Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038945.01.T01 | XP_013443248.1 | 85.468 | 406 | 36 | 9 | 1 | 399 | 1 | 390 | 0 | 629 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048800.01 | MsG0780038945.01 | -0.856475 | 3.138082e-62 | 7.499875e-59 |
MsG0080048948.01 | MsG0780038945.01 | -0.801942 | 7.097626e-49 | 3.432964e-46 |
MsG0080049076.01 | MsG0780038945.01 | -0.813172 | 2.927513e-51 | 1.897887e-48 |
MsG0180000076.01 | MsG0780038945.01 | 0.832243 | 1.056540e-55 | 1.173983e-52 |
MsG0180001925.01 | MsG0780038945.01 | -0.821262 | 4.434127e-53 | 3.589531e-50 |
MsG0180002276.01 | MsG0780038945.01 | 0.919682 | 3.318170e-87 | 1.078187e-82 |
MsG0180004320.01 | MsG0780038945.01 | 0.810998 | 8.720081e-51 | 5.336182e-48 |
MsG0180004752.01 | MsG0780038945.01 | 0.803502 | 3.381035e-49 | 1.701902e-46 |
MsG0180005835.01 | MsG0780038945.01 | 0.802110 | 6.554311e-49 | 3.183829e-46 |
MsG0280006420.01 | MsG0780038945.01 | 0.806804 | 6.884058e-50 | 3.771768e-47 |
MsG0280010794.01 | MsG0780038945.01 | 0.815301 | 9.918042e-52 | 6.812144e-49 |
MsG0280010868.01 | MsG0780038945.01 | 0.861719 | 8.418439e-64 | 2.403992e-60 |
MsG0380012472.01 | MsG0780038945.01 | 0.801132 | 1.040212e-48 | 4.929659e-46 |
MsG0380013945.01 | MsG0780038945.01 | -0.800448 | 1.434554e-48 | 6.681225e-46 |
MsG0380013953.01 | MsG0780038945.01 | -0.818104 | 2.332663e-52 | 1.730021e-49 |
MsG0380013957.01 | MsG0780038945.01 | -0.805608 | 1.229886e-49 | 6.535069e-47 |
MsG0380013967.01 | MsG0780038945.01 | -0.805522 | 1.281687e-49 | 6.795248e-47 |
MsG0380014006.01 | MsG0780038945.01 | -0.814115 | 1.815287e-51 | 1.207403e-48 |
MsG0380014161.01 | MsG0780038945.01 | 0.804384 | 2.217197e-49 | 1.141604e-46 |
MsG0380014171.01 | MsG0780038945.01 | 0.855237 | 7.219881e-62 | 1.655538e-58 |
MsG0380014754.01 | MsG0780038945.01 | 0.813973 | 1.951383e-51 | 1.292922e-48 |
MsG0680034392.01 | MsG0780038945.01 | 0.807435 | 5.061198e-50 | 2.818755e-47 |
MsG0680034395.01 | MsG0780038945.01 | 0.816587 | 5.122224e-52 | 3.644226e-49 |
MsG0480018788.01 | MsG0780038945.01 | -0.817235 | 3.663106e-52 | 2.652824e-49 |
MsG0480018990.01 | MsG0780038945.01 | 0.818016 | 2.442213e-52 | 1.806930e-49 |
MsG0480019277.01 | MsG0780038945.01 | 0.816802 | 4.583263e-52 | 3.280023e-49 |
MsG0480019588.01 | MsG0780038945.01 | 0.848060 | 7.793768e-60 | 1.412753e-56 |
MsG0480020263.01 | MsG0780038945.01 | 0.804867 | 1.757338e-49 | 9.162798e-47 |
MsG0480023450.01 | MsG0780038945.01 | 0.819007 | 1.455507e-52 | 1.106901e-49 |
MsG0480023674.01 | MsG0780038945.01 | -0.807565 | 4.750368e-50 | 2.654518e-47 |
MsG0480023897.01 | MsG0780038945.01 | 0.839426 | 1.596391e-57 | 2.203854e-54 |
MsG0580024478.01 | MsG0780038945.01 | 0.821639 | 3.627206e-53 | 2.967590e-50 |
MsG0380016018.01 | MsG0780038945.01 | 0.801034 | 1.089451e-48 | 5.150307e-46 |
MsG0380016110.01 | MsG0780038945.01 | 0.807128 | 5.880837e-50 | 3.249075e-47 |
MsG0380017881.01 | MsG0780038945.01 | 0.856970 | 2.244089e-62 | 5.451565e-59 |
MsG0380017935.01 | MsG0780038945.01 | -0.816094 | 6.601211e-52 | 4.633869e-49 |
MsG0380018007.01 | MsG0780038945.01 | 0.871029 | 9.326605e-67 | 3.706346e-63 |
MsG0580026606.01 | MsG0780038945.01 | 0.837206 | 5.958294e-57 | 7.684290e-54 |
MsG0580029623.01 | MsG0780038945.01 | 0.811530 | 6.686613e-51 | 4.149193e-48 |
MsG0580030019.01 | MsG0780038945.01 | 0.852997 | 3.197473e-61 | 6.806348e-58 |
MsG0580030179.01 | MsG0780038945.01 | 0.819406 | 1.180975e-52 | 9.079775e-50 |
MsG0280006884.01 | MsG0780038945.01 | 0.807155 | 5.801778e-50 | 3.207825e-47 |
MsG0280007089.01 | MsG0780038945.01 | 0.813794 | 2.136778e-51 | 1.408945e-48 |
MsG0280007983.01 | MsG0780038945.01 | 0.817585 | 3.054978e-52 | 2.233736e-49 |
MsG0280009241.01 | MsG0780038945.01 | 0.823818 | 1.128514e-53 | 9.822596e-51 |
MsG0280010173.01 | MsG0780038945.01 | 0.865683 | 4.944204e-65 | 1.622869e-61 |
MsG0780038421.01 | MsG0780038945.01 | 0.806600 | 7.602148e-50 | 4.143297e-47 |
MsG0780038837.01 | MsG0780038945.01 | 0.844926 | 5.585949e-59 | 9.158127e-56 |
MsG0780038945.01 | MsG0780039462.01 | -0.817189 | 3.752581e-52 | 2.714115e-49 |
MsG0780038945.01 | MsG0780039821.01 | -0.802157 | 6.409660e-49 | 3.117384e-46 |
MsG0780038945.01 | MsG0780040144.01 | 0.812551 | 4.005336e-51 | 2.554319e-48 |
MsG0780038945.01 | MsG0780040216.01 | 0.807173 | 5.751435e-50 | 3.181477e-47 |
MsG0780038945.01 | MsG0780040266.01 | 0.808827 | 2.557271e-50 | 1.477116e-47 |
MsG0780038945.01 | MsG0780040543.01 | 0.829896 | 3.982526e-55 | 4.131136e-52 |
