Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012472.01.T01 | XP_013449092.1 | 95.898 | 512 | 11 | 6 | 1 | 509 | 1 | 505 | 0 | 972 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012472.01.T01 | Q9SS80 | 50.928 | 485 | 166 | 15 | 30 | 468 | 25 | 483 | 2.67E-117 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012472.01.T01 | A0A072U007 | 95.898 | 512 | 11 | 6 | 1 | 509 | 1 | 505 | 0.0 | 972 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048701.01 | MsG0380012472.01 | 0.826488 | 2.638658e-54 | 2.478028e-51 |
| MsG0180000076.01 | MsG0380012472.01 | 0.833802 | 4.325700e-56 | 5.036574e-53 |
| MsG0180000373.01 | MsG0380012472.01 | 0.805899 | 1.068040e-49 | 5.717971e-47 |
| MsG0180003427.01 | MsG0380012472.01 | 0.818086 | 2.355418e-52 | 1.745964e-49 |
| MsG0180004126.01 | MsG0380012472.01 | 0.839922 | 1.185774e-57 | 1.662279e-54 |
| MsG0180005835.01 | MsG0380012472.01 | 0.867604 | 1.210514e-65 | 4.251233e-62 |
| MsG0280006310.01 | MsG0380012472.01 | 0.824522 | 7.713322e-54 | 6.848773e-51 |
| MsG0280010868.01 | MsG0380012472.01 | 0.809064 | 2.276047e-50 | 1.323044e-47 |
| MsG0380012472.01 | MsG0380013636.01 | 0.825278 | 5.115374e-54 | 4.641478e-51 |
| MsG0380012472.01 | MsG0380014754.01 | 0.804253 | 2.360985e-49 | 1.211483e-46 |
| MsG0380012472.01 | MsG0380015161.01 | 0.811273 | 7.603196e-51 | 4.685794e-48 |
| MsG0380012472.01 | MsG0380017091.01 | 0.802924 | 4.452929e-49 | 2.208448e-46 |
| MsG0380012472.01 | MsG0380017997.01 | 0.807016 | 6.210155e-50 | 3.421179e-47 |
| MsG0380012472.01 | MsG0380018007.01 | 0.809326 | 2.000034e-50 | 1.170792e-47 |
| MsG0380012472.01 | MsG0480019588.01 | 0.842330 | 2.762290e-58 | 4.174126e-55 |
| MsG0380012472.01 | MsG0480019635.01 | 0.830429 | 2.952138e-55 | 3.109436e-52 |
| MsG0380012472.01 | MsG0480020263.01 | 0.812488 | 4.134432e-51 | 2.632331e-48 |
| MsG0380012472.01 | MsG0480021156.01 | 0.829072 | 6.317232e-55 | 6.395898e-52 |
| MsG0380012472.01 | MsG0480022320.01 | 0.805888 | 1.073884e-49 | 5.747569e-47 |
| MsG0380012472.01 | MsG0480023324.01 | 0.850455 | 1.679919e-60 | 3.292495e-57 |
| MsG0380012472.01 | MsG0480023897.01 | 0.807716 | 4.411960e-50 | 2.475223e-47 |
| MsG0380012472.01 | MsG0480024002.01 | 0.821981 | 3.023890e-53 | 2.498087e-50 |
| MsG0380012472.01 | MsG0580024478.01 | 0.824723 | 6.917197e-54 | 6.178201e-51 |
| MsG0380012472.01 | MsG0580024887.01 | 0.842216 | 2.960365e-58 | 4.457111e-55 |
| MsG0380012472.01 | MsG0580024954.01 | 0.803650 | 3.150273e-49 | 1.591693e-46 |
| MsG0380012472.01 | MsG0580025385.01 | 0.847122 | 1.411841e-59 | 2.484438e-56 |
| MsG0380012472.01 | MsG0580025464.01 | 0.845786 | 3.267833e-59 | 5.508080e-56 |
| MsG0380012472.01 | MsG0580025515.01 | 0.817164 | 3.800503e-52 | 2.747028e-49 |
| MsG0380012472.01 | MsG0580028328.01 | 0.814792 | 1.286181e-51 | 8.712931e-49 |
| MsG0380012472.01 | MsG0780038945.01 | 0.801132 | 1.040212e-48 | 4.929659e-46 |
| MsG0380012472.01 | MsG0780039578.01 | 0.823311 | 1.483028e-53 | 1.272326e-50 |
| MsG0380012472.01 | MsG0780040364.01 | 0.820083 | 8.273069e-53 | 6.482587e-50 |
| MsG0380012472.01 | MsG0780040460.01 | 0.804234 | 2.382128e-49 | 1.221748e-46 |
| MsG0380012472.01 | MsG0780040564.01 | 0.804644 | 1.956340e-49 | 1.014071e-46 |
| MsG0380012472.01 | MsG0780040600.01 | 0.843596 | 1.271714e-58 | 1.999737e-55 |
| MsG0380012472.01 | MsG0780041463.01 | 0.819112 | 1.378137e-52 | 1.050965e-49 |
| MsG0380012472.01 | MsG0780041756.01 | 0.805236 | 1.471285e-49 | 7.743570e-47 |
| MsG0380012472.01 | MsG0880041837.01 | 0.800396 | 1.469884e-48 | 6.836918e-46 |
| MsG0380012472.01 | MsG0880042046.01 | 0.816332 | 5.840013e-52 | 4.126385e-49 |
| MsG0380012472.01 | MsG0880042906.01 | 0.815806 | 7.655814e-52 | 5.331796e-49 |
| MsG0380012472.01 | MsG0880042929.01 | 0.824483 | 7.875678e-54 | 6.984948e-51 |
| MsG0380012472.01 | MsG0880045900.01 | 0.827509 | 1.504651e-54 | 1.455545e-51 |
| MsG0380012472.01 | MsG0880045989.01 | 0.828464 | 8.861958e-55 | 8.815258e-52 |
| MsG0380012472.01 | MsG0880046431.01 | 0.813445 | 2.550897e-51 | 1.666231e-48 |
| MsG0380012472.01 | MsG0880047223.01 | 0.830875 | 2.295819e-55 | 2.450108e-52 |
| MsG0380012472.01 | MsG0880047431.01 | 0.846582 | 1.984191e-59 | 3.431174e-56 |
