Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97335.t1 | XP_003592769.1 | 95.8 | 313 | 12 | 1 | 1 | 312 | 18 | 330 | 1.40E-169 | 605.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97335.t1 | P22195 | 66.2 | 305 | 98 | 4 | 1 | 304 | 16 | 316 | 1.5e-111 | 404.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97335.t1 | G7IF04 | 95.8 | 313 | 12 | 1 | 1 | 312 | 18 | 330 | 9.9e-170 | 605.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene97335 | 0.804648 | 1.95E-49 | -1.69E-46 |
| MS.gene050329 | MS.gene97335 | 0.835909 | 1.28E-56 | -1.69E-46 |
| MS.gene050720 | MS.gene97335 | 0.807122 | 5.90E-50 | -1.69E-46 |
| MS.gene051158 | MS.gene97335 | 0.818322 | 2.08E-52 | -1.69E-46 |
| MS.gene051996 | MS.gene97335 | 0.850839 | 1.31E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene97335 | 0.81198 | 5.34E-51 | -1.69E-46 |
| MS.gene052223 | MS.gene97335 | 0.857781 | 1.29E-62 | -1.69E-46 |
| MS.gene05233 | MS.gene97335 | 0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene97335 | 0.835647 | 1.49E-56 | -1.69E-46 |
| MS.gene054138 | MS.gene97335 | 0.807831 | 4.17E-50 | -1.69E-46 |
| MS.gene054147 | MS.gene97335 | 0.801422 | 9.07E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene97335 | -0.801688 | 8.00E-49 | -1.69E-46 |
| MS.gene054277 | MS.gene97335 | 0.833878 | 4.14E-56 | -1.69E-46 |
| MS.gene054290 | MS.gene97335 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene97335 | 0.860624 | 1.81E-63 | -1.69E-46 |
| MS.gene055595 | MS.gene97335 | 0.81883 | 1.60E-52 | -1.69E-46 |
| MS.gene055597 | MS.gene97335 | 0.810844 | 9.42E-51 | -1.69E-46 |
| MS.gene055601 | MS.gene97335 | 0.840659 | 7.61E-58 | -1.69E-46 |
| MS.gene056076 | MS.gene97335 | 0.807144 | 5.83E-50 | -1.69E-46 |
| MS.gene056330 | MS.gene97335 | 0.874488 | 6.50E-68 | -1.69E-46 |
| MS.gene056680 | MS.gene97335 | 0.824925 | 6.20E-54 | -1.69E-46 |
| MS.gene056690 | MS.gene97335 | 0.817287 | 3.57E-52 | -1.69E-46 |
| MS.gene056691 | MS.gene97335 | 0.838763 | 2.37E-57 | -1.69E-46 |
| MS.gene056899 | MS.gene97335 | 0.861033 | 1.36E-63 | -1.69E-46 |
| MS.gene056920 | MS.gene97335 | 0.843989 | 9.98E-59 | -1.69E-46 |
| MS.gene056922 | MS.gene97335 | 0.804485 | 2.11E-49 | -1.69E-46 |
| MS.gene056923 | MS.gene97335 | 0.834054 | 3.74E-56 | -1.69E-46 |
| MS.gene056924 | MS.gene97335 | 0.842889 | 1.96E-58 | -1.69E-46 |
| MS.gene057544 | MS.gene97335 | 0.802493 | 5.46E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene97335 | -0.807271 | 5.48E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene97335 | -0.803763 | 2.99E-49 | -1.69E-46 |
| MS.gene058177 | MS.gene97335 | 0.807205 | 5.66E-50 | -1.69E-46 |
| MS.gene058218 | MS.gene97335 | 0.851194 | 1.04E-60 | -1.69E-46 |
| MS.gene059043 | MS.gene97335 | 0.822107 | 2.83E-53 | -1.69E-46 |
| MS.gene059328 | MS.gene97335 | 0.807782 | 4.27E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene97335 | -0.809329 | 2.00E-50 | -1.69E-46 |
| MS.gene059891 | MS.gene97335 | 0.812176 | 4.84E-51 | -1.69E-46 |
| MS.gene059892 | MS.gene97335 | 0.804027 | 2.63E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene97335 | 0.853162 | 2.87E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97335.t1 | MTR_1g115900 | 95.847 | 313 | 12 | 1 | 1 | 312 | 18 | 330 | 0.0 | 619 |
| MS.gene97335.t1 | MTR_7g026990 | 63.636 | 308 | 105 | 4 | 1 | 305 | 20 | 323 | 8.07e-138 | 393 |
| MS.gene97335.t1 | MTR_7g072510 | 61.873 | 299 | 110 | 3 | 7 | 304 | 17 | 312 | 3.84e-133 | 380 |
| MS.gene97335.t1 | MTR_7g072480 | 61.967 | 305 | 111 | 4 | 1 | 304 | 16 | 316 | 2.11e-131 | 376 |
| MS.gene97335.t1 | MTR_4g029200 | 59.016 | 305 | 121 | 3 | 1 | 304 | 37 | 338 | 7.51e-127 | 365 |
| MS.gene97335.t1 | MTR_4g029190 | 61.258 | 302 | 110 | 5 | 7 | 304 | 42 | 340 | 7.63e-126 | 363 |
| MS.gene97335.t1 | MTR_2g084080 | 57.705 | 305 | 125 | 3 | 1 | 304 | 16 | 317 | 3.04e-123 | 356 |
| MS.gene97335.t1 | MTR_2g084110 | 57.049 | 305 | 127 | 3 | 1 | 304 | 16 | 317 | 7.44e-123 | 355 |
| MS.gene97335.t1 | MTR_3g094650 | 57.566 | 304 | 123 | 4 | 1 | 301 | 19 | 319 | 3.03e-122 | 353 |
| MS.gene97335.t1 | MTR_2g084020 | 56.721 | 305 | 129 | 2 | 1 | 304 | 16 | 318 | 4.94e-121 | 350 |
| MS.gene97335.t1 | MTR_3g094670 | 59.933 | 297 | 113 | 4 | 8 | 301 | 26 | 319 | 4.08e-119 | 345 |
| MS.gene97335.t1 | MTR_3g072190 | 56.566 | 297 | 125 | 3 | 9 | 304 | 25 | 318 | 8.64e-119 | 344 |
| MS.gene97335.t1 | MTR_3g466180 | 61.204 | 299 | 112 | 3 | 7 | 304 | 28 | 323 | 1.19e-118 | 344 |
| MS.gene97335.t1 | MTR_2g084010 | 56.066 | 305 | 131 | 2 | 1 | 304 | 16 | 318 | 3.42e-118 | 343 |
| MS.gene97335.t1 | MTR_2g084090 | 55.882 | 306 | 130 | 4 | 1 | 304 | 16 | 318 | 8.46e-116 | 337 |
| MS.gene97335.t1 | MTR_3g094630 | 59.667 | 300 | 115 | 4 | 8 | 304 | 26 | 322 | 9.27e-116 | 337 |
| MS.gene97335.t1 | MTR_3g466200 | 54.545 | 308 | 132 | 5 | 1 | 304 | 17 | 320 | 2.85e-114 | 333 |
| MS.gene97335.t1 | MTR_2g084000 | 55.034 | 298 | 131 | 2 | 8 | 304 | 24 | 319 | 1.74e-113 | 331 |
