AlfalfaGEDB | MS.gene95778

M. sativa cultivar XinJiangDaYe / MS.gene95778

KEGG: K07904
GO: GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00071.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95778.t1	XP_013467540.1	99.3	148	1	0	21	168	76	223	2.50E-77	298.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95778.t1	Q9LH50	84.5	148	20	2	21	168	76	220	2.5e-65	249.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95778.t1	I3SB39	99.3	148	1	0	21	168	76	223	1.8e-77	298.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04918	MS.gene95778	0.800922	1.15E-48	-1.69E-46
MS.gene049254	MS.gene95778	0.850424	1.71E-60	-1.69E-46
MS.gene049283	MS.gene95778	0.814531	1.47E-51	-1.69E-46
MS.gene049452	MS.gene95778	0.801909	7.21E-49	-1.69E-46
MS.gene049499	MS.gene95778	0.81796	2.52E-52	-1.69E-46
MS.gene049983	MS.gene95778	0.809114	2.22E-50	-1.69E-46
MS.gene050026	MS.gene95778	0.817604	3.03E-52	-1.69E-46
MS.gene050559	MS.gene95778	0.828855	7.13E-55	-1.69E-46
MS.gene050561	MS.gene95778	0.827494	1.52E-54	-1.69E-46
MS.gene050562	MS.gene95778	0.822366	2.46E-53	-1.69E-46
MS.gene051201	MS.gene95778	0.802014	6.86E-49	-1.69E-46
MS.gene051279	MS.gene95778	0.829926	3.92E-55	-1.69E-46
MS.gene051332	MS.gene95778	0.834308	3.23E-56	-1.69E-46
MS.gene051744	MS.gene95778	0.825202	5.33E-54	-1.69E-46
MS.gene052016	MS.gene95778	0.805941	1.05E-49	-1.69E-46
MS.gene052037	MS.gene95778	0.812051	5.15E-51	-1.69E-46
MS.gene052118	MS.gene95778	0.80824	3.41E-50	-1.69E-46
MS.gene052463	MS.gene95778	0.800947	1.13E-48	-1.69E-46
MS.gene052519	MS.gene95778	0.806197	9.25E-50	-1.69E-46
MS.gene052534	MS.gene95778	0.825117	5.58E-54	-1.69E-46
MS.gene052582	MS.gene95778	0.834488	2.91E-56	-1.69E-46
MS.gene052584	MS.gene95778	0.839353	1.67E-57	-1.69E-46
MS.gene05308	MS.gene95778	0.825703	4.06E-54	-1.69E-46
MS.gene053226	MS.gene95778	0.815484	9.03E-52	-1.69E-46
MS.gene05422	MS.gene95778	0.805061	1.60E-49	-1.69E-46
MS.gene05423	MS.gene95778	0.842348	2.73E-58	-1.69E-46
MS.gene054479	MS.gene95778	0.808761	2.64E-50	-1.69E-46
MS.gene054641	MS.gene95778	0.802331	5.90E-49	-1.69E-46
MS.gene054651	MS.gene95778	0.848301	6.69E-60	-1.69E-46
MS.gene054892	MS.gene95778	0.815324	9.80E-52	-1.69E-46
MS.gene054893	MS.gene95778	0.815374	9.55E-52	-1.69E-46
MS.gene054991	MS.gene95778	0.80756	4.76E-50	-1.69E-46
MS.gene055228	MS.gene95778	0.813759	2.17E-51	-1.69E-46
MS.gene055229	MS.gene95778	0.819517	1.11E-52	-1.69E-46
MS.gene055586	MS.gene95778	0.801974	6.99E-49	-1.69E-46
MS.gene055589	MS.gene95778	0.81017	1.32E-50	-1.69E-46
MS.gene056050	MS.gene95778	0.815203	1.04E-51	-1.69E-46
MS.gene056174	MS.gene95778	0.818164	2.26E-52	-1.69E-46
MS.gene056272	MS.gene95778	0.802617	5.15E-49	-1.69E-46
