AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480024002.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480024002.01.T01 MTR_8g106900 85.455 275 24 4 1 267 1 267 2.61e-143 406
MsG0480024002.01.T01 MTR_7g104720 56.463 147 60 2 109 255 246 388 8.73e-47 164
MsG0480024002.01.T01 MTR_1g090400 45.161 155 82 3 114 268 215 366 2.57e-38 140
MsG0480024002.01.T01 MTR_3g017490 43.972 141 78 1 121 261 112 251 1.10e-34 129
MsG0480024002.01.T01 MTR_7g106500 41.060 151 82 3 114 259 116 264 1.97e-34 128
MsG0480024002.01.T01 MTR_1g051180 45.113 133 72 1 118 250 203 334 3.52e-34 129
MsG0480024002.01.T01 MTR_8g099665 43.210 162 86 2 113 268 204 365 1.70e-33 127
MsG0480024002.01.T01 MTR_5g083110 45.070 142 75 2 119 260 90 228 2.05e-31 119
MsG0480024002.01.T01 MTR_8g038440 48.413 126 61 2 123 245 105 229 2.91e-31 119
MsG0480024002.01.T01 MTR_3g465550 44.056 143 76 3 120 261 84 223 1.15e-30 116
MsG0480024002.01.T01 MTR_7g090230 39.860 143 84 2 120 261 274 415 1.33e-30 120
MsG0480024002.01.T01 MTR_7g010090 38.075 239 100 7 55 245 152 390 1.69e-30 120
MsG0480024002.01.T01 MTR_6g011640 33.721 258 99 8 60 245 103 360 1.38e-27 112
MsG0480024002.01.T01 MTR_5g072400 39.153 189 109 5 81 268 68 251 3.07e-25 102
MsG0480024002.01.T01 MTR_3g071510 38.519 135 80 2 126 260 93 224 1.99e-23 97.4
MsG0480024002.01.T01 MTR_8g106890 79.630 54 8 1 295 348 9 59 1.25e-21 88.2
MsG0480024002.01.T01 MTR_3g030520 42.975 121 63 2 131 245 142 262 1.93e-19 87.8
MsG0480024002.01.T01 MTR_7g079015 42.045 88 45 2 164 245 1 88 7.96e-13 64.3
MsG0480024002.01.T01 MTR_0034s0110 33.654 104 58 1 238 341 25 117 8.28e-13 64.7
MsG0480024002.01.T01 MTR_5g048870 38.889 90 52 1 116 202 61 150 2.38e-12 64.7
MsG0480024002.01.T01 MTR_2g460920 37.500 80 50 0 265 344 1 80 1.46e-11 62.4
MsG0480024002.01.T01 MTR_1g095960 38.776 98 51 3 168 256 32 129 9.26e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480024002.01.T01 AT4G10630 51.672 329 95 11 1 267 1 327 6.25e-93 281
MsG0480024002.01.T01 AT1G32760 50.323 310 105 12 2 267 3 307 2.73e-71 224
MsG0480024002.01.T01 AT5G03870 41.379 203 103 2 61 261 186 374 2.26e-38 141
MsG0480024002.01.T01 AT1G64500 51.449 138 63 2 114 247 202 339 1.02e-37 139
MsG0480024002.01.T01 AT5G39865 35.622 233 111 6 61 258 140 368 8.48e-37 137
MsG0480024002.01.T01 AT5G06470 48.529 136 66 2 114 249 79 210 1.45e-33 124
MsG0480024002.01.T01 AT5G13810 45.000 140 74 2 106 245 111 247 2.30e-32 122
MsG0480024002.01.T01 AT3G57070 42.361 144 80 2 120 261 264 406 1.76e-31 123
MsG0480024002.01.T01 AT5G01420 42.857 161 82 4 103 259 232 386 2.11e-31 122
MsG0480024002.01.T01 AT5G58530 43.871 155 75 3 116 261 105 256 2.75e-31 119
MsG0480024002.01.T01 AT3G28850 48.120 133 60 3 122 245 249 381 6.11e-31 121
MsG0480024002.01.T01 AT2G41330 44.361 133 72 2 121 252 251 382 2.84e-30 119
MsG0480024002.01.T01 AT3G11773 39.695 131 76 2 126 256 9 136 9.08e-24 95.9
MsG0480024002.01.T01 AT3G11773 42.391 92 50 2 159 250 92 180 3.03e-15 73.9

Find 103 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCAAGAGTTAATGATTTC+AGG 0.178045 4:+92246413 None:intergenic
AGCCATTGGTAATGACATTT+TGG 0.206974 4:+92243007 None:intergenic
TCAAAGCAAGGTTTAGGTTT+AGG 0.267652 4:+92246306 None:intergenic
AAAACCCGGTTCGGCTCTTT+CGG 0.272734 4:-92246282 MsG0480024002.01.T01:CDS
AGATTAGAGGATGAAGAAAT+TGG 0.286302 4:-92242795 MsG0480024002.01.T01:CDS
TTTGTTGGGAGAGGTTCTTC+AGG 0.290766 4:-92245976 MsG0480024002.01.T01:CDS
TAGAACAGCGAAAGACATTT+TGG 0.300845 4:-92242961 MsG0480024002.01.T01:CDS
GATGGTGAGTAAACAGAAAC+AGG 0.351897 4:-92245862 MsG0480024002.01.T01:CDS
TCCATTACAACAAAACCAAC+TGG 0.362194 4:+92242915 None:intergenic
ACCACTTTCTTCTCTCCGTT+CGG 0.362950 4:+92246236 None:intergenic
CCGATCCGAAAGAGCCGAAC+CGG 0.370965 4:+92246277 None:intergenic
ATTCGAGCAGTCTTCATAAA+TGG 0.377624 4:+92242852 None:intergenic
CAAGGTTTAGGTTTAGGTTT+GGG 0.381455 4:+92246312 None:intergenic
ATGTCTTTCGCTGTTCTAGC+TGG 0.398302 4:+92242966 None:intergenic
CACCTGAAATCATTAACTCT+TGG 0.404093 4:-92246415 MsG0480024002.01.T01:CDS
AGGTGCCGAACTCGTCTTCA+TGG 0.405385 4:+92246564 None:intergenic
CAAAACGAAGATGAGATTAG+AGG 0.407539 4:-92242808 MsG0480024002.01.T01:CDS
TCTTTAACTTCCACCACTTA+CGG 0.416969 4:-92246512 MsG0480024002.01.T01:CDS
GGTTGTGGAAGAGGGTTTGT+TGG 0.419535 4:-92245991 MsG0480024002.01.T01:CDS
TTGTTGGGAGAGGTTCTTCA+GGG 0.419600 4:-92245975 MsG0480024002.01.T01:CDS
GCAAGGTTTAGGTTTAGGTT+TGG 0.424192 4:+92246311 None:intergenic
GTTGTGGAAGAGGGTTTGTT+GGG 0.424770 4:-92245990 MsG0480024002.01.T01:CDS
GGAAGAGGGTTTGTTGGGAG+AGG 0.425439 4:-92245985 MsG0480024002.01.T01:CDS
GATGTTGAAGGTTGTGGAAG+AGG 0.428644 4:-92246000 MsG0480024002.01.T01:CDS
