGTATTGGTGTTGAGGTCAT+TGG | 0.375177 | 4.2:-34878502 | None:intergenic |
| GTTGAGGTCATTGGAGTTGT+TGG | 0.375805 | 4.2:-34878493 | None:intergenic |
| TCAACTCCGCCGGACATTGC+TGG | 0.377638 | 4.2:-34877585 | None:intergenic |
| TAAGCGTAGCTATACGATCT+AGG | 0.389947 | 4.2:-34877742 | None:intergenic |
| GTTGGAACCGGATCTGAAAA+TGG | 0.394225 | 4.2:+34878556 | MS.gene90984:CDS |
| TCAGATCCGGTTCCAACCTC+AGG | 0.394936 | 4.2:-34878550 | None:intergenic |
| CTCCAGCCGGTTGGTCCGGC+CGG | 0.396644 | 4.2:+34877305 | MS.gene90984:CDS |
| GGTGAGACATGAACCGGTTC+CGG | 0.402255 | 4.2:-34877362 | None:intergenic |
| TACGACGTGAGTCTCGTTGA+TGG | 0.402827 | 4.2:+34877484 | MS.gene90984:CDS |
| CAAGCTCCAGCCGGTTGGTC+CGG | 0.411921 | 4.2:+34877301 | MS.gene90984:CDS |
| GGCCGGTTCTGGGCTCGAAC+CGG | 0.412457 | 4.2:+34877322 | MS.gene90984:CDS |
| AAGAGTGCGTGTGAGGCTTT+TGG | 0.417712 | 4.2:+34877631 | MS.gene90984:CDS |
| AAACCGGTGCTTCCGAGTGT+TGG | 0.422655 | 4.2:-34877247 | None:intergenic |
| ACAAATGTGCCTACACAGTA+TGG | 0.422746 | 4.2:+34877197 | MS.gene90984:CDS |
| AACCGGTGCTTCCGAGTGTT+GGG | 0.429937 | 4.2:-34877246 | None:intergenic |
| ACCAGAACCTTCAACAATCA+TGG | 0.434467 | 4.2:-34877518 | None:intergenic |
| ATGGTTCACCGGCTACTTGT+AGG | 0.436214 | 4.2:+34877683 | MS.gene90984:CDS |
| TCGGGTATGTGTGAGTCCAC+CGG | 0.437031 | 4.2:+34877544 | MS.gene90984:CDS |
| AATCTACCCATGATTGTTGA+AGG | 0.439747 | 4.2:+34877511 | MS.gene90984:CDS |
| AACCGGTTCGAGCCCAGAAC+CGG | 0.440678 | 4.2:-34877324 | None:intergenic |
| AACTTCGACGGATCCGGAAC+CGG | 0.447908 | 4.2:+34877349 | MS.gene90984:CDS |
| GTTGAAGGTTCTGGTGGGTC+GGG | 0.448370 | 4.2:+34877526 | MS.gene90984:CDS |
| CCAGCATTTGCGAGAATACC+TGG | 0.448703 | 4.2:-34877220 | None:intergenic |
| TTCTTGTGGAAGCTCGAAAC+CGG | 0.455126 | 4.2:-34877263 | None:intergenic |
| CCTATCACTGTCCCTGCTCC+TGG | 0.456736 | 4.2:-34878523 | None:intergenic |
| GAGTTCACTCTTGGCACTAT+AGG | 0.458610 | 4.2:+34877451 | MS.gene90984:CDS |
| TGGATCATATTTAGCTGGAT+TGG | 0.461151 | 4.2:+34878687 | MS.gene90984:CDS |
| AACCGGCCGGACCAACCGGC+TGG | 0.468762 | 4.2:-34877307 | None:intergenic |
| TTGTAGGCCGTCGATTTACT+CGG | 0.469663 | 4.2:+34877699 | MS.gene90984:CDS |
| CGGGTATGTGTGAGTCCACC+GGG | 0.470901 | 4.2:+34877545 | MS.gene90984:CDS |
| GGTTGCTGGTGGTGCAGCTC+CGG | 0.475246 | 4.2:-34877422 | None:intergenic |
| CCTTGGAGAAGATGGACAAA+AGG | 0.482274 | 4.2:-34877815 | None:intergenic |
| TGTTGAAGGTTCTGGTGGGT+CGG | 0.482817 | 4.2:+34877525 | MS.gene90984:CDS |
| GCAGATGGATCATATTTAGC+TGG | 0.484088 | 4.2:+34878682 | MS.gene90984:intron |
| CGCACTTTCCAAGCTCCAGC+CGG | 0.485696 | 4.2:+34877292 | MS.gene90984:CDS |
| GGTTGCAACTTCGACGGATC+CGG | 0.487957 | 4.2:+34877343 | MS.gene90984:CDS |
| CGGACCAACCGGCTGGAGCT+TGG | 0.491158 | 4.2:-34877300 | None:intergenic |
