Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051423.t1 | XP_013468123.1 | 97.9 | 474 | 10 | 0 | 1 | 474 | 1 | 474 | 3.30E-276 | 960.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051423.t1 | Q9SCP2 | 69.3 | 473 | 137 | 5 | 1 | 468 | 2 | 471 | 1.0e-188 | 661.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051423.t1 | A0A072VVN7 | 97.9 | 474 | 10 | 0 | 1 | 474 | 1 | 474 | 2.4e-276 | 960.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene051423 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene052367 | 0.809325 | 2.00E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene053416 | 0.81172 | 6.08E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene053417 | 0.810297 | 1.24E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene056041 | 0.822389 | 2.43E-53 | -1.69E-46 |
| MS.gene051423 | MS.gene058827 | 0.80578 | 1.13E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene060473 | 0.815372 | 9.56E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene061260 | 0.806136 | 9.53E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene061275 | 0.837504 | 5.00E-57 | -1.69E-46 |
| MS.gene051423 | MS.gene063037 | 0.802372 | 5.79E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene067030 | 0.810113 | 1.35E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene067039 | 0.81053 | 1.10E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene068190 | 0.821876 | 3.20E-53 | -1.69E-46 |
| MS.gene051423 | MS.gene069090 | 0.803498 | 3.39E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene07048 | 0.814823 | 1.27E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene07051 | 0.812502 | 4.11E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene073862 | 0.8135 | 2.48E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene073863 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene09234 | 0.804331 | 2.27E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene20224 | 0.813993 | 1.93E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene21320 | 0.820123 | 8.10E-53 | -1.69E-46 |
| MS.gene051423 | MS.gene22464 | 0.813288 | 2.76E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene22500 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene23323 | 0.856871 | 2.40E-62 | -1.69E-46 |
| MS.gene051423 | MS.gene24224 | 0.805461 | 1.32E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene26114 | 0.831038 | 2.09E-55 | -1.69E-46 |
| MS.gene051423 | MS.gene26665 | 0.816603 | 5.08E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene27011 | 0.816902 | 4.35E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene27902 | 0.800033 | 1.74E-48 | -1.69E-46 |
| MS.gene051423 | MS.gene28807 | 0.807657 | 4.54E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene28867 | 0.809929 | 1.48E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene35150 | 0.834112 | 3.62E-56 | -1.69E-46 |
| MS.gene051423 | MS.gene35715 | 0.80804 | 3.76E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene36485 | 0.836561 | 8.70E-57 | -1.69E-46 |
| MS.gene051423 | MS.gene38828 | 0.80216 | 6.40E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene40405 | 0.81721 | 3.71E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene44100 | 0.818928 | 1.52E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene47007 | 0.802572 | 5.27E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene47439 | 0.827984 | 1.16E-54 | -1.69E-46 |
| MS.gene051423 | MS.gene48067 | 0.806316 | 8.73E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene50479 | 0.819564 | 1.09E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene50484 | 0.817811 | 2.72E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene50736 | 0.833806 | 4.32E-56 | -1.69E-46 |
| MS.gene051423 | MS.gene53004 | 0.802436 | 5.61E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene55817 | 0.807135 | 5.86E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene57751 | 0.822497 | 2.30E-53 | -1.69E-46 |
| MS.gene051423 | MS.gene57752 | 0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene58234 | 0.824192 | 9.22E-54 | -1.69E-46 |
| MS.gene051423 | MS.gene58754 | 0.818086 | 2.35E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene58835 | 0.80567 | 1.19E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene59357 | 0.808767 | 2.63E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene61977 | 0.847485 | 1.12E-59 | -1.69E-46 |
| MS.gene051423 | MS.gene64538 | 0.802342 | 5.87E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene67576 | 0.801907 | 7.21E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene68361 | 0.841702 | 4.05E-58 | -1.69E-46 |
| MS.gene051423 | MS.gene70141 | 0.803541 | 3.32E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene70403 | 0.8225 | 2.29E-53 | -1.69E-46 |
| MS.gene051423 | MS.gene73305 | 0.809918 | 1.49E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene75220 | 0.802486 | 5.48E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene75567 | 0.804215 | 2.40E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene75579 | 0.80879 | 2.60E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene75642 | 0.818109 | 2.33E-52 | -1.69E-46 |
| MS.gene051423 | MS.gene75737 | 0.814291 | 1.66E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene77475 | 0.807469 | 4.98E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene78972 | 0.812667 | 3.78E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene79921 | 0.823812 | 1.13E-53 | -1.69E-46 |
| MS.gene051423 | MS.gene90732 | 0.809908 | 1.50E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene90984 | 0.804458 | 2.14E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene92758 | 0.810901 | 9.16E-51 | -1.69E-46 |
| MS.gene051423 | MS.gene93102 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene051423 | MS.gene99432 | 0.808569 | 2.90E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051423.t1 | MTR_1g062930 | 97.890 | 474 | 10 | 0 | 1 | 474 | 1 | 474 | 0.0 | 972 |
| MS.gene051423.t1 | MTR_7g102940 | 74.737 | 475 | 109 | 5 | 1 | 472 | 1 | 467 | 0.0 | 696 |
| MS.gene051423.t1 | MTR_1g111590 | 68.916 | 415 | 125 | 1 | 1 | 415 | 1 | 411 | 0.0 | 619 |