MS.gene056699	MS.gene95778	0.80069	1.28E-48	-1.69E-46
MS.gene056854	MS.gene95778	0.806328	8.68E-50	-1.69E-46
MS.gene05686	MS.gene95778	0.845958	2.94E-59	-1.69E-46
MS.gene05690	MS.gene95778	0.803125	4.05E-49	-1.69E-46
MS.gene056973	MS.gene95778	0.808967	2.39E-50	-1.69E-46
MS.gene057208	MS.gene95778	0.840725	7.32E-58	-1.69E-46
MS.gene058279	MS.gene95778	0.811868	5.64E-51	-1.69E-46
MS.gene058979	MS.gene95778	0.808909	2.46E-50	-1.69E-46
MS.gene05952	MS.gene95778	0.812503	4.10E-51	-1.69E-46
MS.gene05985	MS.gene95778	-0.818981	1.48E-52	-1.69E-46
MS.gene060257	MS.gene95778	0.800372	1.49E-48	-1.69E-46
MS.gene060258	MS.gene95778	0.810525	1.10E-50	-1.69E-46
MS.gene060365	MS.gene95778	0.802701	4.95E-49	-1.69E-46
MS.gene060373	MS.gene95778	0.802739	4.86E-49	-1.69E-46
MS.gene060935	MS.gene95778	0.801393	9.20E-49	-1.69E-46
MS.gene060937	MS.gene95778	0.807898	4.04E-50	-1.69E-46
MS.gene061188	MS.gene95778	0.813514	2.46E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95778.t1	MTR_1g052475	99.324	148	1	0	21	168	76	223	6.58e-109	310
MS.gene95778.t1	MTR_0262s0050	78.231	147	29	2	21	167	76	219	2.90e-78	232
MS.gene95778.t1	MTR_3g086980	67.347	147	46	2	21	167	77	221	3.04e-67	204
MS.gene95778.t1	MTR_8g089985	63.265	147	53	1	21	167	78	223	3.94e-65	199
MS.gene95778.t1	MTR_2g014990	59.864	147	54	2	21	167	74	215	1.88e-57	179
MS.gene95778.t1	MTR_4g088090	59.184	147	55	2	21	167	74	215	2.88e-57	179
MS.gene95778.t1	MTR_4g079350	59.184	147	55	2	21	167	74	215	9.56e-57	177
MS.gene95778.t1	MTR_4g064897	61.224	147	51	3	21	167	73	213	3.58e-55	173
MS.gene95778.t1	MTR_2g075950	57.143	147	58	3	21	167	74	215	8.70e-55	172
MS.gene95778.t1	MTR_2g005510	57.823	147	58	2	21	167	76	218	1.85e-54	171
MS.gene95778.t1	MTR_3g069510	57.432	148	58	2	21	168	73	215	4.87e-54	170
MS.gene95778.t1	MTR_2g083860	55.782	147	61	2	21	167	74	216	1.20e-53	169
MS.gene95778.t1	MTR_2g090865	55.102	147	60	2	21	167	72	212	9.55e-53	167
MS.gene95778.t1	MTR_8g027220	63.158	133	42	2	21	152	87	213	4.68e-52	166
MS.gene95778.t1	MTR_8g036220	48.667	150	74	2	21	167	77	226	4.40e-49	158
MS.gene95778.t1	MTR_1g078200	48.667	150	72	3	21	167	75	222	5.45e-46	150
MS.gene95778.t1	MTR_7g405790	47.333	150	70	3	21	167	76	219	4.60e-45	147
MS.gene95778.t1	MTR_7g051940	44.898	147	75	1	21	167	74	214	2.05e-40	135
MS.gene95778.t1	MTR_2g027660	48.696	115	59	0	22	136	68	182	1.64e-37	128
MS.gene95778.t1	MTR_6g079550	43.537	147	78	2	21	167	73	214	6.15e-36	124
MS.gene95778.t1	MTR_8g031660	50.962	104	51	0	22	125	68	171	1.94e-35	122
MS.gene95778.t1	MTR_8g107070	49.153	118	60	0	21	138	75	192	1.13e-34	122
MS.gene95778.t1	MTR_6g021790	46.491	114	61	0	22	135	68	181	2.07e-34	120