MsG0780038945.01 | MsG0780041637.01 | -0.834934 | 2.248509e-56 | 2.708339e-53 |
MsG0780038945.01 | MsG0780041705.01 | 0.865465 | 5.789769e-65 | 1.885494e-61 |
MsG0780038945.01 | MsG0880042046.01 | 0.802283 | 6.038319e-49 | 2.946311e-46 |
MsG0780038945.01 | MsG0880042494.01 | 0.835107 | 2.034650e-56 | 2.463176e-53 |
MsG0780038945.01 | MsG0880042495.01 | 0.800105 | 1.684286e-48 | 7.776566e-46 |
MsG0780038945.01 | MsG0880042927.01 | 0.804840 | 1.781141e-49 | 9.279865e-47 |
MsG0780038945.01 | MsG0880045341.01 | 0.805101 | 1.570146e-49 | 8.235361e-47 |
MsG0780038945.01 | MsG0880046165.01 | 0.850906 | 1.254133e-60 | 2.494571e-57 |
MsG0780038945.01 | MsG0880046331.01 | -0.802183 | 6.329852e-49 | 3.080517e-46 |
MsG0780038945.01 | MsG0880046817.01 | 0.810725 | 9.992525e-51 | 6.069806e-48 |
MsG0780038945.01 | MsG0880047431.01 | 0.800714 | 1.266140e-48 | 5.936678e-46 |
MsG0780038945.01 | MsG0880047466.01 | 0.819865 | 9.279232e-53 | 7.226241e-50 |
MsG0780038945.01 | MsG0880047598.01 | 0.805827 | 1.106101e-49 | 5.910730e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038945.01.T01 | MTR_0027s0090 | 85.468 | 406 | 36 | 9 | 1 | 399 | 1 | 390 | 0.0 | 629 |
MsG0780038945.01.T01 | MTR_4g019840 | 29.781 | 366 | 171 | 16 | 51 | 399 | 9 | 305 | 2.78e-22 | 96.7 |
MsG0780038945.01.T01 | MTR_5g081460 | 32.642 | 386 | 189 | 18 | 44 | 399 | 18 | 362 | 1.30e-16 | 80.9 |
MsG0780038945.01.T01 | MTR_2g097800 | 39.370 | 127 | 53 | 5 | 278 | 399 | 214 | 321 | 1.02e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780038945.01.T01 | AT3G54000 | 30.751 | 413 | 200 | 21 | 5 | 399 | 8 | 352 | 5.75e-20 | 90.9 |
MsG0780038945.01.T01 | AT3G54000 | 32.558 | 344 | 166 | 18 | 5 | 330 | 8 | 303 | 2.38e-19 | 88.6 |
MsG0780038945.01.T01 | AT3G54000 | 30.650 | 323 | 159 | 17 | 5 | 310 | 8 | 282 | 4.55e-12 | 67.0 |
Find 109 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGAAAATGTGAAGGGATTT+TGG | 0.181897 | 7:-55637305 | None:intergenic |
TTTAATAGAGGAAAAGAAAA+AGG | 0.220430 | 7:-55637266 | None:intergenic |
CTATATAGTCTTCAAGCTTT+AGG | 0.234041 | 7:-55638899 | None:intergenic |
CTCTCCCATGTTTCGCATTT+CGG | 0.242451 | 7:+55637218 | MsG0780038945.01.T01:five_prime_UTR |
CAATCAACCCTATGTGCTTT+TGG | 0.244653 | 7:+55637793 | MsG0780038945.01.T01:CDS |
CTGATAGGCTGAACGCAATA+AGG | 0.267631 | 7:+55638181 | MsG0780038945.01.T01:CDS |
GTCTTCAAGCTTTAGGTTAA+GGG | 0.268229 | 7:-55638892 | None:intergenic |
TCCACCTCTAATGTTGAAAA+TGG | 0.300073 | 7:+55638960 | MsG0780038945.01.T01:CDS |
CTGTAATACCACTGCAAATC+TGG | 0.300724 | 7:-55639768 | None:intergenic |
AGTCTTCAAGCTTTAGGTTA+AGG | 0.313871 | 7:-55638893 | None:intergenic |
TGCTGCTGGCTGAGGCCTGC+TGG | 0.319876 | 7:-55639266 | None:intergenic |
TAATAATAATAGAAGATAAA+TGG | 0.327212 | 7:+55639494 | MsG0780038945.01.T01:three_prime_UTR |
AACAACAACGTTGCTGGTTT+AGG | 0.336273 | 7:+55638288 | MsG0780038945.01.T01:CDS |
GCATTCTCACAAACACCATT+AGG | 0.337817 | 7:-55637859 | None:intergenic |
ATTTGGATGACGGTGAGTTC+TGG | 0.349881 | 7:+55637396 | MsG0780038945.01.T01:CDS |
ATTTCATTGCTCACTGCTGC+TGG | 0.359817 | 7:-55639280 | None:intergenic |
AGGGTTGTGGAGTTTGAATT+TGG | 0.367866 | 7:-55638356 | None:intergenic |
TTGCTCACTGCTGCTGGCTG+AGG | 0.373008 | 7:-55639274 | None:intergenic |
GGAAATTGAAGGGAAAGAAA+AGG | 0.375834 | 7:-55637330 | None:intergenic |
GTTATGATTCTCAGAGGCTT+TGG | 0.379710 | 7:-55637666 | None:intergenic |
CTGTTGCACCTCCAAGGCAT+AGG | 0.394744 | 7:+55639200 | MsG0780038945.01.T01:CDS |
GTTGAATTTCTTGATTCAAC+AGG | 0.398365 | 7:-55638447 | None:intergenic |
GGGGTATGCAGAAGCAAAAT+GGG | 0.399292 | 7:+55638205 | MsG0780038945.01.T01:CDS |
GTTTCGCATTTCGGTAATCA+TGG | 0.406161 | 7:+55637227 | MsG0780038945.01.T01:five_prime_UTR |
TCAAGCCAAGGTAGCCCTAA+TGG | 0.411212 | 7:+55637844 | MsG0780038945.01.T01:CDS |
AGCGAAAGCGAAGAAGGTTT+CGG | 0.413750 | 7:-55637473 | None:intergenic |
GAAATTGAAGGGAAAGAAAA+GGG | 0.433253 | 7:-55637329 | None:intergenic |
AATAATAATAAATTGGTTTG+TGG | 0.433439 | 7:+55639713 | MsG0780038945.01.T01:three_prime_UTR |
GCAGCAGCAACAATACCAGC+AGG | 0.436574 | 7:+55639251 | MsG0780038945.01.T01:CDS |
AGGGCATGCGCCACTCTAGC+TGG | 0.436782 | 7:-55638873 | None:intergenic |
TGATAGGCTGAACGCAATAA+GGG | 0.441364 | 7:+55638182 | MsG0780038945.01.T01:CDS |
AGGGGATTTGATGTAACAAA+AGG | 0.449526 | 7:+55639407 | MsG0780038945.01.T01:three_prime_UTR |
CATTCTCACAAACACCATTA+GGG | 0.451029 | 7:-55637858 | None:intergenic |
AAATAATGTTAGGAGCCTCT+TGG | 0.453899 | 7:+55639540 | MsG0780038945.01.T01:three_prime_UTR |
GGGGAAGAAGAATTTCTTTG+AGG | 0.454444 | 7:-55637961 | None:intergenic |