| MS.gene051423.t1 | MTR_6g021950 | 60.337 | 416 | 149 | 2 | 2 | 417 | 3 | 402 | 0.0 | 524 |
| MS.gene051423.t1 | MTR_4g104320 | 62.141 | 383 | 137 | 2 | 34 | 415 | 28 | 403 | 2.11e-176 | 501 |
| MS.gene051423.t1 | MTR_1g047370 | 59.948 | 382 | 146 | 1 | 34 | 415 | 72 | 446 | 3.93e-172 | 491 |
| MS.gene051423.t1 | MTR_3g075320 | 59.459 | 407 | 153 | 2 | 9 | 415 | 8 | 402 | 5.90e-170 | 484 |
| MS.gene051423.t1 | MTR_7g059290 | 59.686 | 382 | 147 | 1 | 34 | 415 | 66 | 440 | 6.82e-169 | 483 |
| MS.gene051423.t1 | MTR_3g086310 | 60.471 | 382 | 141 | 3 | 34 | 415 | 28 | 399 | 6.61e-159 | 456 |
| MS.gene051423.t1 | MTR_3g086320 | 54.258 | 411 | 172 | 4 | 2 | 411 | 3 | 398 | 1.20e-151 | 438 |
| MS.gene051423.t1 | MTR_4g107870 | 51.958 | 383 | 174 | 4 | 33 | 411 | 50 | 426 | 1.60e-144 | 421 |
| MS.gene051423.t1 | MTR_5g038510 | 55.524 | 353 | 148 | 2 | 33 | 380 | 61 | 409 | 8.00e-144 | 419 |
| MS.gene051423.t1 | MTR_6g011420 | 52.850 | 386 | 174 | 3 | 33 | 411 | 61 | 445 | 5.68e-143 | 417 |
| MS.gene051423.t1 | MTR_8g468980 | 54.520 | 354 | 153 | 2 | 66 | 411 | 94 | 447 | 7.79e-143 | 417 |
| MS.gene051423.t1 | MTR_5g038490 | 52.756 | 381 | 178 | 2 | 33 | 411 | 61 | 441 | 1.54e-138 | 406 |
| MS.gene051423.t1 | MTR_7g009390 | 50.508 | 394 | 180 | 3 | 33 | 411 | 50 | 443 | 5.74e-136 | 399 |
| MS.gene051423.t1 | MTR_4g132460 | 55.848 | 342 | 147 | 3 | 71 | 411 | 39 | 377 | 4.86e-135 | 395 |
| MS.gene051423.t1 | MTR_2g023990 | 54.121 | 364 | 157 | 4 | 57 | 416 | 49 | 406 | 8.32e-134 | 392 |
| MS.gene051423.t1 | MTR_3g075320 | 61.644 | 292 | 100 | 2 | 9 | 300 | 8 | 287 | 5.87e-123 | 360 |
| MS.gene051423.t1 | MTR_8g078390 | 43.251 | 363 | 196 | 7 | 59 | 415 | 30 | 388 | 2.19e-90 | 281 |
| MS.gene051423.t1 | MTR_8g078310 | 41.962 | 367 | 195 | 8 | 59 | 415 | 30 | 388 | 5.15e-86 | 269 |
| MS.gene051423.t1 | MTR_3g030900 | 41.645 | 377 | 201 | 10 | 45 | 415 | 6 | 369 | 2.46e-84 | 265 |
| MS.gene051423.t1 | MTR_8g078280 | 40.270 | 370 | 200 | 9 | 54 | 415 | 32 | 388 | 6.95e-80 | 253 |
| MS.gene051423.t1 | MTR_8g078350 | 41.873 | 363 | 201 | 7 | 59 | 415 | 30 | 388 | 1.71e-78 | 250 |
| MS.gene051423.t1 | MTR_4g064420 | 40.274 | 365 | 190 | 7 | 54 | 415 | 32 | 371 | 4.59e-78 | 249 |
| MS.gene051423.t1 | MTR_5g019170 | 38.929 | 411 | 215 | 12 | 71 | 473 | 41 | 423 | 3.05e-75 | 243 |
| MS.gene051423.t1 | MTR_5g019160 | 42.090 | 354 | 189 | 10 | 71 | 415 | 41 | 387 | 5.49e-75 | 241 |
| MS.gene051423.t1 | MTR_5g019060 | 42.416 | 356 | 185 | 10 | 71 | 415 | 41 | 387 | 5.85e-75 | 241 |
| MS.gene051423.t1 | MTR_5g035840 | 41.457 | 357 | 187 | 10 | 71 | 415 | 41 | 387 | 1.51e-74 | 239 |
| MS.gene051423.t1 | MTR_5g019090 | 40.741 | 351 | 198 | 8 | 71 | 415 | 41 | 387 | 4.80e-72 | 233 |
| MS.gene051423.t1 | MTR_3g070740 | 54.500 | 200 | 78 | 3 | 213 | 411 | 131 | 318 | 6.57e-68 | 220 |
| MS.gene051423.t1 | MTR_2g023980 | 48.305 | 236 | 89 | 4 | 146 | 380 | 1 | 204 | 3.58e-67 | 218 |
| MS.gene051423.t1 | MTR_1g069950 | 42.963 | 270 | 146 | 4 | 146 | 411 | 1 | 266 | 8.26e-64 | 207 |
| MS.gene051423.t1 | MTR_6g077900 | 41.455 | 275 | 138 | 6 | 104 | 376 | 6 | 259 | 1.27e-51 | 176 |
| MS.gene051423.t1 | MTR_1g115550 | 36.735 | 294 | 160 | 6 | 82 | 374 | 7 | 275 | 2.15e-41 | 150 |
| MS.gene051423.t1 | MTR_1g067450 | 37.389 | 337 | 171 | 10 | 90 | 415 | 64 | 371 | 1.92e-39 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051423.t1 | AT3G53190 | 69.263 | 475 | 134 | 6 | 1 | 468 | 2 | 471 | 0.0 | 644 |
| MS.gene051423.t1 | AT5G04310 | 62.556 | 446 | 153 | 3 | 6 | 437 | 18 | 463 | 0.0 | 559 |
| MS.gene051423.t1 | AT5G04310 | 62.556 | 446 | 153 | 3 | 6 | 437 | 18 | 463 | 0.0 | 559 |
| MS.gene051423.t1 | AT5G04310 | 64.455 | 422 | 138 | 2 | 6 | 415 | 18 | 439 | 0.0 | 554 |
| MS.gene051423.t1 | AT3G54920 | 65.271 | 406 | 124 | 4 | 20 | 417 | 22 | 418 | 0.0 | 545 |
| MS.gene051423.t1 | AT4G13710 | 62.565 | 382 | 140 | 1 | 34 | 415 | 88 | 466 | 1.10e-180 | 514 |
| MS.gene051423.t1 | AT4G13710 | 62.565 | 382 | 140 | 1 | 34 | 415 | 69 | 447 | 1.69e-180 | 513 |
| MS.gene051423.t1 | AT5G63180 | 59.169 | 409 | 152 | 4 | 9 | 415 | 33 | 428 | 1.75e-176 | 502 |
| MS.gene051423.t1 | AT1G04680 | 56.429 | 420 | 170 | 3 | 8 | 415 | 7 | 425 | 3.11e-172 | 491 |
| MS.gene051423.t1 | AT1G67750 | 62.169 | 378 | 134 | 2 | 34 | 411 | 32 | 400 | 3.67e-172 | 490 |
| MS.gene051423.t1 | AT3G07010 | 60.053 | 378 | 144 | 1 | 34 | 411 | 38 | 408 | 2.98e-169 | 483 |
| MS.gene051423.t1 | AT3G24670 | 61.111 | 378 | 140 | 1 | 34 | 411 | 62 | 432 | 1.75e-168 | 482 |
| MS.gene051423.t1 | AT3G07010 | 63.584 | 346 | 126 | 0 | 66 | 411 | 30 | 375 | 3.46e-168 | 479 |
| MS.gene051423.t1 | AT4G24780 | 60.000 | 390 | 150 | 1 | 26 | 415 | 21 | 404 | 6.07e-167 | 477 |
| MS.gene051423.t1 | AT4G24780 | 60.000 | 390 | 150 | 1 | 26 | 415 | 21 | 404 | 6.07e-167 | 477 |
| MS.gene051423.t1 | AT3G24230 | 58.639 | 382 | 154 | 2 | 34 | 415 | 70 | 447 | 1.17e-166 | 478 |
| MS.gene051423.t1 | AT4G13210 | 60.847 | 378 | 142 | 1 | 34 | 411 | 22 | 393 | 1.90e-164 | 470 |
| MS.gene051423.t1 | AT4G13210 | 60.847 | 378 | 142 | 1 | 34 | 411 | 59 | 430 | 2.46e-164 | 471 |
| MS.gene051423.t1 | AT5G48900 | 57.767 | 412 | 164 | 3 | 3 | 411 | 5 | 409 | 4.52e-161 | 462 |
| MS.gene051423.t1 | AT3G27400 | 53.676 | 408 | 181 | 2 | 8 | 415 | 9 | 408 | 4.26e-158 | 454 |
| MS.gene051423.t1 | AT3G27400 | 54.937 | 395 | 170 | 2 | 21 | 415 | 26 | 412 | 4.79e-158 | 454 |
| MS.gene051423.t1 | AT1G14420 | 50.474 | 422 | 190 | 4 | 10 | 412 | 31 | 452 | 1.42e-152 | 442 |
| MS.gene051423.t1 | AT3G01270 | 55.398 | 352 | 155 | 2 | 62 | 411 | 116 | 467 | 2.49e-143 | 419 |
| MS.gene051423.t1 | AT5G55720 | 50.856 | 409 | 179 | 6 | 10 | 416 | 1 | 389 | 1.59e-142 | 414 |
| MS.gene051423.t1 | AT5G15110 | 53.602 | 347 | 159 | 2 | 67 | 411 | 118 | 464 | 4.34e-141 | 413 |
| MS.gene051423.t1 | AT2G02720 | 48.537 | 410 | 193 | 3 | 21 | 412 | 39 | 448 | 1.11e-140 | 412 |
| MS.gene051423.t1 | AT1G11920 | 59.119 | 318 | 128 | 2 | 63 | 380 | 29 | 344 | 1.05e-137 | 401 |
| MS.gene051423.t1 | AT4G22090 | 54.000 | 350 | 151 | 4 | 71 | 416 | 47 | 390 | 2.20e-130 | 383 |
| MS.gene051423.t1 | AT4G22080 | 53.714 | 350 | 152 | 4 | 71 | 416 | 47 | 390 | 6.19e-130 | 382 |
