Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96338.t1 | XP_003610073.1 | 96.9 | 291 | 9 | 0 | 1 | 291 | 1 | 291 | 1.90E-149 | 538.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96338.t1 | Q9LVD0 | 70.4 | 291 | 84 | 1 | 1 | 291 | 1 | 289 | 2.0e-107 | 390.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96338.t1 | G7JUC5 | 96.9 | 291 | 9 | 0 | 1 | 291 | 1 | 291 | 1.4e-149 | 538.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049342 | MS.gene96338 | 0.819771 | 9.75E-53 | -1.69E-46 |
| MS.gene049441 | MS.gene96338 | 0.802205 | 6.26E-49 | -1.69E-46 |
| MS.gene049473 | MS.gene96338 | 0.83539 | 1.73E-56 | -1.69E-46 |
| MS.gene049580 | MS.gene96338 | 0.830276 | 3.22E-55 | -1.69E-46 |
| MS.gene049824 | MS.gene96338 | 0.875944 | 2.07E-68 | -1.69E-46 |
| MS.gene049825 | MS.gene96338 | 0.898633 | 4.38E-77 | -1.69E-46 |
| MS.gene049863 | MS.gene96338 | 0.802333 | 5.90E-49 | -1.69E-46 |
| MS.gene049873 | MS.gene96338 | 0.884615 | 1.65E-71 | -1.69E-46 |
| MS.gene050277 | MS.gene96338 | 0.830255 | 3.26E-55 | -1.69E-46 |
| MS.gene050303 | MS.gene96338 | 0.829849 | 4.09E-55 | -1.69E-46 |
| MS.gene050427 | MS.gene96338 | 0.853692 | 2.02E-61 | -1.69E-46 |
| MS.gene050916 | MS.gene96338 | 0.807772 | 4.29E-50 | -1.69E-46 |
| MS.gene051330 | MS.gene96338 | 0.811249 | 7.69E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene96338 | 0.817749 | 2.81E-52 | -1.69E-46 |
| MS.gene051791 | MS.gene96338 | 0.813182 | 2.91E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene96338 | 0.80693 | 6.48E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene96338 | 0.843053 | 1.77E-58 | -1.69E-46 |
| MS.gene053122 | MS.gene96338 | 0.840645 | 7.68E-58 | -1.69E-46 |
| MS.gene053195 | MS.gene96338 | 0.802028 | 6.81E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene96338 | 0.819553 | 1.09E-52 | -1.69E-46 |
| MS.gene053294 | MS.gene96338 | 0.853839 | 1.83E-61 | -1.69E-46 |
| MS.gene053401 | MS.gene96338 | 0.867209 | 1.62E-65 | -1.69E-46 |
| MS.gene05365 | MS.gene96338 | 0.808861 | 2.52E-50 | -1.69E-46 |
| MS.gene053995 | MS.gene96338 | 0.83897 | 2.09E-57 | -1.69E-46 |
| MS.gene055374 | MS.gene96338 | 0.821618 | 3.67E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene96338 | 0.836569 | 8.67E-57 | -1.69E-46 |
| MS.gene055555 | MS.gene96338 | 0.889753 | 1.83E-73 | -1.69E-46 |
| MS.gene055580 | MS.gene96338 | -0.80481 | 1.81E-49 | -1.69E-46 |
| MS.gene055808 | MS.gene96338 | 0.881493 | 2.29E-70 | -1.69E-46 |
| MS.gene056075 | MS.gene96338 | 0.835874 | 1.30E-56 | -1.69E-46 |
| MS.gene056091 | MS.gene96338 | 0.889085 | 3.32E-73 | -1.69E-46 |
| MS.gene056403 | MS.gene96338 | 0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene96338 | 0.849902 | 2.40E-60 | -1.69E-46 |
| MS.gene05689 | MS.gene96338 | 0.826604 | 2.48E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene96338 | 0.800107 | 1.68E-48 | -1.69E-46 |
| MS.gene057102 | MS.gene96338 | 0.812997 | 3.20E-51 | -1.69E-46 |
| MS.gene057555 | MS.gene96338 | 0.801407 | 9.14E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene96338 | 0.874407 | 6.92E-68 | -1.69E-46 |
| MS.gene05953 | MS.gene96338 | 0.841843 | 3.72E-58 | -1.69E-46 |
| MS.gene05954 | MS.gene96338 | 0.855042 | 8.23E-62 | -1.69E-46 |
| MS.gene05985 | MS.gene96338 | -0.802453 | 5.57E-49 | -1.69E-46 |
| MS.gene059935 | MS.gene96338 | 0.87226 | 3.64E-67 | -1.69E-46 |
| MS.gene06001 | MS.gene96338 | 0.853544 | 2.23E-61 | -1.69E-46 |
| MS.gene060365 | MS.gene96338 | 0.807648 | 4.56E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene96338 | 0.853881 | 1.78E-61 | -1.69E-46 |
| MS.gene060586 | MS.gene96338 | 0.805161 | 1.53E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene96338 | 0.821128 | 4.76E-53 | -1.69E-46 |
| MS.gene060830 | MS.gene96338 | 0.859964 | 2.87E-63 | -1.69E-46 |
| MS.gene060917 | MS.gene96338 | 0.814875 | 1.23E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96338.t1 | MTR_4g127640 | 98.282 | 291 | 5 | 0 | 1 | 291 | 1 | 291 | 0.0 | 585 |
| MS.gene96338.t1 | MTR_4g127640 | 95.189 | 291 | 5 | 1 | 1 | 291 | 1 | 282 | 0.0 | 559 |