GGGTGAGAAGCGGAAGCTTT+CGG 0.431717 4:+92246370 None:intergenic
TTCAGGTGGTTCGGAGCGGA+GGG 0.434145 4:+92246430 None:intergenic
GTTAATGATTTCAGGTGGTT+CGG 0.436171 4:+92246421 None:intergenic
GTGGAGGAGTGGGTGGATCG+AGG 0.437573 4:+92246477 None:intergenic
ACCTGAAATCATTAACTCTT+GGG 0.437778 4:-92246414 MsG0480024002.01.T01:CDS
CGAGAAGATGGTGGAGGAGT+GGG 0.445237 4:+92246467 None:intergenic
ATGTTGAAGGTTGTGGAAGA+GGG 0.449891 4:-92245999 MsG0480024002.01.T01:CDS
CATTAACTCTTGGGAACTCA+TGG 0.451980 4:-92246405 MsG0480024002.01.T01:CDS
TTTGTGAAGGGATACTATAT+TGG 0.456511 4:-92246035 MsG0480024002.01.T01:CDS
GGAGGTGTTTGTGAGGGTTG+CGG 0.462528 4:-92245930 MsG0480024002.01.T01:CDS
TTGATAGATTTATCAGCCAT+TGG 0.473258 4:+92242993 None:intergenic
TTTCAGGTGGTTCGGAGCGG+AGG 0.476568 4:+92246429 None:intergenic
CGTGACGTTTCGATGGATAG+TGG 0.483806 4:-92246116 MsG0480024002.01.T01:CDS
TGGAGGAGTGGGTGGATCGA+GGG 0.499701 4:+92246478 None:intergenic
CCGGTTCGGCTCTTTCGGAT+CGG 0.506227 4:-92246277 MsG0480024002.01.T01:CDS
TTGAACCATGAAGACGAGTT+CGG 0.509241 4:-92246569 MsG0480024002.01.T01:CDS
GTTGGTGGAGGTGTTTGTGA+GGG 0.511209 4:-92245936 MsG0480024002.01.T01:CDS
GACAAATTCCTCTTCCCAGT+TGG 0.511907 4:-92242930 MsG0480024002.01.T01:CDS
CTGCGAGCGTGACGTTTCGA+TGG 0.512099 4:-92246123 MsG0480024002.01.T01:CDS
GTGAAACGAGAAGATGGTGG+AGG 0.513837 4:+92246461 None:intergenic
GTGGGTTTAAAGAGGAACTG+AGG 0.517564 4:-92246097 MsG0480024002.01.T01:CDS
TTGAGAGTGAAACGAGAAGA+TGG 0.519723 4:+92246455 None:intergenic
TGTCTTTCGCTGTTCTAGCT+GGG 0.523177 4:+92242967 None:intergenic
ACTTTCTTCTCTCCGTTCGG+TGG 0.523310 4:+92246239 None:intergenic
GATGGATAGTGGGTTTAAAG+AGG 0.524140 4:-92246105 MsG0480024002.01.T01:CDS
AGGTGTTCGGAGGACATTTG+AGG 0.530160 4:-92246192 MsG0480024002.01.T01:CDS
TGAAGAGATGTTGAAGGTTG+TGG 0.532420 4:-92246006 MsG0480024002.01.T01:CDS
TTGGAAGAAGGGGTGAGAAG+CGG 0.533583 4:+92246360 None:intergenic
CTCTTTCGGATCGGTTTGAG+AGG 0.536689 4:-92246268 MsG0480024002.01.T01:CDS
CAACAAAACCAACTGGGAAG+AGG 0.541539 4:+92242922 None:intergenic
GTGAAGGGATACTATATTGG+CGG 0.545463 4:-92246032 MsG0480024002.01.T01:CDS
GTTTAGGTTTAGGTTTGGGT+CGG 0.549168 4:+92246316 None:intergenic
GTGGATCGAGGGTGTTGAGA+AGG 0.552372 4:+92246489 None:intergenic
TGTTGGTGGAGGTGTTTGTG+AGG 0.554629 4:-92245937 MsG0480024002.01.T01:CDS
CAACAACGTTGAGAGGTGTT+CGG 0.556960 4:-92246205 MsG0480024002.01.T01:CDS
TTGCCAAGAAAAGCTGTTGG+TGG 0.557146 4:-92245951 MsG0480024002.01.T01:CDS
AGCGGAAGCTTTCGGTGTCG+AGG 0.562057 4:+92246378 None:intergenic
GGCACCTCAGCACTCGGTGT+CGG 0.562950 4:-92246548 MsG0480024002.01.T01:CDS
GGTGTTGAGAAGGCCGTAAG+TGG 0.564170 4:+92246499 None:intergenic
CGGTGCTGAAGAGATGTTGA+AGG 0.565844 4:-92246012 MsG0480024002.01.T01:CDS
CCGCCGAGAGTGTTTGTGAA+GGG 0.568180 4:-92246047 MsG0480024002.01.T01:CDS
ATCTATACAACAACGTTGAG+AGG 0.568839 4:-92246212 MsG0480024002.01.T01:CDS
CCAAGAAAAGCTGTTGGTGG+AGG 0.569004 4:-92245948 MsG0480024002.01.T01:CDS
ATGTAACGGAAGCTGTAAGA+TGG 0.570898 4:-92245880 MsG0480024002.01.T01:CDS
GTGACGTTTCGATGGATAGT+GGG 0.575896 4:-92246115 MsG0480024002.01.T01:CDS
TACCAAAATGTCATTACCAA+TGG 0.576155 4:-92243009 MsG0480024002.01.T01:CDS
GAAGATGGTGGAGGAGTGGG+TGG 0.583270 4:+92246470 None:intergenic
GAGTTCGGCACCTCAGCACT+CGG 0.587519 4:-92246554 MsG0480024002.01.T01:CDS
TCCGCCGAGAGTGTTTGTGA+AGG 0.587875 4:-92246048 MsG0480024002.01.T01:CDS
ACGAGAAGATGGTGGAGGAG+TGG 0.589446 4:+92246466 None:intergenic
ATGGTCTTCTCAATATGAGA+GGG 0.591674 4:+92242871 None:intergenic
GTTGAGAAGGCCGTAAGTGG+TGG 0.592261 4:+92246502 None:intergenic
AGAGTGAAACGAGAAGATGG+TGG 0.598146 4:+92246458 None:intergenic
CGATCCGAAAGAGCCGAACC+GGG 0.602068 4:+92246278 None:intergenic
CTTCCGTTACATCGAAAACA+AGG 0.602706 4:+92245891 None:intergenic
TCAGGTGGTTCGGAGCGGAG+GGG 0.606340 4:+92246431 None:intergenic
TATCCCTTCACAAACACTCT+CGG 0.606463 4:+92246044 None:intergenic
CAAGAGTTAATGATTTCAGG+TGG 0.609204 4:+92246416 None:intergenic
AATGGTCTTCTCAATATGAG+AGG 0.617466 4:+92242870 None:intergenic
AACTCTTGGGAACTCATGGA+AGG 0.617874 4:-92246401 MsG0480024002.01.T01:CDS
TGGGTTTAAAGAGGAACTGA+GGG 0.619505 4:-92246096 MsG0480024002.01.T01:CDS
ATGGTGAGTAAACAGAAACA+GGG 0.621676 4:-92245861 MsG0480024002.01.T01:CDS
GGAGCTTCTGAAAGAGAAGA+CGG 0.622205 4:-92246075 MsG0480024002.01.T01:CDS
GGTTTGCCAAGAAAAGCTGT+TGG 0.627797 4:-92245954 MsG0480024002.01.T01:CDS
CCATTACAACAAAACCAACT+GGG 0.640375 4:+92242916 None:intergenic
TGATTTCAGGTGGTTCGGAG+CGG 0.646701 4:+92246426 None:intergenic
TGCTCGAATGATGATTGACA+TGG 0.647093 4:-92242838 MsG0480024002.01.T01:CDS
ATGGACATAAAGGAAGATGA+TGG 0.649590 4:-92242897 MsG0480024002.01.T01:CDS
