AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022343.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022343.01.T01 MTR_4g088495 99.738 381 1 0 1 381 457 837 0.0 753
MsG0480022343.01.T01 MTR_4g088495 99.475 381 2 0 1 381 77 457 0.0 751
MsG0480022343.01.T01 MTR_4g088495 99.475 381 2 0 1 381 153 533 0.0 751
MsG0480022343.01.T01 MTR_4g088495 99.475 381 2 0 1 381 229 609 0.0 751
MsG0480022343.01.T01 MTR_4g088495 99.475 381 2 0 1 381 305 685 0.0 751
MsG0480022343.01.T01 MTR_4g088495 99.475 381 2 0 1 381 381 761 0.0 751
MsG0480022343.01.T01 MTR_4g088495 99.213 381 3 0 1 381 1 381 0.0 747
MsG0480022343.01.T01 MTR_8g018230 99.738 381 1 0 1 381 153 533 0.0 753
MsG0480022343.01.T01 MTR_8g018230 99.475 381 2 0 1 381 1 381 0.0 751
MsG0480022343.01.T01 MTR_8g018230 99.475 381 2 0 1 381 77 457 0.0 751
MsG0480022343.01.T01 MTR_8g018230 99.738 381 1 0 1 381 77 457 0.0 753
MsG0480022343.01.T01 MTR_8g018230 99.475 381 2 0 1 381 1 381 0.0 751
MsG0480022343.01.T01 MTR_8g018230 99.738 381 1 0 1 381 77 457 0.0 753
MsG0480022343.01.T01 MTR_8g018230 99.475 381 2 0 1 381 1 381 0.0 751
MsG0480022343.01.T01 MTR_4g080797 99.738 381 1 0 1 381 1 381 0.0 753
MsG0480022343.01.T01 MTR_8g018230 99.738 381 1 0 1 381 1 381 0.0 753
MsG0480022343.01.T01 MTR_4g081010 99.475 381 2 0 1 381 153 533 0.0 752
MsG0480022343.01.T01 MTR_4g081010 99.475 381 2 0 1 381 1 381 0.0 751
MsG0480022343.01.T01 MTR_4g081010 99.475 381 2 0 1 381 77 457 0.0 751
MsG0480022343.01.T01 MTR_4g081010 99.475 381 2 0 1 381 1 381 0.0 752
MsG0480022343.01.T01 MTR_4g091580 99.475 381 2 0 1 381 1 381 0.0 751
MsG0480022343.01.T01 MTR_8g081020 99.737 380 1 0 1 380 1 380 0.0 750
MsG0480022343.01.T01 MTR_4g091580 99.213 381 3 0 1 381 153 533 0.0 749
MsG0480022343.01.T01 MTR_4g091580 98.950 381 4 0 1 381 1 381 0.0 746
MsG0480022343.01.T01 MTR_4g091580 98.950 381 4 0 1 381 77 457 0.0 746
MsG0480022343.01.T01 MTR_4g081010 99.344 305 2 0 77 381 1 305 0.0 603
MsG0480022343.01.T01 MTR_4g081010 99.671 304 1 0 1 304 1 304 0.0 601
MsG0480022343.01.T01 MTR_6g061930 94.098 305 3 1 77 381 1 290 0.0 561
MsG0480022343.01.T01 MTR_6g061930 93.770 305 4 1 1 305 1 290 0.0 558
MsG0480022343.01.T01 MTR_8g018230 88.197 305 1 1 77 381 1 270 0.0 517
MsG0480022343.01.T01 MTR_8g018230 87.869 305 2 1 1 305 1 270 0.0 514
MsG0480022343.01.T01 MTR_4g081010 99.590 244 1 0 1 244 1 244 1.77e-172 482
MsG0480022343.01.T01 MTR_4g081010 99.590 244 1 0 77 320 1 244 1.77e-172 482
MsG0480022343.01.T01 MTR_4g081010 99.127 229 2 0 153 381 1 229 5.53e-161 453
MsG0480022343.01.T01 MTR_7g116360 99.563 229 1 0 153 381 1 229 2.28e-162 454
MsG0480022343.01.T01 MTR_7g116360 99.127 229 2 0 1 229 1 229 2.51e-161 452
MsG0480022343.01.T01 MTR_7g116360 99.127 229 2 0 77 305 1 229 2.51e-161 452
MsG0480022343.01.T01 MTR_7g116360 99.563 229 1 0 153 381 49 277 3.17e-162 456
MsG0480022343.01.T01 MTR_7g116360 99.127 229 2 0 1 229 49 277 3.30e-161 453
MsG0480022343.01.T01 MTR_7g116360 99.127 229 2 0 77 305 49 277 3.30e-161 453
MsG0480022343.01.T01 MTR_1g066390 99.561 228 1 0 1 228 1 228 5.98e-161 451
MsG0480022343.01.T01 MTR_1g066390 99.561 228 1 0 77 304 1 228 5.98e-161 451
MsG0480022343.01.T01 MTR_1g066390 99.561 228 1 0 153 380 1 228 5.98e-161 451
MsG0480022343.01.T01 MTR_4g088485 93.013 229 1 1 153 381 1 214 3.10e-147 416
MsG0480022343.01.T01 MTR_4g088485 92.576 229 2 1 1 229 1 214 3.33e-146 413
MsG0480022343.01.T01 MTR_4g080920 88.596 228 26 0 1 228 1 228 2.00e-141 401
MsG0480022343.01.T01 MTR_4g080920 88.596 228 26 0 77 304 1 228 2.00e-141 401
MsG0480022343.01.T01 MTR_4g080920 88.596 228 26 0 153 380 1 228 2.00e-141 401
MsG0480022343.01.T01 MTR_8g479250 67.949 312 53 6 77 376 1 277 4.11e-120 350
MsG0480022343.01.T01 MTR_8g479250 67.628 312 54 6 1 300 1 277 7.16e-120 349
MsG0480022343.01.T01 MTR_8g479250 64.730 241 49 5 153 381 1 217 4.31e-82 253
MsG0480022343.01.T01 MTR_5g092700 80.921 152 29 0 77 228 1 152 2.49e-81 246
MsG0480022343.01.T01 MTR_5g092700 80.263 152 30 0 1 152 1 152 4.11e-81 245
MsG0480022343.01.T01 MTR_5g092700 80.263 152 30 0 229 380 1 152 4.11e-81 245
MsG0480022343.01.T01 MTR_5g092700 79.605 152 31 0 153 304 1 152 6.92e-81 244
MsG0480022343.01.T01 MTR_4g073580 80.921 152 29 0 77 228 1 152 2.49e-81 246
MsG0480022343.01.T01 MTR_4g073580 80.263 152 30 0 1 152 1 152 4.11e-81 245
MsG0480022343.01.T01 MTR_4g073580 80.263 152 30 0 229 380 1 152 4.11e-81 245
MsG0480022343.01.T01 MTR_4g073580 79.605 152 31 0 153 304 1 152 6.92e-81 244
MsG0480022343.01.T01 MTR_4g073580 67.582 182 29 1 77 228 1 182 9.21e-75 230
MsG0480022343.01.T01 MTR_4g073580 67.033 182 30 1 1 152 1 182 1.50e-74 229
MsG0480022343.01.T01 MTR_4g073580 67.033 182 30 1 229 380 1 182 1.50e-74 229
MsG0480022343.01.T01 MTR_4g073580 66.484 182 31 1 153 304 1 182 2.55e-74 229
MsG0480022343.01.T01 MTR_3g092130 98.701 77 1 0 1 77 1 77 3.44e-47 157
MsG0480022343.01.T01 MTR_3g092130 98.701 77 1 0 77 153 1 77 3.44e-47 157
MsG0480022343.01.T01 MTR_3g092130 98.701 77 1 0 229 305 1 77 3.44e-47 157
MsG0480022343.01.T01 MTR_3g092130 98.701 77 1 0 305 381 1 77 4.79e-47 157
MsG0480022343.01.T01 MTR_3g092130 97.403 77 2 0 153 229 1 77 5.80e-47 157
MsG0480022343.01.T01 MTR_7g105080 98.701 77 1 0 1 77 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_7g105080 98.701 77 1 0 77 153 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_7g105080 98.701 77 1 0 229 305 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_7g105080 98.701 77 1 0 305 381 1 77 7.49e-47 156
MsG0480022343.01.T01 MTR_7g105080 97.403 77 2 0 153 229 1 77 9.28e-47 156
MsG0480022343.01.T01 MTR_3g092130 98.701 77 1 0 1 77 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_3g092130 98.701 77 1 0 77 153 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_3g092130 98.701 77 1 0 229 305 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_3g092130 98.701 77 1 0 305 381 1 77 7.49e-47 156
MsG0480022343.01.T01 MTR_3g092130 97.403 77 2 0 153 229 1 77 9.28e-47 156
MsG0480022343.01.T01 MTR_1g059690 98.701 77 1 0 1 77 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_1g059690 98.701 77 1 0 77 153 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_1g059690 98.701 77 1 0 229 305 1 77 5.56e-47 157
MsG0480022343.01.T01 MTR_1g059690 98.701 77 1 0 305 381 1 77 7.49e-47 156
MsG0480022343.01.T01 MTR_1g059690 97.403 77 2 0 153 229 1 77 9.28e-47 156
MsG0480022343.01.T01 MTR_8g088060 97.436 78 2 0 1 78 1 78 2.00e-46 156
MsG0480022343.01.T01 MTR_8g088060 97.436 78 2 0 77 154 1 78 2.00e-46 156
MsG0480022343.01.T01 MTR_8g088060 97.436 78 2 0 229 306 1 78 2.00e-46 156
MsG0480022343.01.T01 MTR_8g088060 100.000 76 0 0 305 380 1 76 2.32e-46 156
MsG0480022343.01.T01 MTR_8g088060 96.154 78 3 0 153 230 1 78 3.06e-46 155
MsG0480022343.01.T01 MTR_5g033960 97.436 78 2 0 1 78 1 78 2.29e-46 156
MsG0480022343.01.T01 MTR_5g033960 97.436 78 2 0 77 154 1 78 2.29e-46 156
MsG0480022343.01.T01 MTR_5g033960 97.436 78 2 0 229 306 1 78 2.29e-46 156
MsG0480022343.01.T01 MTR_5g033960 100.000 76 0 0 305 380 1 76 2.72e-46 155
MsG0480022343.01.T01 MTR_5g033960 96.154 78 3 0 153 230 1 78 3.51e-46 155