| MS.gene96338.t1 | MTR_4g127640 | 96.624 | 237 | 8 | 0 | 55 | 291 | 64 | 300 | 5.53e-170 | 473 |
| MS.gene96338.t1 | MTR_4g007420 | 71.478 | 291 | 76 | 3 | 1 | 291 | 1 | 284 | 3.05e-149 | 419 |
| MS.gene96338.t1 | MTR_4g007390 | 75.410 | 61 | 15 | 0 | 1 | 61 | 1 | 61 | 7.19e-25 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96338.t1 | AT5G57280 | 73.540 | 291 | 75 | 2 | 1 | 291 | 1 | 289 | 5.55e-159 | 444 |
Find 71 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCTTTGGTTTCAGGGTTT+GGG | 0.166055 | 8.4:+6835579 | MS.gene96338:intron |
| ACCTATGTCAAGGAGTAATT+TGG | 0.173913 | 8.4:-6834852 | None:intergenic |
| ATTCTTTCTCTGCTTCTTAA+AGG | 0.231198 | 8.4:-6838057 | None:intergenic |
| TTCCCGTATTATCGATATTC+AGG | 0.260528 | 8.4:+6834693 | MS.gene96338:CDS |
| CTTCGTCCTGGAGTTATTGA+TGG | 0.312897 | 8.4:+6835603 | MS.gene96338:CDS |
| AGAAAAGAGTTTCTTGTTCT+CGG | 0.339903 | 8.4:+6837433 | MS.gene96338:CDS |
| TACATCTTTATACAGATGTT+TGG | 0.363170 | 8.4:+6836153 | MS.gene96338:CDS |
| TTCTTTCTCTGCTTCTTAAA+GGG | 0.367013 | 8.4:-6838056 | None:intergenic |
| CATCAGTATATCTGCCGTTC+AGG | 0.376368 | 8.4:+6835629 | MS.gene96338:CDS |
| TGCATTGGAGCGAGAGGTTG+AGG | 0.387646 | 8.4:+6835327 | MS.gene96338:CDS |
| CAGGGTTTGGGGCTTCGTCC+TGG | 0.388372 | 8.4:+6835591 | MS.gene96338:intron |
| GAGTTTCTTGTTCTCGGATG+TGG | 0.418174 | 8.4:+6837439 | MS.gene96338:CDS |
| CCTATGTCAAGGAGTAATTT+GGG | 0.418574 | 8.4:-6834851 | None:intergenic |
| GAACCTGAATATCGATAATA+CGG | 0.420565 | 8.4:-6834696 | None:intergenic |
| AATTTGGGAACACCATCTTC+AGG | 0.421843 | 8.4:-6834836 | None:intergenic |
| TTCGTCCTGGAGTTATTGAT+GGG | 0.440275 | 8.4:+6835604 | MS.gene96338:CDS |
| TCGTTTCCGACCAGTGTACT+TGG | 0.444474 | 8.4:-6838162 | None:intergenic |
| TGCAGGTGCGTTTGTCAGAC+AGG | 0.445651 | 8.4:+6838027 | MS.gene96338:intron |
| ATCTTTGGTTTCAGGGTTTG+GGG | 0.457597 | 8.4:+6835580 | MS.gene96338:intron |
| TTCATCTTCGCTCTCTTCAT+CGG | 0.463844 | 8.4:-6837521 | None:intergenic |
| TTTACTCAGTGACATGGGTC+AGG | 0.470372 | 8.4:+6835357 | MS.gene96338:CDS |
| GAGTGTCTCACCACTGAGTC+CGG | 0.480074 | 8.4:-6834959 | None:intergenic |
| AAGGATCAAATGAGAAGAAG+AGG | 0.492941 | 8.4:+6838119 | MS.gene96338:CDS |
| ATTTGTGTAGGTTGTGGATC+CGG | 0.495040 | 8.4:+6834940 | MS.gene96338:intron |
| TCAGGTGGTGCCACCCGCTC+CGG | 0.495539 | 8.4:-6834628 | None:intergenic |
| GAAAACATACTAAGCATTGA+AGG | 0.495940 | 8.4:-6835021 | None:intergenic |
| TTTAGCGATGGCGTCTCGAC+CGG | 0.500937 | 8.4:+6834609 | None:intergenic |
| TTGAATGCTGCAATGCATGC+TGG | 0.505367 | 8.4:+6836238 | MS.gene96338:CDS |
| GATGGCGTCTCGACCGGAGC+GGG | 0.514067 | 8.4:+6834615 | None:intergenic |
| AGAAGTGTACTTGCGAGCTT+CGG | 0.519171 | 8.4:-6834668 | None:intergenic |
| TAATAAGAGCAGCAAGGGAA+AGG | 0.520324 | 8.4:+6838079 | MS.gene96338:CDS |
| GTATCATCGTAGAATATCTC+AGG | 0.524688 | 8.4:-6834646 | None:intergenic |
| TTATACAGATGTTTGGCCAA+TGG | 0.529283 | 8.4:+6836160 | MS.gene96338:CDS |
| TACACTGGTCGGAAACGAAA+GGG | 0.531240 | 8.4:+6838167 | MS.gene96338:CDS |
| AAGAATAATAAGAGCAGCAA+GGG | 0.533361 | 8.4:+6838074 | MS.gene96338:CDS |
| TCTCAGAGGAAGGTCATCAA+TGG | 0.533812 | 8.4:+6834980 | MS.gene96338:CDS |
| CTCACTCTCAGAACGAGCAT+TGG | 0.536619 | 8.4:+6834799 | MS.gene96338:CDS |
| TTAACTCGTAGACATTGCAT+TGG | 0.536621 | 8.4:+6835312 | MS.gene96338:intron |
| CTTCTCGCTTTACCTGAAGA+TGG | 0.538980 | 8.4:+6834824 | MS.gene96338:CDS |
| GAGGAAGGTCATCAATGGAT+TGG | 0.539136 | 8.4:+6834985 | MS.gene96338:CDS |
| GGCGTCTCGACCGGAGCGGG+TGG | 0.542531 | 8.4:+6834618 | MS.gene96338:CDS |
| GCATTGGAGCGAGAGGTTGA+GGG | 0.553379 | 8.4:+6835328 | MS.gene96338:CDS |
| CCCAAATTACTCCTTGACAT+AGG | 0.568900 | 8.4:+6834851 | MS.gene96338:CDS |
| GAAATATAATACCTATGTCA+AGG | 0.583040 | 8.4:-6834862 | None:intergenic |
| CAATGCTCGTTCTGAGAGTG+AGG | 0.587056 | 8.4:-6834798 | None:intergenic |
| AGAGCAGCAAGGGAAAGGAA+TGG | 0.589939 | 8.4:+6838084 | MS.gene96338:CDS |
| ATAGATCTTCTCACAACCCT+CGG | 0.590662 | 8.4:+6835917 | MS.gene96338:CDS |
| GGAATGGATACTGAGGAAGA+AGG | 0.594390 | 8.4:+6838100 | MS.gene96338:CDS |