ACCGAACGGAGAGAAGAAAG+TGG 0.652619 4:-92246237 MsG0480024002.01.T01:CDS
AAGTTAAAGAGACGATGTGG+TGG 0.652944 4:+92246525 None:intergenic
GAGAGGATATGTCCACCGAA+CGG 0.656504 4:-92246251 MsG0480024002.01.T01:CDS
GTGGCCGACACCGAGTGCTG+AGG 0.659050 4:+92246544 None:intergenic
GACATTTGAGGCTTGCAATG+CGG 0.676497 4:-92246180 MsG0480024002.01.T01:CDS
TGGTCTTCTCAATATGAGAG+GGG 0.695059 4:+92242872 None:intergenic
CCCTTCACAAACACTCTCGG+CGG 0.696914 4:+92246047 None:intergenic
CAACGTTGAGAGGTGTTCGG+AGG 0.699173 4:-92246202 MsG0480024002.01.T01:CDS
TGGAAGTTAAAGAGACGATG+TGG 0.732203 4:+92246522 None:intergenic
TGGTGAGTAAACAGAAACAG+GGG 0.736014 4:-92245860 MsG0480024002.01.T01:CDS
GCTTCTGAAAGAGAAGACGG+TGG 0.771527 4:-92246072 MsG0480024002.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAATAAGTTAAG+GGG - Chr4:92244791-92244810 MsG0480024002.01.T01:intron 10.0%
!!! CTTTTTAAGTTTATAAAAAA+GGG + Chr4:92244713-92244732 None:intergenic 10.0%
!!! TCTTTTTAAGTTTATAAAAA+AGG + Chr4:92244714-92244733 None:intergenic 10.0%
!!! TTTTTAAGTTTATAAAAAAG+GGG + Chr4:92244712-92244731 None:intergenic 10.0%
!! AATAAATAAATAAGTTAAGG+GGG - Chr4:92244792-92244811 MsG0480024002.01.T01:intron 15.0%
!! AATTAAATCCAATTTATGAT+AGG - Chr4:92245654-92245673 MsG0480024002.01.T01:intron 15.0%
!! ATAAACTTAAAAAGAAAAAG+AGG - Chr4:92244719-92244738 MsG0480024002.01.T01:intron 15.0%
!!! AAAATATAGAAAAAAGTGTT+TGG + Chr4:92246204-92246223 None:intergenic 15.0%
!!! ATGAGTTATTTAATTTAAGT+GGG + Chr4:92245985-92246004 None:intergenic 15.0%
!!! TATTTTTTATAGAAGATCAT+GGG + Chr4:92245124-92245143 None:intergenic 15.0%
!!! TTATTTTTTATAGAAGATCA+TGG + Chr4:92245125-92245144 None:intergenic 15.0%
!!! TTGAAAAAAACAACATTTTA+CGG - Chr4:92244225-92244244 MsG0480024002.01.T01:intron 15.0%
!!! TTTTAAGTTTATAAAAAAGG+GGG + Chr4:92244711-92244730 None:intergenic 15.0%
!! AATTATGCTAAAGATTATTC+AGG + Chr4:92245312-92245331 None:intergenic 20.0%
!! AGAATTGAAATGAAATTAGA+TGG + Chr4:92245218-92245237 None:intergenic 20.0%
!! ATAGTTCAGAATATAAAAGT+CGG - Chr4:92244675-92244694 MsG0480024002.01.T01:intron 20.0%
!!! AAAGGTTAAAATTTTATTCC+CGG + Chr4:92246228-92246247 None:intergenic 20.0%
!!! ATGACTAATATTTCTAAGTA+AGG - Chr4:92245696-92245715 MsG0480024002.01.T01:intron 20.0%
!!! GATGAGTTATTTAATTTAAG+TGG + Chr4:92245986-92246005 None:intergenic 20.0%
!!! TCATCATTTTATTCACTTTT+TGG - Chr4:92244161-92244180 MsG0480024002.01.T01:intron 20.0%
!!! TGAAAAAAACAACATTTTAC+GGG - Chr4:92244226-92244245 MsG0480024002.01.T01:intron 20.0%
! AAAGTAGCAAGTAATTAACA+AGG - Chr4:92245894-92245913 MsG0480024002.01.T01:CDS 25.0%
! AGATAAAGGAATAAGACTTA+GGG + Chr4:92246308-92246327 None:intergenic 25.0%
! AGTTATGTGGTTTATACAAT+GGG - Chr4:92246065-92246084 MsG0480024002.01.T01:CDS 25.0%
! ATAAGCTAAATGATGCATAA+GGG - Chr4:92245749-92245768 MsG0480024002.01.T01:intron 25.0%
! GAATCATATATTCCTTTGTT+TGG - Chr4:92244861-92244880 MsG0480024002.01.T01:intron 25.0%
! GTAGTGATTGTAATGAAAAT+GGG - Chr4:92243545-92243564 MsG0480024002.01.T01:intron 25.0%
! TAACTAACTAACTACAAAGT+GGG + Chr4:92243582-92243601 None:intergenic 25.0%
! TAATTATAGTGTTTATTCCC+AGG - Chr4:92246098-92246117 MsG0480024002.01.T01:CDS 25.0%
! TAGAAATATTAGTCATAGAG+TGG + Chr4:92245692-92245711 None:intergenic 25.0%
! TAGGTTCATTTGAATATGAA+GGG - Chr4:92245580-92245599 MsG0480024002.01.T01:intron 25.0%
! TAGTTATGTGGTTTATACAA+TGG - Chr4:92246064-92246083 MsG0480024002.01.T01:CDS 25.0%
! TATAAGCTAAATGATGCATA+AGG - Chr4:92245748-92245767 MsG0480024002.01.T01:intron 25.0%
! TGGTTAATTGTTTAATTCCT+GGG + Chr4:92246184-92246203 None:intergenic 25.0%
! TGTAGTGATTGTAATGAAAA+TGG - Chr4:92243544-92243563 MsG0480024002.01.T01:intron 25.0%
! TTAGGTTCATTTGAATATGA+AGG - Chr4:92245579-92245598 MsG0480024002.01.T01:intron 25.0%
! TTGGTTAATTGTTTAATTCC+TGG + Chr4:92246185-92246204 None:intergenic 25.0%
!! AAGGTTAAAATTTTATTCCC+GGG + Chr4:92246227-92246246 None:intergenic 25.0%
!! GAAAAAAACAACATTTTACG+GGG - Chr4:92244227-92244246 MsG0480024002.01.T01:intron 25.0%
!! GGTATTTTATTGAAGATCAT+GGG + Chr4:92245043-92245062 None:intergenic 25.0%
!! TAATCATTGAAAAGTGTGTT+AGG - Chr4:92245486-92245505 MsG0480024002.01.T01:intron 25.0%
!! TGGTATTTTATTGAAGATCA+TGG + Chr4:92245044-92245063 None:intergenic 25.0%
!!! AAAGCATTAACTGTAGTTTT+AGG - Chr4:92245561-92245580 MsG0480024002.01.T01:intron 25.0%
!!! ACTTTTTTCTATATTTTCCC+GGG - Chr4:92246207-92246226 MsG0480024002.01.T01:CDS 25.0%
!!! CACTTTTTTCTATATTTTCC+CGG - Chr4:92246206-92246225 MsG0480024002.01.T01:CDS 25.0%
!!! CTTTTTTGAAAATAGTTCCA+AGG + Chr4:92246159-92246178 None:intergenic 25.0%
!!! TGTTGTTTTTTTCAAGTTGT+AGG + Chr4:92244220-92244239 None:intergenic 25.0%