| MsG0280007419.01 | MsG0380012472.01 | 0.806919 | 6.510526e-50 | 3.577664e-47 |
| MsG0280008280.01 | MsG0380012472.01 | 0.801076 | 1.067639e-48 | 5.052622e-46 |
| MsG0280008407.01 | MsG0380012472.01 | 0.807200 | 5.677726e-50 | 3.142872e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012472.01.T01 | MTR_7g066730 | 95.898 | 512 | 11 | 6 | 1 | 509 | 1 | 505 | 0.0 | 972 |
| MsG0380012472.01.T01 | MTR_3g462680 | 33.403 | 479 | 180 | 14 | 31 | 490 | 6 | 364 | 1.00e-51 | 185 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012472.01.T01 | AT3G09070 | 50.928 | 485 | 166 | 15 | 30 | 468 | 25 | 483 | 2.73e-118 | 363 |
| MsG0380012472.01.T01 | AT2G38070 | 48.791 | 455 | 168 | 11 | 33 | 470 | 35 | 441 | 5.31e-105 | 327 |
| MsG0380012472.01.T01 | AT5G01170 | 45.082 | 488 | 177 | 22 | 1 | 478 | 1 | 407 | 8.77e-82 | 265 |
| MsG0380012472.01.T01 | AT3G46990 | 29.621 | 449 | 165 | 17 | 45 | 490 | 26 | 326 | 4.57e-23 | 103 |
| MsG0380012472.01.T01 | AT5G58930 | 34.426 | 244 | 81 | 8 | 252 | 490 | 130 | 299 | 3.73e-22 | 100 |
Find 154 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGATTCAGACGAAATT+AGG | 0.163130 | 3:-17051901 | MsG0380012472.01.T01:CDS |
| TGAGCTTGAGCTTGAGGTTT+AGG | 0.189703 | 3:+17052022 | None:intergenic |
| AACCAATCGGTCGGCAATTC+CGG | 0.193474 | 3:-17051541 | MsG0380012472.01.T01:CDS |
| TCTGGTTCTGGTATAATTTC+AGG | 0.195126 | 3:+17051794 | None:intergenic |
| CCACGAAACGGTAGCGTTTC+GGG | 0.208183 | 3:-17051590 | MsG0380012472.01.T01:CDS |
| AAGAAATCGCCGGAAGTTTC+TGG | 0.226315 | 3:-17051682 | MsG0380012472.01.T01:CDS |
| CAGTCGGAGATCGCGGATTA+TGG | 0.260342 | 3:-17051512 | MsG0380012472.01.T01:CDS |
| TTGTGGCGGTTGTTGTTGAT+TGG | 0.264489 | 3:+17052489 | None:intergenic |
| CGGTTTGGTTGGAGAATTAG+TGG | 0.298918 | 3:+17052430 | None:intergenic |
| GAGGTGGTGGAGGTGTTGTT+TGG | 0.306382 | 3:+17052319 | None:intergenic |
| GAGCTTGAGCTTGAGGTTTA+GGG | 0.306686 | 3:+17052023 | None:intergenic |
| GGAGGTGGAGGGACGGAAAA+TGG | 0.326674 | 3:+17052246 | None:intergenic |
| TGTGGCGGTTGTTGTTGATT+GGG | 0.328529 | 3:+17052490 | None:intergenic |
| GGTTGTTGCGGTGGTGGTGG+TGG | 0.329488 | 3:+17052454 | None:intergenic |
| TCCACGAAACGGTAGCGTTT+CGG | 0.333538 | 3:-17051591 | MsG0380012472.01.T01:CDS |
| GATTTAGTGCGGCGGAGTTC+AGG | 0.345251 | 3:+17052175 | None:intergenic |
| CAGGAGGTGGAGGGGCGGTT+TGG | 0.347705 | 3:+17052415 | None:intergenic |
| TTGAGGAAGTAGGAGGTTTA+CGG | 0.349555 | 3:+17052290 | None:intergenic |
| TTTACGGGTGGAGGAGGTGG+TGG | 0.359124 | 3:+17052306 | None:intergenic |
| AGGTTTACGGGTGGAGGAGG+TGG | 0.361398 | 3:+17052303 | None:intergenic |
| CATGCTAGTGCTAGTGTTAA+TGG | 0.361695 | 3:-17051047 | MsG0380012472.01.T01:CDS |
| ACCAATCGGTCGGCAATTCC+GGG | 0.366503 | 3:-17051540 | MsG0380012472.01.T01:CDS |
| AGGACGGCGTTGGGAGGTGG+AGG | 0.367503 | 3:+17052234 | None:intergenic |
| TTCAGGAAAGAGGGAGGATG+AGG | 0.370618 | 3:+17052192 | None:intergenic |
| TCGTGGGATGGTTACTTGAT+TGG | 0.374779 | 3:-17051386 | MsG0380012472.01.T01:CDS |
| AGAAGATTCAGACGAAATTA+GGG | 0.381740 | 3:-17051900 | MsG0380012472.01.T01:CDS |
| CGATCTCCGACTGTGTTTCC+CGG | 0.384422 | 3:+17051522 | None:intergenic |
| TGGAGGACGGCGTTGGGAGG+TGG | 0.392544 | 3:+17052231 | None:intergenic |
| TTGATAGGTCTAGTTCTATC+AGG | 0.394622 | 3:-17051154 | MsG0380012472.01.T01:CDS |
| CTGAAGCTTCTTGCTGAAAA+CGG | 0.394810 | 3:+17051649 | None:intergenic |
| TTCTTGAGGGTGAGTTTCAC+AGG | 0.397280 | 3:+17052396 | None:intergenic |
| AGTTGTGGATAGGGATTTGA+GGG | 0.398796 | 3:-17050977 | None:intergenic |
| TGAGGAAGTAGGAGGTTTAC+GGG | 0.400500 | 3:+17052291 | None:intergenic |
| TTCGTCTGCGTTTGATTCCC+CGG | 0.403080 | 3:+17051218 | None:intergenic |
| AGTAGGAGGTTTACGGGTGG+AGG | 0.406152 | 3:+17052297 | None:intergenic |
| GAGATCGCGGATTATGGCTT+TGG | 0.407582 | 3:-17051506 | MsG0380012472.01.T01:CDS |
| GTGGCGGTTGTTGTTGATTG+GGG | 0.411184 | 3:+17052491 | None:intergenic |
| CGTTGTGGTTGTTGTATTTG+TGG | 0.416827 | 3:+17051869 | None:intergenic |
| AAGAGCAGCGGCGGCGGTTG+AGG | 0.433468 | 3:+17052273 | None:intergenic |
| AAAACCGGTGGCTCCTCAAC+GGG | 0.441650 | 3:+17051275 | None:intergenic |
| GGCTTTAAGAGCAGCGGCGG+CGG | 0.441921 | 3:+17052267 | None:intergenic |
