Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022320.01.T01 | XP_013456939.2 | 80.34 | 412 | 52 | 2 | 1 | 386 | 1 | 409 | 0 | 569 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022320.01.T01 | O23305 | 56.19 | 105 | 46 | 0 | 5 | 109 | 1 | 105 | 3.08E-34 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048258.01 | MsG0480022320.01 | 0.802509 | 5.424235e-49 | 2.661866e-46 |
| MsG0080048781.01 | MsG0480022320.01 | 0.813663 | 2.283766e-51 | 1.500539e-48 |
| MsG0080048797.01 | MsG0480022320.01 | 0.826873 | 2.135645e-54 | 2.027955e-51 |
| MsG0180001293.01 | MsG0480022320.01 | 0.843167 | 1.655409e-58 | 2.567695e-55 |
| MsG0180001588.01 | MsG0480022320.01 | 0.802799 | 4.725706e-49 | 2.336356e-46 |
| MsG0180001719.01 | MsG0480022320.01 | 0.844413 | 7.678952e-59 | 1.238670e-55 |
| MsG0180002397.01 | MsG0480022320.01 | 0.814621 | 1.403590e-51 | 9.464523e-49 |
| MsG0180003698.01 | MsG0480022320.01 | 0.813100 | 3.035883e-51 | 1.964284e-48 |
| MsG0180003857.01 | MsG0480022320.01 | 0.839410 | 1.611306e-57 | 2.223420e-54 |
| MsG0180003905.01 | MsG0480022320.01 | 0.834362 | 3.132585e-56 | 3.709114e-53 |
| MsG0180004120.01 | MsG0480022320.01 | 0.873055 | 1.977021e-67 | 8.462354e-64 |
| MsG0180004126.01 | MsG0480022320.01 | 0.808901 | 2.466609e-50 | 1.427490e-47 |
| MsG0180004185.01 | MsG0480022320.01 | 0.819078 | 1.402839e-52 | 1.068767e-49 |
| MsG0180004299.01 | MsG0480022320.01 | 0.815669 | 8.211242e-52 | 5.697401e-49 |
| MsG0180004471.01 | MsG0480022320.01 | 0.807957 | 3.921555e-50 | 2.214047e-47 |
| MsG0180004538.01 | MsG0480022320.01 | 0.829656 | 4.556176e-55 | 4.693137e-52 |
| MsG0180004583.01 | MsG0480022320.01 | 0.845283 | 4.473684e-59 | 7.418447e-56 |
| MsG0180004972.01 | MsG0480022320.01 | 0.810641 | 1.041723e-50 | 6.313601e-48 |
| MsG0180005048.01 | MsG0480022320.01 | 0.816780 | 4.635314e-52 | 3.315473e-49 |
| MsG0180005655.01 | MsG0480022320.01 | 0.826844 | 2.170415e-54 | 2.059216e-51 |
| MsG0180005819.01 | MsG0480022320.01 | 0.804580 | 2.017443e-49 | 1.044021e-46 |
| MsG0180005835.01 | MsG0480022320.01 | 0.815561 | 8.678690e-52 | 6.003818e-49 |
| MsG0180006062.01 | MsG0480022320.01 | 0.845980 | 2.894998e-59 | 4.910072e-56 |
| MsG0180006133.01 | MsG0480022320.01 | 0.851348 | 9.407632e-61 | 1.898814e-57 |
| MsG0380012472.01 | MsG0480022320.01 | 0.805888 | 1.073884e-49 | 5.747569e-47 |
| MsG0380014542.01 | MsG0480022320.01 | 0.820927 | 5.294872e-53 | 4.247049e-50 |
| MsG0380014544.01 | MsG0480022320.01 | 0.807736 | 4.370357e-50 | 2.453185e-47 |
| MsG0380014666.01 | MsG0480022320.01 | 0.847656 | 1.007343e-59 | 1.803096e-56 |
| MsG0480019601.01 | MsG0480022320.01 | 0.800095 | 1.692724e-48 | 7.813359e-46 |
| MsG0480020366.01 | MsG0480022320.01 | 0.845654 | 3.549928e-59 | 5.957788e-56 |
| MsG0480020398.01 | MsG0480022320.01 | 0.854836 | 9.438560e-62 | 2.135952e-58 |
| MsG0480020856.01 | MsG0480022320.01 | 0.831701 | 1.438173e-55 | 1.573011e-52 |
| MsG0480020937.01 | MsG0480022320.01 | 0.820692 | 5.996955e-53 | 4.778358e-50 |
| MsG0480021100.01 | MsG0480022320.01 | 0.805494 | 1.299506e-49 | 6.884892e-47 |
| MsG0480021301.01 | MsG0480022320.01 | 0.835369 | 1.746351e-56 | 2.131266e-53 |
| MsG0480021456.01 | MsG0480022320.01 | 0.828419 | 9.087828e-55 | 9.028325e-52 |
| MsG0480021773.01 | MsG0480022320.01 | 0.822706 | 2.051840e-53 | 1.730579e-50 |
| MsG0480021902.01 | MsG0480022320.01 | 0.833225 | 6.028126e-56 | 6.898008e-53 |
| MsG0480022307.01 | MsG0480022320.01 | 0.825310 | 5.026603e-54 | 4.565037e-51 |
| MsG0480022320.01 | MsG0480022559.01 | 0.814037 | 1.888928e-51 | 1.253764e-48 |
| MsG0480022320.01 | MsG0480022784.01 | 0.830815 | 2.374013e-55 | 2.529167e-52 |
| MsG0480022320.01 | MsG0480023003.01 | 0.816978 | 4.185126e-52 | 3.009883e-49 |
| MsG0480022320.01 | MsG0480023414.01 | 0.840628 | 7.754367e-58 | 1.111055e-54 |
| MsG0480022320.01 | MsG0480023424.01 | 0.827215 | 1.769416e-54 | 1.697151e-51 |
| MsG0480022320.01 | MsG0480023426.01 | 0.843286 | 1.538025e-58 | 2.395064e-55 |
| MsG0480022320.01 | MsG0480023626.01 | 0.835006 | 2.156661e-56 | 2.603350e-53 |
| MsG0480022320.01 | MsG0480023706.01 | 0.854828 | 9.491171e-62 | 2.147336e-58 |
| MsG0480022320.01 | MsG0480024002.01 | 0.837667 | 4.539937e-57 | 5.939938e-54 |
| MsG0480022320.01 | MsG0580024158.01 | 0.801841 | 7.442322e-49 | 3.590734e-46 |
| MsG0480022320.01 | MsG0580024276.01 | 0.844476 | 7.383879e-59 | 1.193494e-55 |