AAAGCTTGAAGACTATATAG+TGG | 0.470534 | 7:+55638902 | MsG0780038945.01.T01:CDS |
ACATTATTACCCCTATGCCT+TGG | 0.482077 | 7:-55639211 | None:intergenic |
TTGAAAAGCGAAAGCGAAGA+AGG | 0.482963 | 7:-55637479 | None:intergenic |
AATGGTTATGGTAGCAGCAC+TGG | 0.484581 | 7:+55638402 | MsG0780038945.01.T01:CDS |
GGAGGAAGAAATGTTGTTGA+TGG | 0.488016 | 7:+55638255 | MsG0780038945.01.T01:CDS |
TTATTACCCCTATGCCTTGG+AGG | 0.489609 | 7:-55639208 | None:intergenic |
TGTTGCACCTCCAAGGCATA+GGG | 0.498023 | 7:+55639201 | MsG0780038945.01.T01:CDS |
TGTTGAGCATGTTGTAGTGT+TGG | 0.499882 | 7:-55638330 | None:intergenic |
GTCATTTCCAAAAGCACATA+GGG | 0.500818 | 7:-55637800 | None:intergenic |
TCAGAACAAGCGAATCCATA+AGG | 0.503685 | 7:-55637527 | None:intergenic |
TTATTCATAGCAAGTAACTA+AGG | 0.504465 | 7:-55639817 | None:intergenic |
ATGATGAAAATGATATGAAA+TGG | 0.513671 | 7:+55639336 | MsG0780038945.01.T01:three_prime_UTR |
AAACACCATTAGGGCTACCT+TGG | 0.514969 | 7:-55637849 | None:intergenic |
TTTCAGCAAAGACAAACAAA+TGG | 0.515645 | 7:+55638234 | MsG0780038945.01.T01:CDS |
AGCAAGTAACTAAGGTGGAC+AGG | 0.516303 | 7:-55639809 | None:intergenic |
AAATGGTCCTTTGATTCGCT+TGG | 0.517299 | 7:+55639353 | MsG0780038945.01.T01:three_prime_UTR |
TGTAGCTTGTGCAACTGCAT+TGG | 0.518913 | 7:+55638848 | MsG0780038945.01.T01:intron |
TTTCGCATTTCGGTAATCAT+GGG | 0.519762 | 7:+55637228 | MsG0780038945.01.T01:five_prime_UTR |
GGGTATGCAGAAGCAAAATG+GGG | 0.523341 | 7:+55638206 | MsG0780038945.01.T01:CDS |
TAGGTTTGTCATCATCTGCA+TGG | 0.523719 | 7:+55638307 | MsG0780038945.01.T01:CDS |
GATTACCGAAATGCGAAACA+TGG | 0.528517 | 7:-55637223 | None:intergenic |
ACAGCTCTCATGTAGGGTTG+TGG | 0.529286 | 7:-55638369 | None:intergenic |
GTCATCCAAATTCTCAGCCA+TGG | 0.531206 | 7:-55637384 | None:intergenic |
GAATCATAACAACAATAACT+TGG | 0.540471 | 7:+55637679 | MsG0780038945.01.T01:CDS |
GGCAACAACAAATTGCTGAT+AGG | 0.541898 | 7:+55638166 | MsG0780038945.01.T01:CDS |
GAAGCAGCAAGAGAATCAAT+TGG | 0.541993 | 7:-55637560 | None:intergenic |
TTTGGAGGGTAAAGTAATAG+GGG | 0.542539 | 7:-55637980 | None:intergenic |
AAGCTTGAAGACTATATAGT+GGG | 0.550779 | 7:+55638903 | MsG0780038945.01.T01:CDS |
AATGCTACCAAGCGAATCAA+AGG | 0.551005 | 7:-55639360 | None:intergenic |
TGTCATTTCCAAAAGCACAT+AGG | 0.552956 | 7:-55637801 | None:intergenic |
GGACAGGTTGGCATCAAAGA+AGG | 0.554332 | 7:-55639793 | None:intergenic |
TGTGTCGTCACCGTCGTCGT+CGG | 0.554477 | 7:-55637438 | None:intergenic |
AGGAAAACAGCTCTCATGTA+GGG | 0.557045 | 7:-55638375 | None:intergenic |
TATGGTAGCAGCACTGGCAC+TGG | 0.560323 | 7:+55638408 | MsG0780038945.01.T01:CDS |
GGCTTTGACCAGATTTGCAG+TGG | 0.562137 | 7:+55639760 | MsG0780038945.01.T01:three_prime_UTR |
CAGAGGCTTTGGAATCAACA+TGG | 0.562511 | 7:-55637655 | None:intergenic |
TAGCTGCTGTTGCACCTCCA+AGG | 0.563262 | 7:+55639194 | MsG0780038945.01.T01:CDS |
TGCATTGGTTCCAGCTAGAG+TGG | 0.566049 | 7:+55638863 | MsG0780038945.01.T01:CDS |
AAAAGGGAGAGAAAATGTGA+AGG | 0.566760 | 7:-55637313 | None:intergenic |
CGCAAGGGTTCTTCAAGCCA+AGG | 0.570759 | 7:+55637832 | MsG0780038945.01.T01:CDS |
AAGGAAAACAGCTCTCATGT+AGG | 0.571063 | 7:-55638376 | None:intergenic |
TTTCTTGATTCAACAGGACG+AGG | 0.572592 | 7:-55638441 | None:intergenic |
AAAGGGAGAGAAAATGTGAA+GGG | 0.576120 | 7:-55637312 | None:intergenic |
AAATCAAGCTTCCACAGGAG+TGG | 0.577332 | 7:+55639299 | MsG0780038945.01.T01:CDS |
AGTAACTAAGGTGGACAGGT+TGG | 0.580001 | 7:-55639805 | None:intergenic |
CAATGAAATCAAGCTTCCAC+AGG | 0.589243 | 7:+55639294 | MsG0780038945.01.T01:CDS |
GGTATGCAGAAGCAAAATGG+GGG | 0.592001 | 7:+55638207 | MsG0780038945.01.T01:CDS |
ATAGGCTGAACGCAATAAGG+GGG | 0.593373 | 7:+55638184 | MsG0780038945.01.T01:CDS |
TGATAATGAGAAAGTGATTG+TGG | 0.597158 | 7:-55638033 | None:intergenic |
GATAGGCTGAACGCAATAAG+GGG | 0.601595 | 7:+55638183 | MsG0780038945.01.T01:CDS |
CATCAGTACGTCCACTCCTG+TGG | 0.602987 | 7:-55639310 | None:intergenic |
GATGCAAGTGTTGTTGCGGC+TGG | 0.606152 | 7:-55638929 | None:intergenic |
AAATGACAGCAAATGCCGCA+AGG | 0.606582 | 7:+55637816 | MsG0780038945.01.T01:CDS |
CAGCAAAGACAAACAAATGG+AGG | 0.610080 | 7:+55638237 | MsG0780038945.01.T01:CDS |
TTGCTATGAATAATAATACA+AGG | 0.610972 | 7:+55639827 | MsG0780038945.01.T01:three_prime_UTR |
AATGACAGCAAATGCCGCAA+GGG | 0.612224 | 7:+55637817 | MsG0780038945.01.T01:CDS |
TGCTACCATAACCATTTCCA+AGG | 0.612385 | 7:-55638395 | None:intergenic |
GGTCATTAGAAAGTCTCTCA+AGG | 0.612790 | 7:+55639623 | MsG0780038945.01.T01:three_prime_UTR |
ATTACCGAAATGCGAAACAT+GGG | 0.619209 | 7:-55637222 | None:intergenic |