| TCGGTCCTTTGAACATGAAC+AGG | 0.442021 | 3:+17051308 | None:intergenic |
| AACTCTTGAGCTTGAGCTTG+AGG | 0.443403 | 3:+17052016 | None:intergenic |
| CGACCGATTGGTTTCTCCAC+CGG | 0.444145 | 3:+17051551 | None:intergenic |
| ACGGGTGGAGGAGGTGGTGG+AGG | 0.444949 | 3:+17052309 | None:intergenic |
| GCAGACGAAAGAGTATTATT+CGG | 0.445429 | 3:-17051204 | MsG0380012472.01.T01:CDS |
| AGGAGGTTTACGGGTGGAGG+AGG | 0.448026 | 3:+17052300 | None:intergenic |
| TTCAAACGAGCCGGAGAAGC+CGG | 0.453524 | 3:+17052123 | None:intergenic |
| TCACCATTCTCATTCAAAAC+CGG | 0.453891 | 3:+17051260 | None:intergenic |
| AGAAGTTGGAGGACGGCGTT+GGG | 0.454006 | 3:+17052225 | None:intergenic |
| GGTGGTTGTGATTGAATTTG+TGG | 0.456357 | 3:+17052472 | None:intergenic |
| GAGGTGGCGGTGTTAGAAGT+TGG | 0.458387 | 3:+17052211 | None:intergenic |
| TCAGCAAGAAGCTTCAGAAA+TGG | 0.459266 | 3:-17051643 | MsG0380012472.01.T01:CDS |
| GTAACCTTAGCATTAGAAAC+CGG | 0.462641 | 3:+17051089 | None:intergenic |
| GTGAGTTTCACAGGAGGTGG+AGG | 0.465119 | 3:+17052405 | None:intergenic |
| AGCTGCTGTTGTTGCTGAGA+TGG | 0.466880 | 3:-17051123 | MsG0380012472.01.T01:CDS |
| GAAGGATTCTCCGGCTTCTC+CGG | 0.467759 | 3:-17052133 | MsG0380012472.01.T01:CDS |
| CGGATTCATCGACGAGGAGA+AGG | 0.468564 | 3:-17051184 | MsG0380012472.01.T01:CDS |
| GAAGAAGAGGAAGAAGAAGA+AGG | 0.472054 | 3:-17051938 | MsG0380012472.01.T01:CDS |
| CCCGAAACGCTACCGTTTCG+TGG | 0.476435 | 3:+17051590 | None:intergenic |
| TCAACCACAGATAGCATAGT+AGG | 0.477773 | 3:+17051338 | None:intergenic |
| TCCCGGAATTGCCGACCGAT+TGG | 0.478109 | 3:+17051539 | None:intergenic |
| GAGTTTCACAGGAGGTGGAG+GGG | 0.479213 | 3:+17052407 | None:intergenic |
| TGGCGGTTGTTGTTGATTGG+GGG | 0.480581 | 3:+17052492 | None:intergenic |
| ATGGTCAAAAGTTGTGGATA+GGG | 0.484418 | 3:-17050986 | MsG0380012472.01.T01:CDS |
| GAGGCATGAAGGGCAGAAAC+CGG | 0.484858 | 3:+17052366 | None:intergenic |
| AGGTGGAGGGGCGGTTTGGT+TGG | 0.487326 | 3:+17052419 | None:intergenic |
| AGGGTGAGTTTCACAGGAGG+TGG | 0.488304 | 3:+17052402 | None:intergenic |
| CGCTGCTGACCAGAAACTTC+CGG | 0.494729 | 3:+17051673 | None:intergenic |
| TGATAGAACTAGACCTATCA+AGG | 0.502474 | 3:+17051156 | None:intergenic |
| TCGCGGATTATGGCTTTGGC+AGG | 0.506259 | 3:-17051502 | MsG0380012472.01.T01:CDS |
| GGAGAAGGAAAAGCCTTGAT+AGG | 0.506954 | 3:-17051169 | MsG0380012472.01.T01:CDS |
| GCGGCGGCGGTTGAGGAAGT+AGG | 0.506999 | 3:+17052280 | None:intergenic |
| TGCGGCGGAGTTCAGGAAAG+AGG | 0.508872 | 3:+17052182 | None:intergenic |
| GCTACGACCACGAACGTCAC+AGG | 0.508883 | 3:+17052087 | None:intergenic |
| AAGTTGTGGATAGGGATTTG+AGG | 0.509897 | 3:-17050978 | None:intergenic |
| CATGGTCAAAAGTTGTGGAT+AGG | 0.510073 | 3:-17050987 | MsG0380012472.01.T01:CDS |
| GTTTCACGAAATTGTTGAAG+AGG | 0.516339 | 3:-17051819 | MsG0380012472.01.T01:CDS |
| AGGCGTTCGCAGAGGCATGA+AGG | 0.516818 | 3:+17052355 | None:intergenic |
| TAGAAGTTGGAGGACGGCGT+TGG | 0.521271 | 3:+17052224 | None:intergenic |
| CGAAAATCCTGTGACGTTCG+TGG | 0.521358 | 3:-17052094 | MsG0380012472.01.T01:CDS |
| TGTTACATGGTCAAAAGTTG+TGG | 0.521852 | 3:-17050992 | MsG0380012472.01.T01:CDS |
| GGTATTGATTATTTGTTACA+TGG | 0.523656 | 3:-17051005 | MsG0380012472.01.T01:CDS |
| TCCTCTTCAGACTCAATGAA+CGG | 0.524340 | 3:+17051965 | None:intergenic |
| TGAGTTTCACAGGAGGTGGA+GGG | 0.528833 | 3:+17052406 | None:intergenic |
| CTCAACGGGTATAAGTGAAT+CGG | 0.531899 | 3:+17051289 | None:intergenic |
| GGCGGTTGTTGTTGATTGGG+GGG | 0.531907 | 3:+17052493 | None:intergenic |
| TCGACGAGCCACGAGCTTCG+TGG | 0.534548 | 3:-17051403 | MsG0380012472.01.T01:CDS |
| AAGCAGAAAGCAAAGAAAAG+AGG | 0.535351 | 3:-17051614 | MsG0380012472.01.T01:CDS |
| TGAGATGGATGAGCTCAAAC+CGG | 0.537135 | 3:-17051108 | MsG0380012472.01.T01:CDS |
| CGGATTATGGCTTTGGCAGG+AGG | 0.537390 | 3:-17051499 | MsG0380012472.01.T01:CDS |
| AACCGGTGAAAACTTCTTGA+GGG | 0.537726 | 3:+17052383 | None:intergenic |
| AAAGAGGGAGGATGAGGTGG+CGG | 0.542205 | 3:+17052198 | None:intergenic |
| AGAATCATTGAAGCCGATGA+AGG | 0.542902 | 3:-17051756 | MsG0380012472.01.T01:CDS |
| ATAGTAGGCAAAGGCACCCT+TGG | 0.550274 | 3:+17051353 | None:intergenic |
| GCATGAACACTAGCAGTAGC+AGG | 0.551023 | 3:+17051065 | None:intergenic |