!!! TTTTGTTGTAATGGACATAA+AGG - Chr4:92246456-92246475 MsG0480024002.01.T01:CDS 25.0%
AATCAGAGAAAAAGAATAGC+GGG + Chr4:92245084-92245103 None:intergenic 30.0%
ACCAAATCTATGTTGAGTAA+TGG + Chr4:92245242-92245261 None:intergenic 30.0%
ACCTGAAATCATTAACTCTT+GGG - Chr4:92242949-92242968 MsG0480024002.01.T01:CDS 30.0%
ACGTTTGAGTAAACAGATAA+AGG + Chr4:92246322-92246341 None:intergenic 30.0%
AGATTAGAGGATGAAGAAAT+TGG - Chr4:92246568-92246587 MsG0480024002.01.T01:CDS 30.0%
AGATTGAGAAGAACATTTCT+GGG + Chr4:92245455-92245474 None:intergenic 30.0%
AGGTTACAAAATTTATTCCC+AGG + Chr4:92246272-92246291 None:intergenic 30.0%
AGGTTCATTTGAATATGAAG+GGG - Chr4:92245581-92245600 MsG0480024002.01.T01:intron 30.0%
ATAAAGGAATAAGACTTAGG+GGG + Chr4:92246306-92246325 None:intergenic 30.0%
ATATATATAAACCACACTCC+TGG + Chr4:92243954-92243973 None:intergenic 30.0%
ATTTATGATAGGTTTCACTC+AGG - Chr4:92245665-92245684 MsG0480024002.01.T01:intron 30.0%
CAGATAAAGGAATAAGACTT+AGG + Chr4:92246309-92246328 None:intergenic 30.0%
CATCTAATTAAAACACAAGC+AGG - Chr4:92244259-92244278 MsG0480024002.01.T01:intron 30.0%
CATGAATTGATTGAACTTGT+TGG - Chr4:92245920-92245939 MsG0480024002.01.T01:CDS 30.0%
CTAACTAACTAACTACAAAG+TGG + Chr4:92243583-92243602 None:intergenic 30.0%
CTATCTCATGGGAATAAAAA+GGG + Chr4:92244989-92245008 None:intergenic 30.0%
CTGTGATCATGAACATAAAT+TGG + Chr4:92243827-92243846 None:intergenic 30.0%
CTTCATTGTTGAACTTGAAT+GGG - Chr4:92243850-92243869 MsG0480024002.01.T01:intron 30.0%
GAATAAAAAGGGTGGAAAAT+GGG + Chr4:92244978-92244997 None:intergenic 30.0%
GAATCAGAGAAAAAGAATAG+CGG + Chr4:92245085-92245104 None:intergenic 30.0%
GAGTGAAACCTATCATAAAT+TGG + Chr4:92245665-92245684 None:intergenic 30.0%
GATAAAGGAATAAGACTTAG+GGG + Chr4:92246307-92246326 None:intergenic 30.0%
GCATGATCAAATCAACTTTA+AGG - Chr4:92245942-92245961 MsG0480024002.01.T01:CDS 30.0%
GGTTAACTATAATGTTAGCA+AGG - Chr4:92243877-92243896 MsG0480024002.01.T01:intron 30.0%
GTTATGTGGTTTATACAATG+GGG - Chr4:92246066-92246085 MsG0480024002.01.T01:CDS 30.0%
TAACTATAATGTTAGCAAGG+AGG - Chr4:92243880-92243899 MsG0480024002.01.T01:intron 30.0%
TAAGCTAAATGATGCATAAG+GGG - Chr4:92245750-92245769 MsG0480024002.01.T01:intron 30.0%
TACCAAAATGTCATTACCAA+TGG - Chr4:92246354-92246373 MsG0480024002.01.T01:CDS 30.0%
TAGATTGAGAAGAACATTTC+TGG + Chr4:92245456-92245475 None:intergenic 30.0%
TCATGGGTGAAAATATTTAG+CGG + Chr4:92245108-92245127 None:intergenic 30.0%
TCCATTACTCAACATAGATT+TGG - Chr4:92245238-92245257 MsG0480024002.01.T01:intron 30.0%
TCTTCATTGTTGAACTTGAA+TGG - Chr4:92243849-92243868 MsG0480024002.01.T01:intron 30.0%
TTATGTGGTTTATACAATGG+GGG - Chr4:92246067-92246086 MsG0480024002.01.T01:CDS 30.0%
TTCATTGTTGAACTTGAATG+GGG - Chr4:92243851-92243870 MsG0480024002.01.T01:intron 30.0%
TTGATAGATTTATCAGCCAT+TGG + Chr4:92246373-92246392 None:intergenic 30.0%
TTTGTGAAGGGATACTATAT+TGG - Chr4:92243328-92243347 MsG0480024002.01.T01:intron 30.0%
! AATTGGATTTTTCTCCACAA+AGG + Chr4:92243810-92243829 None:intergenic 30.0%
! ATATTCCTTTGTTTGGTAGA+TGG - Chr4:92244868-92244887 MsG0480024002.01.T01:intron 30.0%
! CTATTTTCAAAAAAGTTCCC+AGG - Chr4:92246164-92246183 MsG0480024002.01.T01:CDS 30.0%
! GAAGTACTTATCCAAAAACT+TGG + Chr4:92244355-92244374 None:intergenic 30.0%
! GAATGTTGATAAATGAAGAC+TGG - Chr4:92244025-92244044 MsG0480024002.01.T01:intron 30.0%
! GATTAGTTGCAACTTACAAA+AGG + Chr4:92243740-92243759 None:intergenic 30.0%
! GCTTATTCATACAATGCTTT+TGG - Chr4:92244192-92244211 MsG0480024002.01.T01:intron 30.0%
! TATTCCTTTGTTTGGTAGAT+GGG - Chr4:92244869-92244888 MsG0480024002.01.T01:intron 30.0%
! TCAAATCAACTTTAAGGATC+TGG - Chr4:92245948-92245967 MsG0480024002.01.T01:CDS 30.0%
! TCATACATCATGACATCTTT+TGG + Chr4:92244654-92244673 None:intergenic 30.0%
! TCATCAACTGTTTGCTAATT+GGG - Chr4:92245163-92245182 MsG0480024002.01.T01:intron 30.0%
! TTCATCAACTGTTTGCTAAT+TGG - Chr4:92245162-92245181 MsG0480024002.01.T01:intron 30.0%
! TTTTCTTTGTTGGATGGTTT+TGG + Chr4:92243025-92243044 None:intergenic 30.0%
!! AATTTTAACCTTTACACTCC+TGG - Chr4:92246235-92246254 MsG0480024002.01.T01:CDS 30.0%
!! ATTTTAACCTTTACACTCCT+GGG - Chr4:92246236-92246255 MsG0480024002.01.T01:CDS 30.0%
!! GCAAGAAACAAGCTTATTTT+TGG + Chr4:92245370-92245389 None:intergenic 30.0%
!! TTATGTTTGGTGCACAATTA+AGG + Chr4:92243786-92243805 None:intergenic 30.0%
!!! GTTTTTTCAAAGCAAGGTTT+AGG + Chr4:92243066-92243085 None:intergenic 30.0%
AAACCACATAACTATACTCG+TGG + Chr4:92246058-92246077 None:intergenic 35.0%
AAGCTAAATGATGCATAAGG+GGG - Chr4:92245751-92245770 MsG0480024002.01.T01:intron 35.0%
AATGGTCTTCTCAATATGAG+AGG + Chr4:92246496-92246515 None:intergenic 35.0%