MS.gene95778.t1	MTR_8g031870	51.579	95	46	0	21	115	67	161	1.63e-32	114
MS.gene95778.t1	MTR_8g031680	45.217	115	63	0	21	135	67	181	2.15e-32	115
MS.gene95778.t1	MTR_7g117910	42.953	149	63	3	21	166	81	210	4.41e-32	114
MS.gene95778.t1	MTR_7g081700	45.133	113	61	1	21	132	69	181	1.61e-28	105
MS.gene95778.t1	MTR_8g031830	46.000	100	54	0	21	120	67	166	2.13e-28	104
MS.gene95778.t1	MTR_4g099470	36.054	147	79	3	21	167	45	176	1.74e-27	101
MS.gene95778.t1	MTR_2g005500	37.838	148	78	2	21	168	70	203	3.06e-27	101
MS.gene95778.t1	MTR_8g006970	36.735	147	79	3	21	167	83	215	1.53e-26	100
MS.gene95778.t1	MTR_8g006970	45.545	101	55	0	21	121	69	169	2.70e-26	98.6
MS.gene95778.t1	MTR_2g102060	38.211	123	73	2	21	141	71	192	4.10e-25	96.3
MS.gene95778.t1	MTR_1g068740	34.437	151	85	4	21	168	76	215	4.76e-25	96.3
MS.gene95778.t1	MTR_1g068730	33.775	151	86	4	21	168	76	215	1.50e-24	95.1
MS.gene95778.t1	MTR_1g115325	33.333	153	84	3	21	168	76	215	4.04e-24	94.0
MS.gene95778.t1	MTR_7g100020	42.157	102	58	1	21	121	76	177	1.56e-23	92.4
MS.gene95778.t1	MTR_3g064390	40.777	103	61	0	21	123	71	173	3.59e-23	91.3
MS.gene95778.t1	MTR_2g096550	41.593	113	62	3	21	129	76	188	6.42e-23	90.9
MS.gene95778.t1	MTR_5g076590	36.667	120	68	1	21	140	71	182	1.60e-22	89.4
MS.gene95778.t1	MTR_1g094220	38.835	103	63	0	21	123	93	195	4.58e-22	88.2
MS.gene95778.t1	MTR_1g094220	39.796	98	59	0	21	118	93	190	1.02e-21	87.4
MS.gene95778.t1	MTR_1g094220	40.426	94	56	0	21	114	93	186	3.19e-21	86.3
MS.gene95778.t1	MTR_4g063160	34.483	145	76	4	29	168	86	216	5.16e-21	85.9
MS.gene95778.t1	MTR_1g094220	40.426	94	56	0	21	114	93	186	5.22e-21	86.3
MS.gene95778.t1	MTR_2g078000	64.706	51	18	0	19	69	44	94	5.80e-20	80.1
MS.gene95778.t1	MTR_8g103550	32.773	119	72	1	21	139	70	180	5.75e-19	80.1
MS.gene95778.t1	MTR_5g013900	36.082	97	62	0	21	117	70	166	3.47e-18	78.2
MS.gene95778.t1	MTR_8g093740	31.544	149	87	5	21	167	40	175	1.44e-17	75.9
MS.gene95778.t1	MTR_8g093740	31.544	149	87	5	21	167	73	208	1.96e-17	76.3
MS.gene95778.t1	MTR_7g103070	31.544	149	88	3	21	167	21	157	2.56e-17	74.7
MS.gene95778.t1	MTR_4g098950	32.990	97	65	0	21	117	70	166	3.58e-17	75.5
MS.gene95778.t1	MTR_3g087160	28.477	151	88	2	21	167	70	204	5.17e-17	75.1
MS.gene95778.t1	MTR_8g090215	27.891	147	95	1	21	167	70	205	8.25e-17	74.7
MS.gene95778.t1	MTR_7g103070	31.544	149	88	3	21	167	77	213	1.08e-16	74.3
MS.gene95778.t1	MTR_3g096350	30.201	149	89	6	21	167	72	207	2.03e-16	73.6
MS.gene95778.t1	MTR_1g029450	31.333	150	87	6	21	167	77	213	3.38e-16	73.2
MS.gene95778.t1	MTR_1g062760	31.544	149	88	4	21	167	74	210	3.69e-15	70.5
MS.gene95778.t1	MTR_4g069850	32.667	150	85	5	1	142	56	197	4.75e-15	70.1
MS.gene95778.t1	MTR_1g068740	44.776	67	36	1	21	86	76	142	6.59e-15	69.3