| CGACGAGCCACGAGCTTCGT+GGG | 0.551064 | 3:-17051402 | MsG0380012472.01.T01:CDS |
| GTTTGGTTGGAGAATTAGTG+GGG | 0.551414 | 3:+17052432 | None:intergenic |
| GGCGTTGGGAGGTGGAGGGA+CGG | 0.552250 | 3:+17052239 | None:intergenic |
| AGATCCATGTGCTCCTTCAT+CGG | 0.552279 | 3:+17051743 | None:intergenic |
| GGCGTTCGCAGAGGCATGAA+GGG | 0.555544 | 3:+17052356 | None:intergenic |
| TCGCTGAGGTTCAAACGAGC+CGG | 0.557920 | 3:+17052114 | None:intergenic |
| TTGCCGGTGGAGAAACCAAT+CGG | 0.561738 | 3:-17051554 | MsG0380012472.01.T01:CDS |
| GGTGGTGCTAATGCTAATGC+TGG | 0.562157 | 3:-17051026 | MsG0380012472.01.T01:CDS |
| TGAAGAGGAAAACGAAGAAG+AGG | 0.564139 | 3:-17051951 | MsG0380012472.01.T01:CDS |
| ATGCTCCTGTTCATGTTCAA+AGG | 0.564280 | 3:-17051313 | MsG0380012472.01.T01:CDS |
| GATTTCTTTCAAATCTCGAC+CGG | 0.564400 | 3:+17051697 | None:intergenic |
| CAAACCGGTTTCTAATGCTA+AGG | 0.567676 | 3:-17051093 | MsG0380012472.01.T01:CDS |
| ACCGTTCATTGAGTCTGAAG+AGG | 0.568177 | 3:-17051966 | MsG0380012472.01.T01:CDS |
| GGTTTGGTTGGAGAATTAGT+GGG | 0.569087 | 3:+17052431 | None:intergenic |
| AAGAAAAGAGGTCCACGAAA+CGG | 0.569289 | 3:-17051602 | MsG0380012472.01.T01:CDS |
| ACATTTGACAATTCTCGTTG+TGG | 0.569509 | 3:+17051854 | None:intergenic |
| CAAAACCGGTGGCTCCTCAA+CGG | 0.569831 | 3:+17051274 | None:intergenic |
| AAACCGGTGAAAACTTCTTG+AGG | 0.571348 | 3:+17052382 | None:intergenic |
| TATACCCGTTGAGGAGCCAC+CGG | 0.576804 | 3:-17051279 | MsG0380012472.01.T01:CDS |
| AGGAAAGAGGGAGGATGAGG+TGG | 0.581217 | 3:+17052195 | None:intergenic |
| GGTGTTGTTTGGATCGAGAA+CGG | 0.581491 | 3:+17052330 | None:intergenic |
| TTTCACAGGAGGTGGAGGGG+CGG | 0.585227 | 3:+17052410 | None:intergenic |
| TTGAGGGTGAGTTTCACAGG+AGG | 0.585858 | 3:+17052399 | None:intergenic |
| GCGGCGGAGTTCAGGAAAGA+GGG | 0.587894 | 3:+17052183 | None:intergenic |
| CTTTACTCTCTTCAATCAAG+CGG | 0.593912 | 3:-17052059 | MsG0380012472.01.T01:CDS |
| GCAAGAAGCTTCAGAAATGG+AGG | 0.595059 | 3:-17051640 | MsG0380012472.01.T01:CDS |
| AGTTGGAGGACGGCGTTGGG+AGG | 0.597248 | 3:+17052228 | None:intergenic |
| TTTGCCTACTATGCTATCTG+TGG | 0.597751 | 3:-17051342 | MsG0380012472.01.T01:CDS |
| GTGGCGGTGTTAGAAGTTGG+AGG | 0.604647 | 3:+17052214 | None:intergenic |
| GAGCCACGAGCTTCGTGGGA+TGG | 0.604745 | 3:-17051398 | MsG0380012472.01.T01:CDS |
| CGATTCACTTATACCCGTTG+AGG | 0.605957 | 3:-17051288 | MsG0380012472.01.T01:CDS |
| CCATTCTCATTCAAAACCGG+TGG | 0.606193 | 3:+17051263 | None:intergenic |
| GCGGCGGTTGAGGAAGTAGG+AGG | 0.612278 | 3:+17052283 | None:intergenic |
| GGACGGCGTTGGGAGGTGGA+GGG | 0.619115 | 3:+17052235 | None:intergenic |
| GAAGCCGATGAAGGAGCACA+TGG | 0.624696 | 3:-17051747 | MsG0380012472.01.T01:CDS |
| AATGGCTTTAAGAGCAGCGG+CGG | 0.625114 | 3:+17052264 | None:intergenic |
| CGAGATTTGAAAGAAATCGC+CGG | 0.626204 | 3:-17051692 | MsG0380012472.01.T01:CDS |
| GGAAACACAGTCGGAGATCG+CGG | 0.628056 | 3:-17051519 | MsG0380012472.01.T01:CDS |
| CGGTGTTAGAAGTTGGAGGA+CGG | 0.629384 | 3:+17052218 | None:intergenic |
| CGGTGGAGAAACCAATCGGT+CGG | 0.630712 | 3:-17051550 | MsG0380012472.01.T01:CDS |
| GGAAGTAGGAGGTTTACGGG+TGG | 0.642372 | 3:+17052294 | None:intergenic |
| GCAATTCCGGGAAACACAGT+CGG | 0.656643 | 3:-17051528 | MsG0380012472.01.T01:CDS |
| TAACCATCCCACGAAGCTCG+TGG | 0.657251 | 3:+17051395 | None:intergenic |
| TTTGGTTGGAGAATTAGTGG+GGG | 0.657401 | 3:+17052433 | None:intergenic |
| GCAATATCAAGCGAAAACCT+CGG | 0.659790 | 3:+17051461 | None:intergenic |
| GAACGGCGAGGCGTTCGCAG+AGG | 0.662076 | 3:+17052347 | None:intergenic |
| ACAGATAGCATAGTAGGCAA+AGG | 0.667192 | 3:+17051344 | None:intergenic |
| GAAAATGGCTTTAAGAGCAG+CGG | 0.667195 | 3:+17052261 | None:intergenic |
| GGTTGTGATTGAATTTGTGG+CGG | 0.679994 | 3:+17052475 | None:intergenic |
| GGCTCGTCGAACGAATACCT+CGG | 0.684957 | 3:+17051416 | None:intergenic |
| GCTAGTGCTAGTGTTAATGG+TGG | 0.688223 | 3:-17051044 | MsG0380012472.01.T01:CDS |
| GCGGAGTTCAGGAAAGAGGG+AGG | 0.701130 | 3:+17052186 | None:intergenic |
| CGGAGAAGGATTTAGTGCGG+CGG | 0.706003 | 3:+17052167 | None:intergenic |
| AGGCGGAGAAGGATTTAGTG+CGG | 0.708493 | 3:+17052164 | None:intergenic |
| GGTCATGTGATACTGATCCG+AGG | 0.726181 | 3:-17051478 | MsG0380012472.01.T01:CDS |