| MS.gene051423.t1 | AT1G30350 | 50.440 | 341 | 153 | 3 | 71 | 411 | 36 | 360 | 2.26e-117 | 349 |
| MS.gene051423.t1 | AT5G09280 | 47.059 | 238 | 124 | 2 | 104 | 340 | 6 | 242 | 1.18e-68 | 221 |
| MS.gene051423.t1 | AT3G55140 | 36.713 | 286 | 155 | 6 | 90 | 374 | 16 | 276 | 1.54e-40 | 148 |
| MS.gene051423.t1 | AT3G09540 | 36.552 | 290 | 154 | 8 | 88 | 374 | 61 | 323 | 4.89e-38 | 143 |
| MS.gene051423.t1 | AT3G09540 | 36.207 | 290 | 151 | 9 | 88 | 374 | 61 | 319 | 1.33e-36 | 139 |
| MS.gene051423.t1 | AT3G55140 | 32.566 | 304 | 178 | 7 | 125 | 421 | 22 | 305 | 1.38e-34 | 132 |
| MS.gene051423.t1 | AT3G09540 | 37.131 | 237 | 123 | 5 | 88 | 323 | 61 | 272 | 5.86e-33 | 126 |
Find 106 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATAGCATTCAACCATTT+TGG | 0.176765 | 1.1:+47560599 | MS.gene051423:CDS |
| TGACGATTGTTGGCCCAATC+TGG | 0.246902 | 1.1:-47558590 | None:intergenic |
| ACTTCTAAGGCAACAGATTC+AGG | 0.249046 | 1.1:-47557925 | None:intergenic |
| AACATAAGAGTCCAACAAAA+AGG | 0.254751 | 1.1:-47563241 | None:intergenic |
| ACAATGGCTGCTGGTGTTCT+TGG | 0.258365 | 1.1:+47561439 | MS.gene051423:CDS |
| TATCTTAAAGTACCAGGTTT+TGG | 0.259866 | 1.1:-47558716 | None:intergenic |
| TGATGTTCCATGGTTGAAAA+AGG | 0.293620 | 1.1:-47557866 | None:intergenic |
| AGGTTAGCTGATTGTGCAAT+AGG | 0.298252 | 1.1:+47558614 | MS.gene051423:CDS |
| GAACTAATTGTTGACCAAAA+TGG | 0.305223 | 1.1:-47560613 | None:intergenic |
| AATAGCTACAAAACCATTGA+TGG | 0.315393 | 1.1:+47558818 | MS.gene051423:CDS |
| CATTTCCAACAATCGTCTAT+TGG | 0.318679 | 1.1:-47558563 | None:intergenic |
| GTTCTAAATCCATAGTGTTC+TGG | 0.323445 | 1.1:-47560368 | None:intergenic |
| ATTTCCAACAATCGTCTATT+GGG | 0.332927 | 1.1:-47558562 | None:intergenic |
| TTAGGAAAATGCAGGTTGTT+TGG | 0.336248 | 1.1:-47557828 | None:intergenic |
| GCGAATGGACTTCGTGGAAT+TGG | 0.339342 | 1.1:+47561293 | MS.gene051423:CDS |
| AGCTAACCTTTGACGATTGT+TGG | 0.340948 | 1.1:-47558600 | None:intergenic |
| GCTGTTAAAGATCTATGGTT+AGG | 0.343185 | 1.1:-47563271 | None:intergenic |
| ATGCTTAACCTCACTCTTCC+TGG | 0.345866 | 1.1:+47557889 | MS.gene051423:CDS |
| GATTATAGTATGTCATATTC+TGG | 0.346483 | 1.1:+47563155 | MS.gene051423:CDS |
| GTTACTTGCATTCCTGAGTC+TGG | 0.346633 | 1.1:-47560578 | None:intergenic |
| GAAATCCTATCAGCAGCTTT+AGG | 0.349951 | 1.1:-47561409 | None:intergenic |
| TGTGTACCTGTGAACTTCTA+AGG | 0.361301 | 1.1:-47557938 | None:intergenic |
| GCTGATTGTGCAATAGGGTT+TGG | 0.366786 | 1.1:+47558620 | MS.gene051423:CDS |
| CGGTTTAATAGACGTCGTTA+TGG | 0.370008 | 1.1:+47560472 | MS.gene051423:CDS |
| GGAGATGGAATCTCAATATT+CGG | 0.372629 | 1.1:+47560401 | MS.gene051423:CDS |
| AACTTAATCATCATGTTACT+TGG | 0.382043 | 1.1:-47558776 | None:intergenic |
| GGTTTAATAGACGTCGTTAT+GGG | 0.389398 | 1.1:+47560473 | MS.gene051423:CDS |
| GTGACGAAGAGGTTGGATTC+TGG | 0.389452 | 1.1:+47561265 | MS.gene051423:CDS |
| GATGCAAGGTAACCGGTATA+CGG | 0.413903 | 1.1:+47561216 | MS.gene051423:intron |
| AGGAGCAAAGTAGTGAGATT+AGG | 0.428527 | 1.1:-47557846 | None:intergenic |
| CATAACGAGGTTATGTTACT+AGG | 0.428840 | 1.1:+47560536 | MS.gene051423:CDS |
| GGTGCTGATGTTCATATTGT+TGG | 0.431570 | 1.1:+47558845 | MS.gene051423:CDS |
| TTTGTTGATTCAGGTGATAA+GGG | 0.433331 | 1.1:+47561352 | MS.gene051423:CDS |
| CTGTTAAAGATCTATGGTTA+GGG | 0.438693 | 1.1:-47563270 | None:intergenic |
| GGTTAGCTGATTGTGCAATA+GGG | 0.445483 | 1.1:+47558615 | MS.gene051423:CDS |
| GACGATTGTTGGCCCAATCT+GGG | 0.446148 | 1.1:-47558589 | None:intergenic |
| TATTCGGGTCAAAAGACATA+TGG | 0.449746 | 1.1:+47560417 | MS.gene051423:CDS |
| GAGATGGAATCTCAATATTC+GGG | 0.450110 | 1.1:+47560402 | MS.gene051423:CDS |
| TTGGAAATGCGACCCAGATT+GGG | 0.450125 | 1.1:+47558577 | MS.gene051423:CDS |
| AAGGCAACAGATTCAGGGTC+TGG | 0.459566 | 1.1:-47557919 | None:intergenic |
| TGTATGCTATTGGTGGAAGC+GGG | 0.461262 | 1.1:+47560702 | MS.gene051423:CDS |
| GTTGGAAATGCGACCCAGAT+TGG | 0.464792 | 1.1:+47558576 | MS.gene051423:CDS |
| TATCTCTGATGCAAGGTAAC+CGG | 0.469363 | 1.1:+47561209 | MS.gene051423:intron |
| TCTAGTCTTACAATGGCTGC+TGG | 0.469801 | 1.1:+47561430 | MS.gene051423:CDS |
| CTGGTGTTCTTGGTGTTGCT+AGG | 0.475057 | 1.1:+47561449 | MS.gene051423:CDS |
| GAAACCCAATAGACGATTGT+TGG | 0.475977 | 1.1:+47558558 | MS.gene051423:CDS |
| TTGATCCTAAAGCTGCTGAT+AGG | 0.481095 | 1.1:+47561404 | MS.gene051423:CDS |
| CTATAATCACCACCACCGTT+TGG | 0.485490 | 1.1:-47563140 | None:intergenic |
| CAAAATGCCAAAGGAGGAAA+AGG | 0.490161 | 1.1:+47558644 | MS.gene051423:CDS |
| ATGAGCAGGGACAATAATCT+AGG | 0.491954 | 1.1:+47563101 | MS.gene051423:intron |
| TGGGAGATGTATGCTATTGG+TGG | 0.495777 | 1.1:+47560695 | MS.gene051423:CDS |
| TTATACAAAATGAACCACTT+TGG | 0.496510 | 1.1:+47558744 | MS.gene051423:CDS |
| AGAATGCCACGTTGCAGACT+CGG | 0.496617 | 1.1:+47560638 | MS.gene051423:CDS |
| CCTCGTTATGGTGTGAGAAA+TGG | 0.497230 | 1.1:-47560523 | None:intergenic |
| CATCCTCAGGAGCCGTATAC+CGG | 0.501557 | 1.1:-47561228 | None:intergenic |
| TAGTGAGATTAGGAAAATGC+AGG | 0.503825 | 1.1:-47557836 | None:intergenic |
| TGCTTCGCGTCAACATCCTC+AGG | 0.504471 | 1.1:-47561241 | None:intergenic |
| CTAGTAACATAACCTCGTTA+TGG | 0.514245 | 1.1:-47560535 | None:intergenic |
| GAAATCTGAAGGTGATGTTA+TGG | 0.519098 | 1.1:+47561315 | MS.gene051423:CDS |
| CGTTCGAGTCCAGAACACTA+TGG | 0.523323 | 1.1:+47560359 | MS.gene051423:CDS |
| ATCAGCACCACGACCATCAA+TGG | 0.524009 | 1.1:-47558831 | None:intergenic |
| TGGATTCTGGTGACAGCGAA+TGG | 0.532614 | 1.1:+47561278 | MS.gene051423:CDS |
| GTTCATCATTGTCATCCCTC+AGG | 0.533136 | 1.1:+47558923 | MS.gene051423:CDS |
| ATGTATGCTATTGGTGGAAG+CGG | 0.534035 | 1.1:+47560701 | MS.gene051423:CDS |
| CTTCTAAGGCAACAGATTCA+GGG | 0.534724 | 1.1:-47557924 | None:intergenic |
| GATGTTCATATTGTTGGTGG+TGG | 0.536484 | 1.1:+47558851 | MS.gene051423:CDS |
| CTGTTGCCTTAGAAGTTCAC+AGG | 0.539920 | 1.1:+47557932 | MS.gene051423:CDS |
| ATGGTGTGAGAAATGGTTGT+TGG | 0.543596 | 1.1:-47560516 | None:intergenic |
| GTGACAGCGAATGGACTTCG+TGG | 0.543746 | 1.1:+47561287 | MS.gene051423:CDS |
| ACACTCTCACGTTGCAAAGA+CGG | 0.545275 | 1.1:+47560452 | MS.gene051423:CDS |
| GCTGATGTTCATATTGTTGG+TGG | 0.547478 | 1.1:+47558848 | MS.gene051423:CDS |
| AGATGGGAGATGTATGCTAT+TGG | 0.550330 | 1.1:+47560692 | MS.gene051423:CDS |