| MS.gene97335.t1 | MTR_5g074970 | 54.305 | 302 | 130 | 4 | 8 | 304 | 28 | 326 | 9.60e-113 | 329 |
| MS.gene97335.t1 | MTR_5g083860 | 55.667 | 300 | 127 | 4 | 8 | 304 | 29 | 325 | 2.40e-112 | 328 |
| MS.gene97335.t1 | MTR_5g074760 | 54.934 | 304 | 129 | 6 | 6 | 304 | 21 | 321 | 3.32e-111 | 325 |
| MS.gene97335.t1 | MTR_5g074740 | 54.934 | 304 | 129 | 6 | 6 | 304 | 21 | 321 | 9.05e-111 | 324 |
| MS.gene97335.t1 | MTR_4g029170 | 52.288 | 306 | 140 | 4 | 2 | 304 | 19 | 321 | 8.35e-109 | 319 |
| MS.gene97335.t1 | MTR_5g074860 | 52.145 | 303 | 137 | 5 | 6 | 303 | 25 | 324 | 8.93e-109 | 319 |
| MS.gene97335.t1 | MTR_5g074710 | 52.961 | 304 | 135 | 5 | 6 | 304 | 21 | 321 | 6.70e-108 | 317 |
| MS.gene97335.t1 | MTR_4g029180 | 52.881 | 295 | 133 | 4 | 13 | 304 | 30 | 321 | 1.74e-105 | 311 |
| MS.gene97335.t1 | MTR_4g083710 | 52.649 | 302 | 136 | 4 | 8 | 304 | 25 | 324 | 8.93e-105 | 309 |
| MS.gene97335.t1 | MTR_3g467600 | 50.820 | 305 | 143 | 5 | 5 | 304 | 22 | 324 | 8.21e-103 | 304 |
| MS.gene97335.t1 | MTR_4g074995 | 51.827 | 301 | 127 | 4 | 8 | 304 | 22 | 308 | 8.36e-103 | 303 |
| MS.gene97335.t1 | MTR_3g072190 | 56.522 | 253 | 106 | 3 | 53 | 304 | 2 | 251 | 1.52e-97 | 288 |
| MS.gene97335.t1 | MTR_5g017860 | 47.727 | 308 | 150 | 4 | 5 | 304 | 22 | 326 | 1.10e-95 | 286 |
| MS.gene97335.t1 | MTR_5g017850 | 46.885 | 305 | 151 | 4 | 8 | 304 | 25 | 326 | 1.77e-94 | 283 |
| MS.gene97335.t1 | MTR_4g074990 | 49.838 | 309 | 132 | 5 | 1 | 304 | 15 | 305 | 2.15e-94 | 282 |
| MS.gene97335.t1 | MTR_5g021060 | 47.525 | 303 | 149 | 3 | 10 | 304 | 30 | 330 | 3.87e-94 | 282 |
| MS.gene97335.t1 | MTR_8g076820 | 47.195 | 303 | 150 | 3 | 10 | 304 | 30 | 330 | 6.98e-93 | 279 |
| MS.gene97335.t1 | MTR_7g093370 | 45.928 | 307 | 154 | 5 | 8 | 304 | 67 | 371 | 1.63e-92 | 280 |
| MS.gene97335.t1 | MTR_1g054205 | 47.097 | 310 | 152 | 6 | 6 | 305 | 20 | 327 | 2.08e-92 | 278 |
| MS.gene97335.t1 | MTR_2g029815 | 46.945 | 311 | 154 | 5 | 6 | 307 | 25 | 333 | 4.98e-92 | 278 |
| MS.gene97335.t1 | MTR_2g029800 | 45.833 | 312 | 158 | 4 | 5 | 307 | 24 | 333 | 1.68e-89 | 271 |
| MS.gene97335.t1 | MTR_2g029750 | 45.659 | 311 | 158 | 4 | 6 | 307 | 25 | 333 | 2.73e-89 | 271 |
| MS.gene97335.t1 | MTR_1g022970 | 46.711 | 304 | 151 | 4 | 10 | 304 | 46 | 347 | 3.43e-89 | 270 |
| MS.gene97335.t1 | MTR_2g028980 | 45.253 | 316 | 162 | 4 | 1 | 307 | 20 | 333 | 5.64e-89 | 270 |
| MS.gene97335.t1 | MTR_5g014100 | 47.302 | 315 | 149 | 5 | 4 | 304 | 20 | 331 | 1.40e-88 | 268 |
| MS.gene97335.t1 | MTR_4g074980 | 49.498 | 299 | 122 | 5 | 8 | 304 | 23 | 294 | 2.39e-88 | 266 |
| MS.gene97335.t1 | MTR_2g029740 | 45.338 | 311 | 159 | 4 | 6 | 307 | 25 | 333 | 4.78e-88 | 268 |
| MS.gene97335.t1 | MTR_2g029830 | 44.984 | 309 | 159 | 4 | 8 | 307 | 26 | 332 | 1.76e-87 | 266 |
| MS.gene97335.t1 | MTR_2g029820 | 44.231 | 312 | 163 | 4 | 5 | 307 | 24 | 333 | 2.30e-87 | 266 |
| MS.gene97335.t1 | MTR_4g125940 | 43.671 | 316 | 163 | 5 | 1 | 305 | 19 | 330 | 2.45e-87 | 265 |
| MS.gene97335.t1 | MTR_2g029560 | 44.337 | 309 | 161 | 4 | 8 | 307 | 22 | 328 | 8.01e-87 | 264 |
| MS.gene97335.t1 | MTR_2g029850 | 45.397 | 315 | 161 | 5 | 6 | 311 | 25 | 337 | 7.59e-85 | 259 |
| MS.gene97335.t1 | MTR_5g049280 | 43.087 | 311 | 163 | 7 | 6 | 304 | 29 | 337 | 9.37e-85 | 258 |
| MS.gene97335.t1 | MTR_2g040000 | 46.474 | 312 | 149 | 7 | 7 | 305 | 26 | 332 | 1.76e-84 | 258 |
| MS.gene97335.t1 | MTR_2g029730 | 44.660 | 309 | 160 | 5 | 8 | 307 | 23 | 329 | 2.54e-84 | 258 |
| MS.gene97335.t1 | MTR_4g122640 | 45.098 | 306 | 160 | 3 | 5 | 304 | 33 | 336 | 2.87e-84 | 257 |
| MS.gene97335.t1 | MTR_2g029860 | 44.051 | 311 | 163 | 4 | 6 | 307 | 25 | 333 | 5.69e-84 | 257 |
| MS.gene97335.t1 | MTR_0155s0040 | 42.105 | 304 | 167 | 6 | 2 | 304 | 20 | 315 | 2.35e-81 | 249 |
| MS.gene97335.t1 | MTR_4g074980 | 54.506 | 233 | 99 | 4 | 8 | 235 | 23 | 253 | 3.04e-81 | 246 |
| MS.gene97335.t1 | MTR_5g074860 | 43.894 | 303 | 123 | 6 | 6 | 303 | 25 | 285 | 1.24e-80 | 246 |
| MS.gene97335.t1 | MTR_3g092990 | 43.226 | 310 | 164 | 5 | 5 | 305 | 21 | 327 | 2.09e-79 | 244 |
| MS.gene97335.t1 | MTR_2g029910 | 43.810 | 315 | 165 | 6 | 6 | 310 | 26 | 338 | 2.61e-79 | 245 |
| MS.gene97335.t1 | MTR_4g030890 | 42.857 | 308 | 162 | 5 | 5 | 304 | 95 | 396 | 1.03e-78 | 246 |
| MS.gene97335.t1 | MTR_1g077000 | 42.140 | 299 | 159 | 6 | 10 | 304 | 39 | 327 | 2.76e-78 | 241 |
| MS.gene97335.t1 | MTR_2g008710 | 43.377 | 302 | 153 | 6 | 14 | 304 | 31 | 325 | 1.89e-77 | 239 |
| MS.gene97335.t1 | MTR_4g031140 | 41.558 | 308 | 166 | 5 | 6 | 305 | 24 | 325 | 6.83e-77 | 238 |
| MS.gene97335.t1 | MTR_4g125940 | 44.964 | 278 | 138 | 5 | 39 | 305 | 2 | 275 | 1.85e-76 | 235 |
| MS.gene97335.t1 | MTR_1g038680 | 42.904 | 303 | 158 | 7 | 14 | 304 | 33 | 332 | 6.68e-76 | 236 |
| MS.gene97335.t1 | MTR_2g088770 | 40.895 | 313 | 172 | 6 | 1 | 304 | 17 | 325 | 4.65e-75 | 233 |
| MS.gene97335.t1 | MTR_1g101830 | 42.810 | 306 | 162 | 6 | 6 | 304 | 23 | 322 | 5.90e-75 | 233 |
| MS.gene97335.t1 | MTR_4g046713 | 40.895 | 313 | 171 | 7 | 1 | 304 | 19 | 326 | 2.57e-74 | 231 |