| TGTCGTTCGATAATGATCCG+AGG | 0.727327 | 3:-17051433 | MsG0380012472.01.T01:CDS |
| TGTTTGGATCGAGAACGGCG+AGG | 0.735915 | 3:+17052335 | None:intergenic |
| ATTATTCGGATTCATCGACG+AGG | 0.766872 | 3:-17051190 | MsG0380012472.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAGATTAATGTGAATTTTC+CGG | - | Chr3:17052242-17052261 | MsG0380012472.01.T01:CDS | 25.0% |
| !!! | GGTATTGATTATTTGTTACA+TGG | - | Chr3:17052474-17052493 | MsG0380012472.01.T01:CDS | 25.0% |
| AAGAAGATTCAGACGAAATT+AGG | - | Chr3:17051578-17051597 | MsG0380012472.01.T01:CDS | 30.0% | |
| AGAAGATTCAGACGAAATTA+GGG | - | Chr3:17051579-17051598 | MsG0380012472.01.T01:CDS | 30.0% | |
| TCACAACCAAAGAAAAATTC+CGG | - | Chr3:17051763-17051782 | MsG0380012472.01.T01:CDS | 30.0% | |
| ! | AGATTAATGTGAATTTTCCG+GGG | - | Chr3:17052244-17052263 | MsG0380012472.01.T01:CDS | 30.0% |
| ! | GAGATTAATGTGAATTTTCC+GGG | - | Chr3:17052243-17052262 | MsG0380012472.01.T01:CDS | 30.0% |
| AAGCAGAAAGCAAAGAAAAG+AGG | - | Chr3:17051865-17051884 | MsG0380012472.01.T01:CDS | 35.0% | |
| ACATTTGACAATTCTCGTTG+TGG | + | Chr3:17051628-17051647 | None:intergenic | 35.0% | |
| ATGGTCAAAAGTTGTGGATA+GGG | - | Chr3:17052493-17052512 | MsG0380012472.01.T01:CDS | 35.0% | |
| CTTTACTCTCTTCAATCAAG+CGG | - | Chr3:17051420-17051439 | MsG0380012472.01.T01:CDS | 35.0% | |
| GATTGGAAAAACGTTTCCAA+GGG | - | Chr3:17052110-17052129 | MsG0380012472.01.T01:CDS | 35.0% | |
| GATTTCTTTCAAATCTCGAC+CGG | + | Chr3:17051785-17051804 | None:intergenic | 35.0% | |
| GTAACCTTAGCATTAGAAAC+CGG | + | Chr3:17052393-17052412 | None:intergenic | 35.0% | |
| GTTTCACGAAATTGTTGAAG+AGG | - | Chr3:17051660-17051679 | MsG0380012472.01.T01:CDS | 35.0% | |
| TCACCATTCTCATTCAAAAC+CGG | + | Chr3:17052222-17052241 | None:intergenic | 35.0% | |
| TCTTCTGTAAAAACAAGCTC+TGG | + | Chr3:17051706-17051725 | None:intergenic | 35.0% | |
| TGATAGAACTAGACCTATCA+AGG | + | Chr3:17052326-17052345 | None:intergenic | 35.0% | |
| TGATTGGAAAAACGTTTCCA+AGG | - | Chr3:17052109-17052128 | MsG0380012472.01.T01:CDS | 35.0% | |
| TGTTACATGGTCAAAAGTTG+TGG | - | Chr3:17052487-17052506 | MsG0380012472.01.T01:CDS | 35.0% | |
| !! | GCAGACGAAAGAGTATTATT+CGG | - | Chr3:17052275-17052294 | MsG0380012472.01.T01:CDS | 35.0% |
| !! | TCTGGTTCTGGTATAATTTC+AGG | + | Chr3:17051688-17051707 | None:intergenic | 35.0% |
| !! | TTGATAGGTCTAGTTCTATC+AGG | - | Chr3:17052325-17052344 | MsG0380012472.01.T01:CDS | 35.0% |
| AAACCGGTGAAAACTTCTTG+AGG | + | Chr3:17051100-17051119 | None:intergenic | 40.0% | |
| AACCGGTGAAAACTTCTTGA+GGG | + | Chr3:17051099-17051118 | None:intergenic | 40.0% | |
| AAGAAAAGAGGTCCACGAAA+CGG | - | Chr3:17051877-17051896 | MsG0380012472.01.T01:CDS | 40.0% | |
| ACAGATAGCATAGTAGGCAA+AGG | + | Chr3:17052138-17052157 | None:intergenic | 40.0% | |
| AGAATCATTGAAGCCGATGA+AGG | - | Chr3:17051723-17051742 | MsG0380012472.01.T01:CDS | 40.0% | |
| ATGCTCCTGTTCATGTTCAA+AGG | - | Chr3:17052166-17052185 | MsG0380012472.01.T01:CDS | 40.0% | |
| ATTATTCGGATTCATCGACG+AGG | - | Chr3:17052289-17052308 | MsG0380012472.01.T01:CDS | 40.0% | |
| CATGCTAGTGCTAGTGTTAA+TGG | - | Chr3:17052432-17052451 | MsG0380012472.01.T01:CDS | 40.0% | |
| CATGGTCAAAAGTTGTGGAT+AGG | - | Chr3:17052492-17052511 | MsG0380012472.01.T01:CDS | 40.0% | |
| CGAGATTTGAAAGAAATCGC+CGG | - | Chr3:17051787-17051806 | MsG0380012472.01.T01:CDS | 40.0% | |
| CGTTGTGGTTGTTGTATTTG+TGG | + | Chr3:17051613-17051632 | None:intergenic | 40.0% | |
| CTCAACGGGTATAAGTGAAT+CGG | + | Chr3:17052193-17052212 | None:intergenic | 40.0% | |
| CTGAAGCTTCTTGCTGAAAA+CGG | + | Chr3:17051833-17051852 | None:intergenic | 40.0% | |
| GAAGAAGAGGAAGAAGAAGA+AGG | - | Chr3:17051541-17051560 | MsG0380012472.01.T01:CDS | 40.0% | |
| GCAATATCAAGCGAAAACCT+CGG | + | Chr3:17052021-17052040 | None:intergenic | 40.0% | |
| GGTGGTTGTGATTGAATTTG+TGG | + | Chr3:17051010-17051029 | None:intergenic | 40.0% | |
| GGTTGTGATTGAATTTGTGG+CGG | + | Chr3:17051007-17051026 | None:intergenic | 40.0% | |
| GTTTGGTTGGAGAATTAGTG+GGG | + | Chr3:17051050-17051069 | None:intergenic | 40.0% | |
| TCAACCACAGATAGCATAGT+AGG | + | Chr3:17052144-17052163 | None:intergenic | 40.0% | |
| TCAGCAAGAAGCTTCAGAAA+TGG | - | Chr3:17051836-17051855 | MsG0380012472.01.T01:CDS | 40.0% | |