| GGTTAAGCATTGATGTTCCA+TGG | 0.562902 | 1.1:-47557876 | None:intergenic |
| GATTCAGGTGATAAGGGTGA+AGG | 0.563107 | 1.1:+47561358 | MS.gene051423:CDS |
| TCAGGGTCTGGATGTTGACC+AGG | 0.567446 | 1.1:-47557907 | None:intergenic |
| TACAAAACCATTGATGGTCG+TGG | 0.571754 | 1.1:+47558824 | MS.gene051423:CDS |
| GAAGCAAGTGACGAAGAGGT+TGG | 0.573237 | 1.1:+47561258 | MS.gene051423:CDS |
| ACTGCATATCTTAAAGTACC+AGG | 0.583146 | 1.1:-47558722 | None:intergenic |
| AGAACAGAATCAGACGGAGA+TGG | 0.583522 | 1.1:+47560386 | MS.gene051423:CDS |
| GACCACTACAAACCAGACTC+AGG | 0.600307 | 1.1:+47560566 | MS.gene051423:CDS |
| GAAGGTGATGTTATGGCGAA+TGG | 0.601854 | 1.1:+47561322 | MS.gene051423:CDS |
| TCGTGGAATTGGAAATCTGA+AGG | 0.604215 | 1.1:+47561304 | MS.gene051423:CDS |
| CTTGGAAACACAATCCAAAG+TGG | 0.606839 | 1.1:-47558758 | None:intergenic |
| TTCCTGAGTCTGGTTTGTAG+TGG | 0.607885 | 1.1:-47560568 | None:intergenic |
| ACGCGAAGCAAGTGACGAAG+AGG | 0.613864 | 1.1:+47561254 | MS.gene051423:CDS |
| GTATGCTATTGGTGGAAGCG+GGG | 0.614417 | 1.1:+47560703 | MS.gene051423:CDS |
| TAGGATTTCTAGTCTTACAA+TGG | 0.616043 | 1.1:+47561423 | MS.gene051423:CDS |
| TATGCTATTGGTGGAAGCGG+GGG | 0.619508 | 1.1:+47560704 | MS.gene051423:CDS |
| GGATTTAGAACAGAATCAGA+CGG | 0.624177 | 1.1:+47560380 | MS.gene051423:CDS |
| AATGCCAAAGGAGGAAAAGG+TGG | 0.625369 | 1.1:+47558647 | MS.gene051423:CDS |
| ACAAGAGCACCAAACGGTGG+TGG | 0.630315 | 1.1:+47563131 | MS.gene051423:CDS |
| GGGACAATAATCTAGGAATG+TGG | 0.631048 | 1.1:+47563108 | MS.gene051423:intron |
| ATTGGGCCAACAATCGTCAA+AGG | 0.631186 | 1.1:+47558594 | MS.gene051423:CDS |
| GATGCTGTCAATCCAAAACC+TGG | 0.634213 | 1.1:+47558704 | MS.gene051423:CDS |
| ATGTGGACAAGAGCACCAAA+CGG | 0.637472 | 1.1:+47563125 | MS.gene051423:CDS |
| TAACCGGTATACGGCTCCTG+AGG | 0.641263 | 1.1:+47561225 | MS.gene051423:CDS |
| GGGTTTGGACAAAATGCCAA+AGG | 0.641402 | 1.1:+47558635 | MS.gene051423:CDS |
| CCATTTCTCACACCATAACG+AGG | 0.655644 | 1.1:+47560523 | MS.gene051423:CDS |
| TTTGGACAAAATGCCAAAGG+AGG | 0.659473 | 1.1:+47558638 | MS.gene051423:CDS |
| GATGTTGACCAGGAAGAGTG+AGG | 0.666585 | 1.1:-47557897 | None:intergenic |
| CTGGTTTGTAGTGGTCACTG+TGG | 0.694709 | 1.1:-47560559 | None:intergenic |
| TAAAATCGTTGTTCACCACG+TGG | 0.713863 | 1.1:-47560667 | None:intergenic |
| TGCAACGTGAGAGTGTGCAA+TGG | 0.716046 | 1.1:-47560445 | None:intergenic |
| TGGACAAGAGCACCAAACGG+TGG | 0.739078 | 1.1:+47563128 | MS.gene051423:CDS |
| ATGTATCCGAGTCTGCAACG+TGG | 0.772647 | 1.1:-47560644 | None:intergenic |
| CAGACTCGGATACATCCACG+TGG | 0.798535 | 1.1:+47560652 | MS.gene051423:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAGTTAATTAATTG+TGG | + | chr1.1:47559255-47559274 | MS.gene051423:intron | 10.0% |
| !! | AAAAAAAGTTAATTAATTGT+GGG | + | chr1.1:47559256-47559275 | MS.gene051423:intron | 10.0% |
| !! | AATTCCAAATAATAAATATT+TGG | + | chr1.1:47559853-47559872 | MS.gene051423:intron | 10.0% |
| !! | ATAAAAATAAAGGATAAAAA+TGG | + | chr1.1:47561991-47562010 | MS.gene051423:intron | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr1.1:47562183-47562202 | None:intergenic | 10.0% |
| !!! | AAAAAATTTCTTTTTTTTTG+GGG | + | chr1.1:47558190-47558209 | MS.gene051423:intron | 10.0% |
| !!! | AAAAATACTACTATTTTTTT+AGG | + | chr1.1:47558291-47558310 | MS.gene051423:intron | 10.0% |
| !!! | AAAATACTACTATTTTTTTA+GGG | + | chr1.1:47558292-47558311 | MS.gene051423:intron | 10.0% |
| !!! | AACAATTTCATTTTATTTTT+TGG | + | chr1.1:47558321-47558340 | MS.gene051423:intron | 10.0% |
| !!! | ACAATTTCATTTTATTTTTT+GGG | + | chr1.1:47558322-47558341 | MS.gene051423:intron | 10.0% |
| !!! | CAATTAATTAACTTTTTTTT+AGG | - | chr1.1:47559255-47559274 | None:intergenic | 10.0% |
| !!! | CATATAAAAATTTCATTTTT+TGG | + | chr1.1:47558377-47558396 | MS.gene051423:intron | 10.0% |
| !!! | TAAATGATGTATAATTTTAT+AGG | - | chr1.1:47559884-47559903 | None:intergenic | 10.0% |
| !!! | TAATTTTTAAAATGTCAATT+AGG | + | chr1.1:47561702-47561721 | MS.gene051423:intron | 10.0% |
| !!! | TGAAAAAATTTCATTTTTTA+TGG | + | chr1.1:47558241-47558260 | MS.gene051423:intron | 10.0% |
| !!! | TTTTATTTTGTTTTAGATTT+TGG | + | chr1.1:47562792-47562811 | MS.gene051423:intron | 10.0% |
| !! | AAAATTATTTAGTATACGAT+TGG | + | chr1.1:47558951-47558970 | MS.gene051423:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr1.1:47562505-47562524 | MS.gene051423:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr1.1:47562524-47562505 | None:intergenic | 15.0% |
| !! | ATTAAAATCACATACTTATA+TGG | - | chr1.1:47559408-47559427 | None:intergenic | 15.0% |
| !! | CTTAATGATTATAAAGATAT+GGG | - | chr1.1:47558098-47558117 | None:intergenic | 15.0% |
| !! | TCTTAATGATTATAAAGATA+TGG | - | chr1.1:47558099-47558118 | None:intergenic | 15.0% |
| !! | TTAAAACAAGTTATGTAAAA+GGG | + | chr1.1:47558130-47558149 | MS.gene051423:intron | 15.0% |
| !! | TTATTATACATCAATTAAGT+AGG | + | chr1.1:47559120-47559139 | MS.gene051423:intron | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | - | chr1.1:47562154-47562173 | None:intergenic | 15.0% |
| !!! | AAATAATTTTTTTTACCTGA+GGG | - | chr1.1:47558941-47558960 | None:intergenic | 15.0% |
| !!! | AAATCTTACAAAACAAATTT+TGG | - | chr1.1:47562858-47562877 | None:intergenic | 15.0% |
| !!! | ATAAAAATTTCATTTTTTGG+AGG | + | chr1.1:47558380-47558399 | MS.gene051423:intron | 15.0% |
| !!! | CAATTTCATTTTATTTTTTG+GGG | + | chr1.1:47558323-47558342 | MS.gene051423:intron | 15.0% |
| !!! | GTCATAACAAATTTTTTTTT+GGG | + | chr1.1:47558263-47558282 | MS.gene051423:intron | 15.0% |
| !!! | TAAAAATTTCATTTTTTGGA+GGG | + | chr1.1:47558381-47558400 | MS.gene051423:intron | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | - | chr1.1:47562155-47562174 | None:intergenic | 15.0% |
| !!! | TAAATAATTTTTTTTACCTG+AGG | - | chr1.1:47558942-47558961 | None:intergenic | 15.0% |
| !!! | TTGTTGACTAAAATATAAAA+GGG | + | chr1.1:47559646-47559665 | MS.gene051423:intron | 15.0% |
| !!! | TTTGTTGACTAAAATATAAA+AGG | + | chr1.1:47559645-47559664 | MS.gene051423:intron | 15.0% |
| !!! | TTTTGTAAGATTTTTTTTGA+AGG | + | chr1.1:47562865-47562884 | MS.gene051423:intron | 15.0% |
| !! | AACATACTACAAATTAGAAT+AGG | - | chr1.1:47559342-47559361 | None:intergenic | 20.0% |