| MS.gene97335.t1 | MTR_7g086820 | 42.053 | 302 | 163 | 6 | 8 | 304 | 18 | 312 | 4.74e-74 | 230 |
| MS.gene97335.t1 | MTR_1g086320 | 41.083 | 314 | 168 | 7 | 4 | 304 | 24 | 333 | 5.94e-73 | 228 |
| MS.gene97335.t1 | MTR_1g025980 | 39.103 | 312 | 173 | 7 | 1 | 303 | 14 | 317 | 2.34e-72 | 226 |
| MS.gene97335.t1 | MTR_1g086490 | 40.938 | 320 | 167 | 6 | 4 | 304 | 24 | 340 | 7.80e-72 | 226 |
| MS.gene97335.t1 | MTR_6g027440 | 41.447 | 304 | 167 | 7 | 8 | 306 | 19 | 316 | 1.57e-71 | 224 |
| MS.gene97335.t1 | MTR_5g022870 | 40.645 | 310 | 165 | 7 | 4 | 304 | 17 | 316 | 2.54e-71 | 223 |
| MS.gene97335.t1 | MTR_7g107520 | 40.514 | 311 | 170 | 6 | 2 | 304 | 17 | 320 | 2.57e-70 | 221 |
| MS.gene97335.t1 | MTR_8g075100 | 39.550 | 311 | 167 | 7 | 4 | 304 | 20 | 319 | 3.16e-69 | 218 |
| MS.gene97335.t1 | MTR_2g437770 | 40.132 | 304 | 163 | 7 | 10 | 305 | 50 | 342 | 1.07e-68 | 218 |
| MS.gene97335.t1 | MTR_7g086870 | 39.130 | 299 | 175 | 6 | 8 | 305 | 20 | 312 | 1.49e-68 | 216 |
| MS.gene97335.t1 | MTR_4g114210 | 40.881 | 318 | 167 | 9 | 1 | 304 | 10 | 320 | 3.65e-68 | 215 |
| MS.gene97335.t1 | MTR_2g029830 | 43.893 | 262 | 136 | 4 | 55 | 307 | 5 | 264 | 1.19e-67 | 213 |
| MS.gene97335.t1 | MTR_3g092990 | 40.968 | 310 | 160 | 6 | 5 | 305 | 21 | 316 | 1.38e-67 | 214 |
| MS.gene97335.t1 | MTR_2g077990 | 39.458 | 332 | 159 | 8 | 8 | 300 | 74 | 402 | 4.10e-66 | 213 |
| MS.gene97335.t1 | MTR_2g067440 | 39.940 | 333 | 153 | 10 | 8 | 300 | 58 | 383 | 1.25e-65 | 211 |
| MS.gene97335.t1 | MTR_2g078610 | 37.462 | 331 | 167 | 6 | 8 | 300 | 74 | 402 | 1.55e-64 | 209 |
| MS.gene97335.t1 | MTR_1g090760 | 39.016 | 305 | 174 | 6 | 6 | 300 | 24 | 326 | 6.74e-64 | 205 |
| MS.gene97335.t1 | MTR_0286s0010 | 39.809 | 314 | 176 | 8 | 1 | 304 | 24 | 334 | 5.74e-62 | 200 |
| MS.gene97335.t1 | MTR_6g008075 | 39.809 | 314 | 176 | 8 | 1 | 304 | 24 | 334 | 5.74e-62 | 200 |
| MS.gene97335.t1 | MTR_6g043460 | 38.411 | 302 | 175 | 6 | 10 | 308 | 36 | 329 | 6.73e-62 | 200 |
| MS.gene97335.t1 | MTR_3g072210 | 52.381 | 189 | 86 | 3 | 118 | 304 | 52 | 238 | 5.21e-61 | 194 |
| MS.gene97335.t1 | MTR_7g029030 | 39.465 | 299 | 168 | 8 | 9 | 300 | 24 | 316 | 5.24e-61 | 197 |
| MS.gene97335.t1 | MTR_2g078280 | 39.130 | 322 | 154 | 8 | 8 | 290 | 74 | 392 | 1.71e-60 | 198 |
| MS.gene97335.t1 | MTR_6g043280 | 39.799 | 299 | 169 | 7 | 10 | 304 | 41 | 332 | 2.12e-60 | 196 |
| MS.gene97335.t1 | MTR_4g133800 | 39.073 | 302 | 166 | 7 | 11 | 304 | 42 | 333 | 2.48e-60 | 196 |
| MS.gene97335.t1 | MTR_2g008730 | 38.079 | 302 | 145 | 6 | 14 | 304 | 31 | 301 | 6.37e-60 | 194 |
| MS.gene97335.t1 | MTR_8g062780 | 38.312 | 308 | 179 | 6 | 6 | 304 | 19 | 324 | 9.28e-60 | 194 |
| MS.gene97335.t1 | MTR_5g074700 | 47.345 | 226 | 99 | 7 | 83 | 304 | 5 | 214 | 1.33e-59 | 190 |
| MS.gene97335.t1 | MTR_5g033470 | 37.662 | 308 | 176 | 7 | 10 | 304 | 73 | 377 | 5.73e-59 | 193 |
| MS.gene97335.t1 | MTR_4g095450 | 40.129 | 309 | 170 | 8 | 1 | 300 | 18 | 320 | 8.54e-59 | 191 |
| MS.gene97335.t1 | MTR_1g066710 | 35.082 | 305 | 186 | 7 | 8 | 305 | 25 | 324 | 1.23e-58 | 191 |
| MS.gene97335.t1 | MTR_5g016010 | 38.019 | 313 | 172 | 9 | 6 | 303 | 23 | 328 | 2.85e-57 | 187 |
| MS.gene97335.t1 | MTR_1g066380 | 34.653 | 303 | 190 | 6 | 8 | 305 | 25 | 324 | 3.25e-57 | 187 |
| MS.gene97335.t1 | MTR_4g087965 | 37.377 | 305 | 175 | 8 | 9 | 300 | 41 | 342 | 6.21e-57 | 187 |
| MS.gene97335.t1 | MTR_2g008160 | 36.246 | 309 | 182 | 6 | 6 | 304 | 20 | 323 | 1.43e-56 | 186 |
| MS.gene97335.t1 | MTR_1g009750 | 38.387 | 310 | 174 | 9 | 7 | 304 | 24 | 328 | 4.20e-56 | 184 |
| MS.gene97335.t1 | MTR_4g132490 | 34.211 | 304 | 188 | 5 | 9 | 304 | 28 | 327 | 5.35e-55 | 182 |
| MS.gene97335.t1 | MTR_2g067450 | 38.264 | 311 | 161 | 11 | 8 | 300 | 9 | 306 | 1.78e-54 | 180 |
| MS.gene97335.t1 | MTR_6g043240 | 36.455 | 299 | 179 | 7 | 10 | 305 | 42 | 332 | 2.96e-54 | 181 |
| MS.gene97335.t1 | MTR_2g099175 | 34.641 | 306 | 185 | 6 | 9 | 304 | 35 | 335 | 9.03e-54 | 179 |
| MS.gene97335.t1 | MTR_7g072490 | 45.614 | 228 | 68 | 4 | 56 | 283 | 2 | 173 | 1.63e-53 | 174 |
| MS.gene97335.t1 | MTR_1g066640 | 34.323 | 303 | 191 | 6 | 8 | 305 | 25 | 324 | 5.28e-53 | 176 |
| MS.gene97335.t1 | MTR_4g127670 | 36.842 | 304 | 173 | 8 | 9 | 300 | 23 | 319 | 7.73e-52 | 173 |
| MS.gene97335.t1 | MTR_1g066680 | 33.444 | 302 | 194 | 6 | 8 | 305 | 25 | 323 | 1.81e-51 | 172 |
| MS.gene97335.t1 | MTR_4g132110 | 36.304 | 303 | 179 | 8 | 10 | 304 | 32 | 328 | 1.50e-50 | 171 |
| MS.gene97335.t1 | MTR_3g105790 | 36.334 | 311 | 179 | 7 | 5 | 304 | 20 | 322 | 2.47e-49 | 167 |
| MS.gene97335.t1 | MTR_4g132110 | 35.714 | 308 | 179 | 9 | 10 | 304 | 32 | 333 | 1.41e-48 | 166 |
| MS.gene97335.t1 | MTR_0147s0010 | 33.754 | 317 | 169 | 7 | 10 | 300 | 77 | 378 | 5.42e-48 | 165 |
| MS.gene97335.t1 | MTR_3g072260 | 61.261 | 111 | 43 | 0 | 9 | 119 | 25 | 135 | 1.48e-44 | 149 |
| MS.gene97335.t1 | MTR_1g009750 | 35.484 | 310 | 166 | 9 | 7 | 304 | 24 | 311 | 2.33e-44 | 154 |