| ATGGCCCCATCAATAACTCC+AGG | 0.600380 | 8.4:-6835609 | None:intergenic |
| CCAGTGTACTTGGTATCTAG+AGG | 0.603613 | 8.4:-6838152 | None:intergenic |
| GTACACTGGTCGGAAACGAA+AGG | 0.604131 | 8.4:+6838166 | MS.gene96338:CDS |
| AAAGAATAATAAGAGCAGCA+AGG | 0.610322 | 8.4:+6838073 | MS.gene96338:CDS |
| TAGATACCAAGTACACTGGT+CGG | 0.625666 | 8.4:+6838156 | MS.gene96338:CDS |
| AGACATTGCATTGGAGCGAG+AGG | 0.633920 | 8.4:+6835321 | MS.gene96338:intron |
| ACGAAAGCATCCTTGTCCAA+AGG | 0.634791 | 8.4:+6837472 | MS.gene96338:CDS |
| CATACTTCAATCTTAACCGA+GGG | 0.636905 | 8.4:-6835933 | None:intergenic |
| GGTGAGACACTCTCAGAGGA+AGG | 0.638568 | 8.4:+6834970 | MS.gene96338:CDS |
| CAGTGTACTTGGTATCTAGA+GGG | 0.642930 | 8.4:-6838151 | None:intergenic |
| AACCTGAATATCGATAATAC+GGG | 0.644042 | 8.4:-6834695 | None:intergenic |
| CGATGGCGTCTCGACCGGAG+CGG | 0.660378 | 8.4:+6834614 | None:intergenic |
| ACATACTTCAATCTTAACCG+AGG | 0.662003 | 8.4:-6835934 | None:intergenic |
| AGGGAAAGGAATGGATACTG+AGG | 0.667986 | 8.4:+6838093 | MS.gene96338:CDS |
| CTGAACGGCAGATATACTGA+TGG | 0.670431 | 8.4:-6835628 | None:intergenic |
| TCGTCCTGGAGTTATTGATG+GGG | 0.672155 | 8.4:+6835605 | MS.gene96338:CDS |
| TTATCGAAAGCATACCTGAA+CGG | 0.672886 | 8.4:-6835643 | None:intergenic |
| TCATCGTAGAATATCTCAGG+TGG | 0.679096 | 8.4:-6834643 | None:intergenic |
| CATTCAAAATCAATTCACGC+TGG | 0.680289 | 8.4:-6836222 | None:intergenic |
| CCTCTAGATACCAAGTACAC+TGG | 0.682621 | 8.4:+6838152 | MS.gene96338:CDS |
| AAGATTTATTCATACCTGTG+TGG | 0.684315 | 8.4:-6836289 | None:intergenic |
| CAGTGGTGAGACACTCTCAG+AGG | 0.699390 | 8.4:+6834966 | MS.gene96338:CDS |
| GGTTGTGGATCCGGACTCAG+TGG | 0.702736 | 8.4:+6834949 | MS.gene96338:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAATATTATGTAACT+CGG | + | chr8.4:6836548-6836567 | MS.gene96338:intron | 10.0% |
| !!! | ATTATTATTTTTCTTATAAG+TGG | + | chr8.4:6837840-6837859 | MS.gene96338:intron | 10.0% |
| !!! | TAATGTTTTTTTTTTTTTTC+CGG | - | chr8.4:6836482-6836501 | None:intergenic | 10.0% |
| !!! | TTTTTTAAAAGGAAAAAAAT+AGG | - | chr8.4:6836737-6836756 | None:intergenic | 10.0% |
| !! | AAAAAACATTATAGTGAAAA+AGG | + | chr8.4:6836491-6836510 | MS.gene96338:intron | 15.0% |
| !! | AAAATAATATTATGTAACTC+GGG | + | chr8.4:6836549-6836568 | MS.gene96338:intron | 15.0% |
| !! | ATCACTATCTATTAATAAAA+TGG | + | chr8.4:6837703-6837722 | MS.gene96338:intron | 15.0% |
| !! | CATGCATATAATTTAAATTA+TGG | + | chr8.4:6837801-6837820 | MS.gene96338:intron | 15.0% |
| !! | GAATATGAATTATATAGTTA+TGG | - | chr8.4:6836116-6836135 | None:intergenic | 15.0% |
| !! | GTAGTATAATAAATAAAGAA+AGG | - | chr8.4:6835961-6835980 | None:intergenic | 15.0% |
| !! | TTATAGTGTAAAAATTTATC+CGG | + | chr8.4:6836460-6836479 | MS.gene96338:intron | 15.0% |
| !!! | AAGTCATTACTTTTTTTAAA+AGG | - | chr8.4:6836748-6836767 | None:intergenic | 15.0% |
| !!! | ATATTTGTTTTAACATATCT+CGG | + | chr8.4:6837013-6837032 | MS.gene96338:intron | 15.0% |
| !!! | CATATCTGAAATAAATTTAT+GGG | - | chr8.4:6837923-6837942 | None:intergenic | 15.0% |
| !!! | TCATATCTGAAATAAATTTA+TGG | - | chr8.4:6837924-6837943 | None:intergenic | 15.0% |
| !!! | TGAATAAAAACATATTTTTC+AGG | - | chr8.4:6836354-6836373 | None:intergenic | 15.0% |
| !!! | TTTTACTTTATATCACATTA+AGG | - | chr8.4:6836533-6836552 | None:intergenic | 15.0% |
| !! | CAATATTTGACTAATTATGT+TGG | + | chr8.4:6837067-6837086 | MS.gene96338:intron | 20.0% |
| !! | TAAGTTGTAACAAAATGAAT+AGG | - | chr8.4:6837649-6837668 | None:intergenic | 20.0% |
| !! | TTATTTGTGAGAATCTATAA+AGG | + | chr8.4:6836626-6836645 | MS.gene96338:intron | 20.0% |
| !!! | ACAATACATTGAAATGTTTT+TGG | - | chr8.4:6836811-6836830 | None:intergenic | 20.0% |
| !!! | ATAATTCATATTCTTTTGCA+GGG | + | chr8.4:6836123-6836142 | MS.gene96338:intron | 20.0% |
| !!! | TATAATTCATATTCTTTTGC+AGG | + | chr8.4:6836122-6836141 | MS.gene96338:intron | 20.0% |
| !!! | TTTAGTTTAAAAAATACTGC+AGG | + | chr8.4:6838010-6838029 | MS.gene96338:intron | 20.0% |
| ! | AAAAGAGATTCAACACAAAT+GGG | - | chr8.4:6836003-6836022 | None:intergenic | 25.0% |