ACGATGGATCTAATGCTTAA+TGG + Chr4:92245777-92245796 None:intergenic 35.0%
AGGAACAGGTAAAATACGTT+TGG + Chr4:92246139-92246158 None:intergenic 35.0%
ATCTATACAACAACGTTGAG+AGG - Chr4:92243151-92243170 MsG0480024002.01.T01:intron 35.0%
ATGGACATAAAGGAAGATGA+TGG - Chr4:92246466-92246485 MsG0480024002.01.T01:CDS 35.0%
ATGGTCTTCTCAATATGAGA+GGG + Chr4:92246495-92246514 None:intergenic 35.0%
ATGGTGAGTAAACAGAAACA+GGG - Chr4:92243502-92243521 MsG0480024002.01.T01:intron 35.0%
ATTCGAGCAGTCTTCATAAA+TGG + Chr4:92246514-92246533 None:intergenic 35.0%
CAAAACGAAGATGAGATTAG+AGG - Chr4:92246555-92246574 MsG0480024002.01.T01:CDS 35.0%
CAAGAGTTAATGATTTCAGG+TGG + Chr4:92242950-92242969 None:intergenic 35.0%
CACCTGAAATCATTAACTCT+TGG - Chr4:92242948-92242967 MsG0480024002.01.T01:CDS 35.0%
CATGGGTGAAAATATTTAGC+GGG + Chr4:92245107-92245126 None:intergenic 35.0%
CATTCTTAGTGTTCAACTCT+TGG + Chr4:92244405-92244424 None:intergenic 35.0%
CCATTACAACAAAACCAACT+GGG + Chr4:92246450-92246469 None:intergenic 35.0%
GCTATCTCATGGGAATAAAA+AGG + Chr4:92244990-92245009 None:intergenic 35.0%
GGAAGCAAAATACTCAAGAA+GGG + Chr4:92245434-92245453 None:intergenic 35.0%
GGAATAAAAAGGGTGGAAAA+TGG + Chr4:92244979-92244998 None:intergenic 35.0%
TAGATCCATCGTACATAGTT+GGG - Chr4:92245785-92245804 MsG0480024002.01.T01:intron 35.0%
TATTCCTGGTCATATTTGAG+TGG + Chr4:92244897-92244916 None:intergenic 35.0%
TCATTGTTGAACTTGAATGG+GGG - Chr4:92243852-92243871 MsG0480024002.01.T01:intron 35.0%
TCCATTACAACAAAACCAAC+TGG + Chr4:92246451-92246470 None:intergenic 35.0%
TCCCAAGAGTTAATGATTTC+AGG + Chr4:92242953-92242972 None:intergenic 35.0%
TCTCCACAAAGGATTATGTT+TGG + Chr4:92243799-92243818 None:intergenic 35.0%
TCTTGAAGGAAACTTCTGTT+TGG - Chr4:92244051-92244070 MsG0480024002.01.T01:intron 35.0%
TGAAAATAGTTCCAAGGAAC+AGG + Chr4:92246153-92246172 None:intergenic 35.0%
TGATTTCACTCTTCTCTTCA+AGG - Chr4:92245190-92245209 MsG0480024002.01.T01:intron 35.0%
TTAGATCCATCGTACATAGT+TGG - Chr4:92245784-92245803 MsG0480024002.01.T01:intron 35.0%
TTATTCCCATGAGATAGCTT+GGG - Chr4:92244992-92245011 MsG0480024002.01.T01:intron 35.0%
TTGCAACTTACAAAAGGACA+AGG + Chr4:92243734-92243753 None:intergenic 35.0%
TTTATTCCCATGAGATAGCT+TGG - Chr4:92244991-92245010 MsG0480024002.01.T01:intron 35.0%
! AACGTATTTTACCTGTTCCT+TGG - Chr4:92246139-92246158 MsG0480024002.01.T01:CDS 35.0%
! ATTCCTTTGTTTGGTAGATG+GGG - Chr4:92244870-92244889 MsG0480024002.01.T01:intron 35.0%
! CAAGGTTTAGGTTTAGGTTT+GGG + Chr4:92243054-92243073 None:intergenic 35.0%
! CATCAACTGTTTGCTAATTG+GGG - Chr4:92245164-92245183 MsG0480024002.01.T01:intron 35.0%
! CTTCAATGTCTTTTGTCACT+AGG + Chr4:92244761-92244780 None:intergenic 35.0%
! GCTACTTTGCAGAATTGTAT+AGG + Chr4:92245882-92245901 None:intergenic 35.0%
! GTTAATGATTTCAGGTGGTT+CGG + Chr4:92242945-92242964 None:intergenic 35.0%
! TAGAACAGCGAAAGACATTT+TGG - Chr4:92246402-92246421 MsG0480024002.01.T01:CDS 35.0%
! TCAAAGCAAGGTTTAGGTTT+AGG + Chr4:92243060-92243079 None:intergenic 35.0%
! TCATTGAAAAGTGTGTTAGG+TGG - Chr4:92245489-92245508 MsG0480024002.01.T01:intron 35.0%
! TCTTTAACTTCCACCACTTA+CGG - Chr4:92242851-92242870 MsG0480024002.01.T01:CDS 35.0%
!! AACCTTGCTTTGAAAAAACC+CGG - Chr4:92243067-92243086 MsG0480024002.01.T01:intron 35.0%
!!! AGCCATTGGTAATGACATTT+TGG + Chr4:92246359-92246378 None:intergenic 35.0%
!!! TTGCCTTGTTTTCGATGTAA+CGG - Chr4:92243469-92243488 MsG0480024002.01.T01:intron 35.0%
AAAGAGAGTAAGCAGTGAAG+TGG + Chr4:92245723-92245742 None:intergenic 40.0%
AACTTACCCAAGCTATCTCA+TGG + Chr4:92245001-92245020 None:intergenic 40.0%
AAGTTAAAGAGACGATGTGG+TGG + Chr4:92242841-92242860 None:intergenic 40.0%
ACTTACCCAAGCTATCTCAT+GGG + Chr4:92245000-92245019 None:intergenic 40.0%
AGATCCATCGTACATAGTTG+GGG - Chr4:92245786-92245805 MsG0480024002.01.T01:intron 40.0%
ATGAAGACTGGTGATCTTGA+AGG - Chr4:92244037-92244056 MsG0480024002.01.T01:intron 40.0%
ATGCGCATTTGATGCTATGA+TGG + Chr4:92245856-92245875 None:intergenic 40.0%
ATGTTGAAGGTTGTGGAAGA+GGG - Chr4:92243364-92243383 MsG0480024002.01.T01:intron 40.0%
CAACCACGAGTATAGTTATG+TGG - Chr4:92246052-92246071 MsG0480024002.01.T01:CDS 40.0%
CAACTTACAAAAGGACAAGG+AGG + Chr4:92243731-92243750 None:intergenic 40.0%
CAAGAGCTAAACACTAAGGA+GGG + Chr4:92244329-92244348 None:intergenic 40.0%
CACATAACTATACTCGTGGT+TGG + Chr4:92246054-92246073 None:intergenic 40.0%
CATTAACTCTTGGGAACTCA+TGG - Chr4:92242958-92242977 MsG0480024002.01.T01:CDS 40.0%
CTTCCGTTACATCGAAAACA+AGG + Chr4:92243475-92243494 None:intergenic 40.0%
GAACCAAGAGCTAAACACTA+AGG + Chr4:92244333-92244352 None:intergenic 40.0%
GATGAACACACAATGAGCAT+GGG + Chr4:92245148-92245167 None:intergenic 40.0%