TAGGCTGAACGCAATAAGGG+GGG | 0.621088 | 7:+55638185 | MsG0780038945.01.T01:CDS |
ATTGTTGTTATGATTCTCAG+AGG | 0.625609 | 7:-55637672 | None:intergenic |
TTTGGAATCAACATGGAGAG+AGG | 0.627829 | 7:-55637648 | None:intergenic |
TTCATAGCAAGTAACTAAGG+TGG | 0.641022 | 7:-55639814 | None:intergenic |
CAGTTTCTCTCCGACGACGA+CGG | 0.644936 | 7:+55637428 | MsG0780038945.01.T01:CDS |
AAACGATGCAAGTGTTGTTG+CGG | 0.650274 | 7:-55638933 | None:intergenic |
AAAGCACATAGGGTTGATTG+TGG | 0.656361 | 7:-55637790 | None:intergenic |
ATGCAACAGATTCAAAGTAG+AGG | 0.656365 | 7:-55637890 | None:intergenic |
ATGGCTGAGAATTTGGATGA+CGG | 0.669713 | 7:+55637386 | MsG0780038945.01.T01:CDS |
AGGCTGAACGCAATAAGGGG+GGG | 0.672681 | 7:+55638186 | MsG0780038945.01.T01:CDS |
GTTGCACCTCCAAGGCATAG+GGG | 0.686212 | 7:+55639202 | MsG0780038945.01.T01:CDS |
AGCTTGAAGACTATATAGTG+GGG | 0.692039 | 7:+55638904 | MsG0780038945.01.T01:CDS |
CTTGGCTTGAAGAACCCTTG+CGG | 0.700347 | 7:-55637831 | None:intergenic |
TCGTCGGAGAGAAACTGCGG+CGG | 0.707718 | 7:-55637422 | None:intergenic |
TCGTCGTCGGAGAGAAACTG+CGG | 0.728597 | 7:-55637425 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTTTATTTATTTAATCAAAA+GGG | + | Chr7:55639099-55639118 | MsG0780038945.01.T01:intron | 10.0% |
!! | TAATAATAATAGAAGATAAA+TGG | + | Chr7:55639494-55639513 | MsG0780038945.01.T01:three_prime_UTR | 10.0% |
!! | TGTTTATTTATTTAATCAAA+AGG | + | Chr7:55639098-55639117 | MsG0780038945.01.T01:intron | 10.0% |
!! | TTTATTTATTTAATCAAAAG+GGG | + | Chr7:55639100-55639119 | MsG0780038945.01.T01:intron | 10.0% |
!!! | TTATATATTTTTTCCTTTTA+GGG | + | Chr7:55637722-55637741 | MsG0780038945.01.T01:intron | 10.0% |
!!! | TTTATATATTTTTTCCTTTT+AGG | + | Chr7:55637721-55637740 | MsG0780038945.01.T01:intron | 10.0% |
!! | AAATTATTAAATATCACAAC+CGG | - | Chr7:55638765-55638784 | None:intergenic | 15.0% |
!! | GGGTAATAATAATAATAAAT+TGG | + | Chr7:55639706-55639725 | MsG0780038945.01.T01:three_prime_UTR | 15.0% |
!! | TTATTTATTTAATCAAAAGG+GGG | + | Chr7:55639101-55639120 | MsG0780038945.01.T01:intron | 15.0% |
!!! | AAATCTCGTATTTTTAATAA+TGG | + | Chr7:55638090-55638109 | MsG0780038945.01.T01:intron | 15.0% |
!!! | AATAATAATAAATTGGTTTG+TGG | + | Chr7:55639713-55639732 | MsG0780038945.01.T01:three_prime_UTR | 15.0% |
!!! | AATCTCGTATTTTTAATAAT+GGG | + | Chr7:55638091-55638110 | MsG0780038945.01.T01:intron | 15.0% |
!!! | ATTGAGTATTTTTTTTTTGA+AGG | + | Chr7:55639128-55639147 | MsG0780038945.01.T01:intron | 15.0% |
!!! | TTGAGTATTTTTTTTTTGAA+GGG | + | Chr7:55639129-55639148 | MsG0780038945.01.T01:intron | 15.0% |
!!! | TTTTGTTTATCTTTTTTGTT+TGG | + | Chr7:55639675-55639694 | MsG0780038945.01.T01:three_prime_UTR | 15.0% |
!!! | TTTTTTGTTTGGTTTTATTA+GGG | + | Chr7:55639686-55639705 | MsG0780038945.01.T01:three_prime_UTR | 15.0% |
!! | AAAATTAACATCATCATCAT+GGG | - | Chr7:55638498-55638517 | None:intergenic | 20.0% |
!! | ACAATGAAAAAATTAAGAAG+GGG | + | Chr7:55639739-55639758 | MsG0780038945.01.T01:three_prime_UTR | 20.0% |
!! | AGACAATGAAAAAATTAAGA+AGG | + | Chr7:55639737-55639756 | MsG0780038945.01.T01:three_prime_UTR | 20.0% |
!! | ATGATGAAAATGATATGAAA+TGG | + | Chr7:55639336-55639355 | MsG0780038945.01.T01:three_prime_UTR | 20.0% |
!! | GACAATGAAAAAATTAAGAA+GGG | + | Chr7:55639738-55639757 | MsG0780038945.01.T01:three_prime_UTR | 20.0% |
!! | TATTTATTTAATCAAAAGGG+GGG | + | Chr7:55639102-55639121 | MsG0780038945.01.T01:intron | 20.0% |
!! | TTAATAGAGGAAAAGAAAAA+GGG | - | Chr7:55637268-55637287 | None:intergenic | 20.0% |
!! | TTGCTATGAATAATAATACA+AGG | + | Chr7:55639827-55639846 | MsG0780038945.01.T01:three_prime_UTR | 20.0% |
!! | TTTAATAGAGGAAAAGAAAA+AGG | - | Chr7:55637269-55637288 | None:intergenic | 20.0% |
!!! | AAAATCTAGTTTATAAGAGA+GGG | - | Chr7:55639053-55639072 | None:intergenic | 20.0% |
!!! | AATGTTTTAATGCATTTAAG+AGG | + | Chr7:55638570-55638589 | MsG0780038945.01.T01:intron | 20.0% |
!!! | AGTTTTATAGAAGAAACAAT+AGG | + | Chr7:55639435-55639454 | MsG0780038945.01.T01:three_prime_UTR | 20.0% |
!!! | ATGTTTTAATGCATTTAAGA+GGG | + | Chr7:55638571-55638590 | MsG0780038945.01.T01:intron | 20.0% |
!!! | CTTTTTTGTTTGGTTTTATT+AGG | + | Chr7:55639685-55639704 | MsG0780038945.01.T01:three_prime_UTR | 20.0% |
!!! | TGAGTATTTTTTTTTTGAAG+GGG | + | Chr7:55639130-55639149 | MsG0780038945.01.T01:intron | 20.0% |
!!! | TTTAAAATGTTACACAACAA+TGG | + | Chr7:55638620-55638639 | MsG0780038945.01.T01:intron | 20.0% |
! | AAAAAACAGAGGAAATTGAA+GGG | - | Chr7:55637343-55637362 | None:intergenic | 25.0% |
! | AAGAGGCTAAAAATAATGTT+AGG | + | Chr7:55639530-55639549 | MsG0780038945.01.T01:three_prime_UTR | 25.0% |