| TCCAAAAACGAAGGATTCTC+CGG | - | Chr3:17051337-17051356 | MsG0380012472.01.T01:CDS | 40.0% | |
| TCCTCTTCAGACTCAATGAA+CGG | + | Chr3:17051517-17051536 | None:intergenic | 40.0% | |
| TGAAGAGGAAAACGAAGAAG+AGG | - | Chr3:17051528-17051547 | MsG0380012472.01.T01:CDS | 40.0% | |
| TTGAGGAAGTAGGAGGTTTA+CGG | + | Chr3:17051192-17051211 | None:intergenic | 40.0% | |
| TTTGCCTACTATGCTATCTG+TGG | - | Chr3:17052137-17052156 | MsG0380012472.01.T01:CDS | 40.0% | |
| TTTGGTTGGAGAATTAGTGG+GGG | + | Chr3:17051049-17051068 | None:intergenic | 40.0% | |
| ! | CAAACCGGTTTCTAATGCTA+AGG | - | Chr3:17052386-17052405 | MsG0380012472.01.T01:CDS | 40.0% |
| ! | GGTTTGGTTGGAGAATTAGT+GGG | + | Chr3:17051051-17051070 | None:intergenic | 40.0% |
| ! | GTAAAAACAAGCTCTGGTTC+TGG | + | Chr3:17051700-17051719 | None:intergenic | 40.0% |
| ! | TCTCGACCGGAATTTTTCTT+TGG | + | Chr3:17051772-17051791 | None:intergenic | 40.0% |
| !! | GAAAATGGCTTTAAGAGCAG+CGG | + | Chr3:17051221-17051240 | None:intergenic | 40.0% |
| AACTCTTGAGCTTGAGCTTG+AGG | + | Chr3:17051466-17051485 | None:intergenic | 45.0% | |
| AAGAAATCGCCGGAAGTTTC+TGG | - | Chr3:17051797-17051816 | MsG0380012472.01.T01:CDS | 45.0% | |
| ACCGTTCATTGAGTCTGAAG+AGG | - | Chr3:17051513-17051532 | MsG0380012472.01.T01:CDS | 45.0% | |
| AGAATTAGTGGGGGTTGTTG+CGG | + | Chr3:17051040-17051059 | None:intergenic | 45.0% | |
| AGATCCATGTGCTCCTTCAT+CGG | + | Chr3:17051739-17051758 | None:intergenic | 45.0% | |
| CCATTCTCATTCAAAACCGG+TGG | + | Chr3:17052219-17052238 | None:intergenic | 45.0% | |
| CGATTCACTTATACCCGTTG+AGG | - | Chr3:17052191-17052210 | MsG0380012472.01.T01:CDS | 45.0% | |
| GAGCTTGAGCTTGAGGTTTA+GGG | + | Chr3:17051459-17051478 | None:intergenic | 45.0% | |
| GCAAGAAGCTTCAGAAATGG+AGG | - | Chr3:17051839-17051858 | MsG0380012472.01.T01:CDS | 45.0% | |
| GCTAGTGCTAGTGTTAATGG+TGG | - | Chr3:17052435-17052454 | MsG0380012472.01.T01:CDS | 45.0% | |
| GGAGAAGGAAAAGCCTTGAT+AGG | - | Chr3:17052310-17052329 | MsG0380012472.01.T01:CDS | 45.0% | |
| TCGGTCCTTTGAACATGAAC+AGG | + | Chr3:17052174-17052193 | None:intergenic | 45.0% | |
| TCGTGGGATGGTTACTTGAT+TGG | - | Chr3:17052093-17052112 | MsG0380012472.01.T01:CDS | 45.0% | |
| TGAGATGGATGAGCTCAAAC+CGG | - | Chr3:17052371-17052390 | MsG0380012472.01.T01:CDS | 45.0% | |
| TGAGCTTGAGCTTGAGGTTT+AGG | + | Chr3:17051460-17051479 | None:intergenic | 45.0% | |
| TGAGGAAGTAGGAGGTTTAC+GGG | + | Chr3:17051191-17051210 | None:intergenic | 45.0% | |
| TGTCGTTCGATAATGATCCG+AGG | - | Chr3:17052046-17052065 | MsG0380012472.01.T01:CDS | 45.0% | |
| TTCTTGAGGGTGAGTTTCAC+AGG | + | Chr3:17051086-17051105 | None:intergenic | 45.0% | |
| ! | CACCCTCAAGAAGTTTTCAC+CGG | - | Chr3:17051094-17051113 | MsG0380012472.01.T01:CDS | 45.0% |
| ! | TGTGGCGGTTGTTGTTGATT+GGG | + | Chr3:17050992-17051011 | None:intergenic | 45.0% |
| ! | TTGTGGCGGTTGTTGTTGAT+TGG | + | Chr3:17050993-17051012 | None:intergenic | 45.0% |
| !! | CGGTTTGGTTGGAGAATTAG+TGG | + | Chr3:17051052-17051071 | None:intergenic | 45.0% |
| !! | GAATCCTTCGTTTTTGGAGG+CGG | + | Chr3:17051335-17051354 | None:intergenic | 45.0% |
| !! | GGAGAATCCTTCGTTTTTGG+AGG | + | Chr3:17051338-17051357 | None:intergenic | 45.0% |
| !! | GGTGTTGTTTGGATCGAGAA+CGG | + | Chr3:17051152-17051171 | None:intergenic | 45.0% |
| !!! | CCACCGGTTTTGAATGAGAA+TGG | - | Chr3:17052216-17052235 | MsG0380012472.01.T01:CDS | 45.0% |
| AACCAATCGGTCGGCAATTC+CGG | - | Chr3:17051938-17051957 | MsG0380012472.01.T01:CDS | 50.0% | |
| AGCTGCTGTTGTTGCTGAGA+TGG | - | Chr3:17052356-17052375 | MsG0380012472.01.T01:CDS | 50.0% | |
| AGGCGGAGAAGGATTTAGTG+CGG | + | Chr3:17051318-17051337 | None:intergenic | 50.0% | |
| CGAAAATCCTGTGACGTTCG+TGG | - | Chr3:17051385-17051404 | MsG0380012472.01.T01:CDS | 50.0% | |
| GCAATTCCGGGAAACACAGT+CGG | - | Chr3:17051951-17051970 | MsG0380012472.01.T01:CDS | 50.0% | |
| GCATGAACACTAGCAGTAGC+AGG | + | Chr3:17052417-17052436 | None:intergenic | 50.0% | |
| GGTCATGTGATACTGATCCG+AGG | - | Chr3:17052001-17052020 | MsG0380012472.01.T01:CDS | 50.0% | |
| TCCACGAAACGGTAGCGTTT+CGG | - | Chr3:17051888-17051907 | MsG0380012472.01.T01:CDS | 50.0% | |
| TGAGTTTCACAGGAGGTGGA+GGG | + | Chr3:17051076-17051095 | None:intergenic | 50.0% | |