| GGGACTCCTGAGGTTGGAAC+CGG | 0.499529 | 4.2:+34878544 | MS.gene90984:CDS |
| CATGTTTGAGCCACAGTCTC+CGG | 0.501661 | 4.2:-34877383 | None:intergenic |
| GGATCTGAACCAGCAATGTC+CGG | 0.501693 | 4.2:+34877576 | MS.gene90984:CDS |
| TGCTCCTGGTATTGGTGTTG+AGG | 0.514274 | 4.2:-34878509 | None:intergenic |
| GGATCCGTCGAAGTTGCAAC+CGG | 0.520508 | 4.2:-34877341 | None:intergenic |
| GTCTCCGGTGAGACATGAAC+CGG | 0.520675 | 4.2:-34877368 | None:intergenic |
| ACCCTAGCTGAGTTCACTCT+TGG | 0.527571 | 4.2:+34877442 | MS.gene90984:CDS |
| CCAGGTATTCTCGCAAATGC+TGG | 0.530746 | 4.2:+34877220 | MS.gene90984:CDS |
| ATGGTAGAATGCAACGGTGC+CGG | 0.536138 | 4.2:+34877403 | MS.gene90984:CDS |
| GTGATAGGGACTCCTGAGGT+TGG | 0.541020 | 4.2:+34878538 | MS.gene90984:CDS |
| AAGCGTAGCTATACGATCTA+GGG | 0.544232 | 4.2:-34877741 | None:intergenic |
| AGCCCAACACTCGGAAGCAC+CGG | 0.545623 | 4.2:+34877244 | MS.gene90984:CDS |
| CTTTCCAAGCTCCAGCCGGT+TGG | 0.546315 | 4.2:+34877296 | MS.gene90984:CDS |
| AAAGAGAGTGATATAAGTTG+AGG | 0.549260 | 4.2:-34877025 | None:intergenic |
| TATTGTTGTAGTGGCGCGTA+TGG | 0.551438 | 4.2:+34877664 | MS.gene90984:CDS |
| TGCCAAGAGTGAACTCAGCT+AGG | 0.556861 | 4.2:-34877444 | None:intergenic |
| ATGATTGTTGAAGGTTCTGG+TGG | 0.557532 | 4.2:+34877520 | MS.gene90984:CDS |
| TCAACACCAATACCAGGAGC+AGG | 0.558407 | 4.2:+34878511 | MS.gene90984:CDS |
| GCCAAGAGTGAACTCAGCTA+GGG | 0.562984 | 4.2:-34877443 | None:intergenic |
| CGCGTGTAAGAGTGCGTGTG+AGG | 0.564237 | 4.2:+34877624 | MS.gene90984:CDS |
| TATTTAGCTGGATTGGCCAT+GGG | 0.568640 | 4.2:+34878694 | MS.gene90984:CDS |
| CAGGAGCAGGGACAGTGATA+GGG | 0.571920 | 4.2:+34878524 | MS.gene90984:CDS |
| TCTGAAGCTCTCAACTCCGC+CGG | 0.574441 | 4.2:-34877595 | None:intergenic |
| CGGAGACTGTGGCTCAAACA+TGG | 0.576529 | 4.2:+34877384 | MS.gene90984:CDS |
| TGTGCCTACACAGTATGGCC+AGG | 0.579329 | 4.2:+34877202 | MS.gene90984:CDS |
| AACATTTCCGAGTAAATCGA+CGG | 0.580067 | 4.2:-34877706 | None:intergenic |
| TAGTGGCGCGTATGGTTCAC+CGG | 0.583066 | 4.2:+34877672 | MS.gene90984:CDS |
| CCAGAACCTTCAACAATCAT+GGG | 0.586909 | 4.2:-34877517 | None:intergenic |
| TGCAGATGAAGTTGTTGTAG+AGG | 0.589695 | 4.2:-34878722 | None:intergenic |
| ATATTTAGCTGGATTGGCCA+TGG | 0.590981 | 4.2:+34878693 | MS.gene90984:CDS |
| TCATGTCTCACCGGAGACTG+TGG | 0.594100 | 4.2:+34877373 | MS.gene90984:CDS |
| GTTCAGATCCGACGTACACC+CGG | 0.602695 | 4.2:-34877563 | None:intergenic |
| GCGGAGTTGAGAGCTTCAGA+TGG | 0.605619 | 4.2:+34877598 | MS.gene90984:CDS |
| TTAGCTGGATTGGCCATGGG+AGG | 0.610887 | 4.2:+34878697 | MS.gene90984:CDS |
| GGTTCGAGCCCAGAACCGGC+CGG | 0.616663 | 4.2:-34877320 | None:intergenic |
| ATGACCTCAACACCAATACC+AGG | 0.616871 | 4.2:+34878505 | MS.gene90984:CDS |
| TGTTGTAGAGGAGCCTCCCA+TGG | 0.618276 | 4.2:-34878710 | None:intergenic |