! | AGAAATTCAACAAAAAAACC+AGG | + | Chr7:55638459-55638478 | MsG0780038945.01.T01:CDS | 25.0% |
! | CAAAATTAACATCATCATCA+TGG | - | Chr7:55638499-55638518 | None:intergenic | 25.0% |
! | CCTAAATCATAAACGAAAAA+CGG | - | Chr7:55638689-55638708 | None:intergenic | 25.0% |
! | CTAAATCATAAACGAAAAAC+GGG | - | Chr7:55638688-55638707 | None:intergenic | 25.0% |
! | GAATCATAACAACAATAACT+TGG | + | Chr7:55637679-55637698 | MsG0780038945.01.T01:CDS | 25.0% |
! | TTATTCATAGCAAGTAACTA+AGG | - | Chr7:55639820-55639839 | None:intergenic | 25.0% |
!! | ACTTTTTGTTCTTTTTGATG+AGG | + | Chr7:55639601-55639620 | MsG0780038945.01.T01:three_prime_UTR | 25.0% |
!! | CAAAATCTAGTTTATAAGAG+AGG | - | Chr7:55639054-55639073 | None:intergenic | 25.0% |
!! | CTTTTTGTTCTTTTTGATGA+GGG | + | Chr7:55639602-55639621 | MsG0780038945.01.T01:three_prime_UTR | 25.0% |
!!! | AACTTGGTATGCATTTTTTT+TGG | + | Chr7:55637695-55637714 | MsG0780038945.01.T01:intron | 25.0% |
!!! | AAGAAACAATAGGTCTTTTT+TGG | + | Chr7:55639445-55639464 | MsG0780038945.01.T01:three_prime_UTR | 25.0% |
!!! | ACTTGGTATGCATTTTTTTT+GGG | + | Chr7:55637696-55637715 | MsG0780038945.01.T01:intron | 25.0% |
!!! | GAGTATTTTTTTTTTGAAGG+GGG | + | Chr7:55639131-55639150 | MsG0780038945.01.T01:intron | 25.0% |
!!! | GTTTGTTAGGATTTTAATAG+AGG | - | Chr7:55637281-55637300 | None:intergenic | 25.0% |
!!! | TTTTAATTGTTTTGGATGTG+TGG | + | Chr7:55638738-55638757 | MsG0780038945.01.T01:intron | 25.0% |
AAAGCTTGAAGACTATATAG+TGG | + | Chr7:55638902-55638921 | MsG0780038945.01.T01:CDS | 30.0% | |
AAGCTTGAAGACTATATAGT+GGG | + | Chr7:55638903-55638922 | MsG0780038945.01.T01:CDS | 30.0% | |
ACAAGCTACAATCACAAAAT+TGG | - | Chr7:55638838-55638857 | None:intergenic | 30.0% | |
CAAAAAACAGAGGAAATTGA+AGG | - | Chr7:55637344-55637363 | None:intergenic | 30.0% | |
CTATATAGTCTTCAAGCTTT+AGG | - | Chr7:55638902-55638921 | None:intergenic | 30.0% | |
GAAAAGAAAAAGGGATTATG+TGG | - | Chr7:55637259-55637278 | None:intergenic | 30.0% | |
GAAATTGAAGGGAAAGAAAA+GGG | - | Chr7:55637332-55637351 | None:intergenic | 30.0% | |
GTTGAATTTCTTGATTCAAC+AGG | - | Chr7:55638450-55638469 | None:intergenic | 30.0% | |
TTTCAGCAAAGACAAACAAA+TGG | + | Chr7:55638234-55638253 | MsG0780038945.01.T01:CDS | 30.0% | |
! | AGTACCATTTTCAACATTAG+AGG | - | Chr7:55638967-55638986 | None:intergenic | 30.0% |
! | ATTGTTGTTATGATTCTCAG+AGG | - | Chr7:55637675-55637694 | None:intergenic | 30.0% |
! | TGATAATGAGAAAGTGATTG+TGG | - | Chr7:55638036-55638055 | None:intergenic | 30.0% |
! | TTAATGTACGTTTTTGCTAC+TGG | + | Chr7:55638715-55638734 | MsG0780038945.01.T01:intron | 30.0% |
!! | CCGTTTTTCGTTTATGATTT+AGG | + | Chr7:55638686-55638705 | MsG0780038945.01.T01:intron | 30.0% |
!! | TTTTGGAGGGTAAAGTAATA+GGG | - | Chr7:55637984-55638003 | None:intergenic | 30.0% |
!! | TTTTTGGAGGGTAAAGTAAT+AGG | - | Chr7:55637985-55638004 | None:intergenic | 30.0% |
!!! | ATGGTTTTTTGTTTAGCAAG+AGG | + | Chr7:55639513-55639532 | MsG0780038945.01.T01:three_prime_UTR | 30.0% |
!!! | CTTGGTATGCATTTTTTTTG+GGG | + | Chr7:55637697-55637716 | MsG0780038945.01.T01:intron | 30.0% |
!!! | GCTACTGGTTTTAATTGTTT+TGG | + | Chr7:55638730-55638749 | MsG0780038945.01.T01:intron | 30.0% |
!!! | GTTTTTATTGTCGTTTTGCA+GGG | + | Chr7:55637760-55637779 | MsG0780038945.01.T01:intron | 30.0% |
!!! | TCTTTTTTGGATGAAGATGT+AGG | + | Chr7:55639458-55639477 | MsG0780038945.01.T01:three_prime_UTR | 30.0% |
!!! | TGTACGTTTTTTTGCGTTTT+TGG | + | Chr7:55638543-55638562 | MsG0780038945.01.T01:intron | 30.0% |
AAAAGGGAGAGAAAATGTGA+AGG | - | Chr7:55637316-55637335 | None:intergenic | 35.0% | |
AAAGGGAGAGAAAATGTGAA+GGG | - | Chr7:55637315-55637334 | None:intergenic | 35.0% | |
AAATAATGTTAGGAGCCTCT+TGG | + | Chr7:55639540-55639559 | MsG0780038945.01.T01:three_prime_UTR | 35.0% | |
AAGAAAAAGGGATTATGTGG+AGG | - | Chr7:55637256-55637275 | None:intergenic | 35.0% | |
AATCCATAAGGAAAAAGCAG+AGG | - | Chr7:55637518-55637537 | None:intergenic | 35.0% | |
AGAAAAAGGGATTATGTGGA+GGG | - | Chr7:55637255-55637274 | None:intergenic | 35.0% | |
AGCTTGAAGACTATATAGTG+GGG | + | Chr7:55638904-55638923 | MsG0780038945.01.T01:CDS | 35.0% | |
AGGGGATTTGATGTAACAAA+AGG | + | Chr7:55639407-55639426 | MsG0780038945.01.T01:three_prime_UTR | 35.0% | |
ATGCAACAGATTCAAAGTAG+AGG | - | Chr7:55637893-55637912 | None:intergenic | 35.0% | |
ATGGGAAAAAAGTAATCACC+TGG | - | Chr7:55638480-55638499 | None:intergenic | 35.0% | |
ATTACCGAAATGCGAAACAT+GGG | - | Chr7:55637225-55637244 | None:intergenic | 35.0% | |