| MS.gene97335.t1 | MTR_2g008160 | 33.003 | 303 | 165 | 6 | 6 | 304 | 20 | 288 | 2.90e-44 | 153 |
| MS.gene97335.t1 | MTR_1g066380 | 34.630 | 257 | 160 | 6 | 54 | 305 | 3 | 256 | 4.13e-44 | 151 |
| MS.gene97335.t1 | MTR_2g008160 | 42.938 | 177 | 98 | 2 | 6 | 182 | 20 | 193 | 1.80e-42 | 145 |
| MS.gene97335.t1 | MTR_2g029880 | 39.801 | 201 | 100 | 5 | 116 | 307 | 3 | 191 | 6.98e-35 | 126 |
| MS.gene97335.t1 | MTR_3g105790 | 35.146 | 239 | 140 | 5 | 77 | 304 | 12 | 246 | 2.04e-31 | 118 |
| MS.gene97335.t1 | MTR_2g078560 | 33.632 | 223 | 109 | 7 | 121 | 305 | 101 | 322 | 6.30e-26 | 105 |
| MS.gene97335.t1 | MTR_2g077980 | 29.617 | 287 | 147 | 10 | 62 | 300 | 1 | 280 | 8.17e-26 | 104 |
| MS.gene97335.t1 | MTR_7g086790 | 39.474 | 152 | 80 | 4 | 57 | 208 | 17 | 156 | 5.65e-23 | 94.4 |
| MS.gene97335.t1 | MTR_1g089005 | 46.018 | 113 | 54 | 2 | 10 | 116 | 15 | 126 | 2.01e-22 | 91.7 |
| MS.gene97335.t1 | MTR_3g462850 | 36.111 | 144 | 79 | 6 | 173 | 305 | 9 | 150 | 3.30e-22 | 90.9 |
| MS.gene97335.t1 | MTR_5g058120 | 37.952 | 166 | 89 | 5 | 145 | 308 | 7 | 160 | 3.85e-22 | 93.6 |
| MS.gene97335.t1 | MTR_6g048160 | 60.870 | 69 | 23 | 2 | 49 | 117 | 22 | 86 | 1.92e-21 | 87.0 |
| MS.gene97335.t1 | MTR_4g114220 | 46.296 | 108 | 45 | 3 | 44 | 148 | 37 | 134 | 1.15e-20 | 86.7 |
| MS.gene97335.t1 | MTR_4g031040 | 32.143 | 168 | 74 | 4 | 71 | 237 | 3 | 131 | 3.37e-18 | 79.7 |
| MS.gene97335.t1 | MTR_2g029930 | 39.216 | 102 | 34 | 3 | 6 | 93 | 15 | 102 | 7.59e-17 | 75.1 |
| MS.gene97335.t1 | MTR_5g074770 | 40.217 | 92 | 51 | 2 | 213 | 303 | 20 | 108 | 9.72e-17 | 75.1 |
| MS.gene97335.t1 | MTR_7g086810 | 33.333 | 120 | 54 | 1 | 8 | 127 | 4 | 97 | 1.46e-15 | 75.1 |
| MS.gene97335.t1 | MTR_3g086710 | 44.737 | 76 | 39 | 1 | 2 | 77 | 11 | 83 | 2.08e-13 | 65.5 |
| MS.gene97335.t1 | MTR_3g107060 | 34.507 | 142 | 80 | 4 | 42 | 179 | 106 | 238 | 6.48e-13 | 68.6 |
| MS.gene97335.t1 | MTR_6g071110 | 29.586 | 169 | 91 | 7 | 14 | 167 | 4 | 159 | 1.52e-12 | 65.1 |
| MS.gene97335.t1 | MTR_4g012865 | 41.176 | 68 | 40 | 0 | 10 | 77 | 77 | 144 | 2.23e-12 | 64.3 |
| MS.gene97335.t1 | MTR_1g098320 | 38.554 | 83 | 50 | 1 | 227 | 309 | 48 | 129 | 4.33e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97335.t1 | AT5G05340 | 56.333 | 300 | 125 | 4 | 8 | 304 | 28 | 324 | 4.34e-116 | 338 |
| MS.gene97335.t1 | AT5G58400 | 52.459 | 305 | 138 | 4 | 1 | 301 | 21 | 322 | 2.86e-106 | 313 |
| MS.gene97335.t1 | AT1G14550 | 50.333 | 300 | 144 | 3 | 8 | 304 | 24 | 321 | 1.15e-101 | 301 |
| MS.gene97335.t1 | AT5G58390 | 50.825 | 303 | 146 | 2 | 1 | 301 | 12 | 313 | 3.46e-99 | 295 |
| MS.gene97335.t1 | AT4G36430 | 45.098 | 306 | 158 | 3 | 8 | 305 | 28 | 331 | 6.52e-95 | 284 |
| MS.gene97335.t1 | AT2G18150 | 46.488 | 299 | 150 | 3 | 14 | 304 | 40 | 336 | 7.98e-95 | 284 |
| MS.gene97335.t1 | AT1G14540 | 46.844 | 301 | 156 | 3 | 6 | 304 | 17 | 315 | 3.96e-94 | 281 |
| MS.gene97335.t1 | AT5G06720 | 47.403 | 308 | 151 | 5 | 6 | 304 | 28 | 333 | 1.06e-93 | 281 |
| MS.gene97335.t1 | AT5G06730 | 46.835 | 316 | 157 | 5 | 6 | 312 | 29 | 342 | 1.14e-93 | 282 |
| MS.gene97335.t1 | AT1G44970 | 47.436 | 312 | 153 | 4 | 2 | 304 | 37 | 346 | 6.90e-93 | 280 |
| MS.gene97335.t1 | AT2G18140 | 45.545 | 303 | 155 | 3 | 10 | 304 | 35 | 335 | 2.28e-92 | 278 |
| MS.gene97335.t1 | AT5G19890 | 45.541 | 314 | 154 | 5 | 1 | 304 | 21 | 327 | 8.49e-90 | 271 |
| MS.gene97335.t1 | AT3G50990 | 46.557 | 305 | 153 | 4 | 8 | 304 | 39 | 341 | 2.34e-89 | 270 |
| MS.gene97335.t1 | AT5G66390 | 46.205 | 303 | 153 | 3 | 10 | 304 | 33 | 333 | 2.93e-89 | 270 |
| MS.gene97335.t1 | AT4G08770 | 46.006 | 313 | 156 | 5 | 6 | 307 | 20 | 330 | 1.24e-88 | 269 |
| MS.gene97335.t1 | AT2G38390 | 45.806 | 310 | 156 | 5 | 5 | 304 | 26 | 333 | 7.32e-88 | 267 |
| MS.gene97335.t1 | AT2G38380 | 46.452 | 310 | 154 | 5 | 5 | 304 | 26 | 333 | 3.93e-87 | 265 |
| MS.gene97335.t1 | AT1G49570 | 45.338 | 311 | 156 | 6 | 3 | 302 | 41 | 348 | 1.24e-85 | 261 |
| MS.gene97335.t1 | AT3G32980 | 45.048 | 313 | 159 | 6 | 6 | 307 | 27 | 337 | 1.72e-85 | 261 |
| MS.gene97335.t1 | AT2G35380 | 46.602 | 309 | 148 | 5 | 10 | 304 | 30 | 335 | 3.29e-85 | 259 |
| MS.gene97335.t1 | AT4G08780 | 44.089 | 313 | 162 | 5 | 6 | 307 | 20 | 330 | 9.47e-85 | 259 |
| MS.gene97335.t1 | AT3G49120 | 44.089 | 313 | 162 | 6 | 6 | 307 | 28 | 338 | 2.01e-83 | 256 |
| MS.gene97335.t1 | AT3G49110 | 44.089 | 313 | 162 | 6 | 6 | 307 | 29 | 339 | 1.52e-82 | 253 |
| MS.gene97335.t1 | AT4G16270 | 46.205 | 303 | 151 | 4 | 10 | 304 | 50 | 348 | 4.85e-82 | 252 |
| MS.gene97335.t1 | AT1G68850 | 41.558 | 308 | 165 | 6 | 10 | 304 | 30 | 335 | 1.40e-80 | 248 |
| MS.gene97335.t1 | AT2G22420 | 42.345 | 307 | 163 | 6 | 6 | 304 | 19 | 319 | 2.08e-78 | 242 |
| MS.gene97335.t1 | AT5G19880 | 42.188 | 320 | 163 | 7 | 1 | 304 | 16 | 329 | 2.21e-76 | 237 |
| MS.gene97335.t1 | AT4G33420 | 41.554 | 296 | 165 | 5 | 10 | 304 | 37 | 325 | 2.93e-76 | 236 |
| MS.gene97335.t1 | AT4G33420 | 41.554 | 296 | 165 | 5 | 10 | 304 | 84 | 372 | 1.26e-75 | 236 |