| ! | AAACATAACTAAATAACACC+CGG | - | chr8.4:6835802-6835821 | None:intergenic | 25.0% |
| ! | AACAACAATACTTATGGTTA+TGG | - | chr8.4:6835251-6835270 | None:intergenic | 25.0% |
| ! | AAGTAAATTGCACTCTTTAA+AGG | - | chr8.4:6837737-6837756 | None:intergenic | 25.0% |
| ! | AATATAAGCTCGATACAAAA+AGG | - | chr8.4:6837992-6838011 | None:intergenic | 25.0% |
| ! | AATATATTTCAACTCACCTA+TGG | - | chr8.4:6837115-6837134 | None:intergenic | 25.0% |
| ! | ACGAACAATGAAAAATAGAT+AGG | - | chr8.4:6835274-6835293 | None:intergenic | 25.0% |
| ! | AGATTCTCACAAATAATGTT+AGG | - | chr8.4:6836622-6836641 | None:intergenic | 25.0% |
| ! | CATATCTAACGACATTAAAA+TGG | + | chr8.4:6835518-6835537 | MS.gene96338:intron | 25.0% |
| ! | GAAATATAATACCTATGTCA+AGG | - | chr8.4:6834865-6834884 | None:intergenic | 25.0% |
| ! | GGTGTATATGATAATTGAAA+TGG | - | chr8.4:6834915-6834934 | None:intergenic | 25.0% |
| ! | TAAAAGAGATTCAACACAAA+TGG | - | chr8.4:6836004-6836023 | None:intergenic | 25.0% |
| ! | TAATCCAATCTTAATAGAGA+TGG | - | chr8.4:6836064-6836083 | None:intergenic | 25.0% |
| ! | TACATCTTTATACAGATGTT+TGG | + | chr8.4:6836153-6836172 | MS.gene96338:CDS | 25.0% |
| ! | TATCATTTCTTCCATACTAT+AGG | - | chr8.4:6835711-6835730 | None:intergenic | 25.0% |
| ! | TCATGAGAAATGAATTGAAT+TGG | - | chr8.4:6834755-6834774 | None:intergenic | 25.0% |
| ! | TGTATCTTATACTGTATCTT+TGG | + | chr8.4:6835565-6835584 | MS.gene96338:intron | 25.0% |
| !! | AAGTAATGACTTGTACATTT+AGG | + | chr8.4:6836756-6836775 | MS.gene96338:intron | 25.0% |
| !! | ACTGCAAATTAAGTTGTTTA+TGG | - | chr8.4:6835062-6835081 | None:intergenic | 25.0% |
| !!! | CATTTTAATGTCGTTAGATA+TGG | - | chr8.4:6835520-6835539 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTTTTGTTCGATT+TGG | + | chr8.4:6837309-6837328 | MS.gene96338:intron | 25.0% |
| AAAAATAGGATGAAACTCCT+TGG | - | chr8.4:6836723-6836742 | None:intergenic | 30.0% | |
| AAAGAATAATAAGAGCAGCA+AGG | + | chr8.4:6838073-6838092 | MS.gene96338:CDS | 30.0% | |
| AAAGATTACGAGAATGTGTT+AGG | + | chr8.4:6835685-6835704 | MS.gene96338:intron | 30.0% | |
| AAATGATACCCAGTTATAGT+GGG | + | chr8.4:6835723-6835742 | MS.gene96338:intron | 30.0% | |
| AACCTGAATATCGATAATAC+GGG | - | chr8.4:6834698-6834717 | None:intergenic | 30.0% | |
| AAGAATAATAAGAGCAGCAA+GGG | + | chr8.4:6838074-6838093 | MS.gene96338:CDS | 30.0% | |
| AAGATTTATTCATACCTGTG+TGG | - | chr8.4:6836292-6836311 | None:intergenic | 30.0% | |
| AAGTTGTTTATGGAGAATAG+AGG | - | chr8.4:6835052-6835071 | None:intergenic | 30.0% | |
| AATAAATCTTGCAATACCAC+GGG | + | chr8.4:6836302-6836321 | MS.gene96338:intron | 30.0% | |
| AATGTGGAATATATGCTTAG+AGG | - | chr8.4:6836030-6836049 | None:intergenic | 30.0% | |
| ACAAACACAAAGCTGAAATT+AGG | - | chr8.4:6835394-6835413 | None:intergenic | 30.0% | |
| AGAAAAGAGTTTCTTGTTCT+CGG | + | chr8.4:6837433-6837452 | MS.gene96338:CDS | 30.0% | |
| AGAGTGCAATTTACTTTACA+TGG | + | chr8.4:6837741-6837760 | MS.gene96338:intron | 30.0% | |
| ATTCTTTCTCTGCTTCTTAA+AGG | - | chr8.4:6838060-6838079 | None:intergenic | 30.0% | |
| CTTACCATCTCTATTAAGAT+TGG | + | chr8.4:6836057-6836076 | MS.gene96338:intron | 30.0% | |
| GAACCTGAATATCGATAATA+CGG | - | chr8.4:6834699-6834718 | None:intergenic | 30.0% | |
| GAATAAATCTTGCAATACCA+CGG | + | chr8.4:6836301-6836320 | MS.gene96338:intron | 30.0% | |
| GATAAGTTAATCATTGCACA+TGG | - | chr8.4:6835498-6835517 | None:intergenic | 30.0% | |
| GATAGGAACAACAATACTTA+TGG | - | chr8.4:6835257-6835276 | None:intergenic | 30.0% | |
| GGATATAAAAATAGACGTTG+TGG | + | chr8.4:6836902-6836921 | MS.gene96338:intron | 30.0% | |
| TATCCTCAAAGAATGAACAA+AGG | - | chr8.4:6836887-6836906 | None:intergenic | 30.0% | |
| TCACAAATGTGTAATGTATC+TGG | + | chr8.4:6837226-6837245 | MS.gene96338:intron | 30.0% | |
| TTCTTTCTCTGCTTCTTAAA+GGG | - | chr8.4:6838059-6838078 | None:intergenic | 30.0% | |
| TTTATGGAGAATAGAGGAAA+AGG | - | chr8.4:6835046-6835065 | None:intergenic | 30.0% | |
| ! | ATACTGTATCTTTGGTTTCA+GGG | + | chr8.4:6835573-6835592 | MS.gene96338:intron | 30.0% |