| !! | ACAAAAGTAACAAAAGTAAA+AGG | - | chr1.1:47562662-47562681 | None:intergenic | 20.0% |
| !! | AGATATAAGTCACAAAAATA+TGG | + | chr1.1:47562314-47562333 | MS.gene051423:intron | 20.0% |
| !! | ATAGTGCAAATATTCTAAAT+AGG | + | chr1.1:47561149-47561168 | MS.gene051423:intron | 20.0% |
| !! | ATTAAGAAATTAAGTGTGTA+TGG | - | chr1.1:47561660-47561679 | None:intergenic | 20.0% |
| !! | ATTCAATCAACTAGTAATAA+AGG | - | chr1.1:47561516-47561535 | None:intergenic | 20.0% |
| !! | CTTAAAACAAGTTATGTAAA+AGG | + | chr1.1:47558129-47558148 | MS.gene051423:intron | 20.0% |
| !! | GTGTCCAAATATTTATTATT+TGG | - | chr1.1:47559860-47559879 | None:intergenic | 20.0% |
| !! | TAGTCTATCTATTCATTATT+GGG | + | chr1.1:47562018-47562037 | MS.gene051423:intron | 20.0% |
| !! | TTAGTCTATCTATTCATTAT+TGG | + | chr1.1:47562017-47562036 | MS.gene051423:intron | 20.0% |
| !! | TTGATTCAGTAAATAATGAA+GGG | - | chr1.1:47562578-47562597 | None:intergenic | 20.0% |
| !! | TTTGGTACAAATAATATCAA+AGG | + | chr1.1:47562810-47562829 | MS.gene051423:intron | 20.0% |
| !!! | AAACAAATTTTGATTGAGTA+AGG | + | chr1.1:47562444-47562463 | MS.gene051423:intron | 20.0% |
| !!! | AACTTGTTTTAAGTAATGTA+GGG | - | chr1.1:47558122-47558141 | None:intergenic | 20.0% |
| !!! | ATACTTTTTTTTGACAAAAG+AGG | + | chr1.1:47563041-47563060 | MS.gene051423:intron | 20.0% |
| !!! | ATTGATTCAGTAAATAATGA+AGG | - | chr1.1:47562579-47562598 | None:intergenic | 20.0% |
| !!! | GGTCATAACAAATTTTTTTT+TGG | + | chr1.1:47558262-47558281 | MS.gene051423:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAG+AGG | - | chr1.1:47562403-47562422 | None:intergenic | 20.0% |
| !!! | TAACTTGTTTTAAGTAATGT+AGG | - | chr1.1:47558123-47558142 | None:intergenic | 20.0% |
| !!! | TATTGGGTTAATTATGTTTT+TGG | + | chr1.1:47562034-47562053 | MS.gene051423:intron | 20.0% |
| ! | AAAAAGCTAAGAAAGAAACA+GGG | - | chr1.1:47558038-47558057 | None:intergenic | 25.0% |
| ! | AAAGCAACTAAATACATGTT+TGG | - | chr1.1:47559089-47559108 | None:intergenic | 25.0% |
| ! | AACTTAATCATCATGTTACT+TGG | - | chr1.1:47558779-47558798 | None:intergenic | 25.0% |
| ! | AATTACACTTCCTCTAATTT+GGG | - | chr1.1:47559746-47559765 | None:intergenic | 25.0% |
| ! | ACAAAATTTGTAATGCTTGA+AGG | + | chr1.1:47560323-47560342 | MS.gene051423:intron | 25.0% |
| ! | ACTAAAATATAAAAGGGTCT+TGG | + | chr1.1:47559652-47559671 | MS.gene051423:intron | 25.0% |
| ! | AGAAAAATAGAGTCAAAACA+TGG | + | chr1.1:47561119-47561138 | MS.gene051423:intron | 25.0% |
| ! | ATACCTTGACTAAAAATAGT+TGG | - | chr1.1:47560731-47560750 | None:intergenic | 25.0% |
| ! | CACACAGAAAATATTAACTT+TGG | - | chr1.1:47560270-47560289 | None:intergenic | 25.0% |
| ! | CAGAAAATATTAACTTTGGA+TGG | - | chr1.1:47560266-47560285 | None:intergenic | 25.0% |
| ! | CTAAATAGGTCAAGTAATAT+GGG | + | chr1.1:47561163-47561182 | MS.gene051423:intron | 25.0% |
| ! | GAATAATAAATGCTAAGAGA+AGG | - | chr1.1:47560011-47560030 | None:intergenic | 25.0% |
| ! | GATTATAGTATGTCATATTC+TGG | + | chr1.1:47563155-47563174 | MS.gene051423:CDS | 25.0% |
| ! | GTAAATTAGTCCATCTAAAT+TGG | + | chr1.1:47562887-47562906 | MS.gene051423:intron | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | - | chr1.1:47562379-47562398 | None:intergenic | 25.0% |
| ! | TAATTACACTTCCTCTAATT+TGG | - | chr1.1:47559747-47559766 | None:intergenic | 25.0% |
| ! | TCTAAATAGGTCAAGTAATA+TGG | + | chr1.1:47561162-47561181 | MS.gene051423:intron | 25.0% |
| ! | TTATACAAAATGAACCACTT+TGG | + | chr1.1:47558744-47558763 | MS.gene051423:CDS | 25.0% |
| ! | TTTAGCATTAGAGAAATACT+TGG | + | chr1.1:47559822-47559841 | MS.gene051423:intron | 25.0% |
| !! | AAATAAGTTTAGAATTGCGT+TGG | - | chr1.1:47561890-47561909 | None:intergenic | 25.0% |
| !! | ATATGATTTCAAAAGTGTAG+GGG | - | chr1.1:47559585-47559604 | None:intergenic | 25.0% |
| !! | ATTTTCTGTGTGAACAAATA+AGG | + | chr1.1:47560278-47560297 | MS.gene051423:intron | 25.0% |
| !! | GATATGATTTCAAAAGTGTA+GGG | - | chr1.1:47559586-47559605 | None:intergenic | 25.0% |
| !! | TACAAGGTTGTAATTTTGTA+GGG | - | chr1.1:47562061-47562080 | None:intergenic | 25.0% |
| !! | TGATATGATTTCAAAAGTGT+AGG | - | chr1.1:47559587-47559606 | None:intergenic | 25.0% |
| !! | TTACAAGGTTGTAATTTTGT+AGG | - | chr1.1:47562062-47562081 | None:intergenic | 25.0% |
| !! | TTTTAAATACAAACCCACTT+GGG | - | chr1.1:47562985-47563004 | None:intergenic | 25.0% |
| !!! | GAGTACAGAAATTTTTTGTA+GGG | + | chr1.1:47562476-47562495 | MS.gene051423:intron | 25.0% |
| !!! | GTGTAACTTTTAAAAAACCA+CGG | + | chr1.1:47559031-47559050 | MS.gene051423:intron | 25.0% |
| !!! | TGAGTACAGAAATTTTTTGT+AGG | + | chr1.1:47562475-47562494 | MS.gene051423:intron | 25.0% |
| !!! | TTGTCGTTTTATAACTGTAT+GGG | + | chr1.1:47562678-47562697 | MS.gene051423:intron | 25.0% |
| !!! | TTTGTCGTTTTATAACTGTA+TGG | + | chr1.1:47562677-47562696 | MS.gene051423:intron | 25.0% |
| AAAAAGGGTTACAAGAGAAT+GGG | - | chr1.1:47563228-47563247 | None:intergenic | 30.0% | |
| AAAAGCTAAGAAAGAAACAG+GGG | - | chr1.1:47558037-47558056 | None:intergenic | 30.0% | |
| AAATATAAAAGGGTCTTGGA+TGG | + | chr1.1:47559656-47559675 | MS.gene051423:intron | 30.0% | |
| AAATTCCTATTGTTCTTTGC+AGG | + | chr1.1:47558459-47558478 | MS.gene051423:intron | 30.0% | |
| AACATAAGAGTCCAACAAAA+AGG | - | chr1.1:47563244-47563263 | None:intergenic | 30.0% | |
| AAGACTAAACGAAACTTAAG+GGG | + | chr1.1:47559700-47559719 | MS.gene051423:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr1.1:47562520-47562539 | MS.gene051423:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | - | chr1.1:47562539-47562520 | None:intergenic | 30.0% | |
| AATAGCTACAAAACCATTGA+TGG | + | chr1.1:47558818-47558837 | MS.gene051423:CDS | 30.0% | |
| ACAAGACTAAACGAAACTTA+AGG | + | chr1.1:47559698-47559717 | MS.gene051423:intron | 30.0% | |
| ACATAAGAGTCCAACAAAAA+GGG | - | chr1.1:47563243-47563262 | None:intergenic | 30.0% | |
| ACATTGTTGCAAAACAAAAG+AGG | + | chr1.1:47560894-47560913 | MS.gene051423:intron | 30.0% | |
| AGAAAAGAAGGAAAAGCAAA+AGG | - | chr1.1:47561487-47561506 | None:intergenic | 30.0% | |
| AGTAAGAAGAGAGAAAAATG+AGG | - | chr1.1:47558007-47558026 | None:intergenic | 30.0% | |