| MS.gene97335.t1 | AT3G03670 | 42.157 | 306 | 163 | 6 | 8 | 304 | 21 | 321 | 5.10e-75 | 233 |
| MS.gene97335.t1 | AT3G01190 | 43.590 | 312 | 149 | 8 | 7 | 304 | 23 | 321 | 4.39e-74 | 231 |
| MS.gene97335.t1 | AT5G15180 | 41.100 | 309 | 157 | 6 | 10 | 304 | 32 | 329 | 5.46e-74 | 231 |
| MS.gene97335.t1 | AT5G51890 | 40.000 | 310 | 166 | 8 | 6 | 304 | 22 | 322 | 1.73e-71 | 224 |
| MS.gene97335.t1 | AT1G05260 | 40.717 | 307 | 169 | 6 | 8 | 305 | 24 | 326 | 6.84e-71 | 223 |
| MS.gene97335.t1 | AT5G64120 | 41.414 | 297 | 161 | 5 | 14 | 304 | 39 | 328 | 4.36e-70 | 221 |
| MS.gene97335.t1 | AT4G11290 | 40.453 | 309 | 171 | 7 | 6 | 304 | 21 | 326 | 5.50e-70 | 220 |
| MS.gene97335.t1 | AT2G41480 | 39.748 | 317 | 171 | 8 | 1 | 304 | 19 | 328 | 1.87e-69 | 219 |
| MS.gene97335.t1 | AT5G40150 | 40.864 | 301 | 172 | 5 | 8 | 304 | 30 | 328 | 1.08e-68 | 217 |
| MS.gene97335.t1 | AT3G28200 | 41.333 | 300 | 171 | 5 | 8 | 304 | 19 | 316 | 1.48e-68 | 216 |
| MS.gene97335.t1 | AT5G42180 | 39.735 | 302 | 166 | 6 | 10 | 303 | 23 | 316 | 1.61e-68 | 216 |
| MS.gene97335.t1 | AT1G05240 | 38.907 | 311 | 163 | 8 | 10 | 304 | 26 | 325 | 2.55e-68 | 216 |
| MS.gene97335.t1 | AT1G05250 | 38.907 | 311 | 163 | 8 | 10 | 304 | 26 | 325 | 2.55e-68 | 216 |
| MS.gene97335.t1 | AT3G21770 | 39.550 | 311 | 173 | 7 | 1 | 300 | 18 | 324 | 6.37e-68 | 215 |
| MS.gene97335.t1 | AT1G71695 | 41.830 | 306 | 163 | 8 | 10 | 307 | 44 | 342 | 3.15e-66 | 212 |
| MS.gene97335.t1 | AT5G17820 | 39.474 | 304 | 165 | 7 | 8 | 304 | 22 | 313 | 3.84e-66 | 210 |
| MS.gene97335.t1 | AT4G33870 | 35.072 | 345 | 155 | 6 | 10 | 300 | 68 | 397 | 3.92e-65 | 210 |
| MS.gene97335.t1 | AT5G17820 | 39.474 | 304 | 165 | 7 | 8 | 304 | 75 | 366 | 7.72e-65 | 208 |
| MS.gene97335.t1 | AT4G26010 | 38.255 | 298 | 175 | 7 | 8 | 304 | 20 | 309 | 8.05e-65 | 206 |
| MS.gene97335.t1 | AT4G26010 | 38.255 | 298 | 175 | 7 | 8 | 304 | 48 | 337 | 1.93e-64 | 206 |
| MS.gene97335.t1 | AT2G39040 | 41.100 | 309 | 166 | 8 | 9 | 304 | 45 | 350 | 3.41e-63 | 204 |
| MS.gene97335.t1 | AT5G39580 | 40.268 | 298 | 164 | 6 | 14 | 304 | 29 | 319 | 3.55e-62 | 200 |
| MS.gene97335.t1 | AT1G77100 | 39.216 | 306 | 173 | 8 | 6 | 304 | 20 | 319 | 6.69e-62 | 199 |
| MS.gene97335.t1 | AT2G35380 | 46.154 | 247 | 116 | 5 | 72 | 304 | 4 | 247 | 7.58e-62 | 197 |
| MS.gene97335.t1 | AT5G14130 | 37.987 | 308 | 177 | 6 | 6 | 304 | 28 | 330 | 8.73e-62 | 199 |
| MS.gene97335.t1 | AT5G14130 | 37.987 | 308 | 177 | 6 | 6 | 304 | 69 | 371 | 2.33e-61 | 199 |
| MS.gene97335.t1 | AT5G64100 | 38.614 | 303 | 166 | 7 | 12 | 304 | 39 | 331 | 6.28e-61 | 197 |
| MS.gene97335.t1 | AT4G25980 | 37.097 | 310 | 175 | 8 | 8 | 304 | 24 | 326 | 7.47e-61 | 197 |
| MS.gene97335.t1 | AT1G30870 | 37.255 | 306 | 172 | 6 | 10 | 305 | 51 | 346 | 1.10e-60 | 197 |
| MS.gene97335.t1 | AT1G24110 | 39.274 | 303 | 170 | 7 | 8 | 300 | 20 | 318 | 1.13e-59 | 194 |
| MS.gene97335.t1 | AT1G34510 | 38.462 | 299 | 173 | 8 | 8 | 304 | 20 | 309 | 1.37e-59 | 193 |
| MS.gene97335.t1 | AT5G64110 | 39.344 | 305 | 159 | 8 | 14 | 304 | 38 | 330 | 1.29e-58 | 191 |
| MS.gene97335.t1 | AT2G18980 | 39.806 | 309 | 166 | 9 | 8 | 304 | 23 | 323 | 3.50e-58 | 190 |
| MS.gene97335.t1 | AT5G67400 | 37.785 | 307 | 175 | 7 | 6 | 300 | 23 | 325 | 8.58e-57 | 186 |
| MS.gene97335.t1 | AT2G24800 | 37.864 | 309 | 172 | 7 | 8 | 304 | 29 | 329 | 1.60e-56 | 186 |
| MS.gene97335.t1 | AT2G34060 | 38.636 | 308 | 167 | 10 | 9 | 300 | 41 | 342 | 8.58e-56 | 184 |
| MS.gene97335.t1 | AT4G31760 | 37.061 | 313 | 176 | 7 | 4 | 304 | 23 | 326 | 9.62e-56 | 184 |
| MS.gene97335.t1 | AT4G30170 | 37.299 | 311 | 175 | 8 | 6 | 304 | 23 | 325 | 1.16e-55 | 183 |
| MS.gene97335.t1 | AT4G37530 | 36.334 | 311 | 174 | 9 | 6 | 300 | 23 | 325 | 2.25e-55 | 183 |
| MS.gene97335.t1 | AT3G49960 | 39.297 | 313 | 162 | 12 | 6 | 300 | 23 | 325 | 2.76e-55 | 182 |
| MS.gene97335.t1 | AT4G37520 | 37.742 | 310 | 167 | 10 | 8 | 300 | 25 | 325 | 1.50e-54 | 181 |
| MS.gene97335.t1 | AT2G43480 | 35.065 | 308 | 182 | 7 | 9 | 304 | 34 | 335 | 5.63e-54 | 179 |
| MS.gene97335.t1 | AT5G47000 | 37.829 | 304 | 179 | 7 | 8 | 304 | 31 | 331 | 6.37e-54 | 179 |
| MS.gene97335.t1 | AT2G37130 | 35.974 | 303 | 183 | 7 | 9 | 304 | 29 | 327 | 8.31e-54 | 179 |
| MS.gene97335.t1 | AT2G37130 | 35.786 | 299 | 181 | 7 | 13 | 304 | 2 | 296 | 4.78e-53 | 176 |
| MS.gene97335.t1 | AT5G24070 | 35.556 | 315 | 185 | 8 | 3 | 305 | 28 | 336 | 8.33e-53 | 176 |
| MS.gene97335.t1 | AT4G37520 | 38.065 | 310 | 163 | 12 | 8 | 300 | 25 | 322 | 1.14e-52 | 176 |
| MS.gene97335.t1 | AT4G17690 | 37.000 | 300 | 178 | 8 | 10 | 302 | 26 | 321 | 3.70e-51 | 172 |
| MS.gene97335.t1 | AT4G37530 | 38.403 | 263 | 139 | 8 | 6 | 252 | 23 | 278 | 7.14e-51 | 170 |
| MS.gene97335.t1 | AT4G21960 | 36.039 | 308 | 183 | 8 | 6 | 304 | 25 | 327 | 9.23e-51 | 171 |
| MS.gene97335.t1 | AT3G17070 | 36.190 | 315 | 181 | 8 | 4 | 304 | 31 | 339 | 5.61e-50 | 169 |
| MS.gene97335.t1 | AT5G22410 | 33.010 | 309 | 190 | 8 | 3 | 301 | 21 | 322 | 8.23e-49 | 166 |