| AGTCCTGAGTATTGTTGTAG+TGG | 0.630959 | 4.2:+34877655 | MS.gene90984:CDS |
| AATGCTGGTAGCCCAACACT+CGG | 0.633231 | 4.2:+34877235 | MS.gene90984:CDS |
| CGAACCGGTTGCAACTTCGA+CGG | 0.637688 | 4.2:+34877337 | MS.gene90984:CDS |
| TGGAGCTTGGAAAGTGCGAG+TGG | 0.641087 | 4.2:-34877287 | None:intergenic |
| ATCGACGGCCTACAAGTAGC+CGG | 0.644323 | 4.2:-34877691 | None:intergenic |
| GCGCCACTACAACAATACTC+AGG | 0.648242 | 4.2:-34877658 | None:intergenic |
| AATACCTGGCCATACTGTGT+AGG | 0.651875 | 4.2:-34877206 | None:intergenic |
| GGAACCGGTTCATGTCTCAC+CGG | 0.654841 | 4.2:+34877364 | MS.gene90984:CDS |
| TCAAACATGGTAGAATGCAA+CGG | 0.654931 | 4.2:+34877397 | MS.gene90984:CDS |
| AGAAGATGGACAAAAGGTAA+CGG | 0.655103 | 4.2:-34877809 | None:intergenic |
| TGAGTCCACCGGGTGTACGT+CGG | 0.658731 | 4.2:+34877555 | MS.gene90984:CDS |
| AACTCAGCTAGGGTTGCTGG+TGG | 0.659719 | 4.2:-34877433 | None:intergenic |
| TGATTGTTGAAGGTTCTGGT+GGG | 0.661500 | 4.2:+34877521 | MS.gene90984:CDS |
| CAACACCAATACCAGGAGCA+GGG | 0.663691 | 4.2:+34878512 | MS.gene90984:CDS |
| TGAAAATGGAGTTCAATACA+CGG | 0.669710 | 4.2:+34878570 | MS.gene90984:CDS |
| AAAGTGCGAGTGGTTTCTTG+TGG | 0.674516 | 4.2:-34877277 | None:intergenic |
| GAAAATGGAGTTCAATACAC+GGG | 0.685341 | 4.2:+34878571 | MS.gene90984:CDS |
| GACAGTGATAGGGACTCCTG+AGG | 0.705413 | 4.2:+34878534 | MS.gene90984:CDS |
| TCTGAACCAGCAATGTCCGG+CGG | 0.706133 | 4.2:+34877579 | MS.gene90984:CDS |
| CAGATCCGACGTACACCCGG+TGG | 0.761713 | 4.2:-34877560 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTAAAACATAGACAA+AGG | - | chr4.2:34877088-34877107 | None:intergenic | 15.0% |
| !! | ATTAATAGTAGATTTATTGT+TGG | + | chr4.2:34878195-34878214 | MS.gene90984:intron | 15.0% |
| !!! | ATGTTAAAAGTATGTTAATT+AGG | + | chr4.2:34877872-34877891 | MS.gene90984:intron | 15.0% |
| !!! | TGTTAAAAGTATGTTAATTA+GGG | + | chr4.2:34877873-34877892 | MS.gene90984:intron | 15.0% |
| !!! | TTGATTAATTTTATTTACCT+TGG | - | chr4.2:34877835-34877854 | None:intergenic | 15.0% |
| !!! | AATTTTGTGATTGTAGAAAT+TGG | + | chr4.2:34878418-34878437 | MS.gene90984:intron | 20.0% |
| !!! | TTTTTAACATGTTTTTGTTC+AGG | + | chr4.2:34877145-34877164 | MS.gene90984:intron | 20.0% |
| ! | GTCAGAAATTATTCTTCAAA+AGG | - | chr4.2:34877994-34878013 | None:intergenic | 25.0% |
| ! | TAACAACATTGTCGTATAAT+GGG | - | chr4.2:34877900-34877919 | None:intergenic | 25.0% |
| ! | TTAACAACATTGTCGTATAA+TGG | - | chr4.2:34877901-34877920 | None:intergenic | 25.0% |
| !!! | TTGTTGGCATTTAATTTGTT+AGG | + | chr4.2:34878211-34878230 | MS.gene90984:intron | 25.0% |
| AAAGAGAGTGATATAAGTTG+AGG | - | chr4.2:34877028-34877047 | None:intergenic | 30.0% | |
| AAAGTCATGTAATGTCATCA+TGG | + | chr4.2:34878062-34878081 | MS.gene90984:intron | 30.0% | |
| AACTAGTCATCTTAAGCAAA+CGG | + | chr4.2:34878254-34878273 | MS.gene90984:intron | 30.0% | |