CAAAAAAGCTCAAATCAGCA+GGG | - | Chr7:55638011-55638030 | None:intergenic | 35.0% | |
CAAAACGCAAAAACCCTAAA+AGG | - | Chr7:55637738-55637757 | None:intergenic | 35.0% | |
CAGAGAGAAACAAAAAACAG+AGG | - | Chr7:55637354-55637373 | None:intergenic | 35.0% | |
CATTCTCACAAACACCATTA+GGG | - | Chr7:55637861-55637880 | None:intergenic | 35.0% | |
CCTCTTGGATTAAAAATCTC+AGG | + | Chr7:55639555-55639574 | MsG0780038945.01.T01:three_prime_UTR | 35.0% | |
CTCTCAAGGAAAGACAAAAA+TGG | + | Chr7:55639637-55639656 | MsG0780038945.01.T01:three_prime_UTR | 35.0% | |
GGAAATTGAAGGGAAAGAAA+AGG | - | Chr7:55637333-55637352 | None:intergenic | 35.0% | |
TCAAGGAAAGACAAAAATGG+TGG | + | Chr7:55639640-55639659 | MsG0780038945.01.T01:three_prime_UTR | 35.0% | |
TCCACCTCTAATGTTGAAAA+TGG | + | Chr7:55638960-55638979 | MsG0780038945.01.T01:CDS | 35.0% | |
TTCATAGCAAGTAACTAAGG+TGG | - | Chr7:55639817-55639836 | None:intergenic | 35.0% | |
TTTCGCATTTCGGTAATCAT+GGG | + | Chr7:55637228-55637247 | MsG0780038945.01.T01:five_prime_UTR | 35.0% | |
TTTGGAGGGTAAAGTAATAG+GGG | - | Chr7:55637983-55638002 | None:intergenic | 35.0% | |
! | ACCATTTTCAACATTAGAGG+TGG | - | Chr7:55638964-55638983 | None:intergenic | 35.0% |
! | ATTTTCCATGGCTGAGAATT+TGG | + | Chr7:55637379-55637398 | MsG0780038945.01.T01:exon | 35.0% |
! | CCTGAGATTTTTAATCCAAG+AGG | - | Chr7:55639558-55639577 | None:intergenic | 35.0% |
! | CTCTCTGTTTTCATTTTCCA+TGG | + | Chr7:55637367-55637386 | MsG0780038945.01.T01:exon | 35.0% |
! | GAGAAAATGTGAAGGGATTT+TGG | - | Chr7:55637308-55637327 | None:intergenic | 35.0% |
! | GTCATTTCCAAAAGCACATA+GGG | - | Chr7:55637803-55637822 | None:intergenic | 35.0% |
! | GTTTTCCTTGGAAATGGTTA+TGG | + | Chr7:55638390-55638409 | MsG0780038945.01.T01:CDS | 35.0% |
! | TGTCATTTCCAAAAGCACAT+AGG | - | Chr7:55637804-55637823 | None:intergenic | 35.0% |
!! | AGTCTTCAAGCTTTAGGTTA+AGG | - | Chr7:55638896-55638915 | None:intergenic | 35.0% |
!! | ATTCGCTTGGTAGCATTTTA+AGG | + | Chr7:55639366-55639385 | MsG0780038945.01.T01:three_prime_UTR | 35.0% |
!! | GGTAGCATTTTAAGGGATTT+GGG | + | Chr7:55639374-55639393 | MsG0780038945.01.T01:three_prime_UTR | 35.0% |
!! | GTAGCATTTTAAGGGATTTG+GGG | + | Chr7:55639375-55639394 | MsG0780038945.01.T01:three_prime_UTR | 35.0% |
!! | GTCTTCAAGCTTTAGGTTAA+GGG | - | Chr7:55638895-55638914 | None:intergenic | 35.0% |
!! | TAGCATTTTAAGGGATTTGG+GGG | + | Chr7:55639376-55639395 | MsG0780038945.01.T01:three_prime_UTR | 35.0% |
!! | TGGTAGCATTTTAAGGGATT+TGG | + | Chr7:55639373-55639392 | MsG0780038945.01.T01:three_prime_UTR | 35.0% |
!! | TTCGCTTGGTAGCATTTTAA+GGG | + | Chr7:55639367-55639386 | MsG0780038945.01.T01:three_prime_UTR | 35.0% |
!!! | AATGTGAAGGGATTTTGGTT+AGG | - | Chr7:55637303-55637322 | None:intergenic | 35.0% |
!!! | CGTTTTTATTGTCGTTTTGC+AGG | + | Chr7:55637759-55637778 | MsG0780038945.01.T01:intron | 35.0% |
!!! | GATTTTAGTTGCAGAGGATT+AGG | + | Chr7:55638145-55638164 | MsG0780038945.01.T01:intron | 35.0% |
!!! | GGATTTTGGTTAGGTTTGTT+AGG | - | Chr7:55637294-55637313 | None:intergenic | 35.0% |
!!! | GTTGATGATTTTAGTTGCAG+AGG | + | Chr7:55638139-55638158 | MsG0780038945.01.T01:intron | 35.0% |
AACAACAACAACAACGTTGC+TGG | + | Chr7:55638282-55638301 | MsG0780038945.01.T01:CDS | 40.0% | |
AAGGAAAACAGCTCTCATGT+AGG | - | Chr7:55638379-55638398 | None:intergenic | 40.0% | |
AATGCTACCAAGCGAATCAA+AGG | - | Chr7:55639363-55639382 | None:intergenic | 40.0% | |
ACATTATTACCCCTATGCCT+TGG | - | Chr7:55639214-55639233 | None:intergenic | 40.0% | |
AGGAAAACAGCTCTCATGTA+GGG | - | Chr7:55638378-55638397 | None:intergenic | 40.0% | |
AGGAAAGACAAAAATGGTGG+TGG | + | Chr7:55639643-55639662 | MsG0780038945.01.T01:three_prime_UTR | 40.0% | |
AGGGTTGTGGAGTTTGAATT+TGG | - | Chr7:55638359-55638378 | None:intergenic | 40.0% | |
ATGGCTGAGAATTTGGATGA+CGG | + | Chr7:55637386-55637405 | MsG0780038945.01.T01:CDS | 40.0% | |
CAATGAAATCAAGCTTCCAC+AGG | + | Chr7:55639294-55639313 | MsG0780038945.01.T01:CDS | 40.0% | |
CAGCAAAGACAAACAAATGG+AGG | + | Chr7:55638237-55638256 | MsG0780038945.01.T01:CDS | 40.0% | |
CTGTAATACCACTGCAAATC+TGG | - | Chr7:55639771-55639790 | None:intergenic | 40.0% | |
GAAGCAGCAAGAGAATCAAT+TGG | - | Chr7:55637563-55637582 | None:intergenic | 40.0% | |
GATTACCGAAATGCGAAACA+TGG | - | Chr7:55637226-55637245 | None:intergenic | 40.0% | |
GCAAAAAAGCTCAAATCAGC+AGG | - | Chr7:55638012-55638031 | None:intergenic | 40.0% | |
GCATTCTCACAAACACCATT+AGG | - | Chr7:55637862-55637881 | None:intergenic | 40.0% | |
GGAGGAAGAAATGTTGTTGA+TGG | + | Chr7:55638255-55638274 | MsG0780038945.01.T01:CDS | 40.0% | |