MS.gene95778.t1	MTR_1g068730	44.444	63	35	0	21	83	76	138	8.34e-15	68.6
MS.gene95778.t1	MTR_2g078560	60.870	46	18	0	22	67	54	99	4.79e-14	68.6
MS.gene95778.t1	MTR_1g090717	30.719	153	82	6	21	167	77	211	9.88e-14	66.6
MS.gene95778.t1	MTR_2g101890	30.405	148	89	4	1	141	58	198	3.22e-13	65.1
MS.gene95778.t1	MTR_2g005500	47.059	68	36	0	54	121	63	130	5.37e-13	63.5
MS.gene95778.t1	MTR_4g012940	29.730	148	90	4	1	141	56	196	7.75e-13	63.9
MS.gene95778.t1	MTR_3g064390	40.909	66	39	0	21	86	71	136	8.41e-13	63.2
MS.gene95778.t1	MTR_8g092020	35.577	104	60	3	21	117	73	176	8.75e-13	63.9
MS.gene95778.t1	MTR_1g097420	35.577	104	60	3	21	117	69	172	5.39e-12	61.6
MS.gene95778.t1	MTR_1g097420	35.577	104	60	3	21	117	96	199	7.54e-12	61.6
MS.gene95778.t1	MTR_1g069245	58.696	46	19	0	21	66	153	198	8.59e-12	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95778.t1	AT3G12160	84.459	148	20	2	21	168	76	220	6.77e-90	261
MS.gene95778.t1	AT5G47960	77.181	149	30	2	21	168	76	221	2.12e-82	243
MS.gene95778.t1	AT5G65270	61.486	148	55	2	21	167	78	224	6.57e-62	191
MS.gene95778.t1	AT4G39990	60.135	148	54	2	21	167	78	221	1.49e-60	187
MS.gene95778.t1	AT2G33870	58.108	148	58	2	21	168	74	217	4.92e-57	178
MS.gene95778.t1	AT5G60860	59.184	147	55	2	21	167	74	215	1.21e-56	177
MS.gene95778.t1	AT1G28550	59.184	147	56	2	21	167	74	216	2.10e-56	176
MS.gene95778.t1	AT4G18430	57.143	147	58	2	21	167	74	215	3.08e-56	176
MS.gene95778.t1	AT1G16920	59.184	147	54	3	21	167	74	214	3.46e-55	173
MS.gene95778.t1	AT3G15060	57.823	147	57	1	21	167	74	215	1.04e-54	172
MS.gene95778.t1	AT1G06400	55.102	147	60	1	21	167	74	214	2.74e-54	171
MS.gene95778.t1	AT1G07410	57.823	147	55	2	21	167	73	212	7.51e-54	170
MS.gene95778.t1	AT4G18800	59.184	147	52	3	21	167	74	212	8.94e-54	170
MS.gene95778.t1	AT5G45750	56.463	147	58	3	21	167	74	214	6.32e-53	167
MS.gene95778.t1	AT1G09630	55.405	148	61	2	21	168	73	215	3.88e-52	166
MS.gene95778.t1	AT5G59150	58.553	152	49	4	21	167	22	164	1.67e-50	160
MS.gene95778.t1	AT3G46830	56.579	152	52	2	21	167	73	215	3.66e-50	160
MS.gene95778.t1	AT3G46830	56.579	152	52	2	21	167	73	215	3.66e-50	160
MS.gene95778.t1	AT5G59150	57.237	152	51	3	21	167	73	215	8.46e-50	160
MS.gene95778.t1	AT5G47520	48.993	149	70	3	21	167	75	219	2.64e-49	159
MS.gene95778.t1	AT1G01200	58.519	135	48	3	21	152	89	218	7.73e-47	153
MS.gene95778.t1	AT1G05810	47.651	149	70	2	21	167	73	215	3.05e-45	148
MS.gene95778.t1	AT1G05810	47.651	149	70	2	21	167	119	261	8.29e-45	148
MS.gene95778.t1	AT2G43130	57.522	113	48	0	21	133	73	185	3.49e-44	145
MS.gene95778.t1	AT2G31680	55.752	113	50	0	21	133	73	185	6.83e-44	145
MS.gene95778.t1	AT3G07410	45.638	149	73	3	21	167	73	215	2.21e-40	135