MsG0480022343.01.T01 MTR_1g046640 71.053 76 22 0 1 76 240 315 3.58e-26 107
MsG0480022343.01.T01 MTR_1g046640 71.053 76 22 0 77 152 240 315 3.58e-26 107
MsG0480022343.01.T01 MTR_1g046640 71.053 76 22 0 229 304 240 315 3.58e-26 107
MsG0480022343.01.T01 MTR_1g046640 71.053 76 22 0 305 380 240 315 3.58e-26 107
MsG0480022343.01.T01 MTR_1g046640 69.737 76 23 0 153 228 240 315 6.02e-26 106
MsG0480022343.01.T01 MTR_5g076810 68.831 77 23 1 1 76 194 270 1.92e-25 104
MsG0480022343.01.T01 MTR_5g076810 68.831 77 23 1 77 152 194 270 1.92e-25 104
MsG0480022343.01.T01 MTR_5g076810 68.831 77 23 1 229 304 194 270 1.92e-25 104
MsG0480022343.01.T01 MTR_5g076810 68.831 77 23 1 305 380 194 270 1.92e-25 104
MsG0480022343.01.T01 MTR_5g076810 67.532 77 24 1 153 228 194 270 3.27e-25 103
MsG0480022343.01.T01 MTR_5g076660 63.855 83 30 0 67 149 256 338 2.09e-25 105
MsG0480022343.01.T01 MTR_5g076660 63.855 83 30 0 219 301 256 338 2.09e-25 105
MsG0480022343.01.T01 MTR_5g076660 63.855 83 30 0 295 377 256 338 2.09e-25 105
MsG0480022343.01.T01 MTR_5g076660 62.651 83 31 0 143 225 256 338 3.33e-25 105
MsG0480022343.01.T01 MTR_5g076660 69.863 73 22 0 1 73 266 338 3.87e-25 105
MsG0480022343.01.T01 MTR_5g061310 60.000 75 30 0 1 75 2 76 4.76e-23 92.0
MsG0480022343.01.T01 MTR_5g061310 60.000 75 30 0 77 151 2 76 4.76e-23 92.0
MsG0480022343.01.T01 MTR_5g061310 60.000 75 30 0 229 303 2 76 4.76e-23 92.0
MsG0480022343.01.T01 MTR_5g061310 60.000 75 30 0 305 379 2 76 4.76e-23 92.0
MsG0480022343.01.T01 MTR_5g061310 58.667 75 31 0 153 227 2 76 8.43e-23 91.3
MsG0480022343.01.T01 MTR_5g067400 68.421 76 24 0 1 76 241 316 7.88e-23 98.2
MsG0480022343.01.T01 MTR_5g067400 68.421 76 24 0 77 152 241 316 7.88e-23 98.2
MsG0480022343.01.T01 MTR_5g067400 68.421 76 24 0 229 304 241 316 7.88e-23 98.2
MsG0480022343.01.T01 MTR_5g067400 68.421 76 24 0 305 380 241 316 7.88e-23 98.2
MsG0480022343.01.T01 MTR_5g067400 67.105 76 25 0 153 228 241 316 1.30e-22 97.4
MsG0480022343.01.T01 MTR_5g076370 59.036 83 34 0 67 149 257 339 1.60e-21 94.7
MsG0480022343.01.T01 MTR_5g076370 59.036 83 34 0 219 301 257 339 1.60e-21 94.7
MsG0480022343.01.T01 MTR_5g076370 59.036 83 34 0 295 377 257 339 1.60e-21 94.7
MsG0480022343.01.T01 MTR_5g076370 57.831 83 35 0 143 225 257 339 2.55e-21 94.4
MsG0480022343.01.T01 MTR_5g076370 64.384 73 26 0 1 73 267 339 2.81e-21 94.0
MsG0480022343.01.T01 MTR_5g076505 61.333 75 29 0 1 75 240 314 2.11e-20 91.3
MsG0480022343.01.T01 MTR_5g076505 61.333 75 29 0 77 151 240 314 2.11e-20 91.3
MsG0480022343.01.T01 MTR_5g076505 61.333 75 29 0 229 303 240 314 2.11e-20 91.3
MsG0480022343.01.T01 MTR_5g076505 61.333 75 29 0 305 379 240 314 2.11e-20 91.3
MsG0480022343.01.T01 MTR_5g076505 60.000 75 30 0 153 227 240 314 3.50e-20 90.5
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 1 76 171 246 2.64e-20 89.4
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 77 152 171 246 2.64e-20 89.4
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 229 304 171 246 2.64e-20 89.4
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 305 380 171 246 2.64e-20 89.4
MsG0480022343.01.T01 MTR_1g046650 56.579 76 33 0 153 228 171 246 4.33e-20 89.0
MsG0480022343.01.T01 MTR_2g038430 61.333 75 29 0 1 75 268 342 3.61e-20 90.9
MsG0480022343.01.T01 MTR_2g038430 61.333 75 29 0 77 151 268 342 3.61e-20 90.9
MsG0480022343.01.T01 MTR_2g038430 61.333 75 29 0 229 303 268 342 3.61e-20 90.9
MsG0480022343.01.T01 MTR_2g038430 61.333 75 29 0 305 379 268 342 3.61e-20 90.9
MsG0480022343.01.T01 MTR_2g038430 60.000 75 30 0 153 227 268 342 5.74e-20 90.5
MsG0480022343.01.T01 MTR_5g076720 65.333 75 26 0 1 75 315 389 3.69e-20 91.7
MsG0480022343.01.T01 MTR_5g076720 65.333 75 26 0 77 151 315 389 3.69e-20 91.7
MsG0480022343.01.T01 MTR_5g076720 65.333 75 26 0 229 303 315 389 3.69e-20 91.7
MsG0480022343.01.T01 MTR_5g076720 65.333 75 26 0 305 379 315 389 3.69e-20 91.7
MsG0480022343.01.T01 MTR_5g076720 64.000 75 27 0 153 227 315 389 5.60e-20 90.9
MsG0480022343.01.T01 MTR_5g076740 56.250 80 34 1 303 381 84 163 4.18e-20 86.7
MsG0480022343.01.T01 MTR_5g076740 57.692 78 32 1 75 151 84 161 8.79e-20 85.9
MsG0480022343.01.T01 MTR_5g076740 57.692 78 32 1 227 303 84 161 8.79e-20 85.9
MsG0480022343.01.T01 MTR_5g076740 59.211 76 30 1 1 75 86 161 1.03e-19 85.9
MsG0480022343.01.T01 MTR_5g076740 56.410 78 33 1 151 227 84 161 1.44e-19 85.5
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 1 76 240 315 5.27e-20 90.1
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 77 152 240 315 5.27e-20 90.1
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 229 304 240 315 5.27e-20 90.1
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 305 380 240 315 5.27e-20 90.1
MsG0480022343.01.T01 MTR_1g046650 56.579 76 33 0 153 228 240 315 8.73e-20 89.4
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 1 76 240 315 7.47e-20 89.7
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 77 152 240 315 7.47e-20 89.7
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 229 304 240 315 7.47e-20 89.7
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 305 380 240 315 7.47e-20 89.7
MsG0480022343.01.T01 MTR_1g046650 56.579 76 33 0 153 228 240 315 1.20e-19 89.0
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 1 76 271 346 1.07e-19 89.7
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 77 152 271 346 1.07e-19 89.7
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 229 304 271 346 1.07e-19 89.7
MsG0480022343.01.T01 MTR_1g046650 57.895 76 32 0 305 380 271 346 1.07e-19 89.7
MsG0480022343.01.T01 MTR_1g046650 56.579 76 33 0 153 228 271 346 1.72e-19 89.0
MsG0480022343.01.T01 MTR_2g038420 60.000 75 30 0 1 75 260 334 1.65e-19 89.0
MsG0480022343.01.T01 MTR_2g038420 60.000 75 30 0 77 151 260 334 1.65e-19 89.0
MsG0480022343.01.T01 MTR_2g038420 60.000 75 30 0 229 303 260 334 1.65e-19 89.0
MsG0480022343.01.T01 MTR_2g038420 60.000 75 30 0 305 379 260 334 1.65e-19 89.0
MsG0480022343.01.T01 MTR_2g038420 58.667 75 31 0 153 227 260 334 2.66e-19 88.2
MsG0480022343.01.T01 MTR_4g080783 53.409 88 11 1 44 101 7 94 2.10e-19 82.8
MsG0480022343.01.T01 MTR_4g080783 53.409 88 11 1 196 253 7 94 2.10e-19 82.8
MsG0480022343.01.T01 MTR_4g080783 53.409 88 11 1 272 329 7 94 2.10e-19 82.8
MsG0480022343.01.T01 MTR_4g080783 52.273 88 12 1 120 177 7 94 3.37e-19 82.0
MsG0480022343.01.T01 MTR_7g094390 55.294 85 38 0 143 227 392 476 8.73e-19 88.2
MsG0480022343.01.T01 MTR_7g094390 54.118 85 39 0 67 151 392 476 1.40e-18 87.4
MsG0480022343.01.T01 MTR_7g094390 54.118 85 39 0 219 303 392 476 1.40e-18 87.4
MsG0480022343.01.T01 MTR_7g094390 54.118 85 39 0 295 379 392 476 1.40e-18 87.4
MsG0480022343.01.T01 MTR_7g094390 58.667 75 31 0 1 75 402 476 2.06e-18 87.0
MsG0480022343.01.T01 MTR_5g076520 56.410 78 33 1 305 381 244 321 1.16e-17 83.6
MsG0480022343.01.T01 MTR_5g076520 57.333 75 31 1 1 74 244 318 2.17e-17 82.8
MsG0480022343.01.T01 MTR_5g076520 57.333 75 31 1 77 150 244 318 2.17e-17 82.8
MsG0480022343.01.T01 MTR_5g076520 57.333 75 31 1 229 302 244 318 2.17e-17 82.8
MsG0480022343.01.T01 MTR_5g076520 56.000 75 32 1 153 226 244 318 3.49e-17 82.0