| ! | GTATTATCGATATTCAGGTT+CGG | + | chr8.4:6834698-6834717 | MS.gene96338:intron | 30.0% |
| ! | TATACTGTATCTTTGGTTTC+AGG | + | chr8.4:6835572-6835591 | MS.gene96338:intron | 30.0% |
| ! | TGTGATCTATTTGATGATAG+TGG | + | chr8.4:6836943-6836962 | MS.gene96338:intron | 30.0% |
| ! | TTCATCTTCAGTTTTACCTT+TGG | - | chr8.4:6837491-6837510 | None:intergenic | 30.0% |
| ! | TTTATCCATTTCAGAGTATC+TGG | - | chr8.4:6836652-6836671 | None:intergenic | 30.0% |
| ! | TTTTCTACCAAAAGTGATTG+AGG | + | chr8.4:6835829-6835848 | MS.gene96338:intron | 30.0% |
| !! | ATGATAGTGGCACTTTAATT+GGG | + | chr8.4:6836956-6836975 | MS.gene96338:intron | 30.0% |
| !! | GAAAACATACTAAGCATTGA+AGG | - | chr8.4:6835024-6835043 | None:intergenic | 30.0% |
| !! | TCAATCACTTTTGGTAGAAA+AGG | - | chr8.4:6835830-6835849 | None:intergenic | 30.0% |
| !! | TTCAGGCAAATTACTTTTGA+TGG | - | chr8.4:6836337-6836356 | None:intergenic | 30.0% |
| !!! | CTAAGATGGTTTACTTTTTC+AGG | - | chr8.4:6837176-6837195 | None:intergenic | 30.0% |
| AAACTTGACCCACTATAACT+GGG | - | chr8.4:6835734-6835753 | None:intergenic | 35.0% | |
| AAGGATCAAATGAGAAGAAG+AGG | + | chr8.4:6838119-6838138 | MS.gene96338:CDS | 35.0% | |
| AATGCAACTCTCACTTAACA+TGG | - | chr8.4:6837885-6837904 | None:intergenic | 35.0% | |
| AATGTGTTAGGCCTATAGTA+TGG | + | chr8.4:6835697-6835716 | MS.gene96338:intron | 35.0% | |
| AATTGAATTGGAAGAGAGAG+AGG | - | chr8.4:6834743-6834762 | None:intergenic | 35.0% | |
| ACATACTTCAATCTTAACCG+AGG | - | chr8.4:6835937-6835956 | None:intergenic | 35.0% | |
| ACCTATGTCAAGGAGTAATT+TGG | - | chr8.4:6834855-6834874 | None:intergenic | 35.0% | |
| ACTCCTTTGTTCATTCTTTG+AGG | + | chr8.4:6836881-6836900 | MS.gene96338:intron | 35.0% | |
| AGGATACTTCTTCGTTACTT+TGG | + | chr8.4:6836776-6836795 | MS.gene96338:intron | 35.0% | |
| ATAAATCTTGCAATACCACG+GGG | + | chr8.4:6836303-6836322 | MS.gene96338:intron | 35.0% | |
| ATAAGCTCGATACAAAAAGG+AGG | - | chr8.4:6837989-6838008 | None:intergenic | 35.0% | |
| CACATGGACATAATCAGAAA+GGG | - | chr8.4:6835482-6835501 | None:intergenic | 35.0% | |
| CAGTATAAGATACAACCGTA+AGG | - | chr8.4:6835559-6835578 | None:intergenic | 35.0% | |
| CATACTTCAATCTTAACCGA+GGG | - | chr8.4:6835936-6835955 | None:intergenic | 35.0% | |
| CATTCAAAATCAATTCACGC+TGG | - | chr8.4:6836225-6836244 | None:intergenic | 35.0% | |
| CCTATGTCAAGGAGTAATTT+GGG | - | chr8.4:6834854-6834873 | None:intergenic | 35.0% | |
| GAAATGATACCCAGTTATAG+TGG | + | chr8.4:6835722-6835741 | MS.gene96338:intron | 35.0% | |
| GAATAGGTAGTGATCTTTGA+AGG | - | chr8.4:6837633-6837652 | None:intergenic | 35.0% | |
| GTATCATCGTAGAATATCTC+AGG | - | chr8.4:6834649-6834668 | None:intergenic | 35.0% | |
| TAAACTTGACCCACTATAAC+TGG | - | chr8.4:6835735-6835754 | None:intergenic | 35.0% | |
| TAAGCTCGATACAAAAAGGA+GGG | - | chr8.4:6837988-6838007 | None:intergenic | 35.0% | |
| TAAGTGAGAGTTGCATTTCA+AGG | + | chr8.4:6837888-6837907 | MS.gene96338:intron | 35.0% | |
| TTAACTCGTAGACATTGCAT+TGG | + | chr8.4:6835312-6835331 | MS.gene96338:intron | 35.0% | |
| TTATACAGATGTTTGGCCAA+TGG | + | chr8.4:6836160-6836179 | MS.gene96338:CDS | 35.0% | |
| TTATGACACCTACCAAATAC+TGG | - | chr8.4:6836406-6836425 | None:intergenic | 35.0% | |
| TTCCCGTATTATCGATATTC+AGG | + | chr8.4:6834693-6834712 | MS.gene96338:CDS | 35.0% | |
| ! | ACTCTTGTATGATAATGCAG+TGG | + | chr8.4:6835881-6835900 | MS.gene96338:intron | 35.0% |
| ! | GAGTAAACCTCAATCACTTT+TGG | - | chr8.4:6835839-6835858 | None:intergenic | 35.0% |
| ! | GATCTTTTACTCAGTGACAT+GGG | + | chr8.4:6835352-6835371 | MS.gene96338:CDS | 35.0% |
| ! | GGATACTTCTTCGTTACTTT+GGG | + | chr8.4:6836777-6836796 | MS.gene96338:intron | 35.0% |
| ! | GTGGGTCAAGTTTAAAGTTT+CGG | + | chr8.4:6835741-6835760 | MS.gene96338:intron | 35.0% |
| ! | TATCTTTGGTTTCAGGGTTT+GGG | + | chr8.4:6835579-6835598 | MS.gene96338:intron | 35.0% |
| ! | TGATCTTTTACTCAGTGACA+TGG | + | chr8.4:6835351-6835370 | MS.gene96338:CDS | 35.0% |
| ! | TTATCGAAAGCATACCTGAA+CGG | - | chr8.4:6835646-6835665 | None:intergenic | 35.0% |
| ! | TTCAGTTTTACCTTTGGACA+AGG | - | chr8.4:6837485-6837504 | None:intergenic | 35.0% |