MS.gene95778.t1	AT4G17160	45.270	148	70	3	22	168	68	205	7.05e-39	131
MS.gene95778.t1	AT4G17170	44.595	148	77	3	22	168	68	211	8.13e-39	131
MS.gene95778.t1	AT4G35860	42.667	150	77	3	22	168	22	165	2.98e-38	129
MS.gene95778.t1	AT4G35860	42.667	150	77	3	22	168	68	211	2.57e-37	127
MS.gene95778.t1	AT1G18200	42.222	135	74	1	21	151	74	208	1.14e-35	124
MS.gene95778.t1	AT1G73640	41.727	139	73	2	21	151	74	212	2.17e-34	120
MS.gene95778.t1	AT5G46025	49.057	106	53	1	18	122	2	107	9.86e-31	108
MS.gene95778.t1	AT3G11730	41.216	148	75	3	21	168	69	204	2.12e-29	107
MS.gene95778.t1	AT4G17530	39.456	147	74	4	21	167	69	200	4.30e-28	103
MS.gene95778.t1	AT1G02130	36.054	147	80	2	21	167	69	201	9.34e-28	103
MS.gene95778.t1	AT3G09900	37.584	149	82	4	21	167	76	215	3.13e-27	102
MS.gene95778.t1	AT5G03520	37.255	153	77	5	21	168	66	204	8.37e-27	100
MS.gene95778.t1	AT5G03520	37.500	152	76	5	21	167	76	213	1.02e-26	100
MS.gene95778.t1	AT4G19640	43.269	104	59	0	21	124	71	174	5.44e-26	98.6
MS.gene95778.t1	AT5G47200	38.095	147	76	4	21	167	69	200	6.56e-26	98.2
MS.gene95778.t1	AT5G45130	41.346	104	61	0	21	124	71	174	4.39e-25	96.3
MS.gene95778.t1	AT5G45130	41.346	104	61	0	21	124	79	182	1.03e-24	95.5
MS.gene95778.t1	AT3G46060	35.762	151	83	4	21	168	76	215	1.29e-24	95.5
MS.gene95778.t1	AT3G46060	35.762	151	83	4	21	168	76	215	1.29e-24	95.5
MS.gene95778.t1	AT3G46060	35.762	151	83	4	21	168	76	215	1.29e-24	95.5
MS.gene95778.t1	AT3G54840	42.718	103	59	0	21	123	61	163	1.83e-24	93.6
MS.gene95778.t1	AT3G54840	42.718	103	59	0	21	123	95	197	2.38e-24	94.4
MS.gene95778.t1	AT3G54840	44.681	94	52	0	21	114	95	188	5.01e-24	93.2
MS.gene95778.t1	AT5G59840	36.184	152	81	5	21	168	76	215	5.89e-24	93.6
MS.gene95778.t1	AT3G53610	32.258	155	83	3	21	168	76	215	4.26e-23	91.3
MS.gene95778.t1	AT3G53610	32.258	155	83	3	21	168	76	215	4.26e-23	91.3
MS.gene95778.t1	AT3G53610	32.258	155	83	3	21	168	76	215	4.26e-23	91.3
MS.gene95778.t1	AT4G08190	59.375	64	23	1	51	114	67	127	6.44e-19	78.2
MS.gene95778.t1	AT2G44610	29.054	148	95	2	21	168	70	207	4.16e-18	78.2
MS.gene95778.t1	AT1G43890	33.594	128	78	4	21	146	73	195	1.19e-17	77.0
MS.gene95778.t1	AT1G43890	33.594	128	78	4	21	146	73	195	1.19e-17	77.0
MS.gene95778.t1	AT1G43890	33.594	128	78	4	21	146	73	195	1.19e-17	77.0
MS.gene95778.t1	AT5G64990	30.000	120	84	0	2	121	56	175	3.91e-17	75.5
MS.gene95778.t1	AT5G10260	27.891	147	96	2	21	167	70	206	8.55e-17	74.7
MS.gene95778.t1	AT5G64990	32.673	101	68	0	21	121	68	168	1.86e-16	73.6
MS.gene95778.t1	AT5G03530	37.037	108	66	2	21	126	73	180	3.66e-16	73.2
MS.gene95778.t1	AT5G03530	37.037	108	66	2	21	126	73	180	3.66e-16	73.2
MS.gene95778.t1	AT2G22290	27.211	147	96	1	21	167	70	205	5.91e-16	72.4