GATGGTGAGTAAACAGAAAC+AGG - Chr4:92243501-92243520 MsG0480024002.01.T01:intron 40.0%
GCACCAAACATAATCCTTTG+TGG - Chr4:92243793-92243812 MsG0480024002.01.T01:intron 40.0%
GGGAAGCAAAATACTCAAGA+AGG + Chr4:92245435-92245454 None:intergenic 40.0%
GGGTTAGAAAAATAGTTCCC+AGG - Chr4:92244826-92244845 MsG0480024002.01.T01:intron 40.0%
GTAAGTTTGATTCCCAGGAA+AGG - Chr4:92245014-92245033 MsG0480024002.01.T01:intron 40.0%
GTGAAGGGATACTATATTGG+CGG - Chr4:92243331-92243350 MsG0480024002.01.T01:intron 40.0%
TATCCCTTCACAAACACTCT+CGG + Chr4:92243322-92243341 None:intergenic 40.0%
TCCTGGGAAAATTGTATTCC+TGG + Chr4:92244911-92244930 None:intergenic 40.0%
TCTCATGGGAATAAAAAGGG+TGG + Chr4:92244986-92245005 None:intergenic 40.0%
TGAAGAGATGTTGAAGGTTG+TGG - Chr4:92243357-92243376 MsG0480024002.01.T01:intron 40.0%
TGATGAACACACAATGAGCA+TGG + Chr4:92245149-92245168 None:intergenic 40.0%
TGCTCGAATGATGATTGACA+TGG - Chr4:92246525-92246544 MsG0480024002.01.T01:CDS 40.0%
TGGAAGTTAAAGAGACGATG+TGG + Chr4:92242844-92242863 None:intergenic 40.0%
TGGGTTTAAAGAGGAACTGA+GGG - Chr4:92243267-92243286 MsG0480024002.01.T01:intron 40.0%
TGGTCTTCTCAATATGAGAG+GGG + Chr4:92246494-92246513 None:intergenic 40.0%
TGGTGAGTAAACAGAAACAG+GGG - Chr4:92243503-92243522 MsG0480024002.01.T01:intron 40.0%
TTATCCCCAACTATGTACGA+TGG + Chr4:92245793-92245812 None:intergenic 40.0%
TTGAACCATGAAGACGAGTT+CGG - Chr4:92242794-92242813 MsG0480024002.01.T01:CDS 40.0%
TTGAGAGTGAAACGAGAAGA+TGG + Chr4:92242911-92242930 None:intergenic 40.0%
! AAAGAATAGCGGGAATGACA+AGG + Chr4:92245074-92245093 None:intergenic 40.0%
! AAGAATAGCGGGAATGACAA+GGG + Chr4:92245073-92245092 None:intergenic 40.0%
! ACCAGGAATACAATTTTCCC+AGG - Chr4:92244907-92244926 MsG0480024002.01.T01:intron 40.0%
! AGAGCAGCTTTTGATGCATT+TGG - Chr4:92243208-92243227 MsG0480024002.01.T01:intron 40.0%
! AGCTCTTGGTTCCAAGTTTT+TGG - Chr4:92244341-92244360 MsG0480024002.01.T01:intron 40.0%
! ATGTAACGGAAGCTGTAAGA+TGG - Chr4:92243483-92243502 MsG0480024002.01.T01:intron 40.0%
! GCAAGGTTTAGGTTTAGGTT+TGG + Chr4:92243055-92243074 None:intergenic 40.0%
! GTTTAGGTTTAGGTTTGGGT+CGG + Chr4:92243050-92243069 None:intergenic 40.0%
!! GATGGATAGTGGGTTTAAAG+AGG - Chr4:92243258-92243277 MsG0480024002.01.T01:intron 40.0%
!! GATTCCAGCTTTAGATTCCT+GGG + Chr4:92244846-92244865 None:intergenic 40.0%
!! TCGGTGTTTTCTTTGTTGGA+TGG + Chr4:92243031-92243050 None:intergenic 40.0%
!! TGATTCCAGCTTTAGATTCC+TGG + Chr4:92244847-92244866 None:intergenic 40.0%
!! TGCTTTGAAAAAACCCGGTT+CGG - Chr4:92243072-92243091 MsG0480024002.01.T01:intron 40.0%
!! TTAAGGGGGTGTTTGTTTGA+GGG - Chr4:92244806-92244825 MsG0480024002.01.T01:intron 40.0%
!!! AACCGGGTTTTTTCAAAGCA+AGG + Chr4:92243072-92243091 None:intergenic 40.0%
!!! CCCAGTTGGTTTTGTTGTAA+TGG - Chr4:92246447-92246466 MsG0480024002.01.T01:CDS 40.0%
!!! GTTGGATGGTTTTGGAAGAA+GGG + Chr4:92243017-92243036 None:intergenic 40.0%
!!! TGTTGGATGGTTTTGGAAGA+AGG + Chr4:92243018-92243037 None:intergenic 40.0%
!!! TTGGATGGTTTTGGAAGAAG+GGG + Chr4:92243016-92243035 None:intergenic 40.0%
AAACACAAGCAGGAATGTGC+AGG - Chr4:92244269-92244288 MsG0480024002.01.T01:intron 45.0%
AACTCTTGGGAACTCATGGA+AGG - Chr4:92242962-92242981 MsG0480024002.01.T01:CDS 45.0%
ACCACTTTCTTCTCTCCGTT+CGG + Chr4:92243130-92243149 None:intergenic 45.0%
AGAAGGAGAGTCATCAGGAA+TGG + Chr4:92243983-92244002 None:intergenic 45.0%
AGAGTGAAACGAGAAGATGG+TGG + Chr4:92242908-92242927 None:intergenic 45.0%
AGATCATGGGTATCCTTTCC+TGG + Chr4:92245030-92245049 None:intergenic 45.0%
ATGACTCTCCTTCTGTCACA+TGG - Chr4:92243989-92244008 MsG0480024002.01.T01:intron 45.0%
ATGTCTTTCGCTGTTCTAGC+TGG + Chr4:92246400-92246419 None:intergenic 45.0%
CAACAAAACCAACTGGGAAG+AGG + Chr4:92246444-92246463 None:intergenic 45.0%
CCAAGAGCTAAACACTAAGG+AGG + Chr4:92244330-92244349 None:intergenic 45.0%
CTCTTGGCTCAAAGTGTACT+CGG + Chr4:92244389-92244408 None:intergenic 45.0%
CTTGGGTAAGTTTGATTCCC+AGG - Chr4:92245009-92245028 MsG0480024002.01.T01:intron 45.0%
GACAAATTCCTCTTCCCAGT+TGG - Chr4:92246433-92246452 MsG0480024002.01.T01:CDS 45.0%
GATCATGGGTATCCTTTCCT+GGG + Chr4:92245029-92245048 None:intergenic 45.0%
GATGTTGAAGGTTGTGGAAG+AGG - Chr4:92243363-92243382 MsG0480024002.01.T01:intron 45.0%
GCACTTTACCATGTGACAGA+AGG + Chr4:92244000-92244019 None:intergenic 45.0%
GGTTTGCCAAGAAAAGCTGT+TGG - Chr4:92243409-92243428 MsG0480024002.01.T01:intron 45.0%
GGTTTGCGATGTAGAATCCT+GGG + Chr4:92246118-92246137 None:intergenic 45.0%
GTGACGTTTCGATGGATAGT+GGG - Chr4:92243248-92243267 MsG0480024002.01.T01:intron 45.0%
GTGGGTAGATTGTGTTTCCT+GGG + Chr4:92244927-92244946 None:intergenic 45.0%
GTGGGTTTAAAGAGGAACTG+AGG - Chr4:92243266-92243285 MsG0480024002.01.T01:intron 45.0%