| MS.gene97335.t1 | AT4G25980 | 42.604 | 169 | 94 | 2 | 8 | 176 | 69 | 234 | 2.51e-41 | 145 |
| MS.gene97335.t1 | AT5G39580 | 43.169 | 183 | 96 | 3 | 14 | 196 | 29 | 203 | 1.75e-38 | 136 |
| MS.gene97335.t1 | AT2G24800 | 41.146 | 192 | 100 | 5 | 8 | 196 | 29 | 210 | 9.56e-37 | 132 |
| MS.gene97335.t1 | AT3G17070 | 34.962 | 266 | 153 | 8 | 52 | 304 | 18 | 276 | 4.16e-36 | 131 |
| MS.gene97335.t1 | AT3G42570 | 35.374 | 147 | 81 | 4 | 33 | 176 | 14 | 149 | 3.63e-16 | 74.7 |
| MS.gene97335.t1 | AT4G32320 | 26.909 | 275 | 132 | 11 | 26 | 283 | 97 | 319 | 1.89e-12 | 67.4 |
Find 58 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAATTGTACGAACAGCTTT+TGG | 0.248258 | 1.2:+85895714 | None:intergenic |
| CTATTAACTCAAAACCTCTT+AGG | 0.248467 | 1.2:+85895313 | None:intergenic |
| GAAGAAATGGTTACTTTATC+AGG | 0.253613 | 1.2:-85894958 | MS.gene97335:intron |
| CACTCTGATCAACAACTATT+TGG | 0.263540 | 1.2:-85894074 | MS.gene97335:CDS |
| TTCGGCTGTGAAACCTTTCT+TGG | 0.264682 | 1.2:+85894978 | None:intergenic |
| AAGGCCATCAAGATTCAAAA+AGG | 0.295453 | 1.2:+85895014 | None:intergenic |
| CCTCTTAGGGAGTTTCTGTT+TGG | 0.303669 | 1.2:+85895327 | None:intergenic |
| TACAATTAGGAAAGCAGTTC+AGG | 0.312689 | 1.2:-85895700 | MS.gene97335:CDS |
| TCTTGGCGAAAGCAGTAATA+AGG | 0.313799 | 1.2:+85894995 | None:intergenic |
| CAAAAGCTGTTCGTACAATT+AGG | 0.330721 | 1.2:-85895713 | MS.gene97335:CDS |
| GAGTTATCAGCTAATTTCTA+TGG | 0.342682 | 1.2:-85895747 | MS.gene97335:CDS |
| CTATTAATTACATGTATGAT+TGG | 0.345529 | 1.2:-85895786 | None:intergenic |
| TGATCAGGTGCTCACACAAT+AGG | 0.350317 | 1.2:-85894296 | MS.gene97335:intron |
| TCTTCTTACTTGAGCGTTTG+TGG | 0.357638 | 1.2:+85894040 | None:intergenic |
| CCAAAACTTGTTGAAAAGTA+AGG | 0.368077 | 1.2:-85894105 | MS.gene97335:CDS |
| CAAAGATGGAATGTACTATT+AGG | 0.369687 | 1.2:-85895090 | MS.gene97335:CDS |
| TAAGCAGTGGTAGTGTTTGA+TGG | 0.370648 | 1.2:+85893894 | None:intergenic |
| TCAATGCTTAGTCCACTTAC+TGG | 0.377441 | 1.2:-85893960 | MS.gene97335:CDS |
| CTCTTAGGGAGTTTCTGTTT+GGG | 0.395263 | 1.2:+85895328 | None:intergenic |
| TGATAAAGTAACCATTTCTT+CGG | 0.412644 | 1.2:+85894960 | None:intergenic |
| ACATCTTAGCCCTTGCTGCT+AGG | 0.420580 | 1.2:-85895236 | MS.gene97335:CDS |
| AGATGACATCAAATCTCAAT+TGG | 0.429687 | 1.2:-85895292 | MS.gene97335:CDS |
| AGGTTTCACAGCCGAAGAAA+TGG | 0.443774 | 1.2:-85894971 | MS.gene97335:CDS |
| ATTACTGCTTTCGCCAAGAA+AGG | 0.453887 | 1.2:-85894991 | MS.gene97335:CDS |
| TATTAACTCAAAACCTCTTA+GGG | 0.455742 | 1.2:+85895314 | None:intergenic |
| CCAAACAGAAACTCCCTAAG+AGG | 0.456441 | 1.2:-85895327 | MS.gene97335:CDS |
| AGTCCACTTACTGGCATTGA+AGG | 0.460678 | 1.2:-85893951 | MS.gene97335:CDS |
| TCACCTTCAATGCCAGTAAG+TGG | 0.469881 | 1.2:+85893948 | None:intergenic |
| CATCTTAGCCCTTGCTGCTA+GGG | 0.473688 | 1.2:-85895235 | MS.gene97335:CDS |
| TCAGAACAAGAGACAGTATT+GGG | 0.477115 | 1.2:+85895258 | None:intergenic |
| GAACAAAGCAGTCATGGAAA+TGG | 0.478577 | 1.2:+85895631 | None:intergenic |
| CTGGCATTGAAGGTGAAATC+AGG | 0.481698 | 1.2:-85893941 | MS.gene97335:CDS |
| GATCAACAACTATTTGGTAA+TGG | 0.497432 | 1.2:-85894068 | MS.gene97335:CDS |
| AGAAGATATAGCAGAAGCAT+GGG | 0.506186 | 1.2:-85894023 | MS.gene97335:CDS |
| TTGATGGAGCATTGACGAAA+TGG | 0.506430 | 1.2:+85893910 | None:intergenic |
| TATTAATTACATGTATGATT+GGG | 0.510374 | 1.2:-85895785 | None:intergenic |
| TTACTTGAACAAAGCAGTCA+TGG | 0.513127 | 1.2:+85895625 | None:intergenic |
| AAGAAGATATAGCAGAAGCA+TGG | 0.514686 | 1.2:-85894024 | MS.gene97335:CDS |
| TATAGCTTGGTGGACAAAGA+TGG | 0.515315 | 1.2:-85895104 | MS.gene97335:intron |
| GATCAGGTGCTCACACAATA+GGG | 0.525526 | 1.2:-85894295 | MS.gene97335:intron |
| GACGACACGTCAAATTTCAC+AGG | 0.539661 | 1.2:-85895366 | MS.gene97335:CDS |
| CGTGGTGTCGAGGAGTCAAA+AGG | 0.540660 | 1.2:+85894155 | None:intergenic |
| TTAAATGATGTATAGCTTGG+TGG | 0.556581 | 1.2:-85895114 | MS.gene97335:intron |
| CAAAACTTGTTGAAAAGTAA+GGG | 0.557870 | 1.2:-85894104 | MS.gene97335:CDS |
| AACACCGTCCCTAGCAGCAA+GGG | 0.564518 | 1.2:+85895227 | None:intergenic |
| GTCAGAACAAGAGACAGTAT+TGG | 0.568320 | 1.2:+85895257 | None:intergenic |
| TTAGCCCTTGCTGCTAGGGA+CGG | 0.572382 | 1.2:-85895231 | MS.gene97335:CDS |
| CAACACCGTCCCTAGCAGCA+AGG | 0.585697 | 1.2:+85895226 | None:intergenic |
| TGCTAGGGACGGTGTTGCCG+AGG | 0.586695 | 1.2:-85895220 | MS.gene97335:intron |
| ATCATGAGGACGTGGTGTCG+AGG | 0.586699 | 1.2:+85894145 | None:intergenic |
| TGACATCAAATCTCAATTGG+AGG | 0.589015 | 1.2:-85895289 | MS.gene97335:CDS |
| GATTAATTTAATTTAAGCAG+TGG | 0.594474 | 1.2:+85893881 | None:intergenic |
| TGTTAAGAATGAGAGTCGCA+TGG | 0.618020 | 1.2:-85895673 | MS.gene97335:CDS |
| CTCACACAATAGGGCTAGTG+AGG | 0.619880 | 1.2:-85894286 | MS.gene97335:CDS |
| ATGGAAATGGAGTCTAAGCA+AGG | 0.625587 | 1.2:+85895644 | None:intergenic |
| GTTAAGAATGAGAGTCGCAT+GGG | 0.627549 | 1.2:-85895672 | MS.gene97335:CDS |
| TTATCAAAATCATGAGGACG+TGG | 0.652723 | 1.2:+85894137 | None:intergenic |