MS.gene95778.t1	AT4G39890	32.653	98	65	1	21	117	70	167	8.02e-16	72.0
MS.gene95778.t1	AT3G09910	34.259	108	69	2	21	126	73	180	3.38e-14	67.8
MS.gene95778.t1	AT3G09910	34.259	108	69	2	21	126	73	180	3.38e-14	67.8
MS.gene95778.t1	AT3G09910	34.259	108	69	2	21	126	73	180	3.38e-14	67.8
MS.gene95778.t1	AT4G19640	31.000	100	68	1	21	120	71	169	3.49e-14	67.4
MS.gene95778.t1	AT3G09910	36.458	96	59	2	21	114	73	168	7.16e-14	66.6
MS.gene95778.t1	AT3G09910	36.458	96	59	2	21	114	73	168	7.16e-14	66.6
MS.gene95778.t1	AT1G49300	34.127	126	76	3	21	139	69	194	1.28e-13	66.2
MS.gene95778.t1	AT1G49300	34.127	126	76	3	21	139	69	194	1.28e-13	66.2
MS.gene95778.t1	AT3G18820	32.653	147	83	5	1	139	56	194	2.21e-13	65.5
MS.gene95778.t1	AT4G19640	39.394	66	40	0	21	86	71	136	3.73e-13	63.9
MS.gene95778.t1	AT1G52280	32.031	128	80	3	21	141	69	196	8.42e-13	63.9
MS.gene95778.t1	AT4G09720	35.577	104	60	3	21	117	35	138	1.39e-12	62.8
MS.gene95778.t1	AT4G09720	35.577	104	60	3	21	117	35	138	1.39e-12	62.8
MS.gene95778.t1	AT4G09720	35.577	104	60	3	21	117	35	138	1.39e-12	62.8
MS.gene95778.t1	AT4G09720	35.577	104	60	3	21	117	69	172	3.17e-12	62.4
MS.gene95778.t1	AT4G09720	33.945	109	60	3	21	117	69	177	2.61e-11	60.1

Find 38 sgRNAs with CRISPR-Local

Find 41 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGAGAGAACCTATTCTTTA+TGG	0.130117	1.1:+39100910	MS.gene95778:CDS
GCAGATCCTGGTGGTGGTTC+AGG	0.187374	1.1:+39101037	MS.gene95778:CDS
ATTGGCAACAAGTGTGATTT+AGG	0.231958	1.1:+39100842	MS.gene95778:CDS
GAATGTTTGAGACTTCTATT+TGG	0.284305	1.1:+39100630	None:intergenic
AATATTGTCATAATGCTAAT+TGG	0.297275	1.1:+39100824	MS.gene95778:CDS
CAGATCCTGGTGGTGGTTCA+GGG	0.385083	1.1:+39101038	MS.gene95778:CDS
TCACATGGCAAGGTGGTTAG+AGG	0.437761	1.1:+39100778	MS.gene95778:CDS
AAAGCACTCGCATCTTGGTT+AGG	0.445772	1.1:-39101088	None:intergenic
ATCTCTTCTCTCATTCTCTC+AGG	0.449522	1.1:+39100672	MS.gene95778:CDS
TTTCAAAAGCACTCGCATCT+TGG	0.457557	1.1:-39101093	None:intergenic
ACCAGGATCTGCCTCATCAT+TGG	0.458276	1.1:-39101026	None:intergenic
CTGATGTCTCCATAAAGAAT+AGG	0.460765	1.1:-39100919	None:intergenic
GAGACTTCTATTTGGTACTC+TGG	0.475426	1.1:+39100638	MS.gene95778:CDS
TGGTGGTTCAGGGCTTCTGA+AGG	0.476345	1.1:+39101048	MS.gene95778:CDS
AAAGGCGGTTTCGACATTAG+TGG	0.498739	1.1:-39100951	None:intergenic
CAGGGCTTCTGAAGGGAACC+AGG	0.503780	1.1:+39101056	MS.gene95778:CDS
AGTACCTACTGAAGATGCTC+AGG	0.512755	1.1:+39100877	MS.gene95778:CDS
TTCTGTTAGAATAGTCAGAA+AGG	0.528911	1.1:-39100969	None:intergenic
GGTGGTTCAGGGCTTCTGAA+GGG	0.541689	1.1:+39101049	MS.gene95778:CDS
TTGGTTAGGAACAATGATCC+TGG	0.542886	1.1:-39101074	None:intergenic
GCGTATTACCGTGGAGCTGT+TGG	0.546431	1.1:+39100713	MS.gene95778:CDS
GCCAATGATGAGGCAGATCC+TGG	0.550258	1.1:+39101025	MS.gene95778:CDS