MsG0480022343.01.T01 MTR_7g024290 60.526 76 29 1 1 75 241 316 1.34e-16 80.1
MsG0480022343.01.T01 MTR_7g024290 60.526 76 29 1 77 151 241 316 1.34e-16 80.1
MsG0480022343.01.T01 MTR_7g024290 60.526 76 29 1 229 303 241 316 1.34e-16 80.1
MsG0480022343.01.T01 MTR_7g024290 60.526 76 29 1 305 379 241 316 1.34e-16 80.1
MsG0480022343.01.T01 MTR_7g024290 59.211 76 30 1 153 227 241 316 2.17e-16 79.7
MsG0480022343.01.T01 MTR_5g061290 53.333 75 35 0 1 75 252 326 7.03e-16 78.2
MsG0480022343.01.T01 MTR_5g061290 53.333 75 35 0 77 151 252 326 7.03e-16 78.2
MsG0480022343.01.T01 MTR_5g061290 53.333 75 35 0 229 303 252 326 7.03e-16 78.2
MsG0480022343.01.T01 MTR_5g061290 53.333 75 35 0 305 379 252 326 7.03e-16 78.2
MsG0480022343.01.T01 MTR_5g061290 52.000 75 36 0 153 227 252 326 1.14e-15 77.8
MsG0480022343.01.T01 MTR_4g009980 55.224 67 30 0 9 75 4 70 8.23e-16 72.0
MsG0480022343.01.T01 MTR_4g009980 55.224 67 30 0 85 151 4 70 8.23e-16 72.0
MsG0480022343.01.T01 MTR_4g009980 55.224 67 30 0 237 303 4 70 8.23e-16 72.0
MsG0480022343.01.T01 MTR_4g009980 55.224 67 30 0 313 379 4 70 8.23e-16 72.0
MsG0480022343.01.T01 MTR_4g009980 53.731 67 31 0 161 227 4 70 1.29e-15 71.6
MsG0480022343.01.T01 MTR_8g027610 31.953 169 103 6 217 378 26 189 1.66e-15 78.6
MsG0480022343.01.T01 MTR_8g027610 31.361 169 104 6 65 226 26 189 2.41e-15 77.8
MsG0480022343.01.T01 MTR_8g027610 31.361 169 104 6 141 302 26 189 2.41e-15 77.8
MsG0480022343.01.T01 MTR_8g027610 33.974 156 91 6 3 150 38 189 5.33e-15 77.0
MsG0480022343.01.T01 MTR_3g091400 33.121 157 101 4 148 301 22 177 3.09e-15 77.8
MsG0480022343.01.T01 MTR_3g091400 32.484 157 102 4 224 377 22 177 4.94e-15 77.0
MsG0480022343.01.T01 MTR_3g091400 31.847 157 103 4 72 225 22 177 7.28e-15 76.6
MsG0480022343.01.T01 MTR_3g091400 33.562 146 94 3 7 149 32 177 7.35e-15 76.6
MsG0480022343.01.T01 MTR_2g088760 26.522 230 144 5 15 221 14 241 7.89e-15 73.9
MsG0480022343.01.T01 MTR_2g088760 26.087 230 145 5 167 373 14 241 1.39e-14 73.2
MsG0480022343.01.T01 MTR_2g088760 31.724 145 86 4 243 376 14 156 7.30e-11 62.4
MsG0480022343.01.T01 MTR_7g117395 32.278 158 100 5 1 152 37 193 6.75e-14 73.6
MsG0480022343.01.T01 MTR_7g117395 32.278 158 100 5 229 380 37 193 6.75e-14 73.6
MsG0480022343.01.T01 MTR_7g117395 31.646 158 101 5 77 228 37 193 9.85e-14 73.2
MsG0480022343.01.T01 MTR_7g117395 31.646 158 101 5 153 304 37 193 9.85e-14 73.2
MsG0480022343.01.T01 MTR_5g076760 58.621 58 24 0 10 67 4 61 1.18e-13 66.2
MsG0480022343.01.T01 MTR_5g076760 58.621 58 24 0 86 143 4 61 1.18e-13 66.2
MsG0480022343.01.T01 MTR_5g076760 58.621 58 24 0 238 295 4 61 1.18e-13 66.2
MsG0480022343.01.T01 MTR_5g076760 58.621 58 24 0 314 371 4 61 1.18e-13 66.2
MsG0480022343.01.T01 MTR_5g076760 56.897 58 25 0 162 219 4 61 1.95e-13 65.9
MsG0480022343.01.T01 MTR_5g076780 56.452 62 27 0 13 74 2 63 1.49e-13 65.5
MsG0480022343.01.T01 MTR_5g076780 56.452 62 27 0 89 150 2 63 1.49e-13 65.5
MsG0480022343.01.T01 MTR_5g076780 56.452 62 27 0 241 302 2 63 1.49e-13 65.5
MsG0480022343.01.T01 MTR_5g076780 56.452 62 27 0 317 378 2 63 1.49e-13 65.5
MsG0480022343.01.T01 MTR_5g076780 54.839 62 28 0 165 226 2 63 2.35e-13 65.1
MsG0480022343.01.T01 MTR_5g076350 50.000 74 36 1 1 73 8 81 9.95e-13 63.9
MsG0480022343.01.T01 MTR_5g076350 50.000 74 36 1 77 149 8 81 9.95e-13 63.9
MsG0480022343.01.T01 MTR_5g076350 50.000 74 36 1 229 301 8 81 9.95e-13 63.9
MsG0480022343.01.T01 MTR_5g076350 50.000 74 36 1 305 377 8 81 9.95e-13 63.9
MsG0480022343.01.T01 MTR_5g076350 48.649 74 37 1 153 225 8 81 1.47e-12 63.2
MsG0480022343.01.T01 MTR_5g076340 52.000 75 34 2 1 73 9 83 5.19e-12 62.0
MsG0480022343.01.T01 MTR_5g076340 52.000 75 34 2 77 149 9 83 5.19e-12 62.0
MsG0480022343.01.T01 MTR_5g076340 52.000 75 34 2 229 301 9 83 5.19e-12 62.0
MsG0480022343.01.T01 MTR_5g076340 52.000 75 34 2 305 377 9 83 5.19e-12 62.0
MsG0480022343.01.T01 MTR_5g076340 50.667 75 35 2 153 225 9 83 7.76e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022343.01.T01 AT4G05320 99.738 381 1 0 1 381 77 457 0.0 753
MsG0480022343.01.T01 AT4G05320 99.475 381 2 0 1 381 1 381 0.0 751
MsG0480022343.01.T01 AT4G05320 99.738 381 1 0 1 381 77 457 0.0 753
MsG0480022343.01.T01 AT4G05320 99.475 381 2 0 1 381 1 381 0.0 751
MsG0480022343.01.T01 AT4G05320 99.738 381 1 0 1 381 1 381 0.0 753
MsG0480022343.01.T01 AT4G05320 99.738 381 1 0 1 381 1 381 0.0 753
MsG0480022343.01.T01 AT4G05320 99.738 381 1 0 1 381 1 381 0.0 753
MsG0480022343.01.T01 AT5G20620 99.737 380 1 0 1 380 1 380 0.0 750
MsG0480022343.01.T01 AT4G05320 99.672 305 1 0 77 381 1 305 0.0 604
MsG0480022343.01.T01 AT4G05320 99.344 305 2 0 1 305 1 305 0.0 602
MsG0480022343.01.T01 AT4G05320 99.672 305 1 0 77 381 1 305 0.0 604
MsG0480022343.01.T01 AT4G05320 99.344 305 2 0 1 305 1 305 0.0 602
MsG0480022343.01.T01 AT4G02890 99.672 305 1 0 77 381 1 305 0.0 604
MsG0480022343.01.T01 AT4G02890 99.344 305 2 0 1 305 1 305 0.0 602
MsG0480022343.01.T01 AT4G02890 99.672 305 1 0 77 381 1 305 0.0 604
MsG0480022343.01.T01 AT4G02890 99.344 305 2 0 1 305 1 305 0.0 602
MsG0480022343.01.T01 AT5G03240 99.671 304 1 0 1 304 1 304 0.0 601
MsG0480022343.01.T01 AT5G03240 99.671 304 1 0 77 380 1 304 0.0 601
MsG0480022343.01.T01 AT5G03240 99.671 304 1 0 1 304 1 304 0.0 601
MsG0480022343.01.T01 AT5G03240 99.671 304 1 0 77 380 1 304 0.0 601
MsG0480022343.01.T01 AT5G03240 99.671 304 1 0 1 304 1 304 0.0 601
MsG0480022343.01.T01 AT5G03240 99.671 304 1 0 77 380 1 304 0.0 601
MsG0480022343.01.T01 AT5G20620 99.671 304 1 0 1 304 1 304 0.0 601
MsG0480022343.01.T01 AT5G20620 99.671 304 1 0 77 380 1 304 0.0 601
MsG0480022343.01.T01 AT1G65350 93.396 318 6 2 1 304 1 317 0.0 570
MsG0480022343.01.T01 AT1G65350 93.396 318 6 2 77 380 1 317 0.0 570
MsG0480022343.01.T01 AT3G09790 77.892 389 72 4 1 375 3 391 0.0 566
MsG0480022343.01.T01 AT3G09790 74.365 394 83 5 1 380 79 468 0.0 540
MsG0480022343.01.T01 AT3G09790 71.684 392 93 4 1 378 238 625 7.53e-179 511
MsG0480022343.01.T01 AT3G09790 69.077 401 99 6 1 380 155 551 6.87e-174 499
MsG0480022343.01.T01 AT3G09790 89.474 152 16 0 229 380 3 154 1.48e-83 267
MsG0480022343.01.T01 AT3G09790 77.892 389 72 4 1 375 3 391 0.0 566
MsG0480022343.01.T01 AT3G09790 74.365 394 83 5 1 380 79 468 0.0 540
MsG0480022343.01.T01 AT3G09790 71.684 392 93 4 1 378 238 625 7.53e-179 511
MsG0480022343.01.T01 AT3G09790 69.077 401 99 6 1 380 155 551 6.87e-174 499
MsG0480022343.01.T01 AT3G09790 89.474 152 16 0 229 380 3 154 1.48e-83 267
MsG0480022343.01.T01 AT5G37640 89.869 306 30 1 76 380 2 307 0.0 538
MsG0480022343.01.T01 AT5G37640 90.164 305 29 1 1 304 3 307 0.0 538
MsG0480022343.01.T01 AT4G05050 99.563 229 1 0 153 381 1 229 2.39e-162 454
MsG0480022343.01.T01 AT4G05050 99.127 229 2 0 1 229 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G05050 99.127 229 2 0 77 305 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G05050 99.563 229 1 0 153 381 1 229 2.39e-162 454
MsG0480022343.01.T01 AT4G05050 99.127 229 2 0 1 229 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G05050 99.127 229 2 0 77 305 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G05050 99.563 229 1 0 153 381 1 229 2.39e-162 454