| ATCTTAAGCAAACGGTTAAA+TGG | + | chr4.2:34878262-34878281 | MS.gene90984:intron | 30.0% | |
| ATTTCCACTTTCAGATTTGT+AGG | + | chr4.2:34878113-34878132 | MS.gene90984:intron | 30.0% | |
| GATTGTAACAACTTGTGATA+TGG | + | chr4.2:34878443-34878462 | MS.gene90984:intron | 30.0% | |
| TGAAAATGGAGTTCAATACA+CGG | + | chr4.2:34878570-34878589 | MS.gene90984:CDS | 30.0% | |
| TTAAAAACTAAGTTCCCCTT+TGG | - | chr4.2:34878165-34878184 | None:intergenic | 30.0% | |
| TTTATTTACCTTGGAGAAGA+TGG | - | chr4.2:34877826-34877845 | None:intergenic | 30.0% | |
| TTTCCACTTTCAGATTTGTA+GGG | + | chr4.2:34878114-34878133 | MS.gene90984:intron | 30.0% | |
| ! | TCTGCATTTGTTTACTCTTT+TGG | + | chr4.2:34878739-34878758 | MS.gene90984:CDS | 30.0% |
| !! | AAAGGTTGTGTTTTTACCTT+TGG | - | chr4.2:34877070-34877089 | None:intergenic | 30.0% |
| !! | AAGGGGAACTTAGTTTTTAA+TGG | + | chr4.2:34878165-34878184 | MS.gene90984:intron | 30.0% |
| !! | AAGGTTGTGTTTTTACCTTT+GGG | - | chr4.2:34877069-34877088 | None:intergenic | 30.0% |
| !!! | GTTAGCGTTTTTTGTTTTGA+AGG | - | chr4.2:34877115-34877134 | None:intergenic | 30.0% |
| AAACCCTACAAATCTGAAAG+TGG | - | chr4.2:34878120-34878139 | None:intergenic | 35.0% | |
| AACATTTCCGAGTAAATCGA+CGG | - | chr4.2:34877709-34877728 | None:intergenic | 35.0% | |
| AATCTACCCATGATTGTTGA+AGG | + | chr4.2:34877511-34877530 | MS.gene90984:CDS | 35.0% | |
| AGAAGATGGACAAAAGGTAA+CGG | - | chr4.2:34877812-34877831 | None:intergenic | 35.0% | |
| ATAAAATCCCACTTGCTCAA+AGG | + | chr4.2:34878355-34878374 | MS.gene90984:intron | 35.0% | |
| ATTCAGTTCCCGTAAATTCA+GGG | + | chr4.2:34878614-34878633 | MS.gene90984:intron | 35.0% | |
| GAAAATGGAGTTCAATACAC+GGG | + | chr4.2:34878571-34878590 | MS.gene90984:CDS | 35.0% | |
| GTTTGTTTCCATGTAACCAT+AGG | + | chr4.2:34878136-34878155 | MS.gene90984:intron | 35.0% | |
| TAAAATCCCACTTGCTCAAA+GGG | + | chr4.2:34878356-34878375 | MS.gene90984:intron | 35.0% | |
| TATTCAGTTCCCGTAAATTC+AGG | + | chr4.2:34878613-34878632 | MS.gene90984:intron | 35.0% | |
| TCAAACATGGTAGAATGCAA+CGG | + | chr4.2:34877397-34877416 | MS.gene90984:CDS | 35.0% | |
| TGGATCATATTTAGCTGGAT+TGG | + | chr4.2:34878687-34878706 | MS.gene90984:CDS | 35.0% | |
| ! | TACTTTTACTTGTACTGCTG+CGG | + | chr4.2:34877780-34877799 | MS.gene90984:CDS | 35.0% |
| ! | TTGAACTCCATTTTCAGATC+CGG | - | chr4.2:34878566-34878585 | None:intergenic | 35.0% |
| !! | TGTTTTTGTTCAGGTATCAC+TGG | + | chr4.2:34877154-34877173 | MS.gene90984:intron | 35.0% |
| AAGCGTAGCTATACGATCTA+GGG | - | chr4.2:34877744-34877763 | None:intergenic | 40.0% | |
| ACAAATGTGCCTACACAGTA+TGG | + | chr4.2:34877197-34877216 | MS.gene90984:CDS | 40.0% | |
| ACCAGAACCTTCAACAATCA+TGG | - | chr4.2:34877521-34877540 | None:intergenic | 40.0% | |