| MsG0480022320.01 | MsG0580024657.01 | 0.801542 | 8.572986e-49 | 4.104847e-46 |
| MsG0480022320.01 | MsG0580024787.01 | 0.834702 | 2.572009e-56 | 3.076046e-53 |
| MsG0480022320.01 | MsG0580024954.01 | 0.852997 | 3.197594e-61 | 6.806586e-58 |
| MsG0480022320.01 | MsG0580025177.01 | 0.804906 | 1.725320e-49 | 9.004772e-47 |
| MsG0480022320.01 | MsG0580025203.01 | 0.825802 | 3.843617e-54 | 3.540046e-51 |
| MsG0480022320.01 | MsG0580025464.01 | 0.830799 | 2.395350e-55 | 2.550703e-52 |
| MsG0480022320.01 | MsG0580025504.01 | 0.829707 | 4.426956e-55 | 4.567070e-52 |
| MsG0480022320.01 | MsG0580028927.01 | 0.867841 | 1.016615e-65 | 3.599991e-62 |
| MsG0480022320.01 | MsG0580028955.01 | 0.847341 | 1.229926e-59 | 2.179065e-56 |
| MsG0480022320.01 | MsG0580029197.01 | 0.819624 | 1.053184e-52 | 8.146397e-50 |
| MsG0480022320.01 | MsG0580029591.01 | 0.837340 | 5.505527e-57 | 7.129662e-54 |
| MsG0480022320.01 | MsG0680034415.01 | 0.809159 | 2.171943e-50 | 1.265776e-47 |
| MsG0480022320.01 | MsG0680035776.01 | 0.837883 | 3.996219e-57 | 5.262827e-54 |
| MsG0480022320.01 | MsG0680035792.01 | 0.829013 | 6.525891e-55 | 6.595761e-52 |
| MsG0480022320.01 | MsG0780038736.01 | 0.830070 | 3.611585e-55 | 3.764585e-52 |
| MsG0480022320.01 | MsG0780039303.01 | 0.812220 | 4.730781e-51 | 2.990444e-48 |
| MsG0480022320.01 | MsG0780039536.01 | 0.819370 | 1.203481e-52 | 9.242986e-50 |
| MsG0480022320.01 | MsG0780039578.01 | 0.833080 | 6.547734e-56 | 7.460925e-53 |
| MsG0480022320.01 | MsG0780039861.01 | 0.806838 | 6.772604e-50 | 3.713989e-47 |
| MsG0480022320.01 | MsG0780040276.01 | 0.808567 | 2.907384e-50 | 1.667946e-47 |
| MsG0480022320.01 | MsG0780040364.01 | 0.842874 | 1.980638e-58 | 3.044041e-55 |
| MsG0480022320.01 | MsG0780040460.01 | 0.812381 | 4.363627e-51 | 2.770247e-48 |
| MsG0480022320.01 | MsG0780040620.01 | 0.806393 | 8.407974e-50 | 4.558260e-47 |
| MsG0480022320.01 | MsG0780040641.01 | 0.825477 | 4.589751e-54 | 4.187881e-51 |
| MsG0480022320.01 | MsG0780040899.01 | 0.849212 | 3.738592e-60 | 7.037201e-57 |
| MsG0480022320.01 | MsG0780041273.01 | 0.829737 | 4.352939e-55 | 4.494844e-52 |
| MsG0480022320.01 | MsG0780041359.01 | 0.813929 | 1.995973e-51 | 1.320864e-48 |
| MsG0480022320.01 | MsG0880041930.01 | 0.826830 | 2.186644e-54 | 2.073793e-51 |
| MsG0480022320.01 | MsG0880042833.01 | 0.815671 | 8.203159e-52 | 5.692130e-49 |
| MsG0480022320.01 | MsG0880042906.01 | 0.804550 | 2.046984e-49 | 1.058459e-46 |
| MsG0480022320.01 | MsG0880044103.01 | 0.808127 | 3.607734e-50 | 2.046026e-47 |
| MsG0480022320.01 | MsG0880045015.01 | 0.818178 | 2.244136e-52 | 1.667846e-49 |
| MsG0480022320.01 | MsG0880045356.01 | 0.808346 | 3.240290e-50 | 1.848332e-47 |
| MsG0480022320.01 | MsG0880045439.01 | 0.841474 | 4.649534e-58 | 6.840105e-55 |
| MsG0480022320.01 | MsG0880045584.01 | 0.839063 | 1.981768e-57 | 2.705440e-54 |
| MsG0480022320.01 | MsG0880045612.01 | 0.839534 | 1.495946e-57 | 2.071861e-54 |
| MsG0480022320.01 | MsG0880045647.01 | 0.831118 | 2.001234e-55 | 2.151037e-52 |
| MsG0480022320.01 | MsG0880045989.01 | 0.842445 | 2.575341e-58 | 3.906072e-55 |
| MsG0480022320.01 | MsG0880046904.01 | 0.830370 | 3.051687e-55 | 3.208929e-52 |
| MsG0480022320.01 | MsG0880046905.01 | 0.851143 | 1.075111e-60 | 2.155369e-57 |
| MsG0480022320.01 | MsG0880046906.01 | 0.826021 | 3.408604e-54 | 3.159026e-51 |
| MsG0480022320.01 | MsG0880046993.01 | 0.814014 | 1.911446e-51 | 1.267907e-48 |
| MsG0480022320.01 | MsG0880047649.01 | 0.841416 | 4.816974e-58 | 7.073361e-55 |
| MsG0380015219.01 | MsG0480022320.01 | 0.819370 | 1.203514e-52 | 9.243194e-50 |
| MsG0380015340.01 | MsG0480022320.01 | 0.837087 | 6.393062e-57 | 8.214893e-54 |
| MsG0380015394.01 | MsG0480022320.01 | 0.810847 | 9.401314e-51 | 5.729467e-48 |
| MsG0380015402.01 | MsG0480022320.01 | 0.822832 | 1.918166e-53 | 1.623687e-50 |
| MsG0380015656.01 | MsG0480022320.01 | 0.829667 | 4.528653e-55 | 4.666256e-52 |
| MsG0380015954.01 | MsG0480022320.01 | 0.820185 | 7.839702e-53 | 6.160051e-50 |
| MsG0380016092.01 | MsG0480022320.01 | 0.807565 | 4.749677e-50 | 2.654154e-47 |
| MsG0380016217.01 | MsG0480022320.01 | 0.817338 | 3.473603e-52 | 2.522727e-49 |
| MsG0380016225.01 | MsG0480022320.01 | 0.825190 | 5.364175e-54 | 4.855287e-51 |
| MsG0380017128.01 | MsG0480022320.01 | 0.822141 | 2.776260e-53 | 2.304097e-50 |
| MsG0380017181.01 | MsG0480022320.01 | 0.841523 | 4.512240e-58 | 6.647910e-55 |