MsG0480022343.01.T01 AT4G05050 99.127 229 2 0 1 229 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G05050 99.127 229 2 0 77 305 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G02890 99.563 229 1 0 153 381 1 229 2.39e-162 454
MsG0480022343.01.T01 AT4G02890 99.127 229 2 0 1 229 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G02890 99.127 229 2 0 77 305 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G02890 99.563 229 1 0 153 381 1 229 2.39e-162 454
MsG0480022343.01.T01 AT4G02890 99.127 229 2 0 1 229 1 229 2.63e-161 452
MsG0480022343.01.T01 AT4G02890 99.127 229 2 0 77 305 1 229 2.63e-161 452
MsG0480022343.01.T01 AT1G55060 93.860 228 14 0 1 228 1 228 6.53e-152 428
MsG0480022343.01.T01 AT1G55060 93.860 228 14 0 77 304 1 228 6.53e-152 428
MsG0480022343.01.T01 AT1G55060 93.860 228 14 0 153 380 1 228 6.53e-152 428
MsG0480022343.01.T01 AT4G05050 100.000 153 0 0 229 381 1 153 8.41e-105 305
MsG0480022343.01.T01 AT4G05050 99.346 153 1 0 1 153 1 153 8.87e-104 303
MsG0480022343.01.T01 AT4G05050 98.693 153 2 0 77 229 1 153 1.50e-103 302
MsG0480022343.01.T01 AT4G05050 98.693 153 2 0 153 305 1 153 1.50e-103 302
MsG0480022343.01.T01 AT4G05320 100.000 153 0 0 229 381 1 153 8.41e-105 305
MsG0480022343.01.T01 AT4G05320 99.346 153 1 0 1 153 1 153 8.87e-104 303
MsG0480022343.01.T01 AT4G05320 98.693 153 2 0 77 229 1 153 1.50e-103 302
MsG0480022343.01.T01 AT4G05320 98.693 153 2 0 153 305 1 153 1.50e-103 302
MsG0480022343.01.T01 AT1G31340 81.046 153 29 0 229 381 1 153 1.05e-82 249
MsG0480022343.01.T01 AT1G31340 79.487 156 32 0 77 232 1 156 6.66e-82 247
MsG0480022343.01.T01 AT1G31340 78.846 156 33 0 1 156 1 156 1.09e-81 247
MsG0480022343.01.T01 AT1G31340 78.205 156 34 0 153 308 1 156 1.85e-81 246
MsG0480022343.01.T01 AT2G35635 80.392 153 30 0 77 229 1 153 4.26e-81 245
MsG0480022343.01.T01 AT2G35635 79.739 153 31 0 1 153 1 153 6.94e-81 244
MsG0480022343.01.T01 AT2G35635 79.739 153 31 0 229 381 1 153 9.83e-81 244
MsG0480022343.01.T01 AT2G35635 79.085 153 32 0 153 305 1 153 1.18e-80 244
MsG0480022343.01.T01 AT3G52590 98.701 77 1 0 1 77 1 77 6.07e-47 156
MsG0480022343.01.T01 AT3G52590 98.701 77 1 0 77 153 1 77 6.07e-47 156
MsG0480022343.01.T01 AT3G52590 98.701 77 1 0 229 305 1 77 6.07e-47 156
MsG0480022343.01.T01 AT3G52590 98.701 77 1 0 305 381 1 77 7.52e-47 156
MsG0480022343.01.T01 AT3G52590 97.403 77 2 0 153 229 1 77 1.04e-46 156
MsG0480022343.01.T01 AT2G36170 98.701 77 1 0 1 77 1 77 6.07e-47 156
MsG0480022343.01.T01 AT2G36170 98.701 77 1 0 77 153 1 77 6.07e-47 156
MsG0480022343.01.T01 AT2G36170 98.701 77 1 0 229 305 1 77 6.07e-47 156
MsG0480022343.01.T01 AT2G36170 98.701 77 1 0 305 381 1 77 7.52e-47 156
MsG0480022343.01.T01 AT2G36170 97.403 77 2 0 153 229 1 77 1.04e-46 156
MsG0480022343.01.T01 AT3G62250 97.436 78 2 0 1 78 1 78 2.15e-46 156
MsG0480022343.01.T01 AT3G62250 97.436 78 2 0 77 154 1 78 2.15e-46 156
MsG0480022343.01.T01 AT3G62250 97.436 78 2 0 229 306 1 78 2.15e-46 156
MsG0480022343.01.T01 AT3G62250 100.000 76 0 0 305 380 1 76 2.56e-46 156
MsG0480022343.01.T01 AT3G62250 96.154 78 3 0 153 230 1 78 3.37e-46 155
MsG0480022343.01.T01 AT2G47110 97.436 78 2 0 1 78 1 78 2.15e-46 156
MsG0480022343.01.T01 AT2G47110 97.436 78 2 0 77 154 1 78 2.15e-46 156
MsG0480022343.01.T01 AT2G47110 97.436 78 2 0 229 306 1 78 2.15e-46 156
MsG0480022343.01.T01 AT2G47110 100.000 76 0 0 305 380 1 76 2.50e-46 156
MsG0480022343.01.T01 AT2G47110 96.154 78 3 0 153 230 1 78 3.30e-46 155
MsG0480022343.01.T01 AT2G47110 97.436 78 2 0 1 78 1 78 2.15e-46 156
MsG0480022343.01.T01 AT2G47110 97.436 78 2 0 77 154 1 78 2.15e-46 156
MsG0480022343.01.T01 AT2G47110 97.436 78 2 0 229 306 1 78 2.15e-46 156
MsG0480022343.01.T01 AT2G47110 100.000 76 0 0 305 380 1 76 2.50e-46 156
MsG0480022343.01.T01 AT2G47110 96.154 78 3 0 153 230 1 78 3.30e-46 155
MsG0480022343.01.T01 AT1G23410 100.000 76 0 0 1 76 1 76 4.70e-46 155
MsG0480022343.01.T01 AT1G23410 100.000 76 0 0 77 152 1 76 4.70e-46 155
MsG0480022343.01.T01 AT1G23410 100.000 76 0 0 229 304 1 76 4.70e-46 155
MsG0480022343.01.T01 AT1G23410 100.000 76 0 0 305 380 1 76 4.70e-46 155
MsG0480022343.01.T01 AT1G23410 98.684 76 1 0 153 228 1 76 7.12e-46 155
MsG0480022343.01.T01 AT1G53930 49.091 165 54 7 8 149 1 158 4.57e-33 121
MsG0480022343.01.T01 AT1G53930 49.091 165 54 7 236 377 1 158 4.57e-33 121
MsG0480022343.01.T01 AT1G53930 48.485 165 55 7 84 225 1 158 7.95e-33 120
MsG0480022343.01.T01 AT1G53930 48.485 165 55 7 160 301 1 158 7.95e-33 120
MsG0480022343.01.T01 AT1G53930 75.342 73 18 0 1 73 86 158 3.14e-30 114
MsG0480022343.01.T01 AT1G53950 41.463 164 55 3 223 379 14 143 6.15e-26 102
MsG0480022343.01.T01 AT1G53950 40.854 164 56 3 71 227 14 143 1.02e-25 101
MsG0480022343.01.T01 AT1G53950 40.854 164 56 3 147 303 14 143 1.02e-25 101
MsG0480022343.01.T01 AT1G53950 43.038 158 49 3 1 151 20 143 1.14e-25 101
MsG0480022343.01.T01 AT1G11980 55.844 77 34 0 153 229 1 77 2.49e-22 90.1
MsG0480022343.01.T01 AT1G11980 54.545 77 35 0 1 77 1 77 3.98e-22 89.7
MsG0480022343.01.T01 AT1G11980 54.545 77 35 0 77 153 1 77 3.98e-22 89.7
MsG0480022343.01.T01 AT1G11980 54.545 77 35 0 229 305 1 77 3.98e-22 89.7
MsG0480022343.01.T01 AT1G11980 54.545 77 35 0 305 381 1 77 4.23e-22 89.7
MsG0480022343.01.T01 AT2G46500 35.862 145 90 2 7 148 40 184 1.02e-18 87.4
MsG0480022343.01.T01 AT2G46500 35.862 145 90 2 235 376 40 184 1.02e-18 87.4
MsG0480022343.01.T01 AT2G46500 35.172 145 91 2 159 300 40 184 1.47e-18 87.0
MsG0480022343.01.T01 AT2G46500 35.862 145 90 2 7 148 40 184 1.41e-18 87.8
MsG0480022343.01.T01 AT2G46500 35.862 145 90 2 235 376 40 184 1.41e-18 87.8
MsG0480022343.01.T01 AT2G46500 35.172 145 91 2 159 300 40 184 2.01e-18 87.4
MsG0480022343.01.T01 AT2G46500 35.862 145 90 2 7 148 40 184 1.41e-18 87.8
MsG0480022343.01.T01 AT2G46500 35.862 145 90 2 235 376 40 184 1.41e-18 87.8
MsG0480022343.01.T01 AT2G46500 35.172 145 91 2 159 300 40 184 2.01e-18 87.4
MsG0480022343.01.T01 AT1G53945 38.356 146 53 3 1 143 1 112 5.01e-17 77.0
MsG0480022343.01.T01 AT1G53945 38.356 146 53 3 229 371 1 112 5.01e-17 77.0
MsG0480022343.01.T01 AT1G53945 37.671 146 54 3 77 219 1 112 8.25e-17 76.6
MsG0480022343.01.T01 AT1G53945 37.671 146 54 3 153 295 1 112 8.25e-17 76.6
MsG0480022343.01.T01 AT5G24240 33.793 145 91 3 7 147 38 181 3.26e-13 71.6
MsG0480022343.01.T01 AT5G24240 33.793 145 91 3 235 375 38 181 3.26e-13 71.6
MsG0480022343.01.T01 AT5G24240 33.103 145 92 3 83 223 38 181 4.80e-13 70.9
MsG0480022343.01.T01 AT5G24240 33.103 145 92 3 159 299 38 181 4.80e-13 70.9
MsG0480022343.01.T01 AT5G24240 33.793 145 91 3 7 147 38 181 3.26e-13 71.6
MsG0480022343.01.T01 AT5G24240 33.793 145 91 3 235 375 38 181 3.26e-13 71.6
MsG0480022343.01.T01 AT5G24240 33.103 145 92 3 83 223 38 181 4.80e-13 70.9
MsG0480022343.01.T01 AT5G24240 33.103 145 92 3 159 299 38 181 4.80e-13 70.9

Find 129 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGAAGAGTCGACTCTTTC+TGG 0.126791 4:-71435748 None:intergenic
GGACGATAATTGCGTCTTTC+AGG 0.173508 4:+71436724 MsG0480022343.01.T01:three_prime_UTR