| ATTTCCAACAATCGTCTATT+GGG | - | chr1.1:47558565-47558584 | None:intergenic | 30.0% | |
| CAAAAAGCTAAGAAAGAAAC+AGG | - | chr1.1:47558039-47558058 | None:intergenic | 30.0% | |
| CAAGACTAAACGAAACTTAA+GGG | + | chr1.1:47559699-47559718 | MS.gene051423:intron | 30.0% | |
| CCAAATGAACACTAAAAACT+TGG | - | chr1.1:47561553-47561572 | None:intergenic | 30.0% | |
| CTACTCAATATTAGTTCAAG+TGG | + | chr1.1:47560139-47560158 | MS.gene051423:intron | 30.0% | |
| GAAAAGAAGGAAAAGCAAAA+GGG | - | chr1.1:47561486-47561505 | None:intergenic | 30.0% | |
| GAACTAATTGTTGACCAAAA+TGG | - | chr1.1:47560616-47560635 | None:intergenic | 30.0% | |
| GATACCATAGAAAACTAACT+TGG | + | chr1.1:47558058-47558077 | MS.gene051423:intron | 30.0% | |
| GCAACAATGTTAGTTATCTT+TGG | - | chr1.1:47560884-47560903 | None:intergenic | 30.0% | |
| GTAAGAAGAGAGAAAAATGA+GGG | - | chr1.1:47558006-47558025 | None:intergenic | 30.0% | |
| TAAAGGATGCTTAGAAAAGA+AGG | - | chr1.1:47561499-47561518 | None:intergenic | 30.0% | |
| TCAACTAGGTCAAGTAATAT+GGG | - | chr1.1:47560950-47560969 | None:intergenic | 30.0% | |
| TCACATACTTATATGGTAGA+AGG | - | chr1.1:47559401-47559420 | None:intergenic | 30.0% | |
| TTATGTAAAAGGGTAGATCT+GGG | + | chr1.1:47558140-47558159 | MS.gene051423:intron | 30.0% | |
| ! | ACAATAGCATTCAACCATTT+TGG | + | chr1.1:47560599-47560618 | MS.gene051423:CDS | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+CGG | + | chr1.1:47562217-47562236 | MS.gene051423:intron | 30.0% |
| ! | CTTTTAAATACAAACCCACT+TGG | - | chr1.1:47562986-47563005 | None:intergenic | 30.0% |
| ! | TTTTCAACATCATGTATGAC+AGG | + | chr1.1:47558536-47558555 | MS.gene051423:CDS | 30.0% |
| !! | ATGTTTTTGTCCCTACAAAA+TGG | - | chr1.1:47562549-47562568 | None:intergenic | 30.0% |
| !! | GAGCTAGATTTTGAAAATCA+AGG | - | chr1.1:47560837-47560856 | None:intergenic | 30.0% |
| !! | TAACTTTTAAAAAACCACGG+TGG | + | chr1.1:47559034-47559053 | MS.gene051423:intron | 30.0% |
| !! | TAGGATTTCTAGTCTTACAA+TGG | + | chr1.1:47561423-47561442 | MS.gene051423:CDS | 30.0% |
| !! | TATCTTAAAGTACCAGGTTT+TGG | - | chr1.1:47558719-47558738 | None:intergenic | 30.0% |
| !! | TTGTAGCTTGTTCAAAATCA+TGG | - | chr1.1:47559010-47559029 | None:intergenic | 30.0% |
| !! | TTTGTTGATTCAGGTGATAA+GGG | + | chr1.1:47561352-47561371 | MS.gene051423:CDS | 30.0% |
| !!! | ATGTCCAAGTTAGTTTTCTA+TGG | - | chr1.1:47558065-47558084 | None:intergenic | 30.0% |
| !!! | CCAAGTTTTTAGTGTTCATT+TGG | + | chr1.1:47561550-47561569 | MS.gene051423:intron | 30.0% |
| !!! | TGTCGTTTTATAACTGTATG+GGG | + | chr1.1:47562679-47562698 | MS.gene051423:intron | 30.0% |
| !!! | TTTTGCGATATTTTTTTCCG+AGG | + | chr1.1:47562352-47562371 | MS.gene051423:intron | 30.0% |
| !!! | TTTTGTTGATTCAGGTGATA+AGG | + | chr1.1:47561351-47561370 | MS.gene051423:CDS | 30.0% |
| AAGAGAGAAAAATGAGGGTT+TGG | - | chr1.1:47558001-47558020 | None:intergenic | 35.0% | |
| ACTTTCCTGCAAAGAACAAT+AGG | - | chr1.1:47558467-47558486 | None:intergenic | 35.0% | |
| AGTATCAGAAGCAATCAAGT+AGG | - | chr1.1:47562634-47562653 | None:intergenic | 35.0% | |
| ATAGGTCAAGTAATATGGGA+CGG | + | chr1.1:47561167-47561186 | MS.gene051423:intron | 35.0% | |
| CAAAAAGGGTTACAAGAGAA+TGG | - | chr1.1:47563229-47563248 | None:intergenic | 35.0% | |
| CATAACGAGGTTATGTTACT+AGG | + | chr1.1:47560536-47560555 | MS.gene051423:CDS | 35.0% | |
| CATTTCCAACAATCGTCTAT+TGG | - | chr1.1:47558566-47558585 | None:intergenic | 35.0% | |
| CTAACTTTATCTCTGATGCA+AGG | + | chr1.1:47561202-47561221 | MS.gene051423:intron | 35.0% | |
| CTAGTAACATAACCTCGTTA+TGG | - | chr1.1:47560538-47560557 | None:intergenic | 35.0% | |
| GAAATCTGAAGGTGATGTTA+TGG | + | chr1.1:47561315-47561334 | MS.gene051423:CDS | 35.0% | |
| GAACGTTATTAAAAGGTCCT+CGG | - | chr1.1:47562372-47562391 | None:intergenic | 35.0% | |
| GAGATGGAATCTCAATATTC+GGG | + | chr1.1:47560402-47560421 | MS.gene051423:CDS | 35.0% | |
| GGAGATGGAATCTCAATATT+CGG | + | chr1.1:47560401-47560420 | MS.gene051423:CDS | 35.0% | |
| GGTTTAATAGACGTCGTTAT+GGG | + | chr1.1:47560473-47560492 | MS.gene051423:CDS | 35.0% | |
| GTCAACTAGGTCAAGTAATA+TGG | - | chr1.1:47560951-47560970 | None:intergenic | 35.0% | |
| GTTATGTAAAAGGGTAGATC+TGG | + | chr1.1:47558139-47558158 | MS.gene051423:intron | 35.0% | |
| TAAATGCTAAGAGAAGGTCT+TGG | - | chr1.1:47560005-47560024 | None:intergenic | 35.0% | |
| TAGTATACGATTGGTATCAC+CGG | + | chr1.1:47558960-47558979 | MS.gene051423:intron | 35.0% | |
| TAGTGAGATTAGGAAAATGC+AGG | - | chr1.1:47557839-47557858 | None:intergenic | 35.0% | |
| TATTCGGGTCAAAAGACATA+TGG | + | chr1.1:47560417-47560436 | MS.gene051423:CDS | 35.0% | |
| TGATGTTCCATGGTTGAAAA+AGG | - | chr1.1:47557869-47557888 | None:intergenic | 35.0% | |
| TTAGGAAAATGCAGGTTGTT+TGG | - | chr1.1:47557831-47557850 | None:intergenic | 35.0% | |
| TTAGTCCATCTAAATTGGCA+CGG | + | chr1.1:47562892-47562911 | MS.gene051423:intron | 35.0% | |
| ! | AAATGTGTTGATGAATGAGC+AGG | + | chr1.1:47563087-47563106 | MS.gene051423:intron | 35.0% |
| ! | AATGTGTTGATGAATGAGCA+GGG | + | chr1.1:47563088-47563107 | MS.gene051423:intron | 35.0% |
| ! | ACTGCATATCTTAAAGTACC+AGG | - | chr1.1:47558725-47558744 | None:intergenic | 35.0% |
| ! | GAACAACGATTTTACGAGAT+GGG | + | chr1.1:47560676-47560695 | MS.gene051423:CDS | 35.0% |
| ! | GGATTTAGAACAGAATCAGA+CGG | + | chr1.1:47560380-47560399 | MS.gene051423:CDS | 35.0% |
| ! | GTTCTAAATCCATAGTGTTC+TGG | - | chr1.1:47560371-47560390 | None:intergenic | 35.0% |
| ! | TCTCTTGTAACCCTTTTTGT+TGG | + | chr1.1:47563230-47563249 | MS.gene051423:CDS | 35.0% |
| ! | TGAACAACGATTTTACGAGA+TGG | + | chr1.1:47560675-47560694 | MS.gene051423:CDS | 35.0% |
| ! | TTGGAACAATGTAGGTTTTG+TGG | - | chr1.1:47557982-47558001 | None:intergenic | 35.0% |
| ! | TTTTTCCGTGCCAATTTAGA+TGG | - | chr1.1:47562900-47562919 | None:intergenic | 35.0% |
| !!! | GGACCAACTATTTTTAGTCA+AGG | + | chr1.1:47560725-47560744 | MS.gene051423:CDS | 35.0% |
| !!! | GGAGCTTTTTTTGTTGATTC+AGG | + | chr1.1:47561343-47561362 | MS.gene051423:CDS | 35.0% |
| ACTTCCTCTAATTTGGGTCA+TGG | - | chr1.1:47559740-47559759 | None:intergenic | 40.0% | |
| AGATGGGAGATGTATGCTAT+TGG | + | chr1.1:47560692-47560711 | MS.gene051423:CDS | 40.0% | |
| AGCTAACCTTTGACGATTGT+TGG | - | chr1.1:47558603-47558622 | None:intergenic | 40.0% | |