| TTCAGGAAAGAGGGAGGATG+AGG | + | Chr3:17051290-17051309 | None:intergenic | 50.0% | |
| TTCGTCTGCGTTTGATTCCC+CGG | + | Chr3:17052264-17052283 | None:intergenic | 50.0% | |
| TTCTCCGCCTCCAAAAACGA+AGG | - | Chr3:17051328-17051347 | MsG0380012472.01.T01:CDS | 50.0% | |
| TTGAGGGTGAGTTTCACAGG+AGG | + | Chr3:17051083-17051102 | None:intergenic | 50.0% | |
| TTGCCGGTGGAGAAACCAAT+CGG | - | Chr3:17051925-17051944 | MsG0380012472.01.T01:CDS | 50.0% | |
| ! | ACGTCACAGGATTTTCGCTG+AGG | + | Chr3:17051382-17051401 | None:intergenic | 50.0% |
| ! | CGGTGTTAGAAGTTGGAGGA+CGG | + | Chr3:17051264-17051283 | None:intergenic | 50.0% |
| ! | GAGATCGCGGATTATGGCTT+TGG | - | Chr3:17051973-17051992 | MsG0380012472.01.T01:CDS | 50.0% |
| ! | GCCGGAGAATCCTTCGTTTT+TGG | + | Chr3:17051341-17051360 | None:intergenic | 50.0% |
| ! | GGGTTCTTCAACGCTTTTGC+CGG | - | Chr3:17051909-17051928 | MsG0380012472.01.T01:CDS | 50.0% |
| ! | GGTGGTGCTAATGCTAATGC+TGG | - | Chr3:17052453-17052472 | MsG0380012472.01.T01:CDS | 50.0% |
| ! | GTGGCGGTTGTTGTTGATTG+GGG | + | Chr3:17050991-17051010 | None:intergenic | 50.0% |
| ! | TGGCGGTTGTTGTTGATTGG+GGG | + | Chr3:17050990-17051009 | None:intergenic | 50.0% |
| ! | TTCTTCAACGCTTTTGCCGG+TGG | - | Chr3:17051912-17051931 | MsG0380012472.01.T01:CDS | 50.0% |
| !! | AATGGCTTTAAGAGCAGCGG+CGG | + | Chr3:17051218-17051237 | None:intergenic | 50.0% |
| !! | ATAGTAGGCAAAGGCACCCT+TGG | + | Chr3:17052129-17052148 | None:intergenic | 50.0% |
| !! | TTCGTTTTTGGAGGCGGAGA+AGG | + | Chr3:17051329-17051348 | None:intergenic | 50.0% |
| AAAACCGGTGGCTCCTCAAC+GGG | + | Chr3:17052207-17052226 | None:intergenic | 55.0% | |
| AAAGAGGGAGGATGAGGTGG+CGG | + | Chr3:17051284-17051303 | None:intergenic | 55.0% | |
| ACCAATCGGTCGGCAATTCC+GGG | - | Chr3:17051939-17051958 | MsG0380012472.01.T01:CDS | 55.0% | |
| AGAAGTTGGAGGACGGCGTT+GGG | + | Chr3:17051257-17051276 | None:intergenic | 55.0% | |
| AGGAAAGAGGGAGGATGAGG+TGG | + | Chr3:17051287-17051306 | None:intergenic | 55.0% | |
| AGGGTGAGTTTCACAGGAGG+TGG | + | Chr3:17051080-17051099 | None:intergenic | 55.0% | |
| AGTAGGAGGTTTACGGGTGG+AGG | + | Chr3:17051185-17051204 | None:intergenic | 55.0% | |
| ATTAGTGGGGGTTGTTGCGG+TGG | + | Chr3:17051037-17051056 | None:intergenic | 55.0% | |
| CAAAACCGGTGGCTCCTCAA+CGG | + | Chr3:17052208-17052227 | None:intergenic | 55.0% | |
| CCACGAAACGGTAGCGTTTC+GGG | - | Chr3:17051889-17051908 | MsG0380012472.01.T01:CDS | 55.0% | |
| CGATCTCCGACTGTGTTTCC+CGG | + | Chr3:17051960-17051979 | None:intergenic | 55.0% | |
| CGCTGCTGACCAGAAACTTC+CGG | + | Chr3:17051809-17051828 | None:intergenic | 55.0% | |
| CGGAGAAGGATTTAGTGCGG+CGG | + | Chr3:17051315-17051334 | None:intergenic | 55.0% | |
| CGGATTCATCGACGAGGAGA+AGG | - | Chr3:17052295-17052314 | MsG0380012472.01.T01:CDS | 55.0% | |
| CGGTGGAGAAACCAATCGGT+CGG | - | Chr3:17051929-17051948 | MsG0380012472.01.T01:CDS | 55.0% | |
| GAAGGATTCTCCGGCTTCTC+CGG | - | Chr3:17051346-17051365 | MsG0380012472.01.T01:CDS | 55.0% | |
| GAGGCATGAAGGGCAGAAAC+CGG | + | Chr3:17051116-17051135 | None:intergenic | 55.0% | |
| GAGTTTCACAGGAGGTGGAG+GGG | + | Chr3:17051075-17051094 | None:intergenic | 55.0% | |
| GATTTAGTGCGGCGGAGTTC+AGG | + | Chr3:17051307-17051326 | None:intergenic | 55.0% | |
| GGAAACACAGTCGGAGATCG+CGG | - | Chr3:17051960-17051979 | MsG0380012472.01.T01:CDS | 55.0% | |
| GGAAGTAGGAGGTTTACGGG+TGG | + | Chr3:17051188-17051207 | None:intergenic | 55.0% | |
| GGCTCGTCGAACGAATACCT+CGG | + | Chr3:17052066-17052085 | None:intergenic | 55.0% | |
| GTGAGTTTCACAGGAGGTGG+AGG | + | Chr3:17051077-17051096 | None:intergenic | 55.0% | |
| TAACCATCCCACGAAGCTCG+TGG | + | Chr3:17052087-17052106 | None:intergenic | 55.0% | |
| TAGAAGTTGGAGGACGGCGT+TGG | + | Chr3:17051258-17051277 | None:intergenic | 55.0% | |
| TATACCCGTTGAGGAGCCAC+CGG | - | Chr3:17052200-17052219 | MsG0380012472.01.T01:CDS | 55.0% | |
| TCGCTGAGGTTCAAACGAGC+CGG | + | Chr3:17051368-17051387 | None:intergenic | 55.0% | |
| TGTTTGGATCGAGAACGGCG+AGG | + | Chr3:17051147-17051166 | None:intergenic | 55.0% | |
| TTCAAACGAGCCGGAGAAGC+CGG | + | Chr3:17051359-17051378 | None:intergenic | 55.0% | |