AGAAGCCCTGAACCACCACC+AGG	0.558428	1.1:-39101043	None:intergenic
GTGTGATTTAGGAACTCTAA+AGG	0.567777	1.1:+39100853	MS.gene95778:CDS
GAAAAGAAGGGTGGTTGCTG+CGG	0.586510	1.1:+39101112	MS.gene95778:CDS
GCGTCAATCATTTGATCACA+TGG	0.593625	1.1:+39100763	MS.gene95778:CDS
AATCATTTGATCACATGGCA+AGG	0.614175	1.1:+39100768	MS.gene95778:CDS
AACACTTACTGCCAATGATG+AGG	0.617734	1.1:+39101015	MS.gene95778:CDS
AAGGTGGTTAGAGGAACTGA+GGG	0.625451	1.1:+39100787	MS.gene95778:CDS
GATGAGGCAGATCCTGGTGG+TGG	0.641867	1.1:+39101031	MS.gene95778:CDS
ACATCGCTCCAACAGCTCCA+CGG	0.650042	1.1:-39100721	None:intergenic
AACTCCTGAGCATCTTCAGT+AGG	0.655334	1.1:-39100881	None:intergenic
GTAACTAGTGCGTATTACCG+TGG	0.661026	1.1:+39100704	MS.gene95778:CDS
TGTTAGAATAGTCAGAAAGG+CGG	0.662740	1.1:-39100966	None:intergenic
CAAGGTGGTTAGAGGAACTG+AGG	0.663225	1.1:+39100786	MS.gene95778:CDS
CATTTGATCACATGGCAAGG+TGG	0.669974	1.1:+39100771	MS.gene95778:CDS
AATGATGAGGCAGATCCTGG+TGG	0.756314	1.1:+39101028	MS.gene95778:CDS
AGGTGGTTAGAGGAACTGAG+GGG	0.772596	1.1:+39100788	MS.gene95778:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATTGTCATAATGCTAAT+TGG	+	chr1.1:39100824-39100843	MS.gene95778:CDS	20.0%
	AAGAGAGAACCTATTCTTTA+TGG	+	chr1.1:39100910-39100929	MS.gene95778:CDS	30.0%
	TTCTGTTAGAATAGTCAGAA+AGG	-	chr1.1:39100972-39100991	None:intergenic	30.0%
!!!	GTGTTTTTTTGCTGATAAGT+CGG	-	chr1.1:39101000-39101019	None:intergenic	30.0%
	AATCATTTGATCACATGGCA+AGG	+	chr1.1:39100768-39100787	MS.gene95778:CDS	35.0%
	ATTGGCAACAAGTGTGATTT+AGG	+	chr1.1:39100842-39100861	MS.gene95778:CDS	35.0%
	CTGATGTCTCCATAAAGAAT+AGG	-	chr1.1:39100922-39100941	None:intergenic	35.0%
	GTGTGATTTAGGAACTCTAA+AGG	+	chr1.1:39100853-39100872	MS.gene95778:CDS	35.0%
	TGTTAGAATAGTCAGAAAGG+CGG	-	chr1.1:39100969-39100988	None:intergenic	35.0%
	AACACTTACTGCCAATGATG+AGG	+	chr1.1:39101015-39101034	MS.gene95778:CDS	40.0%
	ATCTCTTCTCTCATTCTCTC+AGG	+	chr1.1:39100672-39100691	MS.gene95778:CDS	40.0%
	GAGACTTCTATTTGGTACTC+TGG	+	chr1.1:39100638-39100657	MS.gene95778:CDS	40.0%
	GCGTCAATCATTTGATCACA+TGG	+	chr1.1:39100763-39100782	MS.gene95778:CDS	40.0%
	TTGGTTAGGAACAATGATCC+TGG	-	chr1.1:39101077-39101096	None:intergenic	40.0%
!!	AGTGCTTTTGAAAAGAAGGG+TGG	+	chr1.1:39101103-39101122	MS.gene95778:CDS	40.0%
!!	GCGAGTGCTTTTGAAAAGAA+GGG	+	chr1.1:39101100-39101119	MS.gene95778:CDS	40.0%
!!	TGCGAGTGCTTTTGAAAAGA+AGG	+	chr1.1:39101099-39101118	MS.gene95778:CDS	40.0%
!!	TTTCAAAAGCACTCGCATCT+TGG	-	chr1.1:39101096-39101115	None:intergenic	40.0%
	AAAGGCGGTTTCGACATTAG+TGG	-	chr1.1:39100954-39100973	None:intergenic	45.0%
	AACTCCTGAGCATCTTCAGT+AGG	-	chr1.1:39100884-39100903	None:intergenic	45.0%