| ATATGATCCATCTGCAAGCA+TGG | - | chr4.2:34878677-34878696 | None:intergenic | 40.0% | |
| ATGTAACCATAGGTAGCCAA+AGG | + | chr4.2:34878146-34878165 | MS.gene90984:intron | 40.0% | |
| CCAGAACCTTCAACAATCAT+GGG | - | chr4.2:34877520-34877539 | None:intergenic | 40.0% | |
| GCAGATGGATCATATTTAGC+TGG | + | chr4.2:34878682-34878701 | MS.gene90984:intron | 40.0% | |
| TAAGCGTAGCTATACGATCT+AGG | - | chr4.2:34877745-34877764 | None:intergenic | 40.0% | |
| TCAGCATCTAATTCAGGATC+AGG | + | chr4.2:34878643-34878662 | MS.gene90984:intron | 40.0% | |
| TCCTGAATTAGATGCTGATC+CGG | - | chr4.2:34878641-34878660 | None:intergenic | 40.0% | |
| TGCAGATGAAGTTGTTGTAG+AGG | - | chr4.2:34878725-34878744 | None:intergenic | 40.0% | |
| TGTAACCATAGGTAGCCAAA+GGG | + | chr4.2:34878147-34878166 | MS.gene90984:intron | 40.0% | |
| TTTGGCTACCTATGGTTACA+TGG | - | chr4.2:34878147-34878166 | None:intergenic | 40.0% | |
| ! | AGTCCTGAGTATTGTTGTAG+TGG | + | chr4.2:34877655-34877674 | MS.gene90984:CDS | 40.0% |
| ! | ATGATTGTTGAAGGTTCTGG+TGG | + | chr4.2:34877520-34877539 | MS.gene90984:CDS | 40.0% |
| ! | TGATTGTTGAAGGTTCTGGT+GGG | + | chr4.2:34877521-34877540 | MS.gene90984:CDS | 40.0% |
| !! | ATATTTAGCTGGATTGGCCA+TGG | + | chr4.2:34878693-34878712 | MS.gene90984:CDS | 40.0% |
| !! | TATTTAGCTGGATTGGCCAT+GGG | + | chr4.2:34878694-34878713 | MS.gene90984:CDS | 40.0% |
| !! | TGTTTTTACCTTTGGGAGTG+AGG | - | chr4.2:34877062-34877081 | None:intergenic | 40.0% |
| AAAGTGCGAGTGGTTTCTTG+TGG | - | chr4.2:34877280-34877299 | None:intergenic | 45.0% | |
| AATACCTGGCCATACTGTGT+AGG | - | chr4.2:34877209-34877228 | None:intergenic | 45.0% | |
| ACACTACCCTTTGAGCAAGT+GGG | - | chr4.2:34878365-34878384 | None:intergenic | 45.0% | |
| ACGGGAACTGAATACCCAAT+GGG | - | chr4.2:34878607-34878626 | None:intergenic | 45.0% | |
| ATGACCTCAACACCAATACC+AGG | + | chr4.2:34878505-34878524 | MS.gene90984:CDS | 45.0% | |
| CCCATGATTGTTGAAGGTTC+TGG | + | chr4.2:34877517-34877536 | MS.gene90984:CDS | 45.0% | |
| CCTTGGAGAAGATGGACAAA+AGG | - | chr4.2:34877818-34877837 | None:intergenic | 45.0% | |
| GAGTTCACTCTTGGCACTAT+AGG | + | chr4.2:34877451-34877470 | MS.gene90984:CDS | 45.0% | |
| GCATCTAATTCAGGATCAGG+AGG | + | chr4.2:34878646-34878665 | MS.gene90984:intron | 45.0% | |
| GTAACCATAGGTAGCCAAAG+GGG | + | chr4.2:34878148-34878167 | MS.gene90984:intron | 45.0% | |
| GTTGAGGTCATTGGAGTTGT+TGG | - | chr4.2:34878496-34878515 | None:intergenic | 45.0% | |
| GTTGGAACCGGATCTGAAAA+TGG | + | chr4.2:34878556-34878575 | MS.gene90984:CDS | 45.0% | |
| TACACTACCCTTTGAGCAAG+TGG | - | chr4.2:34878366-34878385 | None:intergenic | 45.0% | |
| TACGGGAACTGAATACCCAA+TGG | - | chr4.2:34878608-34878627 | None:intergenic | 45.0% | |
| TATTGTTGTAGTGGCGCGTA+TGG | + | chr4.2:34877664-34877683 | MS.gene90984:CDS | 45.0% | |