| ! | TTTTGCACATGATCCCAAAT+AGG | + | chr8.4:6834775-6834794 | MS.gene96338:intron | 35.0% |
| !! | ACTTATGGTTATGGCTTGTT+TGG | - | chr8.4:6835242-6835261 | None:intergenic | 35.0% |
| !! | ATCACTTTTGGTAGAAAAGG+TGG | - | chr8.4:6835827-6835846 | None:intergenic | 35.0% |
| !! | GATGATAGTGGCACTTTAAT+TGG | + | chr8.4:6836955-6836974 | MS.gene96338:intron | 35.0% |
| AAAAACTGCTTTAGCGCCAT+TGG | - | chr8.4:6836179-6836198 | None:intergenic | 40.0% | |
| AATAACACCCGGTCCAAAAT+AGG | - | chr8.4:6835791-6835810 | None:intergenic | 40.0% | |
| AATTTGGGAACACCATCTTC+AGG | - | chr8.4:6834839-6834858 | None:intergenic | 40.0% | |
| ACCTATGGCTTGATTGATAC+GGG | - | chr8.4:6837100-6837119 | None:intergenic | 40.0% | |
| AGCATGGATTTCCACTAACT+GGG | + | chr8.4:6837380-6837399 | MS.gene96338:intron | 40.0% | |
| ATAACACCCGGTCCAAAATA+GGG | - | chr8.4:6835790-6835809 | None:intergenic | 40.0% | |
| ATAAGATACAACCGTAAGGC+AGG | - | chr8.4:6835555-6835574 | None:intergenic | 40.0% | |
| ATAGATCTTCTCACAACCCT+CGG | + | chr8.4:6835917-6835936 | MS.gene96338:CDS | 40.0% | |
| ATCAGCATCCAGTATTTGGT+AGG | + | chr8.4:6836395-6836414 | MS.gene96338:intron | 40.0% | |
| ATCCATCAGCATCCAGTATT+TGG | + | chr8.4:6836391-6836410 | MS.gene96338:intron | 40.0% | |
| ATTGGAAGAGAGAGAGGAAA+TGG | - | chr8.4:6834737-6834756 | None:intergenic | 40.0% | |
| ATTTGTGTAGGTTGTGGATC+CGG | + | chr8.4:6834940-6834959 | MS.gene96338:intron | 40.0% | |
| CACAACCTACACAAATCATG+CGG | - | chr8.4:6834936-6834955 | None:intergenic | 40.0% | |
| CACCTATGGCTTGATTGATA+CGG | - | chr8.4:6837101-6837120 | None:intergenic | 40.0% | |
| CAGTGTACTTGGTATCTAGA+GGG | - | chr8.4:6838154-6838173 | None:intergenic | 40.0% | |
| CCCAAATTACTCCTTGACAT+AGG | + | chr8.4:6834851-6834870 | MS.gene96338:CDS | 40.0% | |
| CTTGTTCTTCATGTTGCGAA+AGG | + | chr8.4:6836838-6836857 | MS.gene96338:intron | 40.0% | |
| CTTTCGCAACATGAAGAACA+AGG | - | chr8.4:6836840-6836859 | None:intergenic | 40.0% | |
| GAAACATTCATCGTGCCTAT+TGG | - | chr8.4:6837598-6837617 | None:intergenic | 40.0% | |
| GATGGTAAGTCAGAGAAATG+TGG | - | chr8.4:6836046-6836065 | None:intergenic | 40.0% | |
| GCACATGGACATAATCAGAA+AGG | - | chr8.4:6835483-6835502 | None:intergenic | 40.0% | |
| TAATAAGAGCAGCAAGGGAA+AGG | + | chr8.4:6838079-6838098 | MS.gene96338:CDS | 40.0% | |
| TACCAAATACTGGATGCTGA+TGG | - | chr8.4:6836396-6836415 | None:intergenic | 40.0% | |
| TAGATACCAAGTACACTGGT+CGG | + | chr8.4:6838156-6838175 | MS.gene96338:CDS | 40.0% | |
| TCATCGTAGAATATCTCAGG+TGG | - | chr8.4:6834646-6834665 | None:intergenic | 40.0% | |
| TCGGTTCAGGAATTTCCAAT+AGG | + | chr8.4:6837580-6837599 | MS.gene96338:intron | 40.0% | |
| TCTCACCACATCTGTGTATT+CGG | + | chr8.4:6837561-6837580 | MS.gene96338:intron | 40.0% | |
| TGGACATAATCAGAAAGGGA+AGG | - | chr8.4:6835478-6835497 | None:intergenic | 40.0% | |
| TTCATCTTCGCTCTCTTCAT+CGG | - | chr8.4:6837524-6837543 | None:intergenic | 40.0% | |
| TTCGTCCTGGAGTTATTGAT+GGG | + | chr8.4:6835604-6835623 | MS.gene96338:CDS | 40.0% | |
| ! | AAAGGCCAGATACTCTGAAA+TGG | + | chr8.4:6836644-6836663 | MS.gene96338:intron | 40.0% |
| ! | ATACACCGCATGATTTGTGT+AGG | + | chr8.4:6834928-6834947 | MS.gene96338:intron | 40.0% |
| ! | ATCTTTGGTTTCAGGGTTTG+GGG | + | chr8.4:6835580-6835599 | MS.gene96338:intron | 40.0% |
| ! | GTATCTTTGGTTTCAGGGTT+TGG | + | chr8.4:6835578-6835597 | MS.gene96338:intron | 40.0% |
| ! | TGCTACCACTTTCCCTATTT+TGG | + | chr8.4:6835775-6835794 | MS.gene96338:intron | 40.0% |
| ! | TGGTAGGTGTCATAATCACT+GGG | + | chr8.4:6836411-6836430 | MS.gene96338:intron | 40.0% |
| ! | TTGGTAGGTGTCATAATCAC+TGG | + | chr8.4:6836410-6836429 | MS.gene96338:intron | 40.0% |
| !!! | TACTTTTTCAGGTGAGAGTG+AGG | - | chr8.4:6837165-6837184 | None:intergenic | 40.0% |
| AACAAGCAGTGACAGGAGAA+TGG | - | chr8.4:6836595-6836614 | None:intergenic | 45.0% | |
| AACTCCTTGGACGCATATAC+AGG | - | chr8.4:6836710-6836729 | None:intergenic | 45.0% | |
| AGGGAAAGGAATGGATACTG+AGG | + | chr8.4:6838093-6838112 | MS.gene96338:CDS | 45.0% | |