| AGGAGCAAAGTAGTGAGATT+AGG | - | chr1.1:47557849-47557868 | None:intergenic | 40.0% | |
| AGTATACGATTGGTATCACC+GGG | + | chr1.1:47558961-47558980 | MS.gene051423:intron | 40.0% | |
| AGTGTGTATGGAACCACATT+AGG | - | chr1.1:47561648-47561667 | None:intergenic | 40.0% | |
| ATGAGCAGGGACAATAATCT+AGG | + | chr1.1:47563101-47563120 | MS.gene051423:intron | 40.0% | |
| ATGGTGTGAGAAATGGTTGT+TGG | - | chr1.1:47560519-47560538 | None:intergenic | 40.0% | |
| ATGTATGCTATTGGTGGAAG+CGG | + | chr1.1:47560701-47560720 | MS.gene051423:CDS | 40.0% | |
| CAAAATGCCAAAGGAGGAAA+AGG | + | chr1.1:47558644-47558663 | MS.gene051423:CDS | 40.0% | |
| CAGATTGTTCACATGTGCAA+TGG | - | chr1.1:47560036-47560055 | None:intergenic | 40.0% | |
| CGGTTTAATAGACGTCGTTA+TGG | + | chr1.1:47560472-47560491 | MS.gene051423:CDS | 40.0% | |
| CTAGGTCAAGTAATATGGGA+CGG | - | chr1.1:47560946-47560965 | None:intergenic | 40.0% | |
| CTTGGAAACACAATCCAAAG+TGG | - | chr1.1:47558761-47558780 | None:intergenic | 40.0% | |
| GAAAAGCTAGCAAGTCTTCT+AGG | - | chr1.1:47562738-47562757 | None:intergenic | 40.0% | |
| GAAACCCAATAGACGATTGT+TGG | + | chr1.1:47558558-47558577 | MS.gene051423:CDS | 40.0% | |
| GAAATCCTATCAGCAGCTTT+AGG | - | chr1.1:47561412-47561431 | None:intergenic | 40.0% | |
| GCTGATGTTCATATTGTTGG+TGG | + | chr1.1:47558848-47558867 | MS.gene051423:CDS | 40.0% | |
| GGGACAATAATCTAGGAATG+TGG | + | chr1.1:47563108-47563127 | MS.gene051423:intron | 40.0% | |
| GTGTGTATGGAACCACATTA+GGG | - | chr1.1:47561647-47561666 | None:intergenic | 40.0% | |
| TAAAATCGTTGTTCACCACG+TGG | - | chr1.1:47560670-47560689 | None:intergenic | 40.0% | |
| TATCTCTGATGCAAGGTAAC+CGG | + | chr1.1:47561209-47561228 | MS.gene051423:intron | 40.0% | |
| TCATGTATGAGCCAGAATCA+CGG | - | chr1.1:47559064-47559083 | None:intergenic | 40.0% | |
| TCGTGGAATTGGAAATCTGA+AGG | + | chr1.1:47561304-47561323 | MS.gene051423:CDS | 40.0% | |
| TCTCTCAAATGTCATTGTCG+CGG | + | chr1.1:47559224-47559243 | MS.gene051423:intron | 40.0% | |
| TGAGAATGTGCTCTTCTTTG+AGG | - | chr1.1:47562935-47562954 | None:intergenic | 40.0% | |
| TGTGTACCTGTGAACTTCTA+AGG | - | chr1.1:47557941-47557960 | None:intergenic | 40.0% | |
| TTGATCCTAAAGCTGCTGAT+AGG | + | chr1.1:47561404-47561423 | MS.gene051423:CDS | 40.0% | |
| TTTGGACAAAATGCCAAAGG+AGG | + | chr1.1:47558638-47558657 | MS.gene051423:CDS | 40.0% | |
| ! | AGGTTAGCTGATTGTGCAAT+AGG | + | chr1.1:47558614-47558633 | MS.gene051423:CDS | 40.0% |
| ! | ATGAGGGTTTGGAACAATGT+AGG | - | chr1.1:47557990-47558009 | None:intergenic | 40.0% |
| ! | GATGTTCATATTGTTGGTGG+TGG | + | chr1.1:47558851-47558870 | MS.gene051423:CDS | 40.0% |
| ! | GATTTTCGTCAACCCTAATG+TGG | + | chr1.1:47561632-47561651 | MS.gene051423:intron | 40.0% |
| ! | GGTTAGCTGATTGTGCAATA+GGG | + | chr1.1:47558615-47558634 | MS.gene051423:CDS | 40.0% |
| ! | TACAAAACCATTGATGGTCG+TGG | + | chr1.1:47558824-47558843 | MS.gene051423:CDS | 40.0% |
| ! | TCAAAGAAGAGCACATTCTC+AGG | + | chr1.1:47562934-47562953 | MS.gene051423:intron | 40.0% |
| !! | ACTTCTAAGGCAACAGATTC+AGG | - | chr1.1:47557928-47557947 | None:intergenic | 40.0% |
| !! | CTTCTAAGGCAACAGATTCA+GGG | - | chr1.1:47557927-47557946 | None:intergenic | 40.0% |
| !! | GGTGCTGATGTTCATATTGT+TGG | + | chr1.1:47558845-47558864 | MS.gene051423:CDS | 40.0% |
| !! | GGTTAAGCATTGATGTTCCA+TGG | - | chr1.1:47557879-47557898 | None:intergenic | 40.0% |
| !! | TACAAGGTCGCCATTTTGTA+GGG | + | chr1.1:47562536-47562555 | MS.gene051423:intron | 40.0% |
| !! | TTACAAGGTCGCCATTTTGT+AGG | + | chr1.1:47562535-47562554 | MS.gene051423:intron | 40.0% |
| !! | TTGGGTTAGTTCAGTGGTAT+TGG | - | chr1.1:47562967-47562986 | None:intergenic | 40.0% |
| !!! | CTTTGCTCCTTTTTCAACCA+TGG | + | chr1.1:47557859-47557878 | MS.gene051423:CDS | 40.0% |
| AAGAAAGAAACAGGGGAGAG+AGG | - | chr1.1:47558030-47558049 | None:intergenic | 45.0% | |
| AATGCCAAAGGAGGAAAAGG+TGG | + | chr1.1:47558647-47558666 | MS.gene051423:CDS | 45.0% | |
| ACACTCTCACGTTGCAAAGA+CGG | + | chr1.1:47560452-47560471 | MS.gene051423:CDS | 45.0% | |
| ACCACTGAACTAACCCAAGT+GGG | + | chr1.1:47562969-47562988 | MS.gene051423:intron | 45.0% | |
| AGAACAGAATCAGACGGAGA+TGG | + | chr1.1:47560386-47560405 | MS.gene051423:CDS | 45.0% | |
| ATGCTTAACCTCACTCTTCC+TGG | + | chr1.1:47557889-47557908 | MS.gene051423:CDS | 45.0% | |
| ATTGGGCCAACAATCGTCAA+AGG | + | chr1.1:47558594-47558613 | MS.gene051423:CDS | 45.0% | |
| CATACGTGACAGAGTCAACT+AGG | - | chr1.1:47560964-47560983 | None:intergenic | 45.0% | |
| CCATTTCTCACACCATAACG+AGG | + | chr1.1:47560523-47560542 | MS.gene051423:CDS | 45.0% | |
| CCTCGTTATGGTGTGAGAAA+TGG | - | chr1.1:47560526-47560545 | None:intergenic | 45.0% | |
| CTATAATCACCACCACCGTT+TGG | - | chr1.1:47563143-47563162 | None:intergenic | 45.0% | |
| CTCTCAAATGTCATTGTCGC+GGG | + | chr1.1:47559225-47559244 | MS.gene051423:intron | 45.0% | |
| CTGTTGCCTTAGAAGTTCAC+AGG | + | chr1.1:47557932-47557951 | MS.gene051423:CDS | 45.0% | |
| GAAGGTGATGTTATGGCGAA+TGG | + | chr1.1:47561322-47561341 | MS.gene051423:CDS | 45.0% | |
| GATGCAAGGTAACCGGTATA+CGG | + | chr1.1:47561216-47561235 | MS.gene051423:intron | 45.0% | |
| GATGCTGTCAATCCAAAACC+TGG | + | chr1.1:47558704-47558723 | MS.gene051423:CDS | 45.0% | |
| GATTCAGGTGATAAGGGTGA+AGG | + | chr1.1:47561358-47561377 | MS.gene051423:CDS | 45.0% | |
| GCTGATTGTGCAATAGGGTT+TGG | + | chr1.1:47558620-47558639 | MS.gene051423:CDS | 45.0% | |
| GGGTTTGGACAAAATGCCAA+AGG | + | chr1.1:47558635-47558654 | MS.gene051423:CDS | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | + | chr1.1:47561171-47561190 | MS.gene051423:intron | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | - | chr1.1:47561190-47561171 | None:intergenic | 45.0% | |
| GTTACTTGCATTCCTGAGTC+TGG | - | chr1.1:47560581-47560600 | None:intergenic | 45.0% | |
| GTTCATCATTGTCATCCCTC+AGG | + | chr1.1:47558923-47558942 | MS.gene051423:CDS | 45.0% | |
| TACCACTGAACTAACCCAAG+TGG | + | chr1.1:47562968-47562987 | MS.gene051423:intron | 45.0% | |
| TCTCAAATGTCATTGTCGCG+GGG | + | chr1.1:47559226-47559245 | MS.gene051423:intron | 45.0% | |
| TGGGAGATGTATGCTATTGG+TGG | + | chr1.1:47560695-47560714 | MS.gene051423:CDS | 45.0% | |