| TCCGGATCAGCATCTAATTC+AGG | + | chr4.2:34878637-34878656 | MS.gene90984:intron | 45.0% | |
| TGATCCGGACCCTGAATTTA+CGG | - | chr4.2:34878626-34878645 | None:intergenic | 45.0% | |
| TTCTTGTGGAAGCTCGAAAC+CGG | - | chr4.2:34877266-34877285 | None:intergenic | 45.0% | |
| ! | CCTTTTGTCCATCTTCTCCA+AGG | + | chr4.2:34877815-34877834 | MS.gene90984:CDS | 45.0% |
| ! | CTTCTTTTCCTCACTCCCAA+AGG | + | chr4.2:34877051-34877070 | MS.gene90984:CDS | 45.0% |
| !! | GGTATTGGTGTTGAGGTCAT+TGG | - | chr4.2:34878505-34878524 | None:intergenic | 45.0% |
| !! | TTGTAGGCCGTCGATTTACT+CGG | + | chr4.2:34877699-34877718 | MS.gene90984:CDS | 45.0% |
| AATGCTGGTAGCCCAACACT+CGG | + | chr4.2:34877235-34877254 | MS.gene90984:CDS | 50.0% | |
| ACCCTAGCTGAGTTCACTCT+TGG | + | chr4.2:34877442-34877461 | MS.gene90984:CDS | 50.0% | |
| AGTTCCCCTTTGGCTACCTA+TGG | - | chr4.2:34878155-34878174 | None:intergenic | 50.0% | |
| ATGGTAGAATGCAACGGTGC+CGG | + | chr4.2:34877403-34877422 | MS.gene90984:CDS | 50.0% | |
| CAACACCAATACCAGGAGCA+GGG | + | chr4.2:34878512-34878531 | MS.gene90984:CDS | 50.0% | |
| CATGTTTGAGCCACAGTCTC+CGG | - | chr4.2:34877386-34877405 | None:intergenic | 50.0% | |
| CCAGCATTTGCGAGAATACC+TGG | - | chr4.2:34877223-34877242 | None:intergenic | 50.0% | |
| CCAGGTATTCTCGCAAATGC+TGG | + | chr4.2:34877220-34877239 | MS.gene90984:CDS | 50.0% | |
| GATCCGGACCCTGAATTTAC+GGG | - | chr4.2:34878625-34878644 | None:intergenic | 50.0% | |
| GCCAAGAGTGAACTCAGCTA+GGG | - | chr4.2:34877446-34877465 | None:intergenic | 50.0% | |
| GCGCCACTACAACAATACTC+AGG | - | chr4.2:34877661-34877680 | None:intergenic | 50.0% | |
| GGAGAAACCATGCTTGCAGA+TGG | + | chr4.2:34878667-34878686 | MS.gene90984:intron | 50.0% | |
| GGATCTGAACCAGCAATGTC+CGG | + | chr4.2:34877576-34877595 | MS.gene90984:CDS | 50.0% | |
| GTTCCCGTAAATTCAGGGTC+CGG | + | chr4.2:34878619-34878638 | MS.gene90984:intron | 50.0% | |
| TACGACGTGAGTCTCGTTGA+TGG | + | chr4.2:34877484-34877503 | MS.gene90984:CDS | 50.0% | |
| TCAACACCAATACCAGGAGC+AGG | + | chr4.2:34878511-34878530 | MS.gene90984:CDS | 50.0% | |
| TGCCAAGAGTGAACTCAGCT+AGG | - | chr4.2:34877447-34877466 | None:intergenic | 50.0% | |
| ! | ATGGTTCACCGGCTACTTGT+AGG | + | chr4.2:34877683-34877702 | MS.gene90984:CDS | 50.0% |
| ! | TGTTGAAGGTTCTGGTGGGT+CGG | + | chr4.2:34877525-34877544 | MS.gene90984:CDS | 50.0% |
| !! | AAGAGTGCGTGTGAGGCTTT+TGG | + | chr4.2:34877631-34877650 | MS.gene90984:CDS | 50.0% |
| !! | TGCTCCTGGTATTGGTGTTG+AGG | - | chr4.2:34878512-34878531 | None:intergenic | 50.0% |
| AAACCGGTGCTTCCGAGTGT+TGG | - | chr4.2:34877250-34877269 | None:intergenic | 55.0% | |
| AACCGGTGCTTCCGAGTGTT+GGG | - | chr4.2:34877249-34877268 | None:intergenic | 55.0% | |
| AACTCAGCTAGGGTTGCTGG+TGG | - | chr4.2:34877436-34877455 | None:intergenic | 55.0% | |