| AGTCACACAAGCGCTTATGT+CGG | + | chr8.4:6835193-6835212 | MS.gene96338:intron | 45.0% | |
| ATCCCATCTTTCATCTCAGC+AGG | - | chr8.4:6837201-6837220 | None:intergenic | 45.0% | |
| CACATCTGTGTATTCGGTTC+AGG | + | chr8.4:6837567-6837586 | MS.gene96338:intron | 45.0% | |
| CATCAGTATATCTGCCGTTC+AGG | + | chr8.4:6835629-6835648 | MS.gene96338:CDS | 45.0% | |
| CCAGTGTACTTGGTATCTAG+AGG | - | chr8.4:6838155-6838174 | None:intergenic | 45.0% | |
| CCTCTAGATACCAAGTACAC+TGG | + | chr8.4:6838152-6838171 | MS.gene96338:CDS | 45.0% | |
| CTGAACCGAATACACAGATG+TGG | - | chr8.4:6837569-6837588 | None:intergenic | 45.0% | |
| CTGAACGGCAGATATACTGA+TGG | - | chr8.4:6835631-6835650 | None:intergenic | 45.0% | |
| CTTCGTCCTGGAGTTATTGA+TGG | + | chr8.4:6835603-6835622 | MS.gene96338:CDS | 45.0% | |
| CTTCTCGCTTTACCTGAAGA+TGG | + | chr8.4:6834824-6834843 | MS.gene96338:CDS | 45.0% | |
| GACAATTGTTCCCCAGTTAG+TGG | - | chr8.4:6837394-6837413 | None:intergenic | 45.0% | |
| GAGCATGGATTTCCACTAAC+TGG | + | chr8.4:6837379-6837398 | MS.gene96338:intron | 45.0% | |
| GAGGAAGGTCATCAATGGAT+TGG | + | chr8.4:6834985-6835004 | MS.gene96338:CDS | 45.0% | |
| GAGTTTCTTGTTCTCGGATG+TGG | + | chr8.4:6837439-6837458 | MS.gene96338:CDS | 45.0% | |
| GCATGGATTTCCACTAACTG+GGG | + | chr8.4:6837381-6837400 | MS.gene96338:intron | 45.0% | |
| GGAATGGATACTGAGGAAGA+AGG | + | chr8.4:6838100-6838119 | MS.gene96338:CDS | 45.0% | |
| GTGACAGGAGAATGGATGAA+TGG | - | chr8.4:6836587-6836606 | None:intergenic | 45.0% | |
| GTGGAAATCCATGCTCAAGA+AGG | - | chr8.4:6837375-6837394 | None:intergenic | 45.0% | |
| GTGTCATAATCACTGGGGAA+TGG | + | chr8.4:6836417-6836436 | MS.gene96338:intron | 45.0% | |
| TACACTGGTCGGAAACGAAA+GGG | + | chr8.4:6838167-6838186 | MS.gene96338:CDS | 45.0% | |
| TACTCCTGTATATGCGTCCA+AGG | + | chr8.4:6836703-6836722 | MS.gene96338:intron | 45.0% | |
| TCGTCCTGGAGTTATTGATG+GGG | + | chr8.4:6835605-6835624 | MS.gene96338:CDS | 45.0% | |
| TCTCAGAGGAAGGTCATCAA+TGG | + | chr8.4:6834980-6834999 | MS.gene96338:CDS | 45.0% | |
| TCTGAGAGTGAGGCCTATTT+GGG | - | chr8.4:6834791-6834810 | None:intergenic | 45.0% | |
| TTGAATGCTGCAATGCATGC+TGG | + | chr8.4:6836238-6836257 | MS.gene96338:CDS | 45.0% | |
| TTGCATAGCCTTCTTGAGCA+TGG | + | chr8.4:6837364-6837383 | MS.gene96338:intron | 45.0% | |
| TTTACTCAGTGACATGGGTC+AGG | + | chr8.4:6835357-6835376 | MS.gene96338:CDS | 45.0% | |
| ! | AGAAGTGTACTTGCGAGCTT+CGG | - | chr8.4:6834671-6834690 | None:intergenic | 45.0% |
| ! | ATGCATGCTGGATTTTCTGG+TGG | + | chr8.4:6836250-6836269 | MS.gene96338:CDS | 45.0% |
| ! | CGCATGATTTGTGTAGGTTG+TGG | + | chr8.4:6834934-6834953 | MS.gene96338:intron | 45.0% |
| ! | GCAATGCATGCTGGATTTTC+TGG | + | chr8.4:6836247-6836266 | MS.gene96338:CDS | 45.0% |
| ! | GGTAGGTGTCATAATCACTG+GGG | + | chr8.4:6836412-6836431 | MS.gene96338:intron | 45.0% |
| ! | TCTCCTGTCACTGCTTGTTT+TGG | + | chr8.4:6836596-6836615 | MS.gene96338:intron | 45.0% |
| ! | TTCTGAGAGTGAGGCCTATT+TGG | - | chr8.4:6834792-6834811 | None:intergenic | 45.0% |
| !! | ACGAAAGCATCCTTGTCCAA+AGG | + | chr8.4:6837472-6837491 | MS.gene96338:CDS | 45.0% |
| !! | ATTTTCTGGTGGCATAGTGG+TGG | + | chr8.4:6836261-6836280 | MS.gene96338:CDS | 45.0% |
| !! | CACTTTCCCTATTTTGGACC+GGG | + | chr8.4:6835781-6835800 | MS.gene96338:intron | 45.0% |
| !! | CCACTTTCCCTATTTTGGAC+CGG | + | chr8.4:6835780-6835799 | MS.gene96338:intron | 45.0% |
| !! | TCACGCTGGTCTACATTTTC+AGG | - | chr8.4:6836211-6836230 | None:intergenic | 45.0% |
| !! | TGGATTTTCTGGTGGCATAG+TGG | + | chr8.4:6836258-6836277 | MS.gene96338:CDS | 45.0% |
| !!! | TAGTGGTGGATTTTCCACAC+AGG | + | chr8.4:6836275-6836294 | MS.gene96338:CDS | 45.0% |
| AAGCGCTTGTGTGACTGTCA+AGG | - | chr8.4:6835189-6835208 | None:intergenic | 50.0% | |
| AGACATTGCATTGGAGCGAG+AGG | + | chr8.4:6835321-6835340 | MS.gene96338:intron | 50.0% | |
| AGAGCAGCAAGGGAAAGGAA+TGG | + | chr8.4:6838084-6838103 | MS.gene96338:CDS | 50.0% | |
| AGGCCAAAACAAGCAGTGAC+AGG | - | chr8.4:6836602-6836621 | None:intergenic | 50.0% | |
| ATGCTCTGCATCCTGCCTTA+CGG | + | chr8.4:6835541-6835560 | MS.gene96338:intron | 50.0% | |