CTCTAAGGTGATGGTCTTTC+CGG 0.200970 4:-71436275 None:intergenic
CCAGGATAATAGAAAACTTA+TGG 0.237922 4:-71436703 None:intergenic
AAAATCAACCTTTGCTGGTC+TGG 0.264626 4:-71435905 None:intergenic
ACCCTCCTTGTCTTGTATCT+TGG 0.285153 4:-71435876 None:intergenic
GCCCTCCTTGTCCTGAATCT+TGG 0.293027 4:-71435648 None:intergenic
GTCTGAACTTTCTACCTCTA+AGG 0.297115 4:-71436290 None:intergenic
AATGGAGGGTGGACTCCTTT+TGG 0.298494 4:-71435520 None:intergenic
GTTGAGGTTCCACAGGTCTT+TGG 0.316888 4:+71436517 MsG0480022343.01.T01:three_prime_UTR
GTGGGATTCCTTCCTTGTCC+TGG 0.333455 4:-71436339 None:intergenic
ATTACTTCTGCCATTTGAAT+TGG 0.334822 4:+71436676 MsG0480022343.01.T01:three_prime_UTR
CAGCAGAGGTTGATCTTTGC+TGG 0.336237 4:+71436367 MsG0480022343.01.T01:CDS
CAGCAGAGGTTGATCTTTGC+TGG 0.342464 4:+71436139 MsG0480022343.01.T01:CDS
TTCGAGAGTGATGGTCTTGC+CGG 0.343790 4:-71435363 None:intergenic
TTCATCTTGTTCTACGTTTG+AGG 0.344625 4:+71435993 MsG0480022343.01.T01:CDS
ATGATACCTTGAATTGGAAT+TGG 0.350207 4:-71434428 None:intergenic
CAGCAGAGGCTCATCTTTGC+TGG 0.364047 4:+71435683 MsG0480022343.01.T01:CDS
AAATCAACCTTTGCTGGTCT+GGG 0.365399 4:-71435904 None:intergenic
AAGATGAGCCTCTGCTGATC+TGG 0.367317 4:-71435677 None:intergenic
AAGATCAACCTCTGCTGATC+AGG 0.373623 4:-71436133 None:intergenic
AAGATCAACCTCTGCTGATC+TGG 0.386006 4:-71436361 None:intergenic
TAATGTCAAAGCCAAGATTC+AGG 0.391089 4:+71435637 MsG0480022343.01.T01:CDS
TCATCTTGTTCTACGTTTGA+GGG 0.393721 4:+71435994 MsG0480022343.01.T01:CDS
TCAATTCCAATTCCAATTCA+AGG 0.395304 4:+71434422 MsG0480022343.01.T01:five_prime_UTR
CACCTTGTCTTGCGTCTTCG+TGG 0.401932 4:+71435767 MsG0480022343.01.T01:CDS
CTTGGCTTTGACATTATCAA+TGG 0.411347 4:-71435630 None:intergenic
AAAATGAGACGCTGCTGGTC+AGG 0.413921 4:-71435449 None:intergenic
CAGGATAATAGAAAACTTAT+GGG 0.417561 4:-71436702 None:intergenic
ATCTTCGTCAAGACTCTTAC+CGG 0.419828 4:+71435344 MsG0480022343.01.T01:CDS
ATCTTTGTGAAGACTTTGAC+AGG 0.426787 4:+71436028 MsG0480022343.01.T01:CDS
TCACCTTGTCCTTCGTCTGA+GGG 0.429582 4:+71436222 MsG0480022343.01.T01:CDS
GATCTTTGCTGGGAAGCAAT+TGG 0.437250 4:+71436378 MsG0480022343.01.T01:CDS
CACGGAGACGGAGCACCAAA+TGG 0.444484 4:-71435538 None:intergenic
GCTGGCAAGCAGCTGGAGGA+CGG 0.444847 4:+71435473 MsG0480022343.01.T01:CDS
AAAGGAGTCCACCCTCCATT+TGG 0.449144 4:+71435523 MsG0480022343.01.T01:CDS
CGGAAAGACCATCACCTTAG+AGG 0.449778 4:+71436276 MsG0480022343.01.T01:CDS
GAGTAGATGATACCTTGAAT+TGG 0.452764 4:-71434434 None:intergenic
CACGGGCAAAACAATTACTT+TGG 0.452973 4:+71435817 MsG0480022343.01.T01:CDS
TTCACCTTGTCCTTCGTCTG+AGG 0.473917 4:+71436221 MsG0480022343.01.T01:CDS
CAACAAACTCACCGTTCCCT+TGG 0.478515 4:+71434343 MsG0480022343.01.T01:five_prime_UTR
CTGGCAAGCAGCTGGAGGAC+GGG 0.481276 4:+71435474 MsG0480022343.01.T01:CDS
GCTGGAAAGCAGCTTGAAGA+TGG 0.484886 4:+71436157 MsG0480022343.01.T01:CDS
AGATACCATCGATAATGTTA+AGG 0.493794 4:+71436081 MsG0480022343.01.T01:CDS
AGGATGTGTTGAGGTTCCAC+AGG 0.499767 4:+71436510 MsG0480022343.01.T01:three_prime_UTR
GCTGGAAAGCAGCTCGAAGA+TGG 0.501802 4:+71435701 MsG0480022343.01.T01:CDS
ATCTTCGTGAAGACTCTCAC+TGG 0.505100 4:+71435572 MsG0480022343.01.T01:CDS
ATCAACCTCTGCTGATCTGG+TGG 0.507286 4:-71436358 None:intergenic
ACGGTGTTGTGTGCTAGGTT+TGG 0.511144 4:-71434394 None:intergenic
GCTGGAAAGCAGCTTGAAGA+TGG 0.511219 4:+71435929 MsG0480022343.01.T01:CDS
TTATGGGTAACCAATTCAAA+TGG 0.512917 4:-71436686 None:intergenic
ATCAACCTCTGCTGATCAGG+TGG 0.514894 4:-71436130 None:intergenic
TACTTTGGAGATAGAGAGCT+CGG 0.519556 4:+71435832 MsG0480022343.01.T01:CDS
ATCAACCTTTGCTGGTCTGG+GGG 0.520033 4:-71435902 None:intergenic
GAAAGCAGCTTGAAGATGGC+AGG 0.525368 4:+71435933 MsG0480022343.01.T01:CDS
TTTGGATGTTATAATCTGCA+AGG 0.527053 4:-71435502 None:intergenic
GCTTGAAGATGGTCGCACTT+TGG 0.529328 4:+71436168 MsG0480022343.01.T01:CDS
AGCAGAGGTTGATCTTTGCT+GGG 0.529946 4:+71436368 MsG0480022343.01.T01:CDS
AGATACCATAGACAATGTTA+AGG 0.537394 4:+71435397 MsG0480022343.01.T01:CDS
GCTTGAAGATGGCAGGACCT+TGG 0.537424 4:+71435940 MsG0480022343.01.T01:CDS
TGCAGATTATAACATCCAAA+AGG 0.538373 4:+71435505 MsG0480022343.01.T01:CDS
TCAAACGTAGAACAAGATGA+AGG 0.540718 4:-71435991 None:intergenic
GACAGGAAAGACCATTACAT+TGG 0.541520 4:+71436045 MsG0480022343.01.T01:CDS
AACGAACGGTGTTGTGTGCT+AGG 0.543363 4:-71434399 None:intergenic
TGGTGCTCCGTCTCCGTGGT+GGG 0.544610 4:+71435543 MsG0480022343.01.T01:CDS
ACATTTATTTAGTAAAATGA+CGG 0.545517 4:-71436619 None:intergenic
ATGAGACGCTGCTGGTCAGG+TGG 0.548364 4:-71435446 None:intergenic
CTTGTTCTACGTTTGAGGGG+AGG 0.553315 4:+71435998 MsG0480022343.01.T01:CDS
CATCTTGTTCTACGTTTGAG+GGG 0.559917 4:+71435995 MsG0480022343.01.T01:CDS
AATCAACCTTTGCTGGTCTG+GGG 0.560414 4:-71435903 None:intergenic
AAAGACCATTACATTGGAGG+TGG 0.561866 4:+71436051 MsG0480022343.01.T01:CDS
TTGGATGTTATAATCTGCAA+GGG 0.562824 4:-71435501 None:intergenic
GAAAGACGCAATTATCGTCC+AGG 0.564028 4:-71436721 None:intergenic
ACTTTCCACCTCCAATGTAA+TGG 0.564770 4:-71436056 None:intergenic
TTGGTGCTCCGTCTCCGTGG+TGG 0.565817 4:+71435542 MsG0480022343.01.T01:CDS
TATCAGAGCTCTCCACCTCA+AGG 0.571250 4:-71435607 None:intergenic
ACTCTCAACTTCGAGAGTGA+TGG 0.574244 4:-71435372 None:intergenic
GGAAGCAATTGGAGGATGGA+AGG 0.574300 4:+71436389 MsG0480022343.01.T01:CDS
GCTGGGAAGCAATTGGAGGA+TGG 0.578365 4:+71436385 MsG0480022343.01.T01:CDS
TTTCGGTTCTCTGCAACCAA+GGG 0.580640 4:-71434359 None:intergenic
CAAAGCCAAGATTCAGGACA+AGG 0.580939 4:+71435643 MsG0480022343.01.T01:CDS
ACTTTCTACCTCTAAGGTGA+TGG 0.582751 4:-71436284 None:intergenic
CTTTGCTGGGAAGCAATTGG+AGG 0.583614 4:+71436381 MsG0480022343.01.T01:CDS
GCCAAGATTCAGGACAAGGA+GGG 0.584838 4:+71435647 MsG0480022343.01.T01:CDS
TTTGCATCCCACCACGGAGA+CGG 0.585980 4:-71435550 None:intergenic
ATGAGCCTCTGCTGATCTGG+AGG 0.587540 4:-71435674 None:intergenic
TCTGAATGTTGTAGTCAGCA+AGG 0.587752 4:-71436414 None:intergenic
GTTCTCTGCAACCAAGGGAA+CGG 0.591817 4:-71434354 None:intergenic
AGGAAAGACCATTACATTGG+AGG 0.594005 4:+71436048 MsG0480022343.01.T01:CDS
CACCTTGTCCTTCGTCTGAG+GGG 0.595136 4:+71436223 MsG0480022343.01.T01:CDS
TCAGACGAAGGACAAGGTGA+AGG 0.598150 4:-71436219 None:intergenic
GCATACCTCCCCTCAGACGA+AGG 0.600064 4:-71436231 None:intergenic
TGAGACGCTGCTGGTCAGGT+GGG 0.600727 4:-71435445 None:intergenic
GGCTGATTATAACATTCAGA+AGG 0.601390 4:+71435961 MsG0480022343.01.T01:CDS
CTGAATGTTGTAGTCAGCAA+GGG 0.603128 4:-71436413 None:intergenic
ATCAGAGCTCTCCACCTCAA+GGG 0.607192 4:-71435606 None:intergenic
CTTGTCTTGCGTCTTCGTGG+TGG 0.607639 4:+71435770 MsG0480022343.01.T01:CDS
TCAACCTCTGCTGATCTGGT+GGG 0.608097 4:-71436357 None:intergenic
AGACACAATTGATAATGTGA+AGG 0.613789 4:+71436309 MsG0480022343.01.T01:CDS
TGGATAATTTGCTATCGTTG+TGG 0.615110 4:+71436641 MsG0480022343.01.T01:three_prime_UTR
GATAATTGCGTCTTTCAGGT+AGG 0.615576 4:+71436728 MsG0480022343.01.T01:three_prime_UTR
ACTTGGTCAATGGTCTGTAA+CGG 0.616994 4:+71436556 MsG0480022343.01.T01:three_prime_UTR
CTGAATGTTATAATCAGCCA+AGG 0.618098 4:-71435957 None:intergenic
GGAATTGGAATTGAAACGAA+CGG 0.618451 4:-71434413 None:intergenic
CTTGTCCTTCGTCTGAGGGG+AGG 0.620614 4:+71436226 MsG0480022343.01.T01:CDS