TCAAAGTGTACTCGGAAGGA+AGG + Chr4:92244381-92244400 None:intergenic 45.0%
TGTTGAACTTGAATGGGGGT+TGG - Chr4:92243856-92243875 MsG0480024002.01.T01:intron 45.0%
TTGCCAAGAAAAGCTGTTGG+TGG - Chr4:92243412-92243431 MsG0480024002.01.T01:intron 45.0%
TTGTTGGGAGAGGTTCTTCA+GGG - Chr4:92243388-92243407 MsG0480024002.01.T01:intron 45.0%
TTTGTTGGGAGAGGTTCTTC+AGG - Chr4:92243387-92243406 MsG0480024002.01.T01:intron 45.0%
! AGTTCCCAGGAATCTAAAGC+TGG - Chr4:92244839-92244858 MsG0480024002.01.T01:intron 45.0%
! CAACTTTCCCAGGAGTGTAA+AGG + Chr4:92246246-92246265 None:intergenic 45.0%
! GACATTTGAGGCTTGCAATG+CGG - Chr4:92243183-92243202 MsG0480024002.01.T01:intron 45.0%
! GGAGCTTCTGAAAGAGAAGA+CGG - Chr4:92243288-92243307 MsG0480024002.01.T01:intron 45.0%
! GTTGTGGAAGAGGGTTTGTT+GGG - Chr4:92243373-92243392 MsG0480024002.01.T01:intron 45.0%
! TGGTTTGCGATGTAGAATCC+TGG + Chr4:92246119-92246138 None:intergenic 45.0%
! TGTCTTTCGCTGTTCTAGCT+GGG + Chr4:92246399-92246418 None:intergenic 45.0%
!! CAACAACGTTGAGAGGTGTT+CGG - Chr4:92243158-92243177 MsG0480024002.01.T01:intron 45.0%
!! CCTCCTTAGTGTTTAGCTCT+TGG - Chr4:92244327-92244346 MsG0480024002.01.T01:intron 45.0%
!! GTGGAAAATGGGTTGAACGT+GGG + Chr4:92244967-92244986 None:intergenic 45.0%
!! GTTAAGGGGGTGTTTGTTTG+AGG - Chr4:92244805-92244824 MsG0480024002.01.T01:intron 45.0%
!! TCCTGGGAAAGTTGATACCT+GGG - Chr4:92246252-92246271 MsG0480024002.01.T01:CDS 45.0%
!! TGGAAAATGGGTTGAACGTG+GGG + Chr4:92244966-92244985 None:intergenic 45.0%
!! TGGGTCGGTGTTTTCTTTGT+TGG + Chr4:92243035-92243054 None:intergenic 45.0%
!! AAAATAAATAAATAAGTTAA+GGG - Chr4:92244790-92244809 MsG0480024002.01.T01:intron 5.0%
!! TAAAATAAATAAATAAGTTA+AGG - Chr4:92244789-92244808 MsG0480024002.01.T01:intron 5.0%
ACCGAACGGAGAGAAGAAAG+TGG - Chr4:92243126-92243145 MsG0480024002.01.T01:intron 50.0%
ACTTTCTTCTCTCCGTTCGG+TGG + Chr4:92243127-92243146 None:intergenic 50.0%
AGGTGTTCGGAGGACATTTG+AGG - Chr4:92243171-92243190 MsG0480024002.01.T01:intron 50.0%
AGTGTACTCGGAAGGAAGGA+AGG + Chr4:92244377-92244396 None:intergenic 50.0%
ATAAACCACACTCCTGGTCC+TGG + Chr4:92243948-92243967 None:intergenic 50.0%
ATCCTCCACAGAGACAATCC+AGG - Chr4:92243927-92243946 MsG0480024002.01.T01:intron 50.0%
CACTAAGGAGGGTAGAGAGA+AGG + Chr4:92244318-92244337 None:intergenic 50.0%
CGTGACGTTTCGATGGATAG+TGG - Chr4:92243247-92243266 MsG0480024002.01.T01:intron 50.0%
CGTGGGTAGATTGTGTTTCC+TGG + Chr4:92244928-92244947 None:intergenic 50.0%
GAGAGGATATGTCCACCGAA+CGG - Chr4:92243112-92243131 MsG0480024002.01.T01:intron 50.0%
GGGAATGACAAGGGTAGAGA+TGG + Chr4:92245064-92245083 None:intergenic 50.0%
GGGACCACTCAAATATGACC+AGG - Chr4:92244890-92244909 MsG0480024002.01.T01:intron 50.0%
GGTCCCCATCTACCAAACAA+AGG + Chr4:92244876-92244895 None:intergenic 50.0%
GGTTGTGGAAGAGGGTTTGT+TGG - Chr4:92243372-92243391 MsG0480024002.01.T01:intron 50.0%
GTGACAGAAGGAGAGTCATC+AGG + Chr4:92243988-92244007 None:intergenic 50.0%
GTTGAACGTGGGGGAGAATT+GGG + Chr4:92244956-92244975 None:intergenic 50.0%
TCCCAGGTATCAACTTTCCC+AGG + Chr4:92246256-92246275 None:intergenic 50.0%
TGGCTCAAAGTGTACTCGGA+AGG + Chr4:92244385-92244404 None:intergenic 50.0%
TTGAACGTGGGGGAGAATTG+GGG + Chr4:92244955-92244974 None:intergenic 50.0%
TTGGAAGAAGGGGTGAGAAG+CGG + Chr4:92243006-92243025 None:intergenic 50.0%
! CCAAGAAAAGCTGTTGGTGG+AGG - Chr4:92243415-92243434 MsG0480024002.01.T01:intron 50.0%
! CCTCCACCAACAGCTTTTCT+TGG + Chr4:92243418-92243437 None:intergenic 50.0%
! CGGTGCTGAAGAGATGTTGA+AGG - Chr4:92243351-92243370 MsG0480024002.01.T01:intron 50.0%
! GCTTCTGAAAGAGAAGACGG+TGG - Chr4:92243291-92243310 MsG0480024002.01.T01:intron 50.0%
! GTGAAACGAGAAGATGGTGG+AGG + Chr4:92242905-92242924 None:intergenic 50.0%
! TGATTTCAGGTGGTTCGGAG+CGG + Chr4:92242940-92242959 None:intergenic 50.0%
!! AAAACCCGGTTCGGCTCTTT+CGG - Chr4:92243081-92243100 MsG0480024002.01.T01:intron 50.0%
!! CTCCTGGGAAAGTTGATACC+TGG - Chr4:92246251-92246270 MsG0480024002.01.T01:CDS 50.0%
!! CTCTTTCGGATCGGTTTGAG+AGG - Chr4:92243095-92243114 MsG0480024002.01.T01:intron 50.0%
!! CTTAGGGGGCGTTTGTTTGA+AGG + Chr4:92246292-92246311 None:intergenic 50.0%
!! GGAAAATGGGTTGAACGTGG+GGG + Chr4:92244965-92244984 None:intergenic 50.0%
!! GGTGGAAAATGGGTTGAACG+TGG + Chr4:92244968-92244987 None:intergenic 50.0%
!! GTTGGTGGAGGTGTTTGTGA+GGG - Chr4:92243427-92243446 MsG0480024002.01.T01:intron 50.0%
!! TGTTGGTGGAGGTGTTTGTG+AGG - Chr4:92243426-92243445 MsG0480024002.01.T01:intron 50.0%
ACAATCCAGGACCAGGAGTG+TGG - Chr4:92243940-92243959 MsG0480024002.01.T01:intron 55.0%
CACAGAGACAATCCAGGACC+AGG - Chr4:92243933-92243952 MsG0480024002.01.T01:intron 55.0%