GGCAACAACAAATTGCTGAT+AGG | + | Chr7:55638166-55638185 | MsG0780038945.01.T01:CDS | 40.0% | |
GGGGAAGAAGAATTTCTTTG+AGG | - | Chr7:55637964-55637983 | None:intergenic | 40.0% | |
GGTCATTAGAAAGTCTCTCA+AGG | + | Chr7:55639623-55639642 | MsG0780038945.01.T01:three_prime_UTR | 40.0% | |
GTTATGATTCTCAGAGGCTT+TGG | - | Chr7:55637669-55637688 | None:intergenic | 40.0% | |
GTTTCGCATTTCGGTAATCA+TGG | + | Chr7:55637227-55637246 | MsG0780038945.01.T01:five_prime_UTR | 40.0% | |
TAGGTTTGTCATCATCTGCA+TGG | + | Chr7:55638307-55638326 | MsG0780038945.01.T01:CDS | 40.0% | |
TCAGAACAAGCGAATCCATA+AGG | - | Chr7:55637530-55637549 | None:intergenic | 40.0% | |
TGATAGGCTGAACGCAATAA+GGG | + | Chr7:55638182-55638201 | MsG0780038945.01.T01:CDS | 40.0% | |
TGCTACCATAACCATTTCCA+AGG | - | Chr7:55638398-55638417 | None:intergenic | 40.0% | |
TGTTGAGCATGTTGTAGTGT+TGG | - | Chr7:55638333-55638352 | None:intergenic | 40.0% | |
TTGAAAAGCGAAAGCGAAGA+AGG | - | Chr7:55637482-55637501 | None:intergenic | 40.0% | |
TTTCTTGATTCAACAGGACG+AGG | - | Chr7:55638444-55638463 | None:intergenic | 40.0% | |
! | AAACGATGCAAGTGTTGTTG+CGG | - | Chr7:55638936-55638955 | None:intergenic | 40.0% |
! | AAAGCACATAGGGTTGATTG+TGG | - | Chr7:55637793-55637812 | None:intergenic | 40.0% |
! | AAATGGTCCTTTGATTCGCT+TGG | + | Chr7:55639353-55639372 | MsG0780038945.01.T01:three_prime_UTR | 40.0% |
! | CAATCAACCCTATGTGCTTT+TGG | + | Chr7:55637793-55637812 | MsG0780038945.01.T01:CDS | 40.0% |
! | TTTGGAATCAACATGGAGAG+AGG | - | Chr7:55637651-55637670 | None:intergenic | 40.0% |
!! | AACAACAACGTTGCTGGTTT+AGG | + | Chr7:55638288-55638307 | MsG0780038945.01.T01:CDS | 40.0% |
!! | AAGACAAAAATGGTGGTGGA+TGG | + | Chr7:55639647-55639666 | MsG0780038945.01.T01:three_prime_UTR | 40.0% |
!! | AGACAAAAATGGTGGTGGAT+GGG | + | Chr7:55639648-55639667 | MsG0780038945.01.T01:three_prime_UTR | 40.0% |
!! | AGAGCTGTTTTCCTTGGAAA+TGG | + | Chr7:55638384-55638403 | MsG0780038945.01.T01:CDS | 40.0% |
!! | CAAATCAGCAGGGTTGTTTT+TGG | - | Chr7:55638001-55638020 | None:intergenic | 40.0% |
!! | TACATGAGAGCTGTTTTCCT+TGG | + | Chr7:55638378-55638397 | MsG0780038945.01.T01:CDS | 40.0% |
!! | TCGCTTTCGCTTTTCAACAA+TGG | + | Chr7:55637485-55637504 | MsG0780038945.01.T01:CDS | 40.0% |
!!! | ATTGTTTTGGATGTGTGGAC+CGG | + | Chr7:55638743-55638762 | MsG0780038945.01.T01:intron | 40.0% |
!!! | GATCCTCTGCTTTTTCCTTA+TGG | + | Chr7:55637512-55637531 | MsG0780038945.01.T01:CDS | 40.0% |
!!! | GATTTGGGGGAGTATTTTAG+GGG | + | Chr7:55639389-55639408 | MsG0780038945.01.T01:three_prime_UTR | 40.0% |
!!! | GGATTTGGGGGAGTATTTTA+GGG | + | Chr7:55639388-55639407 | MsG0780038945.01.T01:three_prime_UTR | 40.0% |
!!! | TTTATTGTCGTTTTGCAGGG+AGG | + | Chr7:55637763-55637782 | MsG0780038945.01.T01:intron | 40.0% |
AAACACCATTAGGGCTACCT+TGG | - | Chr7:55637852-55637871 | None:intergenic | 45.0% | |
AAATCAAGCTTCCACAGGAG+TGG | + | Chr7:55639299-55639318 | MsG0780038945.01.T01:CDS | 45.0% | |
AAATGACAGCAAATGCCGCA+AGG | + | Chr7:55637816-55637835 | MsG0780038945.01.T01:CDS | 45.0% | |
AATGACAGCAAATGCCGCAA+GGG | + | Chr7:55637817-55637836 | MsG0780038945.01.T01:CDS | 45.0% | |
AATGGTTATGGTAGCAGCAC+TGG | + | Chr7:55638402-55638421 | MsG0780038945.01.T01:CDS | 45.0% | |
AGCAAGTAACTAAGGTGGAC+AGG | - | Chr7:55639812-55639831 | None:intergenic | 45.0% | |
AGCGAAAGCGAAGAAGGTTT+CGG | - | Chr7:55637476-55637495 | None:intergenic | 45.0% | |
AGTAACTAAGGTGGACAGGT+TGG | - | Chr7:55639808-55639827 | None:intergenic | 45.0% | |
ATAGGCTGAACGCAATAAGG+GGG | + | Chr7:55638184-55638203 | MsG0780038945.01.T01:CDS | 45.0% | |
ATTTCATTGCTCACTGCTGC+TGG | - | Chr7:55639283-55639302 | None:intergenic | 45.0% | |
CTCTCCCATGTTTCGCATTT+CGG | + | Chr7:55637218-55637237 | MsG0780038945.01.T01:five_prime_UTR | 45.0% | |
CTGATAGGCTGAACGCAATA+AGG | + | Chr7:55638181-55638200 | MsG0780038945.01.T01:CDS | 45.0% | |
GATAGGCTGAACGCAATAAG+GGG | + | Chr7:55638183-55638202 | MsG0780038945.01.T01:CDS | 45.0% | |
GGGGTATGCAGAAGCAAAAT+GGG | + | Chr7:55638205-55638224 | MsG0780038945.01.T01:CDS | 45.0% | |
GGGTATGCAGAAGCAAAATG+GGG | + | Chr7:55638206-55638225 | MsG0780038945.01.T01:CDS | 45.0% | |
GGTATGCAGAAGCAAAATGG+GGG | + | Chr7:55638207-55638226 | MsG0780038945.01.T01:CDS | 45.0% | |
GTCATCCAAATTCTCAGCCA+TGG | - | Chr7:55637387-55637406 | None:intergenic | 45.0% | |
TTATTACCCCTATGCCTTGG+AGG | - | Chr7:55639211-55639230 | None:intergenic | 45.0% | |
! | ATTTGGATGACGGTGAGTTC+TGG | + | Chr7:55637396-55637415 | MsG0780038945.01.T01:CDS | 45.0% |