| TAACCATTATCAAAATCATG+AGG | 0.665603 | 1.2:+85894131 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCAAATTACATTAATTAT+CGG | - | chr1.2:85894751-85894770 | MS.gene97335:intron | 15.0% |
| !!! | AATAGTATATAACATTTTGA+TGG | - | chr1.2:85895338-85895357 | MS.gene97335:CDS | 15.0% |
| !!! | ATATACTATTAATGACATTT+TGG | + | chr1.2:85895328-85895347 | None:intergenic | 15.0% |
| !! | ATCAATTAATATTGAACGAA+GGG | - | chr1.2:85895000-85895019 | MS.gene97335:CDS | 20.0% |
| !! | CGATAATTAATGTAATTTGA+TGG | + | chr1.2:85894753-85894772 | None:intergenic | 20.0% |
| !! | GTTGTTTGATTAAGATAAAA+TGG | + | chr1.2:85895147-85895166 | None:intergenic | 20.0% |
| !! | TAATGTATATATACTTACCT+CGG | + | chr1.2:85894464-85894483 | None:intergenic | 20.0% |
| !! | TATCAATTAATATTGAACGA+AGG | - | chr1.2:85894999-85895018 | MS.gene97335:CDS | 20.0% |
| ! | AGATTAAATGATGTATAGCT+TGG | - | chr1.2:85894547-85894566 | MS.gene97335:intron | 25.0% |
| ! | TAACCATTATCAAAATCATG+AGG | + | chr1.2:85895536-85895555 | None:intergenic | 25.0% |
| ! | TAATTTGATGGAGTAATCAA+GGG | + | chr1.2:85894741-85894760 | None:intergenic | 25.0% |
| ! | TATTAACTCAAAACCTCTTA+GGG | + | chr1.2:85894353-85894372 | None:intergenic | 25.0% |
| ! | TCAATTAATATTGAACGAAG+GGG | - | chr1.2:85895001-85895020 | MS.gene97335:CDS | 25.0% |
| ! | TGATAAAGTAACCATTTCTT+CGG | + | chr1.2:85894707-85894726 | None:intergenic | 25.0% |
| !!! | CAAAACTTGTTGAAAAGTAA+GGG | - | chr1.2:85895560-85895579 | MS.gene97335:intron | 25.0% |
| AGATGACATCAAATCTCAAT+TGG | - | chr1.2:85894372-85894391 | MS.gene97335:intron | 30.0% | |
| AGGTGTCAATTAATATGAGA+AGG | + | chr1.2:85894799-85894818 | None:intergenic | 30.0% | |
| CAAAGATGGAATGTACTATT+AGG | - | chr1.2:85894574-85894593 | MS.gene97335:intron | 30.0% | |
| CTATTAACTCAAAACCTCTT+AGG | + | chr1.2:85894354-85894373 | None:intergenic | 30.0% | |
| GAGTTATCAGCTAATTTCTA+TGG | - | chr1.2:85893917-85893936 | MS.gene97335:CDS | 30.0% | |
| GATCAACAACTATTTGGTAA+TGG | - | chr1.2:85895596-85895615 | MS.gene97335:intron | 30.0% | |
| GCATGAAGTTATATGCATTT+AGG | + | chr1.2:85895183-85895202 | None:intergenic | 30.0% | |
| GCATTATTTCAATAAGACAG+TGG | - | chr1.2:85895039-85895058 | MS.gene97335:CDS | 30.0% | |
| GTAATTTGATGGAGTAATCA+AGG | + | chr1.2:85894742-85894761 | None:intergenic | 30.0% | |
| GTACAATATACATACATGCA+GGG | - | chr1.2:85894253-85894272 | MS.gene97335:CDS | 30.0% | |
| TAAATGTGATCACATGTACA+TGG | - | chr1.2:85895290-85895309 | MS.gene97335:CDS | 30.0% | |
| TGAATAATGCATGTAGTCAA+AGG | + | chr1.2:85894819-85894838 | None:intergenic | 30.0% | |
| TGTACAATATACATACATGC+AGG | - | chr1.2:85894252-85894271 | MS.gene97335:CDS | 30.0% | |
| TTAAATGATGTATAGCTTGG+TGG | - | chr1.2:85894550-85894569 | MS.gene97335:intron | 30.0% | |
| ! | GAAGAAATGGTTACTTTATC+AGG | - | chr1.2:85894706-85894725 | MS.gene97335:intron | 30.0% |
| !! | CCAAAACTTGTTGAAAAGTA+AGG | - | chr1.2:85895559-85895578 | MS.gene97335:intron | 30.0% |
| !! | CCTTACTTTTCAACAAGTTT+TGG | + | chr1.2:85895562-85895581 | None:intergenic | 30.0% |
| !!! | TTTGATGGTTTTGTTTGATC+AGG | - | chr1.2:85895353-85895372 | MS.gene97335:CDS | 30.0% |
| AAGAAGATATAGCAGAAGCA+TGG | - | chr1.2:85895640-85895659 | MS.gene97335:CDS | 35.0% | |
| AAGGCCATCAAGATTCAAAA+AGG | + | chr1.2:85894653-85894672 | None:intergenic | 35.0% | |
| AGGCCATCAAGATTCAAAAA+GGG | + | chr1.2:85894652-85894671 | None:intergenic | 35.0% | |
| CAAAAGCTGTTCGTACAATT+AGG | - | chr1.2:85893951-85893970 | MS.gene97335:CDS | 35.0% | |
| CACTCTGATCAACAACTATT+TGG | - | chr1.2:85895590-85895609 | MS.gene97335:intron | 35.0% | |
| CTGATAATCTGAATTACGAG+TGG | + | chr1.2:85894170-85894189 | None:intergenic | 35.0% | |
| TACAATTAGGAAAGCAGTTC+AGG | - | chr1.2:85893964-85893983 | MS.gene97335:CDS | 35.0% | |
| TCAGAACAAGAGACAGTATT+GGG | + | chr1.2:85894409-85894428 | None:intergenic | 35.0% | |
| TGACATCAAATCTCAATTGG+AGG | - | chr1.2:85894375-85894394 | MS.gene97335:intron | 35.0% | |
| TTACTTGAACAAAGCAGTCA+TGG | + | chr1.2:85894042-85894061 | None:intergenic | 35.0% | |
| TTATCAAAATCATGAGGACG+TGG | + | chr1.2:85895530-85895549 | None:intergenic | 35.0% | |
| ! | AGAAGATATAGCAGAAGCAT+GGG | - | chr1.2:85895641-85895660 | MS.gene97335:CDS | 35.0% |
| ! | CTAATTGTACGAACAGCTTT+TGG | + | chr1.2:85893953-85893972 | None:intergenic | 35.0% |
| ! | GATTATCAGTCTTTTTCCCT+CGG | - | chr1.2:85894181-85894200 | MS.gene97335:CDS | 35.0% |
| ! | GTGTTTGACTTTCATACATG+TGG | + | chr1.2:85895208-85895227 | None:intergenic | 35.0% |
| !! | CGTCCTCATGATTTTGATAA+TGG | - | chr1.2:85895530-85895549 | MS.gene97335:intron | 35.0% |
| ATGGAAATGGAGTCTAAGCA+AGG | + | chr1.2:85894023-85894042 | None:intergenic | 40.0% | |
| ATTACTGCTTTCGCCAAGAA+AGG | - | chr1.2:85894673-85894692 | MS.gene97335:intron | 40.0% | |
| CTCTTAGGGAGTTTCTGTTT+GGG | + | chr1.2:85894339-85894358 | None:intergenic | 40.0% | |
| GAACAAAGCAGTCATGGAAA+TGG | + | chr1.2:85894036-85894055 | None:intergenic | 40.0% | |
| GCATTTAGGTGACACATCTA+TGG | + | chr1.2:85895169-85895188 | None:intergenic | 40.0% | |