| AACTTCGACGGATCCGGAAC+CGG | + | chr4.2:34877349-34877368 | MS.gene90984:CDS | 55.0% | |
| ACGGGTACAGACACACCCAT+TGG | + | chr4.2:34878589-34878608 | MS.gene90984:intron | 55.0% | |
| ACTGTCCCTGCTCCTGGTAT+TGG | - | chr4.2:34878520-34878539 | None:intergenic | 55.0% | |
| ATCGACGGCCTACAAGTAGC+CGG | - | chr4.2:34877694-34877713 | None:intergenic | 55.0% | |
| CAGGAGCAGGGACAGTGATA+GGG | + | chr4.2:34878524-34878543 | MS.gene90984:CDS | 55.0% | |
| CGAACCGGTTGCAACTTCGA+CGG | + | chr4.2:34877337-34877356 | MS.gene90984:CDS | 55.0% | |
| CGGAGACTGTGGCTCAAACA+TGG | + | chr4.2:34877384-34877403 | MS.gene90984:CDS | 55.0% | |
| CGGGTACAGACACACCCATT+GGG | + | chr4.2:34878590-34878609 | MS.gene90984:intron | 55.0% | |
| GACAGTGATAGGGACTCCTG+AGG | + | chr4.2:34878534-34878553 | MS.gene90984:CDS | 55.0% | |
| GCGGAGTTGAGAGCTTCAGA+TGG | + | chr4.2:34877598-34877617 | MS.gene90984:CDS | 55.0% | |
| GGATCCGTCGAAGTTGCAAC+CGG | - | chr4.2:34877344-34877363 | None:intergenic | 55.0% | |
| GGTTGCAACTTCGACGGATC+CGG | + | chr4.2:34877343-34877362 | MS.gene90984:CDS | 55.0% | |
| GTCTCCGGTGAGACATGAAC+CGG | - | chr4.2:34877371-34877390 | None:intergenic | 55.0% | |
| GTGAACTCAGCTAGGGTTGC+TGG | - | chr4.2:34877439-34877458 | None:intergenic | 55.0% | |
| GTGATAGGGACTCCTGAGGT+TGG | + | chr4.2:34878538-34878557 | MS.gene90984:CDS | 55.0% | |
| GTTCAGATCCGACGTACACC+CGG | - | chr4.2:34877566-34877585 | None:intergenic | 55.0% | |
| TAGTGGCGCGTATGGTTCAC+CGG | + | chr4.2:34877672-34877691 | MS.gene90984:CDS | 55.0% | |
| TCAGATCCGGTTCCAACCTC+AGG | - | chr4.2:34878553-34878572 | None:intergenic | 55.0% | |
| TCATGTCTCACCGGAGACTG+TGG | + | chr4.2:34877373-34877392 | MS.gene90984:CDS | 55.0% | |
| TCGGGTATGTGTGAGTCCAC+CGG | + | chr4.2:34877544-34877563 | MS.gene90984:CDS | 55.0% | |
| TCTGAACCAGCAATGTCCGG+CGG | + | chr4.2:34877579-34877598 | MS.gene90984:CDS | 55.0% | |
| TGTGCCTACACAGTATGGCC+AGG | + | chr4.2:34877202-34877221 | MS.gene90984:CDS | 55.0% | |
| TGTTGTAGAGGAGCCTCCCA+TGG | - | chr4.2:34878713-34878732 | None:intergenic | 55.0% | |
| ! | GGAACCGGTTCATGTCTCAC+CGG | + | chr4.2:34877364-34877383 | MS.gene90984:CDS | 55.0% |
| ! | GGTGAGACATGAACCGGTTC+CGG | - | chr4.2:34877365-34877384 | None:intergenic | 55.0% |
| ! | GTTGAAGGTTCTGGTGGGTC+GGG | + | chr4.2:34877526-34877545 | MS.gene90984:CDS | 55.0% |
| ! | TCTGAAGCTCTCAACTCCGC+CGG | - | chr4.2:34877598-34877617 | None:intergenic | 55.0% |
| ! | TGGAGCTTGGAAAGTGCGAG+TGG | - | chr4.2:34877290-34877309 | None:intergenic | 55.0% |
| !! | TTAGCTGGATTGGCCATGGG+AGG | + | chr4.2:34878697-34878716 | MS.gene90984:CDS | 55.0% |
| CCAGGAGCAGGGACAGTGAT+AGG | + | chr4.2:34878523-34878542 | MS.gene90984:CDS | 60.0% | |
| CCTATCACTGTCCCTGCTCC+TGG | - | chr4.2:34878526-34878545 | None:intergenic | 60.0% | |