| ATGGCCCCATCAATAACTCC+AGG | - | chr8.4:6835612-6835631 | None:intergenic | 50.0% | |
| CCGGTCCAAAATAGGGAAAG+TGG | - | chr8.4:6835783-6835802 | None:intergenic | 50.0% | |
| CGCCTGCTGAGATGAAAGAT+GGG | + | chr8.4:6837196-6837215 | MS.gene96338:intron | 50.0% | |
| CTCACTCTCAGAACGAGCAT+TGG | + | chr8.4:6834799-6834818 | MS.gene96338:CDS | 50.0% | |
| GCCCGTATCAATCAAGCCAT+AGG | + | chr8.4:6837096-6837115 | MS.gene96338:intron | 50.0% | |
| GTACACTGGTCGGAAACGAA+AGG | + | chr8.4:6838166-6838185 | MS.gene96338:CDS | 50.0% | |
| TCGTTTCCGACCAGTGTACT+TGG | - | chr8.4:6838165-6838184 | None:intergenic | 50.0% | |
| !! | CAATGCTCGTTCTGAGAGTG+AGG | - | chr8.4:6834801-6834820 | None:intergenic | 50.0% |
| CAGTGGTGAGACACTCTCAG+AGG | + | chr8.4:6834966-6834985 | MS.gene96338:CDS | 55.0% | |
| CATCTCAGCAGGCGCTAAGA+TGG | - | chr8.4:6837190-6837209 | None:intergenic | 55.0% | |
| GAGTGTCTCACCACTGAGTC+CGG | - | chr8.4:6834962-6834981 | None:intergenic | 55.0% | |
| GCATTGGAGCGAGAGGTTGA+GGG | + | chr8.4:6835328-6835347 | MS.gene96338:CDS | 55.0% | |
| GCGCCTGCTGAGATGAAAGA+TGG | + | chr8.4:6837195-6837214 | MS.gene96338:intron | 55.0% | |
| GGTGAGACACTCTCAGAGGA+AGG | + | chr8.4:6834970-6834989 | MS.gene96338:CDS | 55.0% | |
| TGCAGGTGCGTTTGTCAGAC+AGG | + | chr8.4:6838027-6838046 | MS.gene96338:intron | 55.0% | |
| TGCATTGGAGCGAGAGGTTG+AGG | + | chr8.4:6835327-6835346 | MS.gene96338:CDS | 55.0% | |
| TTGATGGAACAGAGACCCCG+TGG | - | chr8.4:6836321-6836340 | None:intergenic | 55.0% | |
| CGCATGTCACGAGTACGTCG+TGG | - | chr8.4:6836679-6836698 | None:intergenic | 60.0% | |
| GGTTGTGGATCCGGACTCAG+TGG | + | chr8.4:6834949-6834968 | MS.gene96338:intron | 60.0% | |
| ! | CAGGGTTTGGGGCTTCGTCC+TGG | + | chr8.4:6835591-6835610 | MS.gene96338:intron | 65.0% |
| !! | TCAGGTGGTGCCACCCGCTC+CGG | - | chr8.4:6834631-6834650 | None:intergenic | 70.0% |
| ! | GGCGTCTCGACCGGAGCGGG+TGG | + | chr8.4:6834618-6834637 | MS.gene96338:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 6834616 | 6838199 | 6834616 | ID=MS.gene96338 |
| chr8.4 | mRNA | 6834616 | 6838199 | 6834616 | ID=MS.gene96338.t1;Parent=MS.gene96338 |
| chr8.4 | exon | 6834616 | 6834714 | 6834616 | ID=MS.gene96338.t1.exon1;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6834616 | 6834714 | 6834616 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| chr8.4 | exon | 6834797 | 6834872 | 6834797 | ID=MS.gene96338.t1.exon2;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6834797 | 6834872 | 6834797 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| chr8.4 | exon | 6834950 | 6835033 | 6834950 | ID=MS.gene96338.t1.exon3;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6834950 | 6835033 | 6834950 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| chr8.4 | exon | 6835323 | 6835378 | 6835323 | ID=MS.gene96338.t1.exon4;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6835323 | 6835378 | 6835323 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| chr8.4 | exon | 6835594 | 6835650 | 6835594 | ID=MS.gene96338.t1.exon5;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6835594 | 6835650 | 6835594 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| chr8.4 | exon | 6835901 | 6835950 | 6835901 | ID=MS.gene96338.t1.exon6;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6835901 | 6835950 | 6835901 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| chr8.4 | exon | 6836144 | 6836296 | 6836144 | ID=MS.gene96338.t1.exon7;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6836144 | 6836296 | 6836144 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| chr8.4 | exon | 6837423 | 6837555 | 6837423 | ID=MS.gene96338.t1.exon8;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6837423 | 6837555 | 6837423 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| chr8.4 | exon | 6838032 | 6838199 | 6838032 | ID=MS.gene96338.t1.exon9;Parent=MS.gene96338.t1 |
| chr8.4 | CDS | 6838032 | 6838199 | 6838032 | ID=cds.MS.gene96338.t1;Parent=MS.gene96338.t1 |
| Gene Sequence |
| Protein sequence |