| GTCAGAACAAGAGACAGTAT+TGG | + | chr1.2:85894410-85894429 | None:intergenic | 40.0% | |
| GTTAAGAATGAGAGTCGCAT+GGG | - | chr1.2:85893992-85894011 | MS.gene97335:CDS | 40.0% | |
| TCAAGATTCAAAAAGGGAGC+AGG | + | chr1.2:85894646-85894665 | None:intergenic | 40.0% | |
| TCAATGCTTAGTCCACTTAC+TGG | - | chr1.2:85895704-85895723 | MS.gene97335:CDS | 40.0% | |
| TCACATGTACATGGTCGTAT+TGG | - | chr1.2:85895299-85895318 | MS.gene97335:CDS | 40.0% | |
| TCTTCTTACTTGAGCGTTTG+TGG | + | chr1.2:85895627-85895646 | None:intergenic | 40.0% | |
| TCTTGGCGAAAGCAGTAATA+AGG | + | chr1.2:85894672-85894691 | None:intergenic | 40.0% | |
| TGTTAAGAATGAGAGTCGCA+TGG | - | chr1.2:85893991-85894010 | MS.gene97335:CDS | 40.0% | |
| ! | GCTCCCTTTTTGAATCTTGA+TGG | - | chr1.2:85894646-85894665 | MS.gene97335:intron | 40.0% |
| ! | TAAGCAGTGGTAGTGTTTGA+TGG | + | chr1.2:85895773-85895792 | None:intergenic | 40.0% |
| ! | TATAGCTTGGTGGACAAAGA+TGG | - | chr1.2:85894560-85894579 | MS.gene97335:intron | 40.0% |
| ! | TGCATTTTTGCAGCAAATGC+TGG | + | chr1.2:85895449-85895468 | None:intergenic | 40.0% |
| !! | TTGATGGAGCATTGACGAAA+TGG | + | chr1.2:85895757-85895776 | None:intergenic | 40.0% |
| AGGTTTCACAGCCGAAGAAA+TGG | - | chr1.2:85894693-85894712 | MS.gene97335:intron | 45.0% | |
| CCAAACAGAAACTCCCTAAG+AGG | - | chr1.2:85894337-85894356 | MS.gene97335:intron | 45.0% | |
| CCTCTTAGGGAGTTTCTGTT+TGG | + | chr1.2:85894340-85894359 | None:intergenic | 45.0% | |
| GACGACACGTCAAATTTCAC+AGG | - | chr1.2:85894298-85894317 | MS.gene97335:intron | 45.0% | |
| GATCAGGTGCTCACACAATA+GGG | - | chr1.2:85895369-85895388 | MS.gene97335:CDS | 45.0% | |
| TCACCTTCAATGCCAGTAAG+TGG | + | chr1.2:85895719-85895738 | None:intergenic | 45.0% | |
| TGATCAGGTGCTCACACAAT+AGG | - | chr1.2:85895368-85895387 | MS.gene97335:CDS | 45.0% | |
| TGTCATCACCCCCTTCAAAA+GGG | + | chr1.2:85895481-85895500 | None:intergenic | 45.0% | |
| TTCGGCTGTGAAACCTTTCT+TGG | + | chr1.2:85894689-85894708 | None:intergenic | 45.0% | |
| TTGTCATCACCCCCTTCAAA+AGG | + | chr1.2:85895482-85895501 | None:intergenic | 45.0% | |
| ! | AGTCCACTTACTGGCATTGA+AGG | - | chr1.2:85895713-85895732 | MS.gene97335:CDS | 45.0% |
| ! | CTGGCATTGAAGGTGAAATC+AGG | - | chr1.2:85895723-85895742 | MS.gene97335:CDS | 45.0% |
| !! | AAGCAGAGTGCCCTTTTGAA+GGG | - | chr1.2:85895468-85895487 | MS.gene97335:intron | 45.0% |
| !! | GGTGCAGATTTTTCAGAGCA+AGG | - | chr1.2:85895399-85895418 | MS.gene97335:intron | 45.0% |
| !! | TTTTCCCTCGGATTCGAGTT+AGG | - | chr1.2:85894193-85894212 | MS.gene97335:CDS | 45.0% |
| ACACCAAACACGACACATCG+AGG | - | chr1.2:85895224-85895243 | MS.gene97335:CDS | 50.0% | |
| ACATCTTAGCCCTTGCTGCT+AGG | - | chr1.2:85894428-85894447 | MS.gene97335:intron | 50.0% | |
| ATGCCTCGATGTGTCGTGTT+TGG | + | chr1.2:85895230-85895249 | None:intergenic | 50.0% | |
| CATCTTAGCCCTTGCTGCTA+GGG | - | chr1.2:85894429-85894448 | MS.gene97335:intron | 50.0% | |
| GTCTCCTAACTCGAATCCGA+GGG | + | chr1.2:85894200-85894219 | None:intergenic | 50.0% | |
| TGTCTCCTAACTCGAATCCG+AGG | + | chr1.2:85894201-85894220 | None:intergenic | 50.0% | |
| ! | CTCACACAATAGGGCTAGTG+AGG | - | chr1.2:85895378-85895397 | MS.gene97335:CDS | 50.0% |
| !! | AGCAGAGTGCCCTTTTGAAG+GGG | - | chr1.2:85895469-85895488 | MS.gene97335:intron | 50.0% |
| !! | CAAGCAGAGTGCCCTTTTGA+AGG | - | chr1.2:85895467-85895486 | MS.gene97335:intron | 50.0% |
| AACACCGTCCCTAGCAGCAA+GGG | + | chr1.2:85894440-85894459 | None:intergenic | 55.0% | |
| TTAGCCCTTGCTGCTAGGGA+CGG | - | chr1.2:85894433-85894452 | MS.gene97335:intron | 55.0% | |
| ! | ATCATGAGGACGTGGTGTCG+AGG | + | chr1.2:85895522-85895541 | None:intergenic | 55.0% |
| ! | CGTGGTGTCGAGGAGTCAAA+AGG | + | chr1.2:85895512-85895531 | None:intergenic | 55.0% |
| !! | GCAGAGTGCCCTTTTGAAGG+GGG | - | chr1.2:85895470-85895489 | MS.gene97335:intron | 55.0% |
| CAACACCGTCCCTAGCAGCA+AGG | + | chr1.2:85894441-85894460 | None:intergenic | 60.0% | |
| !! | TGCTAGGGACGGTGTTGCCG+AGG | - | chr1.2:85894444-85894463 | MS.gene97335:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 85893893 | 85895793 | 85893893 | ID=MS.gene97335 |
| chr1.2 | mRNA | 85893893 | 85895793 | 85893893 | ID=MS.gene97335.t1;Parent=MS.gene97335 |
| chr1.2 | exon | 85895629 | 85895793 | 85895629 | ID=MS.gene97335.t1.exon1;Parent=MS.gene97335.t1 |
| chr1.2 | CDS | 85895629 | 85895793 | 85895629 | ID=cds.MS.gene97335.t1;Parent=MS.gene97335.t1 |
| chr1.2 | exon | 85895221 | 85895412 | 85895221 | ID=MS.gene97335.t1.exon2;Parent=MS.gene97335.t1 |
| chr1.2 | CDS | 85895221 | 85895412 | 85895221 | ID=cds.MS.gene97335.t1;Parent=MS.gene97335.t1 |
| chr1.2 | exon | 85894959 | 85895121 | 85894959 | ID=MS.gene97335.t1.exon3;Parent=MS.gene97335.t1 |
| chr1.2 | CDS | 85894959 | 85895121 | 85894959 | ID=cds.MS.gene97335.t1;Parent=MS.gene97335.t1 |
| chr1.2 | exon | 85893893 | 85894311 | 85893893 | ID=MS.gene97335.t1.exon4;Parent=MS.gene97335.t1 |
| chr1.2 | CDS | 85893893 | 85894311 | 85893893 | ID=cds.MS.gene97335.t1;Parent=MS.gene97335.t1 |
| Gene Sequence |
| Protein sequence |