| CGCACTTTCCAAGCTCCAGC+CGG | + | chr4.2:34877292-34877311 | MS.gene90984:CDS | 60.0% | |
| CGGGTATGTGTGAGTCCACC+GGG | + | chr4.2:34877545-34877564 | MS.gene90984:CDS | 60.0% | |
| CTTTCCAAGCTCCAGCCGGT+TGG | + | chr4.2:34877296-34877315 | MS.gene90984:CDS | 60.0% | |
| GGGACTCCTGAGGTTGGAAC+CGG | + | chr4.2:34878544-34878563 | MS.gene90984:CDS | 60.0% | |
| TCAACTCCGCCGGACATTGC+TGG | - | chr4.2:34877588-34877607 | None:intergenic | 60.0% | |
| TGAGTCCACCGGGTGTACGT+CGG | + | chr4.2:34877555-34877574 | MS.gene90984:CDS | 60.0% | |
| ! | AGCCCAACACTCGGAAGCAC+CGG | + | chr4.2:34877244-34877263 | MS.gene90984:CDS | 60.0% |
| ! | CGCGTGTAAGAGTGCGTGTG+AGG | + | chr4.2:34877624-34877643 | MS.gene90984:CDS | 60.0% |
| !! | AACCGGTTCGAGCCCAGAAC+CGG | - | chr4.2:34877327-34877346 | None:intergenic | 60.0% |
| CAGATCCGACGTACACCCGG+TGG | - | chr4.2:34877563-34877582 | None:intergenic | 65.0% | |
| ! | CAAGCTCCAGCCGGTTGGTC+CGG | + | chr4.2:34877301-34877320 | MS.gene90984:CDS | 65.0% |
| ! | GGTTGCTGGTGGTGCAGCTC+CGG | - | chr4.2:34877425-34877444 | None:intergenic | 65.0% |
| CCAGAACCGGCCGGACCAAC+CGG | - | chr4.2:34877314-34877333 | None:intergenic | 70.0% | |
| CGGACCAACCGGCTGGAGCT+TGG | - | chr4.2:34877303-34877322 | None:intergenic | 70.0% | |
| GGTTCGAGCCCAGAACCGGC+CGG | - | chr4.2:34877323-34877342 | None:intergenic | 70.0% | |
| ! | CGGTTGGTCCGGCCGGTTCT+GGG | + | chr4.2:34877312-34877331 | MS.gene90984:CDS | 70.0% |
| !! | GGCCGGTTCTGGGCTCGAAC+CGG | + | chr4.2:34877322-34877341 | MS.gene90984:CDS | 70.0% |
| AACCGGCCGGACCAACCGGC+TGG | - | chr4.2:34877310-34877329 | None:intergenic | 75.0% | |
| ! | CCGGTTGGTCCGGCCGGTTC+TGG | + | chr4.2:34877311-34877330 | MS.gene90984:CDS | 75.0% |
| ! | CTCCAGCCGGTTGGTCCGGC+CGG | + | chr4.2:34877305-34877324 | MS.gene90984:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 34877012 | 34878789 | 34877012 | ID=MS.gene90984 |
| chr4.2 | mRNA | 34877012 | 34878789 | 34877012 | ID=MS.gene90984.t1;Parent=MS.gene90984 |
| chr4.2 | exon | 34877012 | 34877072 | 34877012 | ID=MS.gene90984.t1.exon1;Parent=MS.gene90984.t1 |
| chr4.2 | CDS | 34877012 | 34877072 | 34877012 | ID=cds.MS.gene90984.t1;Parent=MS.gene90984.t1 |
| chr4.2 | exon | 34877167 | 34877836 | 34877167 | ID=MS.gene90984.t1.exon2;Parent=MS.gene90984.t1 |
| chr4.2 | CDS | 34877167 | 34877836 | 34877167 | ID=cds.MS.gene90984.t1;Parent=MS.gene90984.t1 |
| chr4.2 | exon | 34878474 | 34878592 | 34878474 | ID=MS.gene90984.t1.exon3;Parent=MS.gene90984.t1 |
| chr4.2 | CDS | 34878474 | 34878592 | 34878474 | ID=cds.MS.gene90984.t1;Parent=MS.gene90984.t1 |
| chr4.2 | exon | 34878686 | 34878789 | 34878686 | ID=MS.gene90984.t1.exon4;Parent=MS.gene90984.t1 |
| chr4.2 | CDS | 34878686 | 34878789 | 34878686 | ID=cds.MS.gene90984.t1;Parent=MS.gene90984.t1 |
| Gene Sequence |
| Protein sequence |