AAAGACAATCACCCTTGAGG+TGG 0.620786 4:+71435595 MsG0480022343.01.T01:CDS
GAGACGGAGCACCAAATGGA+GGG 0.627403 4:-71435534 None:intergenic
CAGACGAAGGACAAGGTGAA+GGG 0.628911 4:-71436218 None:intergenic
TCAACCTCTGCTGATCAGGT+GGG 0.629318 4:-71436129 None:intergenic
ACGAAGGACAAGGTGAAGGG+TGG 0.635697 4:-71436215 None:intergenic
CTCCCCTCAGACGAAGGACA+AGG 0.635855 4:-71436225 None:intergenic
GGAGACGGAGCACCAAATGG+AGG 0.636733 4:-71435535 None:intergenic
CACCACGAAGACGTAAAACA+AGG 0.637833 4:-71436453 None:intergenic
TCAACCTTTGCTGGTCTGGG+GGG 0.638948 4:-71435901 None:intergenic
CATTTGGTGCTCCGTCTCCG+TGG 0.639983 4:+71435539 MsG0480022343.01.T01:CDS
CACCACGAAGACGCAAGACA+AGG 0.641502 4:-71435769 None:intergenic
CGAAGATTTGCATCCCACCA+CGG 0.645483 4:-71435556 None:intergenic
CAAACGTAGAACAAGATGAA+GGG 0.649418 4:-71435990 None:intergenic
AGCCAAGATTCAGGACAAGG+AGG 0.652071 4:+71435646 MsG0480022343.01.T01:CDS
GCATTCCTCCAGATCAGCAG+AGG 0.658918 4:+71435669 MsG0480022343.01.T01:CDS
TGCTGACTACAACATTCAGA+AGG 0.660012 4:+71436417 MsG0480022343.01.T01:CDS
GAATCCCACCTGATCAGCAG+AGG 0.663372 4:+71436125 MsG0480022343.01.T01:CDS
GAATCCCACCAGATCAGCAG+AGG 0.663372 4:+71436353 MsG0480022343.01.T01:CDS
GGACACTATTGACAATGTGA+AGG 0.664897 4:+71435853 MsG0480022343.01.T01:CDS
ACGGAGCACCAAATGGAGGG+TGG 0.669592 4:-71435531 None:intergenic
GGCCAAGATACAAGACAAGG+AGG 0.669981 4:+71435874 MsG0480022343.01.T01:CDS
TGGAAAGACAATCACCCTTG+AGG 0.681546 4:+71435592 MsG0480022343.01.T01:CDS
GCCAAGATACAAGACAAGGA+GGG 0.683116 4:+71435875 MsG0480022343.01.T01:CDS
GAAGGCCAAGATACAAGACA+AGG 0.721748 4:+71435871 MsG0480022343.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTTATTTAGTAAAATGA+CGG - Chr4:71436622-71436641 None:intergenic 15.0%
!! ATGAATCTATCATATATAAT+AGG - Chr4:71435251-71435270 None:intergenic 15.0%
!!! AAAAAAAATGACTTTTTTGT+TGG - Chr4:71435174-71435193 None:intergenic 15.0%
!!! AAAAGTCATTTTTTTTAAAG+TGG + Chr4:71435178-71435197 MsG0480022343.01.T01:intron 15.0%
!!! GTTTTTTTTTTTTTAGAACT+TGG + Chr4:71436539-71436558 MsG0480022343.01.T01:three_prime_UTR 15.0%
!! AATCAGCAGTTAAATATTAT+AGG - Chr4:71434937-71434956 None:intergenic 20.0%
!! ATCATATATAATAGGCTTAA+AGG - Chr4:71435243-71435262 None:intergenic 20.0%
!! TAAAATTCGAATTCTAACAA+TGG - Chr4:71435098-71435117 None:intergenic 20.0%
!!! AATTTTATGTTGATCAAAGA+TGG + Chr4:71434621-71434640 MsG0480022343.01.T01:intron 20.0%
!!! ATAATAATCGAAGTGTTAAT+TGG - Chr4:71434472-71434491 None:intergenic 20.0%
!!! ATTGTTAGAATTCGAATTTT+AGG + Chr4:71435097-71435116 MsG0480022343.01.T01:intron 20.0%
!!! ATTTGTTTTTCGTTTGTTTT+GGG + Chr4:71435308-71435327 MsG0480022343.01.T01:intron 20.0%
!!! GTCAAATTTGAATTTGATTT+AGG + Chr4:71434512-71434531 MsG0480022343.01.T01:intron 20.0%
!!! GTCATTTTACTAAATAAATG+TGG + Chr4:71436621-71436640 MsG0480022343.01.T01:three_prime_UTR 20.0%
!!! TAATAATCGAAGTGTTAATT+GGG - Chr4:71434471-71434490 None:intergenic 20.0%
!!! TCATTTGTTTTTGTTTGTTT+GGG + Chr4:71435004-71435023 MsG0480022343.01.T01:intron 20.0%
!!! TGATTTGTTATTGTTTGTTT+TGG + Chr4:71434960-71434979 MsG0480022343.01.T01:intron 20.0%
!!! TTCATTTGTTTTTGTTTGTT+TGG + Chr4:71435003-71435022 MsG0480022343.01.T01:intron 20.0%
!!! TTGTTAGAATTCGAATTTTA+GGG + Chr4:71435098-71435117 MsG0480022343.01.T01:intron 20.0%
! AAAATTGTAATCTTGTAACC+AGG + Chr4:71434793-71434812 MsG0480022343.01.T01:intron 25.0%
! AAATTGTAATCTTGTAACCA+GGG + Chr4:71434794-71434813 MsG0480022343.01.T01:intron 25.0%
! CAGGATAATAGAAAACTTAT+GGG - Chr4:71436705-71436724 None:intergenic 25.0%
! CATATAAATCGTCAGATATA+TGG + Chr4:71434676-71434695 MsG0480022343.01.T01:intron 25.0%
! TAATGTTAAGGCAAAAATAC+AGG + Chr4:71436093-71436112 MsG0480022343.01.T01:CDS 25.0%
! TCAGAGACTAATCTAATTAA+AGG - Chr4:71434734-71434753 None:intergenic 25.0%
! TGAAAAACTATGTTTGATGT+GGG + Chr4:71436583-71436602 MsG0480022343.01.T01:three_prime_UTR 25.0%
! TTGAAAAACTATGTTTGATG+TGG + Chr4:71436582-71436601 MsG0480022343.01.T01:three_prime_UTR 25.0%
!! CATTCGATTGATTTATTGAT+TGG + Chr4:71434759-71434778 MsG0480022343.01.T01:intron 25.0%
!! CTGTTAGAATTCGAATTTTA+GGG + Chr4:71434562-71434581 MsG0480022343.01.T01:intron 25.0%
!! TCTGTTAGAATTCGAATTTT+AGG + Chr4:71434561-71434580 MsG0480022343.01.T01:intron 25.0%
!!! CATCAAACATAGTTTTTCAA+AGG - Chr4:71436582-71436601 None:intergenic 25.0%
!!! CATTTGTTTTTCGTTTGTTT+TGG + Chr4:71435307-71435326 MsG0480022343.01.T01:intron 25.0%
!!! CTTTTAAAAAGTTGCGATTT+TGG + Chr4:71435146-71435165 MsG0480022343.01.T01:intron 25.0%
!!! TCGCAACTTTTTAAAAGTTA+AGG - Chr4:71435143-71435162 None:intergenic 25.0%
!!! TGATTTAGGTTTTTAGACAT+CGG + Chr4:71434526-71434545 MsG0480022343.01.T01:intron 25.0%
!!! TTTTTTTAGAACTTGGTCAA+TGG + Chr4:71436546-71436565 MsG0480022343.01.T01:three_prime_UTR 25.0%
AAAAAAAAACCAAAGACCTG+TGG - Chr4:71436529-71436548 None:intergenic 30.0%
AGATACCATAGACAATGTTA+AGG + Chr4:71435397-71435416 MsG0480022343.01.T01:CDS 30.0%
AGATACCATCGATAATGTTA+AGG + Chr4:71436081-71436100 MsG0480022343.01.T01:CDS 30.0%
AGATCACCTAGTATATTTAC+AGG - Chr4:71434871-71434890 None:intergenic 30.0%
ATGATACCTTGAATTGGAAT+TGG - Chr4:71434431-71434450 None:intergenic 30.0%
CAAAAATTCAAGACAAGGAA+GGG + Chr4:71435420-71435439 MsG0480022343.01.T01:CDS 30.0%
CCAGGATAATAGAAAACTTA+TGG - Chr4:71436706-71436725 None:intergenic 30.0%
GATCACCTAGTATATTTACA+GGG - Chr4:71434870-71434889 None:intergenic 30.0%
GTCTTCAGATCTTTGAATAA+GGG + Chr4:71434643-71434662 MsG0480022343.01.T01:intron 30.0%
TAAGGCAAAAATTCAAGACA+AGG + Chr4:71435415-71435434 MsG0480022343.01.T01:CDS 30.0%
TCAATTCCAATTCCAATTCA+AGG + Chr4:71434422-71434441 MsG0480022343.01.T01:five_prime_UTR 30.0%
TCTTCAGATCTTTGAATAAG+GGG + Chr4:71434644-71434663 MsG0480022343.01.T01:intron 30.0%
TGCAGATTATAACATCCAAA+AGG + Chr4:71435505-71435524 MsG0480022343.01.T01:CDS 30.0%
TGTTTCCCTGTAAATATACT+AGG + Chr4:71434862-71434881 MsG0480022343.01.T01:intron 30.0%
TTATGGGTAACCAATTCAAA+TGG - Chr4:71436689-71436708 None:intergenic 30.0%
TTGGATGTTATAATCTGCAA+GGG - Chr4:71435504-71435523 None:intergenic 30.0%
TTTGGATGTTATAATCTGCA+AGG - Chr4:71435505-71435524 None:intergenic 30.0%
! AGGGTTGCTATTGATTATTA+GGG + Chr4:71434813-71434832 MsG0480022343.01.T01:intron 30.0%
! ATTACTTCTGCCATTTGAAT+TGG + Chr4:71436676-71436695 MsG0480022343.01.T01:three_prime_UTR 30.0%
! ATTTTTGTGAAGACATTGAC+CGG + Chr4:71436256-71436275 MsG0480022343.01.T01:CDS 30.0%
! CCATAAGTTTTCTATTATCC+TGG + Chr4:71436703-71436722 MsG0480022343.01.T01:three_prime_UTR 30.0%
! TTTGGTACGAATCTCTTTTT+CGG - Chr4:71434379-71434398 None:intergenic 30.0%
! TTTTGCCTTAACATTATCGA+TGG - Chr4:71436089-71436108 None:intergenic 30.0%
! TTTTGCCTTAACATTGTCTA+TGG - Chr4:71435405-71435424 None:intergenic 30.0%
!! AGACACAATTGATAATGTGA+AGG + Chr4:71436309-71436328 MsG0480022343.01.T01:CDS 30.0%
ACCCCTAAGTTTGCAAAATT+AGG - Chr4:71435212-71435231 None:intergenic 35.0%
AGATCTTTGAATAAGGGGTT+AGG + Chr4:71434649-71434668 MsG0480022343.01.T01:intron 35.0%
ATCTTTGTGAAGACTTTGAC+AGG + Chr4:71436028-71436047 MsG0480022343.01.T01:CDS 35.0%
CAAACGTAGAACAAGATGAA+GGG - Chr4:71435993-71436012 None:intergenic 35.0%