| MsG0380017332.01 | MsG0480022320.01 | 0.849319 | 3.491107e-60 | 6.593190e-57 |
| MsG0380017588.01 | MsG0480022320.01 | 0.826607 | 2.471843e-54 | 2.329226e-51 |
| MsG0380017605.01 | MsG0480022320.01 | 0.828973 | 6.673373e-55 | 6.736689e-52 |
| MsG0480018106.01 | MsG0480022320.01 | 0.803213 | 3.880338e-49 | 1.938710e-46 |
| MsG0480018228.01 | MsG0480022320.01 | 0.838627 | 2.569929e-57 | 3.462329e-54 |
| MsG0280006563.01 | MsG0480022320.01 | 0.812970 | 3.242190e-51 | 2.090483e-48 |
| MsG0280006717.01 | MsG0480022320.01 | 0.847414 | 1.174198e-59 | 2.085434e-56 |
| MsG0280007003.01 | MsG0480022320.01 | 0.832074 | 1.163285e-55 | 1.286322e-52 |
| MsG0280007688.01 | MsG0480022320.01 | 0.808699 | 2.724357e-50 | 1.568296e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022320.01.T01 | MTR_8g069140 | 77.176 | 425 | 58 | 2 | 1 | 386 | 1 | 425 | 0.0 | 568 |
| MsG0480022320.01.T01 | MTR_4g088235 | 79.612 | 412 | 55 | 2 | 1 | 386 | 1 | 409 | 0.0 | 563 |
| MsG0480022320.01.T01 | MTR_3g092440 | 60.104 | 386 | 66 | 7 | 48 | 409 | 20 | 341 | 3.23e-120 | 356 |
| MsG0480022320.01.T01 | MTR_4g088240 | 63.768 | 138 | 47 | 3 | 1 | 137 | 1 | 136 | 4.36e-50 | 171 |
| MsG0480022320.01.T01 | MTR_4g088240 | 47.305 | 167 | 55 | 9 | 260 | 413 | 128 | 274 | 2.12e-19 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022320.01.T01 | AT4G14490 | 56.190 | 105 | 46 | 0 | 5 | 109 | 1 | 105 | 3.14e-35 | 134 |
| MsG0480022320.01.T01 | AT3G02400 | 59.223 | 103 | 42 | 0 | 6 | 108 | 2 | 104 | 8.76e-34 | 133 |
| MsG0480022320.01.T01 | AT3G02400 | 59.223 | 103 | 42 | 0 | 6 | 108 | 2 | 104 | 1.29e-33 | 132 |
Find 118 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACTAAAAGTGTTAAATTT+AGG | 0.113256 | 4:-71085518 | MsG0480022320.01.T01:CDS |
| TCCATTTCAATTCCGGTAAT+TGG | 0.135877 | 4:-71085743 | MsG0480022320.01.T01:CDS |
| TACTAAAAGTGTTAAATTTA+GGG | 0.234323 | 4:-71085517 | MsG0480022320.01.T01:CDS |
| TGATTCTGCTGATGTGAATT+TGG | 0.240026 | 4:-71085376 | MsG0480022320.01.T01:CDS |
| CATAGGTTTATCTTCTACTA+TGG | 0.263666 | 4:+71085560 | None:intergenic |
| TGATTCGAGTAATGGTAATT+TGG | 0.299985 | 4:-71085283 | MsG0480022320.01.T01:CDS |
| CTCGTAACCTTCATCGGTTC+AGG | 0.305130 | 4:+71085426 | None:intergenic |
| TGAATTGAGTGTTGGAGATT+TGG | 0.321055 | 4:-71085061 | MsG0480022320.01.T01:CDS |
| GAGGAATAAGATAAATAAAA+TGG | 0.323112 | 4:-71085091 | MsG0480022320.01.T01:CDS |
| GGTTTCCGTAGGGTTACTTT+GGG | 0.323544 | 4:+71085581 | None:intergenic |
| CTCACTATCCATTTCAATTC+CGG | 0.326349 | 4:-71085750 | MsG0480022320.01.T01:CDS |
| TGCTAAAGGAAAGGAGAAAT+TGG | 0.331726 | 4:-71084830 | MsG0480022320.01.T01:CDS |
| TGATTCGAGCAATGGAGATT+TGG | 0.343124 | 4:-71085172 | MsG0480022320.01.T01:CDS |
| TCCAATTACCGGAATTGAAA+TGG | 0.367892 | 4:+71085742 | None:intergenic |
| AAGTGTTAAATTTAGGGTTC+CGG | 0.374553 | 4:-71085511 | MsG0480022320.01.T01:CDS |
| AGTAACTTCACCGATCTTAA+TGG | 0.379519 | 4:+71085629 | None:intergenic |
| TGGTGGATTCGGGTTTGAAT+AGG | 0.396059 | 4:+71085841 | None:intergenic |
| CCATCACCAACACGCTCTTC+TGG | 0.402421 | 4:+71084760 | None:intergenic |
| TGGATTCGGGTTTGAATAGG+TGG | 0.412924 | 4:+71085844 | None:intergenic |
| ATCTGTGAGAATCCAATTAC+CGG | 0.423058 | 4:+71085731 | None:intergenic |
| GAAAACAAGGGGCGGTGCTA+AGG | 0.423206 | 4:-71084914 | MsG0480022320.01.T01:CDS |
| TGGTTTCCGTAGGGTTACTT+TGG | 0.426738 | 4:+71085580 | None:intergenic |
| TCGTCACCAACGCACTCTTC+CGG | 0.427183 | 4:+71084713 | None:intergenic |
| CTGAGATGAAAAGGAGTATT+CGG | 0.427337 | 4:+71085663 | None:intergenic |
| AAAGGAGTATTCGGAGGAAC+AGG | 0.428281 | 4:+71085672 | None:intergenic |
| AGTAGAAGATAAACCTATGA+AGG | 0.445778 | 4:-71085556 | MsG0480022320.01.T01:CDS |
| CCCGAATCCACCATCAAAAT+CGG | 0.448567 | 4:-71085831 | MsG0480022320.01.T01:CDS |
| TGAGGGTGACAAGGAATTTG+AGG | 0.455722 | 4:-71085110 | MsG0480022320.01.T01:CDS |
| ATAAAGAGAAGGAGAAATAC+CGG | 0.466813 | 4:-71084732 | MsG0480022320.01.T01:CDS |
| GACGTACTCGCGGAGTCTCT+CGG | 0.467250 | 4:+71084425 | None:intergenic |
| AAAACAAGGGGCGGTGCTAA+GGG | 0.473550 | 4:-71084913 | MsG0480022320.01.T01:CDS |
| GGAGGGTGTGAAAGAGAAAG+TGG | 0.475266 | 4:-71085151 | MsG0480022320.01.T01:CDS |
| CCAGAAGAGCGTGTTGGTGA+TGG | 0.475527 | 4:-71084760 | MsG0480022320.01.T01:CDS |
| ATTGATGAAGTTAACAAGGA+TGG | 0.484506 | 4:+71085605 | None:intergenic |
| TTACGAGGAATACGCGGAGC+AGG | 0.485036 | 4:-71085410 | MsG0480022320.01.T01:CDS |
| GAACCATCGCTGAGATGAAA+AGG | 0.497457 | 4:+71085654 | None:intergenic |
| TCTTCTACTATGGTTTCCGT+AGG | 0.497993 | 4:+71085570 | None:intergenic |
| GGAAGATTTGAGCTGGTGAA+TGG | 0.498542 | 4:-71084958 | MsG0480022320.01.T01:CDS |
| TCTTCGTCAATACTCTGAAC+CGG | 0.504406 | 4:+71085492 | None:intergenic |
| GGATTCGGGTTTGAATAGGT+GGG | 0.504613 | 4:+71085845 | None:intergenic |
| GGTTTCGCCTTTACGTGGAC+CGG | 0.505011 | 4:+71085866 | None:intergenic |
| AGGAATTGAAGTGTGAGAGA+TGG | 0.506082 | 4:+71085891 | None:intergenic |
| GAGATATGTGATTCGAGTAA+TGG | 0.509014 | 4:-71085291 | MsG0480022320.01.T01:CDS |
| AAAACAGATACATGATGAAA+CGG | 0.510214 | 4:-71084478 | MsG0480022320.01.T01:intron |
| GAGGTTTGTGATTCGAGCAA+TGG | 0.513584 | 4:-71085180 | MsG0480022320.01.T01:CDS |
| TAAGGGGAAGAAGAAATTGC+AGG | 0.513857 | 4:-71084896 | MsG0480022320.01.T01:CDS |
| ATGTATCAGAATCAGAAAGC+TGG | 0.516426 | 4:-71084399 | MsG0480022320.01.T01:CDS |
| TTCGAGCAATGGAGATTTGG+AGG | 0.519234 | 4:-71085169 | MsG0480022320.01.T01:CDS |
| GAATAAGAAGAATACGGTTG+AGG | 0.521957 | 4:-71085199 | MsG0480022320.01.T01:CDS |
| TTCCTCGCCGGTCCACGTAA+AGG | 0.523068 | 4:-71085873 | MsG0480022320.01.T01:CDS |
| TTCGAAGAATAAGAAGAATA+CGG | 0.526530 | 4:-71085205 | MsG0480022320.01.T01:CDS |
| GAGGAAGAGTGTGTTGGTGA+TGG | 0.527304 | 4:-71084808 | MsG0480022320.01.T01:CDS |
| AGGTGTTTGGTGGAAATACC+TGG | 0.527977 | 4:+71085771 | None:intergenic |
| GTATTCCTCGTAACCTTCAT+CGG | 0.528796 | 4:+71085420 | None:intergenic |
| CAGGAAGAGATTGTTGGTGA+TGG | 0.532227 | 4:-71084877 | MsG0480022320.01.T01:CDS |
| GAAATACCTGGATCTTTGAT+CGG | 0.538410 | 4:+71085783 | None:intergenic |
| AAATACCTGGATCTTTGATC+GGG | 0.539665 | 4:+71085784 | None:intergenic |
| GAGAATTGTGATGATGCTAA+AGG | 0.541257 | 4:-71084844 | MsG0480022320.01.T01:CDS |
| ATCCACCATCAAAATCGGTC+GGG | 0.543736 | 4:-71085826 | MsG0480022320.01.T01:CDS |
| GAGGTTTCTGAATTGAGTGT+TGG | 0.543871 | 4:-71085069 | MsG0480022320.01.T01:CDS |
| AAATTGCAGGAAGAGATTGT+TGG | 0.543947 | 4:-71084883 | MsG0480022320.01.T01:CDS |
| CTTCTACTATGGTTTCCGTA+GGG | 0.549514 | 4:+71085571 | None:intergenic |
| ATGGATAGTGAGGTGTTTGG+TGG | 0.549947 | 4:+71085761 | None:intergenic |
| TGATGGAGATGATAAAGAAA+AGG | 0.550272 | 4:-71084791 | MsG0480022320.01.T01:CDS |
| TGATGGAGAAGATAAAGAGA+AGG | 0.555886 | 4:-71084743 | MsG0480022320.01.T01:CDS |
| GGATCGACCTGAACCGATGA+AGG | 0.556237 | 4:-71085433 | MsG0480022320.01.T01:CDS |
| AACCTCCCGATCAAAGATCC+AGG | 0.559022 | 4:-71085789 | MsG0480022320.01.T01:CDS |
| AACAGGTTTAGTGTCTAAAA+CGG | 0.560608 | 4:+71085689 | None:intergenic |
| GAGATTGTTGGTGATGGAGA+TGG | 0.565638 | 4:-71084871 | MsG0480022320.01.T01:CDS |
| GGATGATGTGAAGGAGAAAG+TGG | 0.566386 | 4:-71085262 | MsG0480022320.01.T01:CDS |
| TTGTGATGATGCTAAAGGAA+AGG | 0.566732 | 4:-71084839 | MsG0480022320.01.T01:CDS |
| TTGAATGGTGATGATGAAGA+TGG | 0.567085 | 4:-71085462 | MsG0480022320.01.T01:CDS |
| AGGTGGGTTTCGCCTTTACG+TGG | 0.568734 | 4:+71085861 | None:intergenic |
| GAAATGGATAGTGAGGTGTT+TGG | 0.570327 | 4:+71085758 | None:intergenic |
| GACGAAGATCAAATGTTGAA+TGG | 0.571226 | 4:-71085477 | MsG0480022320.01.T01:CDS |
| TGATTGAGGAAGATTTGAGC+TGG | 0.575981 | 4:-71084965 | MsG0480022320.01.T01:intron |
| CTCACACTTCAATTCCTCGC+CGG | 0.576251 | 4:-71085885 | MsG0480022320.01.T01:CDS |
| AGAAGAATGTGAGGGTGACA+AGG | 0.576462 | 4:-71085119 | MsG0480022320.01.T01:CDS |
| AGAAGAATGTGAGGGTGACA+AGG | 0.576462 | 4:-71085230 | MsG0480022320.01.T01:CDS |
| TACCTGGATCTTTGATCGGG+AGG | 0.581164 | 4:+71085787 | None:intergenic |
| TAAAGGAAAGGAGAAATTGG+AGG | 0.581664 | 4:-71084827 | MsG0480022320.01.T01:CDS |
| CGAAGAATGTGAGGGTGACG+AGG | 0.587389 | 4:-71085341 | MsG0480022320.01.T01:CDS |
| TTGAGTGTTGGAGATTTGGA+TGG | 0.587988 | 4:-71085057 | MsG0480022320.01.T01:intron |
| AATTGAAGTGTGAGAGATGG+AGG | 0.588847 | 4:+71085894 | None:intergenic |
| GGGTGTGAAAGAGAAAGTGG+AGG | 0.589644 | 4:-71085148 | MsG0480022320.01.T01:CDS |
| CGCCTTTACGTGGACCGGCG+AGG | 0.592205 | 4:+71085871 | None:intergenic |
| CGGAATTGAAATGGATAGTG+AGG | 0.592334 | 4:+71085751 | None:intergenic |
| GGGGATTGATGAAGTTAACA+AGG | 0.594113 | 4:+71085601 | None:intergenic |
| TGGTAATTTGGATGATGTGA+AGG | 0.602436 | 4:-71085271 | MsG0480022320.01.T01:CDS |
| TGATGATGAAGATGGAATTG+TGG | 0.602937 | 4:-71085454 | MsG0480022320.01.T01:CDS |
| AAACAAGGGGCGGTGCTAAG+GGG | 0.604380 | 4:-71084912 | MsG0480022320.01.T01:CDS |
| AATTTACCAGAAGAGCGTGT+TGG | 0.606294 | 4:-71084766 | MsG0480022320.01.T01:CDS |
| ACAGATCTCGATTCTTCTAA+CGG | 0.609144 | 4:-71085714 | MsG0480022320.01.T01:CDS |
| GAAATACCGGAAGAGTGCGT+TGG | 0.609976 | 4:-71084719 | MsG0480022320.01.T01:intron |
| GTAGAAGATAAACCTATGAA+GGG | 0.610432 | 4:-71085555 | MsG0480022320.01.T01:CDS |
| AATCCACCATCAAAATCGGT+CGG | 0.610443 | 4:-71085827 | MsG0480022320.01.T01:CDS |
| TGATCGGGAGGTTGTTGCCG+CGG | 0.616784 | 4:+71085799 | None:intergenic |
| ATTTGAGCTGGTGAATGGAG+TGG | 0.617093 | 4:-71084953 | MsG0480022320.01.T01:CDS |
| GATGGTTCCACCATTAAGAT+CGG | 0.618053 | 4:-71085639 | MsG0480022320.01.T01:CDS |
| TCGAGCAATGGAGATTTGGA+GGG | 0.619860 | 4:-71085168 | MsG0480022320.01.T01:CDS |
| GTTTCCGTAGGGTTACTTTG+GGG | 0.622007 | 4:+71085582 | None:intergenic |
| GAATAAGATAAATAAAATGG+AGG | 0.624608 | 4:-71085088 | MsG0480022320.01.T01:CDS |
| CAATCCCCAAAGTAACCCTA+CGG | 0.625349 | 4:-71085586 | MsG0480022320.01.T01:CDS |
| AGGAAGTGAAGAAGAATGTG+AGG | 0.626445 | 4:-71085128 | MsG0480022320.01.T01:CDS |
| AGGAAGTGAAGAAGAATGTG+AGG | 0.626445 | 4:-71085239 | MsG0480022320.01.T01:CDS |
| CTGAACCGATGAAGGTTACG+AGG | 0.630587 | 4:-71085425 | MsG0480022320.01.T01:CDS |
| AACTTCACCGATCTTAATGG+TGG | 0.642883 | 4:+71085632 | None:intergenic |
| CTGTAGTATCGAAGAATGTG+AGG | 0.646172 | 4:-71085350 | MsG0480022320.01.T01:CDS |
| CTACATATACTAGCATTCAG+TGG | 0.652902 | 4:+71084371 | None:intergenic |
| TGAAGGTTACGAGGAATACG+CGG | 0.654682 | 4:-71085416 | MsG0480022320.01.T01:CDS |
| AAAATCGGTCGGGTCATCCG+CGG | 0.657840 | 4:-71085816 | MsG0480022320.01.T01:CDS |
| TGATGTGAAGGAGAAAGTGG+AGG | 0.668251 | 4:-71085259 | MsG0480022320.01.T01:CDS |
| AGATGAAAAGGAGTATTCGG+AGG | 0.680462 | 4:+71085666 | None:intergenic |
| GGAAGTGAAGAAGAATGTGA+GGG | 0.687843 | 4:-71085127 | MsG0480022320.01.T01:CDS |
| GGAAGTGAAGAAGAATGTGA+GGG | 0.687843 | 4:-71085238 | MsG0480022320.01.T01:CDS |
| AAATTGGAGGAAGAGTGTGT+TGG | 0.722760 | 4:-71084814 | MsG0480022320.01.T01:CDS |
| GATACATTATGACGTACTCG+CGG | 0.753024 | 4:+71084415 | None:intergenic |
| TGTAGTATCGAAGAATGTGA+GGG | 0.756754 | 4:-71085349 | MsG0480022320.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTAAAAGTGTTAAATTTA+GGG | - | Chr4:71084775-71084794 | MsG0480022320.01.T01:CDS | 15.0% |
| !! | AAGAAAAAGAGAATTTGAAT+GGG | - | Chr4:71085721-71085740 | MsG0480022320.01.T01:CDS | 20.0% |
| !! | GAATAAGATAAATAAAATGG+AGG | - | Chr4:71085204-71085223 | MsG0480022320.01.T01:CDS | 20.0% |
| !! | GAGGAATAAGATAAATAAAA+TGG | - | Chr4:71085201-71085220 | MsG0480022320.01.T01:CDS | 20.0% |
| !! | TAAAAGAAAAGAGAAATTAC+AGG | - | Chr4:71085607-71085626 | MsG0480022320.01.T01:CDS | 20.0% |
| !!! | GTACTAAAAGTGTTAAATTT+AGG | - | Chr4:71084774-71084793 | MsG0480022320.01.T01:CDS | 20.0% |
| ! | AAAACAGATACATGATGAAA+CGG | - | Chr4:71085814-71085833 | MsG0480022320.01.T01:CDS | 25.0% |
| ! | ATGTTGAGAAAAAGAAAACA+AGG | - | Chr4:71085365-71085384 | MsG0480022320.01.T01:CDS | 25.0% |
| ! | GAAGAAAAAGAGAATTTGAA+TGG | - | Chr4:71085720-71085739 | MsG0480022320.01.T01:CDS | 25.0% |
| ! | TGTTGAGAAAAAGAAAACAA+GGG | - | Chr4:71085366-71085385 | MsG0480022320.01.T01:CDS | 25.0% |
| ! | TTCGAAGAATAAGAAGAATA+CGG | - | Chr4:71085087-71085106 | MsG0480022320.01.T01:CDS | 25.0% |
| ! | TTGATGAAGAAATAAAGAGA+AGG | - | Chr4:71085642-71085661 | MsG0480022320.01.T01:CDS | 25.0% |
| AAACCTATGAAGGGTAAAAA+AGG | - | Chr4:71084746-71084765 | MsG0480022320.01.T01:CDS | 30.0% | |
| AAATTCATCTTCTCCAAATC+AGG | + | Chr4:71085758-71085777 | None:intergenic | 30.0% | |
| AACAGGTTTAGTGTCTAAAA+CGG | + | Chr4:71084606-71084625 | None:intergenic | 30.0% | |
| AACCTATGAAGGGTAAAAAA+GGG | - | Chr4:71084747-71084766 | MsG0480022320.01.T01:CDS | 30.0% | |
| AAGGAATGCGAAAGAATAAA+GGG | - | Chr4:71085300-71085319 | MsG0480022320.01.T01:CDS | 30.0% | |
| AATTTGAATGGGATGAGAAT+TGG | - | Chr4:71085732-71085751 | MsG0480022320.01.T01:CDS | 30.0% | |
| AGTAGAAGATAAACCTATGA+AGG | - | Chr4:71084736-71084755 | MsG0480022320.01.T01:CDS | 30.0% | |
| ATAAAGAGAAGGAGAAATAC+CGG | - | Chr4:71085560-71085579 | MsG0480022320.01.T01:CDS | 30.0% | |
| ATTGATGAAGTTAACAAGGA+TGG | + | Chr4:71084690-71084709 | None:intergenic | 30.0% | |
| CATAGGTTTATCTTCTACTA+TGG | + | Chr4:71084735-71084754 | None:intergenic | 30.0% | |
| GATTTGGAGAAGATGAATTT+AGG | - | Chr4:71085758-71085777 | MsG0480022320.01.T01:CDS | 30.0% | |
| GTAGAAGATAAACCTATGAA+GGG | - | Chr4:71084737-71084756 | MsG0480022320.01.T01:CDS | 30.0% | |
| GTTGAGAAAAAGAAAACAAG+GGG | - | Chr4:71085367-71085386 | MsG0480022320.01.T01:CDS | 30.0% | |
| TGATGGAGATGATAAAGAAA+AGG | - | Chr4:71085501-71085520 | MsG0480022320.01.T01:CDS | 30.0% | |
| TGATTCGAGTAATGGTAATT+TGG | - | Chr4:71085009-71085028 | MsG0480022320.01.T01:intron | 30.0% | |
| ! | AAATCACAAGAAAAGTGTGT+TGG | - | Chr4:71085667-71085686 | MsG0480022320.01.T01:CDS | 30.0% |
| ! | AAGTGTTAAATTTAGGGTTC+CGG | - | Chr4:71084781-71084800 | MsG0480022320.01.T01:CDS | 30.0% |
| ! | GTTTCATCATGTATCTGTTT+TGG | + | Chr4:71085815-71085834 | None:intergenic | 30.0% |
| AAATACCTGGATCTTTGATC+GGG | + | Chr4:71084511-71084530 | None:intergenic | 35.0% | |
| AAATTGCAGGAAGAGATTGT+TGG | - | Chr4:71085409-71085428 | MsG0480022320.01.T01:CDS | 35.0% | |
| ACAGATCTCGATTCTTCTAA+CGG | - | Chr4:71084578-71084597 | MsG0480022320.01.T01:intron | 35.0% | |
| AGAAGATGAATTTAGGTGAG+TGG | - | Chr4:71085765-71085784 | MsG0480022320.01.T01:CDS | 35.0% | |
| AGGAATGCGAAAGAATAAAG+GGG | - | Chr4:71085301-71085320 | MsG0480022320.01.T01:CDS | 35.0% | |
| AGTAACTTCACCGATCTTAA+TGG | + | Chr4:71084666-71084685 | None:intergenic | 35.0% | |
| ATCTGTGAGAATCCAATTAC+CGG | + | Chr4:71084564-71084583 | None:intergenic | 35.0% | |
| ATGTATCAGAATCAGAAAGC+TGG | - | Chr4:71085893-71085912 | MsG0480022320.01.T01:CDS | 35.0% | |
| CAAGGAATGCGAAAGAATAA+AGG | - | Chr4:71085299-71085318 | MsG0480022320.01.T01:CDS | 35.0% | |
| CTCACTATCCATTTCAATTC+CGG | - | Chr4:71084542-71084561 | MsG0480022320.01.T01:intron | 35.0% | |
| GAAATACCTGGATCTTTGAT+CGG | + | Chr4:71084512-71084531 | None:intergenic | 35.0% | |
| GAATAAGAAGAATACGGTTG+AGG | - | Chr4:71085093-71085112 | MsG0480022320.01.T01:CDS | 35.0% | |
| GACGAAGATCAAATGTTGAA+TGG | - | Chr4:71084815-71084834 | MsG0480022320.01.T01:CDS | 35.0% | |
| GAGATATGTGATTCGAGTAA+TGG | - | Chr4:71085001-71085020 | MsG0480022320.01.T01:intron | 35.0% | |
| TAAAGGAAAGGAGAAATTGG+AGG | - | Chr4:71085465-71085484 | MsG0480022320.01.T01:CDS | 35.0% | |
| TCCAATTACCGGAATTGAAA+TGG | + | Chr4:71084553-71084572 | None:intergenic | 35.0% | |
| TCCATTTCAATTCCGGTAAT+TGG | - | Chr4:71084549-71084568 | MsG0480022320.01.T01:intron | 35.0% | |
| TGATGGAGAAGATAAAGAGA+AGG | - | Chr4:71085549-71085568 | MsG0480022320.01.T01:CDS | 35.0% | |
| TGATTCTGCTGATGTGAATT+TGG | - | Chr4:71084916-71084935 | MsG0480022320.01.T01:CDS | 35.0% | |
| TGCTAAAGGAAAGGAGAAAT+TGG | - | Chr4:71085462-71085481 | MsG0480022320.01.T01:CDS | 35.0% | |
| TGGTAATTTGGATGATGTGA+AGG | - | Chr4:71085021-71085040 | MsG0480022320.01.T01:intron | 35.0% | |
| ! | GAGAATTGTGATGATGCTAA+AGG | - | Chr4:71085448-71085467 | MsG0480022320.01.T01:CDS | 35.0% |
| ! | TGATGATGAAGATGGAATTG+TGG | - | Chr4:71084838-71084857 | MsG0480022320.01.T01:CDS | 35.0% |
| ! | TGTAGTATCGAAGAATGTGA+GGG | - | Chr4:71084943-71084962 | MsG0480022320.01.T01:CDS | 35.0% |
| ! | TTGAATGGTGATGATGAAGA+TGG | - | Chr4:71084830-71084849 | MsG0480022320.01.T01:CDS | 35.0% |
| ! | TTGTGATGATGCTAAAGGAA+AGG | - | Chr4:71085453-71085472 | MsG0480022320.01.T01:CDS | 35.0% |
| !! | CTGAGATGAAAAGGAGTATT+CGG | + | Chr4:71084632-71084651 | None:intergenic | 35.0% |
| !! | TGAATTGAGTGTTGGAGATT+TGG | - | Chr4:71085231-71085250 | MsG0480022320.01.T01:CDS | 35.0% |
| !!! | TTCCCTTTTTTACCCTTCAT+AGG | + | Chr4:71084752-71084771 | None:intergenic | 35.0% |
| AACTTCACCGATCTTAATGG+TGG | + | Chr4:71084663-71084682 | None:intergenic | 40.0% | |
| AATCCACCATCAAAATCGGT+CGG | - | Chr4:71084465-71084484 | MsG0480022320.01.T01:CDS | 40.0% | |
| AATTGAAGTGTGAGAGATGG+AGG | + | Chr4:71084401-71084420 | None:intergenic | 40.0% | |
| AGGAAGTGAAGAAGAATGTG+AGG | - | Chr4:71085053-71085072 | MsG0480022320.01.T01:intron | 40.0% | |
| AGGAATTGAAGTGTGAGAGA+TGG | + | Chr4:71084404-71084423 | None:intergenic | 40.0% | |
| CGGAATTGAAATGGATAGTG+AGG | + | Chr4:71084544-71084563 | None:intergenic | 40.0% | |
| CTTCTACTATGGTTTCCGTA+GGG | + | Chr4:71084724-71084743 | None:intergenic | 40.0% | |
| GAATAAAGGGGTTGTGATTG+AGG | - | Chr4:71085313-71085332 | MsG0480022320.01.T01:CDS | 40.0% | |
| GAGAAAAAGAAAACAAGGGG+CGG | - | Chr4:71085370-71085389 | MsG0480022320.01.T01:CDS | 40.0% | |
| GAGGTTTCTGAATTGAGTGT+TGG | - | Chr4:71085223-71085242 | MsG0480022320.01.T01:CDS | 40.0% | |
| GATACATTATGACGTACTCG+CGG | + | Chr4:71085880-71085899 | None:intergenic | 40.0% | |
| GATGGTTCCACCATTAAGAT+CGG | - | Chr4:71084653-71084672 | MsG0480022320.01.T01:intron | 40.0% | |
| GGAAGTGAAGAAGAATGTGA+GGG | - | Chr4:71085054-71085073 | MsG0480022320.01.T01:intron | 40.0% | |
| GGGGATTGATGAAGTTAACA+AGG | + | Chr4:71084694-71084713 | None:intergenic | 40.0% | |
| GTATTCCTCGTAACCTTCAT+CGG | + | Chr4:71084875-71084894 | None:intergenic | 40.0% | |
| TAAGGGGAAGAAGAAATTGC+AGG | - | Chr4:71085396-71085415 | MsG0480022320.01.T01:CDS | 40.0% | |
| TCTTCGTCAATACTCTGAAC+CGG | + | Chr4:71084803-71084822 | None:intergenic | 40.0% | |
| TCTTCTACTATGGTTTCCGT+AGG | + | Chr4:71084725-71084744 | None:intergenic | 40.0% | |
| TGATTCGAGCAATGGAGATT+TGG | - | Chr4:71085120-71085139 | MsG0480022320.01.T01:CDS | 40.0% | |
| TGATTGAGGAAGATTTGAGC+TGG | - | Chr4:71085327-71085346 | MsG0480022320.01.T01:CDS | 40.0% | |
| ! | AAATTGGAGGAAGAGTGTGT+TGG | - | Chr4:71085478-71085497 | MsG0480022320.01.T01:CDS | 40.0% |
| ! | AATTTACCAGAAGAGCGTGT+TGG | - | Chr4:71085526-71085545 | MsG0480022320.01.T01:CDS | 40.0% |
| ! | AGGTGAGTGGTTTGATTTCT+TGG | - | Chr4:71085778-71085797 | MsG0480022320.01.T01:CDS | 40.0% |
| ! | CAAGAAAAGTGTGTTGGTGA+TGG | - | Chr4:71085673-71085692 | MsG0480022320.01.T01:CDS | 40.0% |
| ! | CTGTAGTATCGAAGAATGTG+AGG | - | Chr4:71084942-71084961 | MsG0480022320.01.T01:CDS | 40.0% |
| ! | GAAATGGATAGTGAGGTGTT+TGG | + | Chr4:71084537-71084556 | None:intergenic | 40.0% |
| !! | AGATGAAAAGGAGTATTCGG+AGG | + | Chr4:71084629-71084648 | None:intergenic | 40.0% |
| !! | TTGAGTGTTGGAGATTTGGA+TGG | - | Chr4:71085235-71085254 | MsG0480022320.01.T01:CDS | 40.0% |
| !!! | ACCGATTTTGATGGTGGATT+CGG | + | Chr4:71084465-71084484 | None:intergenic | 40.0% |
| AGAAGAATGTGAGGGTGACA+AGG | - | Chr4:71085062-71085081 | MsG0480022320.01.T01:CDS | 45.0% | |
| ATCCACCATCAAAATCGGTC+GGG | - | Chr4:71084466-71084485 | MsG0480022320.01.T01:CDS | 45.0% | |
| ATTTGAGCTGGTGAATGGAG+TGG | - | Chr4:71085339-71085358 | MsG0480022320.01.T01:CDS | 45.0% | |
| CAATCCCCAAAGTAACCCTA+CGG | - | Chr4:71084706-71084725 | MsG0480022320.01.T01:intron | 45.0% | |
| CCCGAATCCACCATCAAAAT+CGG | - | Chr4:71084461-71084480 | MsG0480022320.01.T01:CDS | 45.0% | |
| GAACCATCGCTGAGATGAAA+AGG | + | Chr4:71084641-71084660 | None:intergenic | 45.0% | |
| GAGGTTTGTGATTCGAGCAA+TGG | - | Chr4:71085112-71085131 | MsG0480022320.01.T01:CDS | 45.0% | |
| GGAAGATTTGAGCTGGTGAA+TGG | - | Chr4:71085334-71085353 | MsG0480022320.01.T01:CDS | 45.0% | |
| GGATGATGTGAAGGAGAAAG+TGG | - | Chr4:71085030-71085049 | MsG0480022320.01.T01:intron | 45.0% | |
| TCGAGCAATGGAGATTTGGA+GGG | - | Chr4:71085124-71085143 | MsG0480022320.01.T01:CDS | 45.0% | |
| TGAAGGTTACGAGGAATACG+CGG | - | Chr4:71084876-71084895 | MsG0480022320.01.T01:CDS | 45.0% | |
| TGAGGGTGACAAGGAATTTG+AGG | - | Chr4:71085182-71085201 | MsG0480022320.01.T01:CDS | 45.0% | |
| TGATGTGAAGGAGAAAGTGG+AGG | - | Chr4:71085033-71085052 | MsG0480022320.01.T01:intron | 45.0% | |
| TGGAGATTTGGATGGTGTGA+AGG | - | Chr4:71085243-71085262 | MsG0480022320.01.T01:CDS | 45.0% | |
| TGGTTTCCGTAGGGTTACTT+TGG | + | Chr4:71084715-71084734 | None:intergenic | 45.0% | |
| TTCGAGCAATGGAGATTTGG+AGG | - | Chr4:71085123-71085142 | MsG0480022320.01.T01:CDS | 45.0% | |
| TTTGGATGGTGTGAAGGAGA+AGG | - | Chr4:71085249-71085268 | MsG0480022320.01.T01:CDS | 45.0% | |
| ! | ACTCCTTTTCATCTCAGCGA+TGG | - | Chr4:71084635-71084654 | MsG0480022320.01.T01:intron | 45.0% |
| ! | AGGTGTTTGGTGGAAATACC+TGG | + | Chr4:71084524-71084543 | None:intergenic | 45.0% |
| ! | ATGGATAGTGAGGTGTTTGG+TGG | + | Chr4:71084534-71084553 | None:intergenic | 45.0% |
| ! | CAGGAAGAGATTGTTGGTGA+TGG | - | Chr4:71085415-71085434 | MsG0480022320.01.T01:CDS | 45.0% |
| ! | GGATGAGAATTGGCCTGATT+TGG | - | Chr4:71085742-71085761 | MsG0480022320.01.T01:CDS | 45.0% |
| ! | GGATTCGGGTTTGAATAGGT+GGG | + | Chr4:71084450-71084469 | None:intergenic | 45.0% |
| ! | GGTTTCCGTAGGGTTACTTT+GGG | + | Chr4:71084714-71084733 | None:intergenic | 45.0% |
| ! | GTTTCCGTAGGGTTACTTTG+GGG | + | Chr4:71084713-71084732 | None:intergenic | 45.0% |
| ! | TCTCTCGGCTTTTTGTCTCA+TGG | + | Chr4:71085855-71085874 | None:intergenic | 45.0% |
| ! | TGGATTCGGGTTTGAATAGG+TGG | + | Chr4:71084451-71084470 | None:intergenic | 45.0% |
| !! | AAAGGAGTATTCGGAGGAAC+AGG | + | Chr4:71084623-71084642 | None:intergenic | 45.0% |
| !! | AAGTGTGTTGGTGATGGAGA+TGG | - | Chr4:71085679-71085698 | MsG0480022320.01.T01:CDS | 45.0% |
| !! | GAGATTGTTGGTGATGGAGA+TGG | - | Chr4:71085421-71085440 | MsG0480022320.01.T01:CDS | 45.0% |
| !! | TGGTGGATTCGGGTTTGAAT+AGG | + | Chr4:71084454-71084473 | None:intergenic | 45.0% |
| !!! | CCGATTTTGATGGTGGATTC+GGG | + | Chr4:71084464-71084483 | None:intergenic | 45.0% |
| AACCTCCCGATCAAAGATCC+AGG | - | Chr4:71084503-71084522 | MsG0480022320.01.T01:intron | 50.0% | |
| CTCACACTTCAATTCCTCGC+CGG | - | Chr4:71084407-71084426 | MsG0480022320.01.T01:CDS | 50.0% | |
| CTGAACCGATGAAGGTTACG+AGG | - | Chr4:71084867-71084886 | MsG0480022320.01.T01:CDS | 50.0% | |
| CTTGTCATCCTCACACTCCT+CGG | + | Chr4:71085283-71085302 | None:intergenic | 50.0% | |
| GGGTGTGAAAGAGAAAGTGG+AGG | - | Chr4:71085144-71085163 | MsG0480022320.01.T01:CDS | 50.0% | |
| TACCTGGATCTTTGATCGGG+AGG | + | Chr4:71084508-71084527 | None:intergenic | 50.0% | |
| ! | AAAACAAGGGGCGGTGCTAA+GGG | - | Chr4:71085379-71085398 | MsG0480022320.01.T01:CDS | 50.0% |
| ! | GAAATACCGGAAGAGTGCGT+TGG | - | Chr4:71085573-71085592 | MsG0480022320.01.T01:CDS | 50.0% |
| ! | GAGGAAGAGTGTGTTGGTGA+TGG | - | Chr4:71085484-71085503 | MsG0480022320.01.T01:CDS | 50.0% |
| ! | GGAGGGTGTGAAAGAGAAAG+TGG | - | Chr4:71085141-71085160 | MsG0480022320.01.T01:CDS | 50.0% |
| !! | CTCGTAACCTTCATCGGTTC+AGG | + | Chr4:71084869-71084888 | None:intergenic | 50.0% |
| !! | GATGACCCGACCGATTTTGA+TGG | + | Chr4:71084474-71084493 | None:intergenic | 50.0% |
| AAAATCGGTCGGGTCATCCG+CGG | - | Chr4:71084476-71084495 | MsG0480022320.01.T01:intron | 55.0% | |
| CCATCACCAACACGCTCTTC+TGG | + | Chr4:71085535-71085554 | None:intergenic | 55.0% | |
| CGAAGAATGTGAGGGTGACG+AGG | - | Chr4:71084951-71084970 | MsG0480022320.01.T01:CDS | 55.0% | |
| GGATCGACCTGAACCGATGA+AGG | - | Chr4:71084859-71084878 | MsG0480022320.01.T01:CDS | 55.0% | |
| GGATGGTGTGAAGGAGAAGG+TGG | - | Chr4:71085252-71085271 | MsG0480022320.01.T01:CDS | 55.0% | |
| GGTTTCGCCTTTACGTGGAC+CGG | + | Chr4:71084429-71084448 | None:intergenic | 55.0% | |
| TCGTCACCAACGCACTCTTC+CGG | + | Chr4:71085582-71085601 | None:intergenic | 55.0% | |
| TGGTGTGAAGGAGAAGGTGG+AGG | - | Chr4:71085255-71085274 | MsG0480022320.01.T01:CDS | 55.0% | |
| TTACGAGGAATACGCGGAGC+AGG | - | Chr4:71084882-71084901 | MsG0480022320.01.T01:CDS | 55.0% | |
| ! | AAACAAGGGGCGGTGCTAAG+GGG | - | Chr4:71085380-71085399 | MsG0480022320.01.T01:CDS | 55.0% |
| ! | AGGTGGGTTTCGCCTTTACG+TGG | + | Chr4:71084434-71084453 | None:intergenic | 55.0% |
| ! | CCAGAAGAGCGTGTTGGTGA+TGG | - | Chr4:71085532-71085551 | MsG0480022320.01.T01:CDS | 55.0% |
| ! | CGAGGAGTGTGAGGATGACA+AGG | - | Chr4:71085281-71085300 | MsG0480022320.01.T01:CDS | 55.0% |
| ! | GAAAACAAGGGGCGGTGCTA+AGG | - | Chr4:71085378-71085397 | MsG0480022320.01.T01:CDS | 55.0% |
| !! | GACCCGACCGATTTTGATGG+TGG | + | Chr4:71084471-71084490 | None:intergenic | 55.0% |
| GACGTACTCGCGGAGTCTCT+CGG | + | Chr4:71085870-71085889 | None:intergenic | 60.0% | |
| TGATCGGGAGGTTGTTGCCG+CGG | + | Chr4:71084496-71084515 | None:intergenic | 60.0% | |
| TTCCTCGCCGGTCCACGTAA+AGG | - | Chr4:71084419-71084438 | MsG0480022320.01.T01:CDS | 60.0% | |
| AGGAGAAGGTGGAGGAGCCG+AGG | - | Chr4:71085263-71085282 | MsG0480022320.01.T01:CDS | 65.0% | |
| ! | TGGAGGAGCCGAGGAGTGTG+AGG | - | Chr4:71085272-71085291 | MsG0480022320.01.T01:CDS | 65.0% |
| CGCCTTTACGTGGACCGGCG+AGG | + | Chr4:71084424-71084443 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 71084380 | 71085934 | 71084380 | ID=MsG0480022320.01;Name=MsG0480022320.01 |
| Chr4 | mRNA | 71084380 | 71085934 | 71084380 | ID=MsG0480022320.01.T01;Parent=MsG0480022320.01;Name=MsG0480022320.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|3|0|416 |
| Chr4 | exon | 71085058 | 71085934 | 71085058 | ID=MsG0480022320.01.T01:exon:2405;Parent=MsG0480022320.01.T01 |
| Chr4 | exon | 71084720 | 71084979 | 71084720 | ID=MsG0480022320.01.T01:exon:2404;Parent=MsG0480022320.01.T01 |
| Chr4 | exon | 71084380 | 71084493 | 71084380 | ID=MsG0480022320.01.T01:exon:2403;Parent=MsG0480022320.01.T01 |
| Chr4 | CDS | 71085058 | 71085934 | 71085058 | ID=MsG0480022320.01.T01:cds;Parent=MsG0480022320.01.T01 |
| Chr4 | CDS | 71084720 | 71084979 | 71084720 | ID=MsG0480022320.01.T01:cds;Parent=MsG0480022320.01.T01 |
| Chr4 | CDS | 71084380 | 71084493 | 71084380 | ID=MsG0480022320.01.T01:cds;Parent=MsG0480022320.01.T01 |
| Gene Sequence |
| Protein sequence |