	AAGGTGGTTAGAGGAACTGA+GGG	+	chr1.1:39100787-39100806	MS.gene95778:CDS	45.0%
	AGTACCTACTGAAGATGCTC+AGG	+	chr1.1:39100877-39100896	MS.gene95778:CDS	45.0%
	CATTTGATCACATGGCAAGG+TGG	+	chr1.1:39100771-39100790	MS.gene95778:CDS	45.0%
	GTAACTAGTGCGTATTACCG+TGG	+	chr1.1:39100704-39100723	MS.gene95778:CDS	45.0%
!	AAAGCACTCGCATCTTGGTT+AGG	-	chr1.1:39101091-39101110	None:intergenic	45.0%
	AATGATGAGGCAGATCCTGG+TGG	+	chr1.1:39101028-39101047	MS.gene95778:CDS	50.0%
	ACCAGGATCTGCCTCATCAT+TGG	-	chr1.1:39101029-39101048	None:intergenic	50.0%
	AGGTGGTTAGAGGAACTGAG+GGG	+	chr1.1:39100788-39100807	MS.gene95778:CDS	50.0%
	CAAGGTGGTTAGAGGAACTG+AGG	+	chr1.1:39100786-39100805	MS.gene95778:CDS	50.0%
	GAAAAGAAGGGTGGTTGCTG+CGG	+	chr1.1:39101112-39101131	MS.gene95778:CDS	50.0%
	TCACATGGCAAGGTGGTTAG+AGG	+	chr1.1:39100778-39100797	MS.gene95778:CDS	50.0%
	ACATCGCTCCAACAGCTCCA+CGG	-	chr1.1:39100724-39100743	None:intergenic	55.0%
	GCCAATGATGAGGCAGATCC+TGG	+	chr1.1:39101025-39101044	MS.gene95778:CDS	55.0%
	GCGTATTACCGTGGAGCTGT+TGG	+	chr1.1:39100713-39100732	MS.gene95778:CDS	55.0%
	GGTGGTTCAGGGCTTCTGAA+GGG	+	chr1.1:39101049-39101068	MS.gene95778:CDS	55.0%
	TGGTGGTTCAGGGCTTCTGA+AGG	+	chr1.1:39101048-39101067	MS.gene95778:CDS	55.0%
!!	CAGATCCTGGTGGTGGTTCA+GGG	+	chr1.1:39101038-39101057	MS.gene95778:CDS	55.0%
	AGAAGCCCTGAACCACCACC+AGG	-	chr1.1:39101046-39101065	None:intergenic	60.0%
	GATGAGGCAGATCCTGGTGG+TGG	+	chr1.1:39101031-39101050	MS.gene95778:CDS	60.0%
!	CAGGGCTTCTGAAGGGAACC+AGG	+	chr1.1:39101056-39101075	MS.gene95778:CDS	60.0%
!!	GCAGATCCTGGTGGTGGTTC+AGG	+	chr1.1:39101037-39101056	MS.gene95778:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	39100632	39101138	39100632	ID=MS.gene95778
chr1.1	mRNA	39100632	39101138	39100632	ID=MS.gene95778.t1;Parent=MS.gene95778
chr1.1	exon	39100632	39101138	39100632	ID=MS.gene95778.t1.exon1;Parent=MS.gene95778.t1
chr1.1	CDS	39100632	39101138	39100632	ID=cds.MS.gene95778.t1;Parent=MS.gene95778.t1

Gene Sequence

>MS.gene95778

ATGTTTGAGACTTCTATTTGGTACTCTGGATCTGAATGCTATCTCTTCTCTCATTCTCTCAGGTACAGAGCAGTAACTAGTGCGTATTACCGTGGAGCTGTTGGAGCGATGTTAGTTTACGACATGACTAAGCGTCAATCATTTGATCACATGGCAAGGTGGTTAGAGGAACTGAGGGGTCATGCAGACACAAATATTGTCATAATGCTAATTGGCAACAAGTGTGATTTAGGAACTCTAAAGGCAGTACCTACTGAAGATGCTCAGGAGTTTGCACAAAGAGAGAACCTATTCTTTATGGAGACATCAGCACTAGAGTCCACTAATGTCGAAACCGCCTTTCTGACTATTCTAACAGAAATTTACCGACTTATCAGCAAAAAAACACTTACTGCCAATGATGAGGCAGATCCTGGTGGTGGTTCAGGGCTTCTGAAGGGAACCAGGATCATTGTTCCTAACCAAGATGCGAGTGCTTTTGAAAAGAAGGGTGGTTGCTGCGGATAA

Protein sequence

>MS.gene95778.t1

MFETSIWYSGSECYLFSHSLRYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKCDLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTANDEADPGGGSGLLKGTRIIVPNQDASAFEKKGGCCG