CCCCTAAGTTTGCAAAATTA+GGG - Chr4:71435211-71435230 None:intergenic 35.0%
CCCTAAGTTTGCAAAATTAG+GGG - Chr4:71435210-71435229 None:intergenic 35.0%
CTAATAATCAATAGCAACCC+TGG - Chr4:71434814-71434833 None:intergenic 35.0%
CTGAATGTTATAATCAGCCA+AGG - Chr4:71435960-71435979 None:intergenic 35.0%
GAGTAGATGATACCTTGAAT+TGG - Chr4:71434437-71434456 None:intergenic 35.0%
GCAAAAATTCAAGACAAGGA+AGG + Chr4:71435419-71435438 MsG0480022343.01.T01:CDS 35.0%
GGAATTGGAATTGAAACGAA+CGG - Chr4:71434416-71434435 None:intergenic 35.0%
GGCTGATTATAACATTCAGA+AGG + Chr4:71435961-71435980 MsG0480022343.01.T01:CDS 35.0%
GGTCTTCAGATCTTTGAATA+AGG + Chr4:71434642-71434661 MsG0480022343.01.T01:intron 35.0%
GTGCAACAAAGTAAAGACTA+CGG - Chr4:71434915-71434934 None:intergenic 35.0%
GTTTATCGTGTGTCTTCATT+AGG + Chr4:71434584-71434603 MsG0480022343.01.T01:intron 35.0%
TAAGGCAAAAATACAGGACA+AGG + Chr4:71436099-71436118 MsG0480022343.01.T01:CDS 35.0%
TAATGTCAAAGCCAAGATTC+AGG + Chr4:71435637-71435656 MsG0480022343.01.T01:CDS 35.0%
TAATGTGAAGGCAAAAATCC+AGG + Chr4:71436321-71436340 MsG0480022343.01.T01:CDS 35.0%
TCAAACGTAGAACAAGATGA+AGG - Chr4:71435994-71436013 None:intergenic 35.0%
TCATCTTGTTCTACGTTTGA+GGG + Chr4:71435994-71436013 MsG0480022343.01.T01:CDS 35.0%
TGCAACAAAGTAAAGACTAC+GGG - Chr4:71434914-71434933 None:intergenic 35.0%
TTCATCTTGTTCTACGTTTG+AGG + Chr4:71435993-71436012 MsG0480022343.01.T01:CDS 35.0%
! ACCCCTAATTTTGCAAACTT+AGG + Chr4:71435206-71435225 MsG0480022343.01.T01:intron 35.0%
! ATTTTTGTTAAGACCCTCAC+GGG + Chr4:71435800-71435819 MsG0480022343.01.T01:CDS 35.0%
! CAGGGTTGCTATTGATTATT+AGG + Chr4:71434812-71434831 MsG0480022343.01.T01:intron 35.0%
! CCCCTAATTTTGCAAACTTA+GGG + Chr4:71435207-71435226 MsG0480022343.01.T01:intron 35.0%
! CCCTAATTTTGCAAACTTAG+GGG + Chr4:71435208-71435227 MsG0480022343.01.T01:intron 35.0%
! GATTTTTGTTAAGACCCTCA+CGG + Chr4:71435799-71435818 MsG0480022343.01.T01:CDS 35.0%
!! CTTGGCTTTGACATTATCAA+TGG - Chr4:71435633-71435652 None:intergenic 35.0%
!! TGGATAATTTGCTATCGTTG+TGG + Chr4:71436641-71436660 MsG0480022343.01.T01:three_prime_UTR 35.0%
AAAATCAACCTTTGCTGGTC+TGG - Chr4:71435908-71435927 None:intergenic 40.0%
AAAGACCATTACATTGGAGG+TGG + Chr4:71436051-71436070 MsG0480022343.01.T01:CDS 40.0%
ACTTGGTCAATGGTCTGTAA+CGG + Chr4:71436556-71436575 MsG0480022343.01.T01:three_prime_UTR 40.0%
ACTTTCCACCTCCAATGTAA+TGG - Chr4:71436059-71436078 None:intergenic 40.0%
AGGAAAGACCATTACATTGG+AGG + Chr4:71436048-71436067 MsG0480022343.01.T01:CDS 40.0%
ATCTTCGTCAAGACTCTTAC+CGG + Chr4:71435344-71435363 MsG0480022343.01.T01:CDS 40.0%
CACGGGCAAAACAATTACTT+TGG + Chr4:71435817-71435836 MsG0480022343.01.T01:CDS 40.0%
CAGCAAAAATCAACCTTTGC+TGG - Chr4:71435913-71435932 None:intergenic 40.0%
CATCTTGTTCTACGTTTGAG+GGG + Chr4:71435995-71436014 MsG0480022343.01.T01:CDS 40.0%
CTGAATGTTGTAGTCAGCAA+GGG - Chr4:71436416-71436435 None:intergenic 40.0%
GACAGGAAAGACCATTACAT+TGG + Chr4:71436045-71436064 MsG0480022343.01.T01:CDS 40.0%
GCAAAAATACAGGACAAGGA+GGG + Chr4:71436103-71436122 MsG0480022343.01.T01:CDS 40.0%
GGACACTATTGACAATGTGA+AGG + Chr4:71435853-71435872 MsG0480022343.01.T01:CDS 40.0%
GTCTGAACTTTCTACCTCTA+AGG - Chr4:71436293-71436312 None:intergenic 40.0%
TCTGAATGTTGTAGTCAGCA+AGG - Chr4:71436417-71436436 None:intergenic 40.0%
! AAATCAACCTTTGCTGGTCT+GGG - Chr4:71435907-71435926 None:intergenic 40.0%
! GATAATTGCGTCTTTCAGGT+AGG + Chr4:71436728-71436747 MsG0480022343.01.T01:three_prime_UTR 40.0%
! TACTTTGGAGATAGAGAGCT+CGG + Chr4:71435832-71435851 MsG0480022343.01.T01:CDS 40.0%
! TGCTGACTACAACATTCAGA+AGG + Chr4:71436417-71436436 MsG0480022343.01.T01:CDS 40.0%
!! AAGTAATTGTTTTGCCCGTG+AGG - Chr4:71435817-71435836 None:intergenic 40.0%
!! ACTTTCTACCTCTAAGGTGA+TGG - Chr4:71436287-71436306 None:intergenic 40.0%
!! AGTAATTGTTTTGCCCGTGA+GGG - Chr4:71435816-71435835 None:intergenic 40.0%
!! CAGCAAAGGTTGATTTTTGC+TGG + Chr4:71435911-71435930 MsG0480022343.01.T01:CDS 40.0%
!! CAGTGTTGCAAAGCTGTTTT+AGG + Chr4:71436490-71436509 MsG0480022343.01.T01:three_prime_UTR 40.0%
!!! AGCTGTTTTAGGATGTGTTG+AGG + Chr4:71436501-71436520 MsG0480022343.01.T01:three_prime_UTR 40.0%
AAAGACAATCACCCTTGAGG+TGG + Chr4:71435595-71435614 MsG0480022343.01.T01:CDS 45.0%
AAGATCAACCTCTGCTGATC+AGG - Chr4:71436136-71436155 None:intergenic 45.0%
AAGATCAACCTCTGCTGATC+TGG - Chr4:71436136-71436155 None:intergenic 45.0%
ACCCTCCTTGTCTTGTATCT+TGG - Chr4:71435879-71435898 None:intergenic 45.0%
ACTCTCAACTTCGAGAGTGA+TGG - Chr4:71435375-71435394 None:intergenic 45.0%
ATCTTCGTGAAGACTCTCAC+TGG + Chr4:71435572-71435591 MsG0480022343.01.T01:CDS 45.0%
CAAAGCCAAGATTCAGGACA+AGG + Chr4:71435643-71435662 MsG0480022343.01.T01:CDS 45.0%
CACCACGAAGACGTAAAACA+AGG - Chr4:71436456-71436475 None:intergenic 45.0%
GAAAGACGCAATTATCGTCC+AGG - Chr4:71436724-71436743 None:intergenic 45.0%
GAAGGCAAAAATCCAGGACA+AGG + Chr4:71436327-71436346 MsG0480022343.01.T01:CDS 45.0%
GAAGGCCAAGATACAAGACA+AGG + Chr4:71435871-71435890 MsG0480022343.01.T01:CDS 45.0%
GATCTTTGCTGGGAAGCAAT+TGG + Chr4:71436378-71436397 MsG0480022343.01.T01:CDS 45.0%
GCAAAAATCCAGGACAAGGA+AGG + Chr4:71436331-71436350 MsG0480022343.01.T01:CDS 45.0%
GCCAAGATACAAGACAAGGA+GGG + Chr4:71435875-71435894 MsG0480022343.01.T01:CDS 45.0%
GGACGATAATTGCGTCTTTC+AGG + Chr4:71436724-71436743 MsG0480022343.01.T01:three_prime_UTR 45.0%
GGCAAAAATACAGGACAAGG+AGG + Chr4:71436102-71436121 MsG0480022343.01.T01:CDS 45.0%
TGGAAAGACAATCACCCTTG+AGG + Chr4:71435592-71435611 MsG0480022343.01.T01:CDS 45.0%
TTTCGGTTCTCTGCAACCAA+GGG - Chr4:71434362-71434381 None:intergenic 45.0%
! AATCAACCTTTGCTGGTCTG+GGG - Chr4:71435906-71435925 None:intergenic 45.0%
! AGCAGAGGTTGATCTTTGCT+GGG + Chr4:71436140-71436159 MsG0480022343.01.T01:CDS 45.0%
! GTAAAGACTACGGGTTACAG+AGG - Chr4:71434905-71434924 None:intergenic 45.0%
! TTTTCGGTTCTCTGCAACCA+AGG - Chr4:71434363-71434382 None:intergenic 45.0%
!! CTCTAAGGTGATGGTCTTTC+CGG - Chr4:71436278-71436297 None:intergenic 45.0%
!!! CACCTTGTTTTACGTCTTCG+TGG + Chr4:71436451-71436470 MsG0480022343.01.T01:CDS 45.0%
!!! CTTGTTTTACGTCTTCGTGG+TGG + Chr4:71436454-71436473 MsG0480022343.01.T01:CDS 45.0%
!!! ATTCATATTTTTTATTTTTT+TGG + Chr4:71435265-71435284 MsG0480022343.01.T01:intron 5.0%
!!! ATTTATATTTTTGTTTATTT+TGG + Chr4:71435054-71435073 MsG0480022343.01.T01:intron 5.0%
AAAATGAGACGCTGCTGGTC+AGG - Chr4:71435452-71435471 None:intergenic 50.0%
AAAGGAGTCCACCCTCCATT+TGG + Chr4:71435523-71435542 MsG0480022343.01.T01:CDS 50.0%
AAGATGAGCCTCTGCTGATC+TGG - Chr4:71435680-71435699 None:intergenic 50.0%
AGCCAAGATTCAGGACAAGG+AGG + Chr4:71435646-71435665 MsG0480022343.01.T01:CDS 50.0%
AGGATGTGTTGAGGTTCCAC+AGG + Chr4:71436510-71436529 MsG0480022343.01.T01:three_prime_UTR 50.0%
ATCAACCTCTGCTGATCAGG+TGG - Chr4:71436133-71436152 None:intergenic 50.0%
ATCAACCTCTGCTGATCTGG+TGG - Chr4:71436361-71436380 None:intergenic 50.0%
ATCAGAGCTCTCCACCTCAA+GGG - Chr4:71435609-71435628 None:intergenic 50.0%
CAACAAACTCACCGTTCCCT+TGG + Chr4:71434343-71434362 MsG0480022343.01.T01:five_prime_UTR 50.0%
CAGACGAAGGACAAGGTGAA+GGG - Chr4:71436221-71436240 None:intergenic 50.0%
CAGCAAAAATGAGACGCTGC+TGG - Chr4:71435457-71435476 None:intergenic 50.0%