| ! | CAGTCGGAGATCGCGGATTA+TGG | - | Chr3:17051967-17051986 | MsG0380012472.01.T01:CDS | 55.0% |
| ! | GAAGCCGATGAAGGAGCACA+TGG | - | Chr3:17051732-17051751 | MsG0380012472.01.T01:CDS | 55.0% |
| ! | GAGGTGGCGGTGTTAGAAGT+TGG | + | Chr3:17051271-17051290 | None:intergenic | 55.0% |
| ! | GGCGGTTGTTGTTGATTGGG+GGG | + | Chr3:17050989-17051008 | None:intergenic | 55.0% |
| ! | GTGGCGGTGTTAGAAGTTGG+AGG | + | Chr3:17051268-17051287 | None:intergenic | 55.0% |
| !! | CGACCGATTGGTTTCTCCAC+CGG | + | Chr3:17051931-17051950 | None:intergenic | 55.0% |
| !! | CGGATTATGGCTTTGGCAGG+AGG | - | Chr3:17051980-17051999 | MsG0380012472.01.T01:CDS | 55.0% |
| !! | GAGGTGGTGGAGGTGTTGTT+TGG | + | Chr3:17051163-17051182 | None:intergenic | 55.0% |
| !! | TCGCGGATTATGGCTTTGGC+AGG | - | Chr3:17051977-17051996 | MsG0380012472.01.T01:CDS | 55.0% |
| AGGAGGTTTACGGGTGGAGG+AGG | + | Chr3:17051182-17051201 | None:intergenic | 60.0% | |
| AGGTTTACGGGTGGAGGAGG+TGG | + | Chr3:17051179-17051198 | None:intergenic | 60.0% | |
| CCCGAAACGCTACCGTTTCG+TGG | + | Chr3:17051892-17051911 | None:intergenic | 60.0% | |
| GCGGAGTTCAGGAAAGAGGG+AGG | + | Chr3:17051296-17051315 | None:intergenic | 60.0% | |
| GCGGCGGAGTTCAGGAAAGA+GGG | + | Chr3:17051299-17051318 | None:intergenic | 60.0% | |
| GCTACGACCACGAACGTCAC+AGG | + | Chr3:17051395-17051414 | None:intergenic | 60.0% | |
| GGAGGTGGAGGGACGGAAAA+TGG | + | Chr3:17051236-17051255 | None:intergenic | 60.0% | |
| TCCCGGAATTGCCGACCGAT+TGG | + | Chr3:17051943-17051962 | None:intergenic | 60.0% | |
| TGCGGCGGAGTTCAGGAAAG+AGG | + | Chr3:17051300-17051319 | None:intergenic | 60.0% | |
| TTTACGGGTGGAGGAGGTGG+TGG | + | Chr3:17051176-17051195 | None:intergenic | 60.0% | |
| TTTCACAGGAGGTGGAGGGG+CGG | + | Chr3:17051072-17051091 | None:intergenic | 60.0% | |
| ! | AGGCGTTCGCAGAGGCATGA+AGG | + | Chr3:17051127-17051146 | None:intergenic | 60.0% |
| ! | GGCGTTCGCAGAGGCATGAA+GGG | + | Chr3:17051126-17051145 | None:intergenic | 60.0% |
| AGTGGGGGTTGTTGCGGTGG+TGG | + | Chr3:17051034-17051053 | None:intergenic | 65.0% | |
| CGACGAGCCACGAGCTTCGT+GGG | - | Chr3:17052077-17052096 | MsG0380012472.01.T01:CDS | 65.0% | |
| GAGCCACGAGCTTCGTGGGA+TGG | - | Chr3:17052081-17052100 | MsG0380012472.01.T01:CDS | 65.0% | |
| GCGGCGGTTGAGGAAGTAGG+AGG | + | Chr3:17051199-17051218 | None:intergenic | 65.0% | |
| TCGACGAGCCACGAGCTTCG+TGG | - | Chr3:17052076-17052095 | MsG0380012472.01.T01:CDS | 65.0% | |
| ! | AGTTGGAGGACGGCGTTGGG+AGG | + | Chr3:17051254-17051273 | None:intergenic | 65.0% |
| !! | AGGTGGAGGGGCGGTTTGGT+TGG | + | Chr3:17051063-17051082 | None:intergenic | 65.0% |
| !! | GGCTTTAAGAGCAGCGGCGG+CGG | + | Chr3:17051215-17051234 | None:intergenic | 65.0% |
| !! | GGTTGTTGCGGTGGTGGTGG+TGG | + | Chr3:17051028-17051047 | None:intergenic | 65.0% |
| AAGAGCAGCGGCGGCGGTTG+AGG | + | Chr3:17051209-17051228 | None:intergenic | 70.0% | |
| CAGGAGGTGGAGGGGCGGTT+TGG | + | Chr3:17051067-17051086 | None:intergenic | 70.0% | |
| GCGGCGGCGGTTGAGGAAGT+AGG | + | Chr3:17051202-17051221 | None:intergenic | 70.0% | |
| ! | ACGGGTGGAGGAGGTGGTGG+AGG | + | Chr3:17051173-17051192 | None:intergenic | 70.0% |
| ! | AGGACGGCGTTGGGAGGTGG+AGG | + | Chr3:17051248-17051267 | None:intergenic | 70.0% |
| ! | GAACGGCGAGGCGTTCGCAG+AGG | + | Chr3:17051135-17051154 | None:intergenic | 70.0% |
| ! | GGACGGCGTTGGGAGGTGGA+GGG | + | Chr3:17051247-17051266 | None:intergenic | 70.0% |
| ! | GGCGTTGGGAGGTGGAGGGA+CGG | + | Chr3:17051243-17051262 | None:intergenic | 70.0% |
| ! | GGGGGTTGTTGCGGTGGTGG+TGG | + | Chr3:17051031-17051050 | None:intergenic | 70.0% |
| ! | TGGAGGACGGCGTTGGGAGG+TGG | + | Chr3:17051251-17051270 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 17050980 | 17052521 | 17050980 | ID=MsG0380012472.01;Name=MsG0380012472.01 |
| Chr3 | mRNA | 17050980 | 17052521 | 17050980 | ID=MsG0380012472.01.T01;Parent=MsG0380012472.01;Name=MsG0380012472.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|513 |
| Chr3 | exon | 17050980 | 17052521 | 17050980 | ID=MsG0380012472.01.T01:exon:6741;Parent=MsG0380012472.01.T01 |
| Chr3 | CDS | 17050980 | 17052521 | 17050980 | ID=MsG0380012472.01.T01:cds;Parent=MsG0380012472.01.T01 |
| Gene Sequence |
| Protein sequence |