| TGTATGCTATTGGTGGAAGC+GGG | + | chr1.1:47560702-47560721 | MS.gene051423:CDS | 45.0% | |
| TTGGAAATGCGACCCAGATT+GGG | + | chr1.1:47558577-47558596 | MS.gene051423:CDS | 45.0% | |
| ! | GGGTGAAGGTAGTTTTCAGA+AGG | + | chr1.1:47561372-47561391 | MS.gene051423:CDS | 45.0% |
| ! | TTCCTGAGTCTGGTTTGTAG+TGG | - | chr1.1:47560571-47560590 | None:intergenic | 45.0% |
| ! | TTGGGTCATGGCCTCTTTTA+GGG | - | chr1.1:47559728-47559747 | None:intergenic | 45.0% |
| ! | TTTGCCACCTTTTCCTCCTT+TGG | - | chr1.1:47558654-47558673 | None:intergenic | 45.0% |
| ! | TTTGGGTCATGGCCTCTTTT+AGG | - | chr1.1:47559729-47559748 | None:intergenic | 45.0% |
| !! | ATGTGGACAAGAGCACCAAA+CGG | + | chr1.1:47563125-47563144 | MS.gene051423:CDS | 45.0% |
| !! | CGTCGTGATTTTGATACACC+CGG | - | chr1.1:47558982-47559001 | None:intergenic | 45.0% |
| !! | TCTAGTCTTACAATGGCTGC+TGG | + | chr1.1:47561430-47561449 | MS.gene051423:CDS | 45.0% |
| !! | AAAAAAATCAATAAAAATAA+AGG | + | chr1.1:47561981-47562000 | MS.gene051423:intron | 5.0% |
| !!! | AAAAAAATTTCTTTTTTTTT+GGG | + | chr1.1:47558189-47558208 | MS.gene051423:intron | 5.0% |
| !!! | TAAAAAAATTTCTTTTTTTT+TGG | + | chr1.1:47558188-47558207 | MS.gene051423:intron | 5.0% |
| !!! | TATCTTTTATTTTAATAAAA+TGG | + | chr1.1:47561788-47561807 | MS.gene051423:intron | 5.0% |
| AAGGCAACAGATTCAGGGTC+TGG | - | chr1.1:47557922-47557941 | None:intergenic | 50.0% | |
| ACAATGGCTGCTGGTGTTCT+TGG | + | chr1.1:47561439-47561458 | MS.gene051423:CDS | 50.0% | |
| AGAATGCCACGTTGCAGACT+CGG | + | chr1.1:47560638-47560657 | MS.gene051423:CDS | 50.0% | |
| ATCAGCACCACGACCATCAA+TGG | - | chr1.1:47558834-47558853 | None:intergenic | 50.0% | |
| ATGTATCCGAGTCTGCAACG+TGG | - | chr1.1:47560647-47560666 | None:intergenic | 50.0% | |
| CGTTCGAGTCCAGAACACTA+TGG | + | chr1.1:47560359-47560378 | MS.gene051423:CDS | 50.0% | |
| GAAGCAAGTGACGAAGAGGT+TGG | + | chr1.1:47561258-47561277 | MS.gene051423:CDS | 50.0% | |
| GACCACTACAAACCAGACTC+AGG | + | chr1.1:47560566-47560585 | MS.gene051423:CDS | 50.0% | |
| GACGATTGTTGGCCCAATCT+GGG | - | chr1.1:47558592-47558611 | None:intergenic | 50.0% | |
| GACGGAGGGAGTAGTTAGTT+AGG | - | chr1.1:47560928-47560947 | None:intergenic | 50.0% | |
| GAGGCCATGACCCAAATTAG+AGG | + | chr1.1:47559733-47559752 | MS.gene051423:intron | 50.0% | |
| GATGTTGACCAGGAAGAGTG+AGG | - | chr1.1:47557900-47557919 | None:intergenic | 50.0% | |
| GGTCAAGTAATATGGGACGG+AGG | + | chr1.1:47561170-47561189 | MS.gene051423:intron | 50.0% | |
| GGTCAAGTAATATGGGACGG+AGG | - | chr1.1:47561189-47561170 | None:intergenic | 50.0% | |
| GTATGCTATTGGTGGAAGCG+GGG | + | chr1.1:47560703-47560722 | MS.gene051423:CDS | 50.0% | |
| GTGACGAAGAGGTTGGATTC+TGG | + | chr1.1:47561265-47561284 | MS.gene051423:CDS | 50.0% | |
| GTTGGAAATGCGACCCAGAT+TGG | + | chr1.1:47558576-47558595 | MS.gene051423:CDS | 50.0% | |
| TATGCTATTGGTGGAAGCGG+GGG | + | chr1.1:47560704-47560723 | MS.gene051423:CDS | 50.0% | |
| TGACGATTGTTGGCCCAATC+TGG | - | chr1.1:47558593-47558612 | None:intergenic | 50.0% | |
| TGGATTCTGGTGACAGCGAA+TGG | + | chr1.1:47561278-47561297 | MS.gene051423:CDS | 50.0% | |
| ! | CTGGTTTGTAGTGGTCACTG+TGG | - | chr1.1:47560562-47560581 | None:intergenic | 50.0% |
| ! | GCGAATGGACTTCGTGGAAT+TGG | + | chr1.1:47561293-47561312 | MS.gene051423:CDS | 50.0% |
| ! | TGCAACGTGAGAGTGTGCAA+TGG | - | chr1.1:47560448-47560467 | None:intergenic | 50.0% |
| ! | TGGGTCATGGCCTCTTTTAG+GGG | - | chr1.1:47559727-47559746 | None:intergenic | 50.0% |
| !! | ACCCACTTGGGTTAGTTCAG+TGG | - | chr1.1:47562973-47562992 | None:intergenic | 50.0% |
| !! | CTGGTGTTCTTGGTGTTGCT+AGG | + | chr1.1:47561449-47561468 | MS.gene051423:CDS | 50.0% |
| !! | GTGCTCTTCTTTGAGGTCTC+AGG | - | chr1.1:47562928-47562947 | None:intergenic | 50.0% |
| ACGCGAAGCAAGTGACGAAG+AGG | + | chr1.1:47561254-47561273 | MS.gene051423:CDS | 55.0% | |
| CAGACTCGGATACATCCACG+TGG | + | chr1.1:47560652-47560671 | MS.gene051423:CDS | 55.0% | |
| CATCCTCAGGAGCCGTATAC+CGG | - | chr1.1:47561231-47561250 | None:intergenic | 55.0% | |
| CTTAAGGGGCCCCCTAAAAG+AGG | + | chr1.1:47559714-47559733 | MS.gene051423:intron | 55.0% | |
| TAACCGGTATACGGCTCCTG+AGG | + | chr1.1:47561225-47561244 | MS.gene051423:CDS | 55.0% | |
| TCAGGGTCTGGATGTTGACC+AGG | - | chr1.1:47557910-47557929 | None:intergenic | 55.0% | |
| TGCTTCGCGTCAACATCCTC+AGG | - | chr1.1:47561244-47561263 | None:intergenic | 55.0% | |
| ! | GGGTCATGGCCTCTTTTAGG+GGG | - | chr1.1:47559726-47559745 | None:intergenic | 55.0% |
| ! | GTGACAGCGAATGGACTTCG+TGG | + | chr1.1:47561287-47561306 | MS.gene051423:CDS | 55.0% |
| !! | ACAAGAGCACCAAACGGTGG+TGG | + | chr1.1:47563131-47563150 | MS.gene051423:CDS | 55.0% |
| !! | TGGACAAGAGCACCAAACGG+TGG | + | chr1.1:47563128-47563147 | MS.gene051423:CDS | 55.0% |
| ACGGTGGATCGCCGTGATTC+TGG | + | chr1.1:47559050-47559069 | MS.gene051423:intron | 60.0% | |
| AGAATCACGGCGATCCACCG+TGG | - | chr1.1:47559051-47559070 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 47557823 | 47563289 | 47557823 | ID=MS.gene051423 |
| chr1.1 | mRNA | 47557823 | 47563289 | 47557823 | ID=MS.gene051423.t1;Parent=MS.gene051423 |
| chr1.1 | exon | 47557823 | 47557953 | 47557823 | ID=MS.gene051423.t1.exon1;Parent=MS.gene051423.t1 |
| chr1.1 | CDS | 47557823 | 47557953 | 47557823 | ID=cds.MS.gene051423.t1;Parent=MS.gene051423.t1 |
| chr1.1 | exon | 47558481 | 47558944 | 47558481 | ID=MS.gene051423.t1.exon2;Parent=MS.gene051423.t1 |
| chr1.1 | CDS | 47558481 | 47558944 | 47558481 | ID=cds.MS.gene051423.t1;Parent=MS.gene051423.t1 |
| chr1.1 | exon | 47560345 | 47560746 | 47560345 | ID=MS.gene051423.t1.exon3;Parent=MS.gene051423.t1 |
| chr1.1 | CDS | 47560345 | 47560746 | 47560345 | ID=cds.MS.gene051423.t1;Parent=MS.gene051423.t1 |
| chr1.1 | exon | 47561224 | 47561470 | 47561224 | ID=MS.gene051423.t1.exon4;Parent=MS.gene051423.t1 |
| chr1.1 | CDS | 47561224 | 47561470 | 47561224 | ID=cds.MS.gene051423.t1;Parent=MS.gene051423.t1 |
| chr1.1 | exon | 47563109 | 47563289 | 47563109 | ID=MS.gene051423.t1.exon5;Parent=MS.gene051423.t1 |
| chr1.1 | CDS | 47563109 | 47563289 | 47563109 | ID=cds.MS.gene051423.t1;Parent=MS.gene051423.t1 |
| Gene Sequence |
| Protein sequence |