CCCTTCACAAACACTCTCGG+CGG + Chr4:92243319-92243338 None:intergenic 55.0%
CTGGTCCTGGATTGTCTCTG+TGG + Chr4:92243935-92243954 None:intergenic 55.0%
GGGAGAATTGGGGAGAACGT+GGG + Chr4:92244945-92244964 None:intergenic 55.0%
GGGTGAGAAGCGGAAGCTTT+CGG + Chr4:92242996-92243015 None:intergenic 55.0%
GGTTGAACGTGGGGGAGAAT+TGG + Chr4:92244957-92244976 None:intergenic 55.0%
GTCCTGGATTGTCTCTGTGG+AGG + Chr4:92243932-92243951 None:intergenic 55.0%
GTTGAGAAGGCCGTAAGTGG+TGG + Chr4:92242864-92242883 None:intergenic 55.0%
! GGTGTTGAGAAGGCCGTAAG+TGG + Chr4:92242867-92242886 None:intergenic 55.0%
!! ACGAGAAGATGGTGGAGGAG+TGG + Chr4:92242900-92242919 None:intergenic 55.0%
!! AGGTGCCGAACTCGTCTTCA+TGG + Chr4:92242802-92242821 None:intergenic 55.0%
!! CAACGTTGAGAGGTGTTCGG+AGG - Chr4:92243161-92243180 MsG0480024002.01.T01:intron 55.0%
!! CCGCCGAGAGTGTTTGTGAA+GGG - Chr4:92243316-92243335 MsG0480024002.01.T01:intron 55.0%
!! CGAGAAGATGGTGGAGGAGT+GGG + Chr4:92242899-92242918 None:intergenic 55.0%
!! GGAAGAGGGTTTGTTGGGAG+AGG - Chr4:92243378-92243397 MsG0480024002.01.T01:intron 55.0%
!! GGAGGTGTTTGTGAGGGTTG+CGG - Chr4:92243433-92243452 MsG0480024002.01.T01:intron 55.0%
!! GTGGATCGAGGGTGTTGAGA+AGG + Chr4:92242877-92242896 None:intergenic 55.0%
!! TCCGCCGAGAGTGTTTGTGA+AGG - Chr4:92243315-92243334 MsG0480024002.01.T01:intron 55.0%
CCGATCCGAAAGAGCCGAAC+CGG + Chr4:92243089-92243108 None:intergenic 60.0%
CGATCCGAAAGAGCCGAACC+GGG + Chr4:92243088-92243107 None:intergenic 60.0%
CTGCGAGCGTGACGTTTCGA+TGG - Chr4:92243240-92243259 MsG0480024002.01.T01:intron 60.0%
GAGTTCGGCACCTCAGCACT+CGG - Chr4:92242809-92242828 MsG0480024002.01.T01:CDS 60.0%
GGGGAGAATTGGGGAGAACG+TGG + Chr4:92244946-92244965 None:intergenic 60.0%
TGGAGGAGTGGGTGGATCGA+GGG + Chr4:92242888-92242907 None:intergenic 60.0%
! TTCAGGTGGTTCGGAGCGGA+GGG + Chr4:92242936-92242955 None:intergenic 60.0%
! TTTCAGGTGGTTCGGAGCGG+AGG + Chr4:92242937-92242956 None:intergenic 60.0%
!! AGCGGAAGCTTTCGGTGTCG+AGG + Chr4:92242988-92243007 None:intergenic 60.0%
!! CCGGTTCGGCTCTTTCGGAT+CGG - Chr4:92243086-92243105 MsG0480024002.01.T01:intron 60.0%
!! GAAGATGGTGGAGGAGTGGG+TGG + Chr4:92242896-92242915 None:intergenic 60.0%
GTGGAGGAGTGGGTGGATCG+AGG + Chr4:92242889-92242908 None:intergenic 65.0%
! TCAGGTGGTTCGGAGCGGAG+GGG + Chr4:92242935-92242954 None:intergenic 65.0%
!! GGCACCTCAGCACTCGGTGT+CGG - Chr4:92242815-92242834 MsG0480024002.01.T01:CDS 65.0%
! GTGGCCGACACCGAGTGCTG+AGG + Chr4:92242822-92242841 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 92242770 92246615 92242770 ID=MsG0480024002.01;Name=MsG0480024002.01
Chr4 mRNA 92242770 92246615 92242770 ID=MsG0480024002.01.T01;Parent=MsG0480024002.01;Name=MsG0480024002.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|1|1|2|0|348
Chr4 exon 92245832 92246615 92245832 ID=MsG0480024002.01.T01:exon:34061;Parent=MsG0480024002.01.T01
Chr4 exon 92242770 92243032 92242770 ID=MsG0480024002.01.T01:exon:34060;Parent=MsG0480024002.01.T01
Chr4 CDS 92245832 92246615 92245832 ID=MsG0480024002.01.T01:cds;Parent=MsG0480024002.01.T01
Chr4 CDS 92242770 92243032 92242770 ID=MsG0480024002.01.T01:cds;Parent=MsG0480024002.01.T01
Gene Sequence

>MsG0480024002.01.T01

ATGGGCTGCGTGTCTTCACATCTGTTGAACCATGAAGACGAGTTCGGCACCTCAGCACTCGGTGTCGGCCACCACATCGTCTCTTTAACTTCCACCACTTACGGCCTTCTCAACACCCTCGATCCACCCACTCCTCCACCATCTTCTCGTTTCACTCTCAAACCCCTCCGCTCCGAACCACCTGAAATCATTAACTCTTGGGAACTCATGGAAGGCCTCGACACCGAAAGCTTCCGCTTCTCACCCCTTCTTCCAAAACCATCCAACAAAGAAAACACCGACCCAAACCTAAACCTAAACCTTGCTTTGAAAAAACCCGGTTCGGCTCTTTCGGATCGGTTTGAGAGGATATGTCCACCGAACGGAGAGAAGAAAGTGGTGATCTATACAACAACGTTGAGAGGTGTTCGGAGGACATTTGAGGCTTGCAATGCGGTGAGAGCAGCTTTTGATGCATTTGGTGTACAAATCTGCGAGCGTGACGTTTCGATGGATAGTGGGTTTAAAGAGGAACTGAGGGAGCTTCTGAAAGAGAAGACGGTGGTTCCGCCGAGAGTGTTTGTGAAGGGATACTATATTGGCGGTGCTGAAGAGATGTTGAAGGTTGTGGAAGAGGGTTTGTTGGGAGAGGTTCTTCAGGGTTTGCCAAGAAAAGCTGTTGGTGGAGGTGTTTGTGAGGGTTGCGGTGATATGAGATTCTTGCCTTGTTTTCGATGTAACGGAAGCTGTAAGATGGTGAGTAAACAGAAACAGGGGAACACTGTTGTTGTTAAGTGTAGTGATTATACCAAAATGTCATTACCAATGGCTGATAAATCTATCAAACTCCCAGCTAGAACAGCGAAAGACATTTTGGTGAATGTCGACAAATTCCTCTTCCCAGTTGGTTTTGTTGTAATGGACATAAAGGAAGATGATGGTGCCCCTCTCATATTGAGAAGACCATTTATGAAGACTGCTCGAATGATGATTGACATGGATGATTGCAAAACGAAGATGAGATTAGAGGATGAAGAAATTGGTTTCAGTTTATTTGAAGCATTATGA

Protein sequence

>MsG0480024002.01.T01

MGCVSSHLLNHEDEFGTSALGVGHHIVSLTSTTYGLLNTLDPPTPPPSSRFTLKPLRSEPPEIINSWELMEGLDTESFRFSPLLPKPSNKENTDPNLNLNLALKKPGSALSDRFERICPPNGEKKVVIYTTTLRGVRRTFEACNAVRAAFDAFGVQICERDVSMDSGFKEELRELLKEKTVVPPRVFVKGYYIGGAEEMLKVVEEGLLGEVLQGLPRKAVGGGVCEGCGDMRFLPCFRCNGSCKMVSKQKQGNTVVVKCSDYTKMSLPMADKSIKLPARTAKDILVNVDKFLFPVGFVVMDIKEDDGAPLILRRPFMKTARMMIDMDDCKTKMRLEDEEIGFSLFEAL*