! | CGAAGAAGGTTTCGGTTTTG+TGG | - | Chr7:55637468-55637487 | None:intergenic | 45.0% |
! | TGTAGCTTGTGCAACTGCAT+TGG | + | Chr7:55638848-55638867 | MsG0780038945.01.T01:intron | 45.0% |
!! | AGAAGGTTTCGGTTTTGTGG+TGG | - | Chr7:55637465-55637484 | None:intergenic | 45.0% |
!! | CAGAGGCTTTGGAATCAACA+TGG | - | Chr7:55637658-55637677 | None:intergenic | 45.0% |
!!! | ATCAGCAGGGTTGTTTTTGG+AGG | - | Chr7:55637998-55638017 | None:intergenic | 45.0% |
!!! | GGGATTTGGGGGAGTATTTT+AGG | + | Chr7:55639387-55639406 | MsG0780038945.01.T01:three_prime_UTR | 45.0% |
!!! | TCAGCAGGGTTGTTTTTGGA+GGG | - | Chr7:55637997-55638016 | None:intergenic | 45.0% |
ACAGCTCTCATGTAGGGTTG+TGG | - | Chr7:55638372-55638391 | None:intergenic | 50.0% | |
TAGGCTGAACGCAATAAGGG+GGG | + | Chr7:55638185-55638204 | MsG0780038945.01.T01:CDS | 50.0% | |
TCAAGCCAAGGTAGCCCTAA+TGG | + | Chr7:55637844-55637863 | MsG0780038945.01.T01:CDS | 50.0% | |
TGTTGCACCTCCAAGGCATA+GGG | + | Chr7:55639201-55639220 | MsG0780038945.01.T01:CDS | 50.0% | |
! | CTTGGCTTGAAGAACCCTTG+CGG | - | Chr7:55637834-55637853 | None:intergenic | 50.0% |
! | GGACAGGTTGGCATCAAAGA+AGG | - | Chr7:55639796-55639815 | None:intergenic | 50.0% |
! | GGCTTTGACCAGATTTGCAG+TGG | + | Chr7:55639760-55639779 | MsG0780038945.01.T01:three_prime_UTR | 50.0% |
! | GGGGGTATGCAGAAGCAAAA+TGG | + | Chr7:55638204-55638223 | MsG0780038945.01.T01:CDS | 50.0% |
!! | TGCATTGGTTCCAGCTAGAG+TGG | + | Chr7:55638863-55638882 | MsG0780038945.01.T01:CDS | 50.0% |
AGGCTGAACGCAATAAGGGG+GGG | + | Chr7:55638186-55638205 | MsG0780038945.01.T01:CDS | 55.0% | |
CAGTTTCTCTCCGACGACGA+CGG | + | Chr7:55637428-55637447 | MsG0780038945.01.T01:CDS | 55.0% | |
CATCAGTACGTCCACTCCTG+TGG | - | Chr7:55639313-55639332 | None:intergenic | 55.0% | |
CGCAAGGGTTCTTCAAGCCA+AGG | + | Chr7:55637832-55637851 | MsG0780038945.01.T01:CDS | 55.0% | |
CTGTTGCACCTCCAAGGCAT+AGG | + | Chr7:55639200-55639219 | MsG0780038945.01.T01:CDS | 55.0% | |
GCAGCAGCAACAATACCAGC+AGG | + | Chr7:55639251-55639270 | MsG0780038945.01.T01:CDS | 55.0% | |
GTTGCACCTCCAAGGCATAG+GGG | + | Chr7:55639202-55639221 | MsG0780038945.01.T01:CDS | 55.0% | |
TAGCTGCTGTTGCACCTCCA+AGG | + | Chr7:55639194-55639213 | MsG0780038945.01.T01:CDS | 55.0% | |
TCGTCGTCGGAGAGAAACTG+CGG | - | Chr7:55637428-55637447 | None:intergenic | 55.0% | |
! | GATGCAAGTGTTGTTGCGGC+TGG | - | Chr7:55638932-55638951 | None:intergenic | 55.0% |
!! | TATGGTAGCAGCACTGGCAC+TGG | + | Chr7:55638408-55638427 | MsG0780038945.01.T01:CDS | 55.0% |
TCGTCGGAGAGAAACTGCGG+CGG | - | Chr7:55637425-55637444 | None:intergenic | 60.0% | |
TGTGTCGTCACCGTCGTCGT+CGG | - | Chr7:55637441-55637460 | None:intergenic | 60.0% | |
! | TTGCTCACTGCTGCTGGCTG+AGG | - | Chr7:55639277-55639296 | None:intergenic | 60.0% |
AGGGCATGCGCCACTCTAGC+TGG | - | Chr7:55638876-55638895 | None:intergenic | 65.0% | |
! | TGCTGCTGGCTGAGGCCTGC+TGG | - | Chr7:55639269-55639288 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 55637168 | 55639859 | 55637168 | ID=MsG0780038945.01;Name=MsG0780038945.01 |
Chr7 | mRNA | 55637168 | 55639859 | 55637168 | ID=MsG0780038945.01.T01;Parent=MsG0780038945.01;Name=MsG0780038945.01.T01;_AED=0.19;_eAED=0.19;_QI=218|1|1|1|1|1|5|529|399 |
Chr7 | exon | 55637168 | 55637700 | 55637168 | ID=MsG0780038945.01.T01:exon:7773;Parent=MsG0780038945.01.T01 |
Chr7 | exon | 55637781 | 55638071 | 55637781 | ID=MsG0780038945.01.T01:exon:7774;Parent=MsG0780038945.01.T01 |
Chr7 | exon | 55638153 | 55638480 | 55638153 | ID=MsG0780038945.01.T01:exon:7775;Parent=MsG0780038945.01.T01 |
Chr7 | exon | 55638853 | 55638981 | 55638853 | ID=MsG0780038945.01.T01:exon:7776;Parent=MsG0780038945.01.T01 |
Chr7 | exon | 55639194 | 55639859 | 55639194 | ID=MsG0780038945.01.T01:exon:7777;Parent=MsG0780038945.01.T01 |
Chr7 | five_prime_UTR | 55637168 | 55637385 | 55637168 | ID=MsG0780038945.01.T01:five_prime_utr;Parent=MsG0780038945.01.T01 |
Chr7 | CDS | 55637386 | 55637700 | 55637386 | ID=MsG0780038945.01.T01:cds;Parent=MsG0780038945.01.T01 |
Chr7 | CDS | 55637781 | 55638071 | 55637781 | ID=MsG0780038945.01.T01:cds;Parent=MsG0780038945.01.T01 |
Chr7 | CDS | 55638153 | 55638480 | 55638153 | ID=MsG0780038945.01.T01:cds;Parent=MsG0780038945.01.T01 |
Chr7 | CDS | 55638853 | 55638981 | 55638853 | ID=MsG0780038945.01.T01:cds;Parent=MsG0780038945.01.T01 |
Chr7 | CDS | 55639194 | 55639330 | 55639194 | ID=MsG0780038945.01.T01:cds;Parent=MsG0780038945.01.T01 |
Chr7 | three_prime_UTR | 55639331 | 55639859 | 55639331 | ID=MsG0780038945.01.T01:three_prime_utr;Parent=MsG0780038945.01.T01 |
Gene Sequence |
Protein sequence |