CGAAGATTTGCATCCCACCA+CGG - Chr4:71435559-71435578 None:intergenic 50.0%
CGGAAAGACCATCACCTTAG+AGG + Chr4:71436276-71436295 MsG0480022343.01.T01:CDS 50.0%
CTTGTTCTACGTTTGAGGGG+AGG + Chr4:71435998-71436017 MsG0480022343.01.T01:CDS 50.0%
CTTTGCTGGGAAGCAATTGG+AGG + Chr4:71436381-71436400 MsG0480022343.01.T01:CDS 50.0%
GAAAGCAGCTTGAAGATGGC+AGG + Chr4:71435933-71435952 MsG0480022343.01.T01:CDS 50.0%
GCCAAGATTCAGGACAAGGA+GGG + Chr4:71435647-71435666 MsG0480022343.01.T01:CDS 50.0%
GCTGGAAAGCAGCTTGAAGA+TGG + Chr4:71435929-71435948 MsG0480022343.01.T01:CDS 50.0%
GCTTGAAGATGGTCGCACTT+TGG + Chr4:71436168-71436187 MsG0480022343.01.T01:CDS 50.0%
GGAAGCAATTGGAGGATGGA+AGG + Chr4:71436389-71436408 MsG0480022343.01.T01:CDS 50.0%
GGCCAAGATACAAGACAAGG+AGG + Chr4:71435874-71435893 MsG0480022343.01.T01:CDS 50.0%
GTTCTCTGCAACCAAGGGAA+CGG - Chr4:71434357-71434376 None:intergenic 50.0%
GTTGAGGTTCCACAGGTCTT+TGG + Chr4:71436517-71436536 MsG0480022343.01.T01:three_prime_UTR 50.0%
TATCAGAGCTCTCCACCTCA+AGG - Chr4:71435610-71435629 None:intergenic 50.0%
TCAACCTCTGCTGATCAGGT+GGG - Chr4:71436132-71436151 None:intergenic 50.0%
TCAACCTCTGCTGATCTGGT+GGG - Chr4:71436360-71436379 None:intergenic 50.0%
TCACCTTGTCCTTCGTCTGA+GGG + Chr4:71436222-71436241 MsG0480022343.01.T01:CDS 50.0%
TCAGACGAAGGACAAGGTGA+AGG - Chr4:71436222-71436241 None:intergenic 50.0%
TTCACCTTGTCCTTCGTCTG+AGG + Chr4:71436221-71436240 MsG0480022343.01.T01:CDS 50.0%
! ATCAACCTTTGCTGGTCTGG+GGG - Chr4:71435905-71435924 None:intergenic 50.0%
! CAGCAGAGGTTGATCTTTGC+TGG + Chr4:71436139-71436158 MsG0480022343.01.T01:CDS 50.0%
! CATTTTTGCTGGCAAGCAGC+TGG + Chr4:71435466-71435485 MsG0480022343.01.T01:CDS 50.0%
! GACTACGGGTTACAGAGGAT+TGG - Chr4:71434900-71434919 None:intergenic 50.0%
! GGTGAAGAGTCGACTCTTTC+TGG - Chr4:71435751-71435770 None:intergenic 50.0%
! TTCGAGAGTGATGGTCTTGC+CGG - Chr4:71435366-71435385 None:intergenic 50.0%
!! AACGAACGGTGTTGTGTGCT+AGG - Chr4:71434402-71434421 None:intergenic 50.0%
!! AATGGAGGGTGGACTCCTTT+TGG - Chr4:71435523-71435542 None:intergenic 50.0%
!! ACGGTGTTGTGTGCTAGGTT+TGG - Chr4:71434397-71434416 None:intergenic 50.0%
!! CAGCAGCGTCTCATTTTTGC+TGG + Chr4:71435455-71435474 MsG0480022343.01.T01:CDS 50.0%
ACGAAGGACAAGGTGAAGGG+TGG - Chr4:71436218-71436237 None:intergenic 55.0%
ATGAGCCTCTGCTGATCTGG+AGG - Chr4:71435677-71435696 None:intergenic 55.0%
CACCACGAAGACGCAAGACA+AGG - Chr4:71435772-71435791 None:intergenic 55.0%
CACCTTGTCCTTCGTCTGAG+GGG + Chr4:71436223-71436242 MsG0480022343.01.T01:CDS 55.0%
CACCTTGTCTTGCGTCTTCG+TGG + Chr4:71435767-71435786 MsG0480022343.01.T01:CDS 55.0%
CAGCAGAGGCTCATCTTTGC+TGG + Chr4:71435683-71435702 MsG0480022343.01.T01:CDS 55.0%
CTTGTCTTGCGTCTTCGTGG+TGG + Chr4:71435770-71435789 MsG0480022343.01.T01:CDS 55.0%
GAATCCCACCAGATCAGCAG+AGG + Chr4:71436353-71436372 MsG0480022343.01.T01:CDS 55.0%
GAATCCCACCTGATCAGCAG+AGG + Chr4:71436125-71436144 MsG0480022343.01.T01:CDS 55.0%
GCATTCCTCCAGATCAGCAG+AGG + Chr4:71435669-71435688 MsG0480022343.01.T01:CDS 55.0%
GCCCTCCTTGTCCTGAATCT+TGG - Chr4:71435651-71435670 None:intergenic 55.0%
GCTGGAAAGCAGCTCGAAGA+TGG + Chr4:71435701-71435720 MsG0480022343.01.T01:CDS 55.0%
GCTGGGAAGCAATTGGAGGA+TGG + Chr4:71436385-71436404 MsG0480022343.01.T01:CDS 55.0%
GCTTGAAGATGGCAGGACCT+TGG + Chr4:71435940-71435959 MsG0480022343.01.T01:CDS 55.0%
GTGGGATTCCTTCCTTGTCC+TGG - Chr4:71436342-71436361 None:intergenic 55.0%
TTTGCATCCCACCACGGAGA+CGG - Chr4:71435553-71435572 None:intergenic 55.0%
! GAGACGGAGCACCAAATGGA+GGG - Chr4:71435537-71435556 None:intergenic 55.0%
! TCAACCTTTGCTGGTCTGGG+GGG - Chr4:71435904-71435923 None:intergenic 55.0%
! TTTTGCTGGCAAGCAGCTGG+AGG + Chr4:71435469-71435488 MsG0480022343.01.T01:CDS 55.0%
ATGAGACGCTGCTGGTCAGG+TGG - Chr4:71435449-71435468 None:intergenic 60.0%
CTCCCCTCAGACGAAGGACA+AGG - Chr4:71436228-71436247 None:intergenic 60.0%
CTTGTCCTTCGTCTGAGGGG+AGG + Chr4:71436226-71436245 MsG0480022343.01.T01:CDS 60.0%
GCATACCTCCCCTCAGACGA+AGG - Chr4:71436234-71436253 None:intergenic 60.0%
GTATCCCCCCAGACCAGCAA+AGG + Chr4:71435897-71435916 MsG0480022343.01.T01:CDS 60.0%
TGAGACGCTGCTGGTCAGGT+GGG - Chr4:71435448-71435467 None:intergenic 60.0%
! ACGGAGCACCAAATGGAGGG+TGG - Chr4:71435534-71435553 None:intergenic 60.0%
! CACGGAGACGGAGCACCAAA+TGG - Chr4:71435541-71435560 None:intergenic 60.0%
! GGAGACGGAGCACCAAATGG+AGG - Chr4:71435538-71435557 None:intergenic 60.0%
!! CATTTGGTGCTCCGTCTCCG+TGG + Chr4:71435539-71435558 MsG0480022343.01.T01:CDS 60.0%
CTGGCAAGCAGCTGGAGGAC+GGG + Chr4:71435474-71435493 MsG0480022343.01.T01:CDS 65.0%
GCTGGCAAGCAGCTGGAGGA+CGG + Chr4:71435473-71435492 MsG0480022343.01.T01:CDS 65.0%
TGGTGCTCCGTCTCCGTGGT+GGG + Chr4:71435543-71435562 MsG0480022343.01.T01:CDS 65.0%
! TTGGTGCTCCGTCTCCGTGG+TGG + Chr4:71435542-71435561 MsG0480022343.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 71434341 71436819 71434341 ID=MsG0480022343.01;Name=MsG0480022343.01
Chr4 mRNA 71434341 71436819 71434341 ID=MsG0480022343.01.T01;Parent=MsG0480022343.01;Name=MsG0480022343.01.T01;_AED=0.48;_eAED=0.48;_QI=103|1|1|1|0|0.5|2|336|381
Chr4 exon 71434341 71434443 71434341 ID=MsG0480022343.01.T01:exon:2460;Parent=MsG0480022343.01.T01
Chr4 exon 71435338 71436819 71435338 ID=MsG0480022343.01.T01:exon:2461;Parent=MsG0480022343.01.T01
Chr4 five_prime_UTR 71434341 71434443 71434341 ID=MsG0480022343.01.T01:five_prime_utr;Parent=MsG0480022343.01.T01
Chr4 CDS 71435338 71436483 71435338 ID=MsG0480022343.01.T01:cds;Parent=MsG0480022343.01.T01
Chr4 three_prime_UTR 71436484 71436819 71436484 ID=MsG0480022343.01.T01:three_prime_utr;Parent=MsG0480022343.01.T01
Gene Sequence

>MsG0480022343.01.T01

ATGCAAATCTTCGTCAAGACTCTTACCGGCAAGACCATCACTCTCGAAGTTGAGAGTTCAGATACCATAGACAATGTTAAGGCAAAAATTCAAGACAAGGAAGGGATCCCACCTGACCAGCAGCGTCTCATTTTTGCTGGCAAGCAGCTGGAGGACGGGCGTACCCTTGCAGATTATAACATCCAAAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTCCGTGGTGGGATGCAAATCTTCGTGAAGACTCTCACTGGAAAGACAATCACCCTTGAGGTGGAGAGCTCTGATACCATTGATAATGTCAAAGCCAAGATTCAGGACAAGGAGGGCATTCCTCCAGATCAGCAGAGGCTCATCTTTGCTGGAAAGCAGCTCGAAGATGGCAGAACTCTTGCTGATTACAACATCCAGAAAGAGTCGACTCTTCACCTTGTCTTGCGTCTTCGTGGTGGCATGCAGATTTTTGTTAAGACCCTCACGGGCAAAACAATTACTTTGGAGATAGAGAGCTCGGACACTATTGACAATGTGAAGGCCAAGATACAAGACAAGGAGGGTATCCCCCCAGACCAGCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGGACCTTGGCTGATTATAACATTCAGAAGGAATCAACCCTTCATCTTGTTCTACGTTTGAGGGGAGGCATGCAGATCTTTGTGAAGACTTTGACAGGAAAGACCATTACATTGGAGGTGGAAAGTTCAGATACCATCGATAATGTTAAGGCAAAAATACAGGACAAGGAGGGAATCCCACCTGATCAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTTGAAGATGGTCGCACTTTGGCTGATTATAACATTCAGAAAGAGTCCACCCTTCACCTTGTCCTTCGTCTGAGGGGAGGTATGCAGATTTTTGTGAAGACATTGACCGGAAAGACCATCACCTTAGAGGTAGAAAGTTCAGACACAATTGATAATGTGAAGGCAAAAATCCAGGACAAGGAAGGAATCCCACCAGATCAGCAGAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGAAGGACCCTTGCTGACTACAACATTCAGAAGGAGTCTACTCTTCACCTTGTTTTACGTCTTCGTGGTGGATTCTAA

Protein sequence

>MsG0480022343.01.T01

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEIESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF*