Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022359.01.T01 | RHN62398.1 | 95.146 | 103 | 4 | 1 | 1 | 102 | 11 | 113 | 1.52E-61 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022359.01.T01 | Q38741 | 45.098 | 102 | 46 | 2 | 1 | 102 | 1 | 92 | 2.09E-19 | 80.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022359.01.T01 | A0A396IC84 | 95.146 | 103 | 4 | 1 | 1 | 102 | 11 | 113 | 7.26e-62 | 195 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048660.01 | MsG0480022359.01 | 0.849780 | 2.596047e-60 | 4.976340e-57 |
| MsG0180000241.01 | MsG0480022359.01 | 0.844124 | 9.180446e-59 | 1.467642e-55 |
| MsG0180001088.01 | MsG0480022359.01 | 0.802811 | 4.700360e-49 | 2.324557e-46 |
| MsG0180004246.01 | MsG0480022359.01 | 0.800469 | 1.420110e-48 | 6.617535e-46 |
| MsG0180004988.01 | MsG0480022359.01 | 0.809735 | 1.633737e-50 | 9.668418e-48 |
| MsG0180006054.01 | MsG0480022359.01 | 0.828908 | 6.920127e-55 | 6.972407e-52 |
| MsG0280006309.01 | MsG0480022359.01 | 0.812947 | 3.280147e-51 | 2.113675e-48 |
| MsG0280010807.01 | MsG0480022359.01 | 0.819251 | 1.280919e-52 | 9.805967e-50 |
| MsG0280011404.01 | MsG0480022359.01 | 0.806930 | 6.475046e-50 | 3.559214e-47 |
| MsG0380012567.01 | MsG0480022359.01 | 0.811136 | 8.140619e-51 | 4.999189e-48 |
| MsG0380014464.01 | MsG0480022359.01 | 0.809588 | 1.757049e-50 | 1.035793e-47 |
| MsG0480018653.01 | MsG0480022359.01 | 0.812306 | 4.530360e-51 | 2.870313e-48 |
| MsG0480019313.01 | MsG0480022359.01 | 0.817884 | 2.616042e-52 | 1.928571e-49 |
| MsG0480019711.01 | MsG0480022359.01 | 0.805807 | 1.117043e-49 | 5.966119e-47 |
| MsG0480021561.01 | MsG0480022359.01 | 0.847333 | 1.235597e-59 | 2.188592e-56 |
| MsG0480022359.01 | MsG0480022978.01 | 0.814918 | 1.205999e-51 | 8.197252e-49 |
| MsG0480022359.01 | MsG0480023150.01 | 0.813381 | 2.634802e-51 | 1.718017e-48 |
| MsG0480022359.01 | MsG0480023251.01 | 0.801485 | 8.806366e-49 | 4.210619e-46 |
| MsG0480022359.01 | MsG0480023723.01 | 0.802082 | 6.642680e-49 | 3.224498e-46 |
| MsG0480022359.01 | MsG0480023877.01 | 0.802947 | 4.403992e-49 | 2.185396e-46 |
| MsG0480022359.01 | MsG0580024790.01 | -0.816462 | 5.461567e-52 | 3.872336e-49 |
| MsG0480022359.01 | MsG0580025053.01 | 0.808303 | 3.309311e-50 | 1.885484e-47 |
| MsG0480022359.01 | MsG0580025055.01 | 0.807477 | 4.959170e-50 | 2.765022e-47 |
| MsG0480022359.01 | MsG0580025612.01 | 0.800243 | 1.579338e-48 | 7.317447e-46 |
| MsG0480022359.01 | MsG0580025827.01 | 0.839787 | 1.285942e-57 | 1.794993e-54 |
| MsG0480022359.01 | MsG0580025832.01 | 0.824097 | 9.707830e-54 | 8.515436e-51 |
| MsG0480022359.01 | MsG0580026122.01 | 0.814784 | 1.291373e-51 | 8.746111e-49 |
| MsG0480022359.01 | MsG0580027955.01 | 0.802925 | 4.451446e-49 | 2.207746e-46 |
| MsG0480022359.01 | MsG0580029472.01 | 0.840867 | 6.712042e-58 | 9.689216e-55 |
| MsG0480022359.01 | MsG0680030616.01 | 0.800420 | 1.453602e-48 | 6.765519e-46 |
| MsG0480022359.01 | MsG0680031702.01 | 0.800818 | 1.205732e-48 | 5.668431e-46 |
| MsG0480022359.01 | MsG0680031998.01 | 0.836528 | 8.874296e-57 | 1.121330e-53 |
| MsG0480022359.01 | MsG0680033465.01 | 0.801468 | 8.876220e-49 | 4.242181e-46 |
| MsG0480022359.01 | MsG0680034601.01 | 0.803163 | 3.973865e-49 | 1.982947e-46 |
| MsG0480022359.01 | MsG0680034721.01 | 0.824609 | 7.356761e-54 | 6.549413e-51 |
| MsG0480022359.01 | MsG0680035707.01 | 0.842671 | 2.243083e-58 | 3.425546e-55 |
| MsG0480022359.01 | MsG0780036593.01 | 0.805453 | 1.325013e-49 | 7.012927e-47 |
| MsG0480022359.01 | MsG0780036602.01 | 0.806306 | 8.769075e-50 | 4.743657e-47 |
| MsG0480022359.01 | MsG0780037442.01 | 0.815887 | 7.344441e-52 | 5.126030e-49 |
| MsG0480022359.01 | MsG0780041468.01 | 0.808137 | 3.589895e-50 | 2.036463e-47 |
| MsG0480022359.01 | MsG0880041861.01 | 0.805370 | 1.379317e-49 | 7.284588e-47 |
| MsG0480022359.01 | MsG0880041864.01 | 0.820366 | 7.125847e-53 | 5.627089e-50 |
| MsG0480022359.01 | MsG0880043157.01 | 0.830918 | 2.239998e-55 | 2.393761e-52 |
| MsG0480022359.01 | MsG0880044209.01 | 0.818741 | 1.673420e-52 | 1.263125e-49 |
| MsG0480022359.01 | MsG0880045155.01 | -0.814426 | 1.550006e-51 | 1.039727e-48 |
| MsG0480022359.01 | MsG0880047394.01 | 0.815637 | 8.349858e-52 | 5.788571e-49 |
| MsG0380015847.01 | MsG0480022359.01 | -0.809896 | 1.508268e-50 | 8.963279e-48 |
| MsG0380015891.01 | MsG0480022359.01 | 0.808503 | 3.000375e-50 | 1.718473e-47 |
| MsG0380017293.01 | MsG0480022359.01 | 0.823142 | 1.623956e-53 | 1.386750e-50 |
| MsG0380017931.01 | MsG0480022359.01 | 0.818571 | 1.828683e-52 | 1.373817e-49 |
| MsG0280007118.01 | MsG0480022359.01 | 0.832810 | 7.644306e-56 | 8.639104e-53 |
| MsG0280008113.01 | MsG0480022359.01 | 0.801405 | 9.144524e-49 | 4.363444e-46 |
| MsG0280008165.01 | MsG0480022359.01 | 0.835778 | 1.376150e-56 | 1.700075e-53 |
| MsG0280008171.01 | MsG0480022359.01 | 0.851394 | 9.134148e-61 | 1.846290e-57 |
| MsG0280009953.01 | MsG0480022359.01 | 0.800902 | 1.159216e-48 | 5.461803e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022359.01.T01 | MTR_4g088555 | 95.146 | 103 | 4 | 1 | 1 | 102 | 1 | 103 | 2.25e-65 | 194 |
| MsG0480022359.01.T01 | MTR_2g014200 | 63.380 | 71 | 23 | 2 | 33 | 102 | 36 | 104 | 2.56e-23 | 88.2 |
| MsG0480022359.01.T01 | MTR_8g463140 | 65.909 | 44 | 15 | 0 | 59 | 102 | 62 | 105 | 7.69e-18 | 75.1 |
| MsG0480022359.01.T01 | MTR_8g005960 | 47.727 | 88 | 38 | 3 | 27 | 112 | 155 | 236 | 1.27e-15 | 71.6 |
| MsG0480022359.01.T01 | MTR_2g078770 | 50.877 | 57 | 28 | 0 | 46 | 102 | 42 | 98 | 1.80e-13 | 63.5 |
| MsG0480022359.01.T01 | MTR_7g092930 | 59.091 | 44 | 18 | 0 | 59 | 102 | 65 | 108 | 3.46e-13 | 64.7 |
| MsG0480022359.01.T01 | MTR_3g099080 | 45.588 | 68 | 33 | 1 | 39 | 102 | 71 | 138 | 1.39e-12 | 63.2 |
| MsG0480022359.01.T01 | MTR_1g053715 | 57.447 | 47 | 20 | 0 | 56 | 102 | 68 | 114 | 1.88e-12 | 62.8 |
| MsG0480022359.01.T01 | MTR_3g085180 | 42.373 | 59 | 34 | 0 | 44 | 102 | 147 | 205 | 4.54e-12 | 61.6 |
| MsG0480022359.01.T01 | MTR_7g110320 | 46.970 | 66 | 34 | 1 | 47 | 112 | 130 | 194 | 1.18e-11 | 60.8 |
| MsG0480022359.01.T01 | MTR_7g444860 | 60.976 | 41 | 16 | 0 | 62 | 102 | 149 | 189 | 1.18e-11 | 60.5 |
| MsG0480022359.01.T01 | MTR_7g110320 | 46.970 | 66 | 34 | 1 | 47 | 112 | 130 | 194 | 1.42e-11 | 60.5 |
| MsG0480022359.01.T01 | MTR_2g046550 | 46.667 | 60 | 28 | 1 | 47 | 102 | 120 | 179 | 1.72e-11 | 60.1 |
| MsG0480022359.01.T01 | MTR_5g046670 | 44.643 | 56 | 28 | 1 | 50 | 102 | 229 | 284 | 2.40e-11 | 59.7 |
| MsG0480022359.01.T01 | MTR_1g086250 | 49.091 | 55 | 28 | 0 | 48 | 102 | 133 | 187 | 2.58e-11 | 59.7 |
| MsG0480022359.01.T01 | MTR_8g080680 | 43.902 | 82 | 38 | 2 | 29 | 102 | 91 | 172 | 3.04e-11 | 59.3 |
| MsG0480022359.01.T01 | MTR_7g028740 | 46.429 | 56 | 28 | 1 | 47 | 102 | 64 | 117 | 4.06e-11 | 58.9 |
| MsG0480022359.01.T01 | MTR_1g035010 | 49.123 | 57 | 29 | 0 | 46 | 102 | 88 | 144 | 4.11e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022359.01.T01 | AT2G33810 | 57.627 | 59 | 22 | 1 | 44 | 102 | 39 | 94 | 3.04e-17 | 72.4 |
| MsG0480022359.01.T01 | AT1G02065 | 44.048 | 84 | 44 | 2 | 40 | 121 | 164 | 246 | 2.79e-14 | 67.0 |
| MsG0480022359.01.T01 | AT1G02065 | 48.000 | 75 | 36 | 2 | 40 | 112 | 164 | 237 | 3.64e-14 | 67.4 |
| MsG0480022359.01.T01 | AT1G53160 | 54.386 | 57 | 23 | 1 | 46 | 102 | 41 | 94 | 1.02e-13 | 64.3 |
| MsG0480022359.01.T01 | AT1G53160 | 54.386 | 57 | 23 | 1 | 46 | 102 | 41 | 94 | 1.02e-13 | 64.3 |
| MsG0480022359.01.T01 | AT1G53160 | 54.386 | 57 | 23 | 1 | 46 | 102 | 41 | 94 | 1.29e-13 | 63.9 |
| MsG0480022359.01.T01 | AT3G60030 | 50.000 | 56 | 28 | 0 | 47 | 102 | 112 | 167 | 2.66e-13 | 65.5 |
| MsG0480022359.01.T01 | AT1G27360 | 52.830 | 53 | 25 | 0 | 50 | 102 | 163 | 215 | 9.99e-13 | 63.5 |
| MsG0480022359.01.T01 | AT1G27360 | 52.830 | 53 | 25 | 0 | 50 | 102 | 163 | 215 | 9.99e-13 | 63.5 |
| MsG0480022359.01.T01 | AT1G27360 | 52.830 | 53 | 25 | 0 | 50 | 102 | 163 | 215 | 9.99e-13 | 63.5 |
| MsG0480022359.01.T01 | AT1G27360 | 52.830 | 53 | 25 | 0 | 50 | 102 | 163 | 215 | 9.99e-13 | 63.5 |
| MsG0480022359.01.T01 | AT2G47070 | 56.863 | 51 | 21 | 1 | 62 | 112 | 106 | 155 | 1.18e-12 | 63.5 |
| MsG0480022359.01.T01 | AT1G27370 | 39.683 | 63 | 38 | 0 | 40 | 102 | 154 | 216 | 1.50e-12 | 63.2 |
| MsG0480022359.01.T01 | AT1G27370 | 43.860 | 57 | 32 | 0 | 46 | 102 | 160 | 216 | 1.60e-12 | 63.2 |
| MsG0480022359.01.T01 | AT1G27370 | 43.860 | 57 | 32 | 0 | 46 | 102 | 160 | 216 | 1.60e-12 | 63.2 |
| MsG0480022359.01.T01 | AT1G27370 | 43.860 | 57 | 32 | 0 | 46 | 102 | 160 | 216 | 1.60e-12 | 63.2 |
| MsG0480022359.01.T01 | AT1G27370 | 43.860 | 57 | 32 | 0 | 46 | 102 | 160 | 216 | 1.60e-12 | 63.2 |
| MsG0480022359.01.T01 | AT1G27370 | 43.860 | 57 | 32 | 0 | 46 | 102 | 160 | 216 | 1.60e-12 | 63.2 |
| MsG0480022359.01.T01 | AT1G27370 | 43.860 | 57 | 32 | 0 | 46 | 102 | 160 | 216 | 1.60e-12 | 63.2 |
| MsG0480022359.01.T01 | AT5G43270 | 41.250 | 80 | 42 | 1 | 28 | 102 | 130 | 209 | 5.51e-12 | 61.6 |
| MsG0480022359.01.T01 | AT5G43270 | 41.250 | 80 | 42 | 1 | 28 | 102 | 130 | 209 | 5.51e-12 | 61.6 |
| MsG0480022359.01.T01 | AT5G43270 | 41.250 | 80 | 42 | 1 | 28 | 102 | 130 | 209 | 5.51e-12 | 61.6 |
| MsG0480022359.01.T01 | AT3G15270 | 58.537 | 41 | 17 | 0 | 62 | 102 | 63 | 103 | 6.46e-12 | 59.7 |
| MsG0480022359.01.T01 | AT1G69170 | 50.000 | 56 | 25 | 1 | 50 | 102 | 109 | 164 | 9.40e-12 | 60.8 |
| MsG0480022359.01.T01 | AT5G50670 | 48.936 | 47 | 24 | 0 | 56 | 102 | 95 | 141 | 4.37e-11 | 58.9 |
| MsG0480022359.01.T01 | AT5G50670 | 48.936 | 47 | 24 | 0 | 56 | 102 | 95 | 141 | 4.37e-11 | 58.9 |
| MsG0480022359.01.T01 | AT5G50570 | 48.936 | 47 | 24 | 0 | 56 | 102 | 95 | 141 | 4.37e-11 | 58.9 |
| MsG0480022359.01.T01 | AT5G50570 | 48.936 | 47 | 24 | 0 | 56 | 102 | 95 | 141 | 4.37e-11 | 58.9 |
| MsG0480022359.01.T01 | AT1G20980 | 52.830 | 53 | 24 | 1 | 60 | 112 | 118 | 169 | 4.62e-11 | 58.9 |
Find 26 sgRNAs with CRISPR-Local
Find 34 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAGGAAGAGGATGGTAGA+AGG | 0.346008 | 4:-71556797 | MsG0480022359.01.T01:CDS |
| TGAGGAGGAAGAAGAGGAAG+AGG | 0.391649 | 4:-71556832 | MsG0480022359.01.T01:CDS |
| GCACCTGCCGTACACATTAC+AGG | 0.392224 | 4:-71556618 | MsG0480022359.01.T01:CDS |
| GGAAGAAGAGGAAGAGGATA+CGG | 0.438830 | 4:-71556826 | MsG0480022359.01.T01:CDS |
| AAGAGGATGGTAGAAGGAAG+AGG | 0.452598 | 4:-71556791 | MsG0480022359.01.T01:CDS |
| ATGTGAAATATTCTTGTTGA+GGG | 0.453314 | 4:-71556469 | MsG0480022359.01.T01:CDS |
| GCAATATCACCGGAGGCATA+AGG | 0.462023 | 4:-71556661 | MsG0480022359.01.T01:CDS |
| GGATCATGAGGAGGAAGAAG+AGG | 0.499097 | 4:-71556838 | MsG0480022359.01.T01:CDS |
| AGAGGATGGTAGAAGGAAGA+GGG | 0.504666 | 4:-71556790 | MsG0480022359.01.T01:CDS |
| AATGTGTACGGCAGGTGCTT+TGG | 0.505419 | 4:+71556623 | None:intergenic |
| ACATTACAGGATTGCAGCAA+AGG | 0.512816 | 4:-71556605 | MsG0480022359.01.T01:intron |
| TATTCCACCTTGTTGTCAAG+TGG | 0.526109 | 4:-71556715 | MsG0480022359.01.T01:CDS |
| TTGAAACTATGGAGCCAAGA+AGG | 0.558429 | 4:-71556893 | None:intergenic |
| ACTCACAGACCTTATGCCTC+CGG | 0.564755 | 4:+71556652 | None:intergenic |
| CAATTCTCCACTTGACAACA+AGG | 0.571704 | 4:+71556708 | None:intergenic |
| AATAAGTTTGAAGTACAAAG+AGG | 0.596272 | 4:-71556859 | MsG0480022359.01.T01:CDS |
| GATGTGAAATATTCTTGTTG+AGG | 0.596883 | 4:-71556470 | MsG0480022359.01.T01:CDS |
| CTGCAATCCTGTAATGTGTA+CGG | 0.600361 | 4:+71556611 | None:intergenic |
| TATGGAGCCAAGAAGGTCAG+AGG | 0.627805 | 4:-71556886 | MsG0480022359.01.T01:CDS |
| AATCCTGTAATGTGTACGGC+AGG | 0.629458 | 4:+71556615 | None:intergenic |
| ATGGAGCCAAGAAGGTCAGA+GGG | 0.629985 | 4:-71556885 | MsG0480022359.01.T01:CDS |
| GTACAAAGAGGATCATGAGG+AGG | 0.636625 | 4:-71556847 | MsG0480022359.01.T01:CDS |
| GTGAAGCTAAGCAATATCAC+CGG | 0.638561 | 4:-71556671 | MsG0480022359.01.T01:CDS |
| GAAGTACAAAGAGGATCATG+AGG | 0.643502 | 4:-71556850 | MsG0480022359.01.T01:CDS |
| AAGCTAAGCAATATCACCGG+AGG | 0.689023 | 4:-71556668 | MsG0480022359.01.T01:CDS |
| TTCTCCACTTGACAACAAGG+TGG | 0.724295 | 4:+71556711 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTACTTAAAAGAGATT+AGG | + | Chr4:71556781-71556800 | None:intergenic | 15.0% |
| !! | AATTTACTTAAAAGAGATTA+GGG | + | Chr4:71556780-71556799 | None:intergenic | 15.0% |
| ! | ATGTGAAATATTCTTGTTGA+GGG | - | Chr4:71556856-71556875 | MsG0480022359.01.T01:CDS | 25.0% |
| !! | AATAAGTTTGAAGTACAAAG+AGG | - | Chr4:71556466-71556485 | MsG0480022359.01.T01:CDS | 25.0% |
| GATGTGAAATATTCTTGTTG+AGG | - | Chr4:71556855-71556874 | MsG0480022359.01.T01:CDS | 30.0% | |
| AAGAGAAGTTCCAAAAAAGC+TGG | - | Chr4:71556578-71556597 | MsG0480022359.01.T01:intron | 35.0% | |
| !!! | ATTTGAGCTTCCAGCTTTTT+TGG | + | Chr4:71556591-71556610 | None:intergenic | 35.0% |
| ACATTACAGGATTGCAGCAA+AGG | - | Chr4:71556720-71556739 | MsG0480022359.01.T01:CDS | 40.0% | |
| CAATTCTCCACTTGACAACA+AGG | + | Chr4:71556620-71556639 | None:intergenic | 40.0% | |
| CTGCAATCCTGTAATGTGTA+CGG | + | Chr4:71556717-71556736 | None:intergenic | 40.0% | |
| GAAGTACAAAGAGGATCATG+AGG | - | Chr4:71556475-71556494 | MsG0480022359.01.T01:CDS | 40.0% | |
| GTGAAGCTAAGCAATATCAC+CGG | - | Chr4:71556654-71556673 | MsG0480022359.01.T01:CDS | 40.0% | |
| ! | ATTTTTCCCTCTGACCTTCT+TGG | + | Chr4:71556449-71556468 | None:intergenic | 40.0% |
| ! | TATTCCACCTTGTTGTCAAG+TGG | - | Chr4:71556610-71556629 | MsG0480022359.01.T01:CDS | 40.0% |
| !! | AGAGGATACGGATTTTGAAG+AGG | - | Chr4:71556511-71556530 | MsG0480022359.01.T01:intron | 40.0% |
| !! | GATTTTGAAGAGGAAGAGGA+TGG | - | Chr4:71556521-71556540 | MsG0480022359.01.T01:intron | 40.0% |
| !! | TACGGATTTTGAAGAGGAAG+AGG | - | Chr4:71556517-71556536 | MsG0480022359.01.T01:intron | 40.0% |
| AAGAGGAAGAGGATGGTAGA+AGG | - | Chr4:71556528-71556547 | MsG0480022359.01.T01:intron | 45.0% | |
| AAGAGGATGGTAGAAGGAAG+AGG | - | Chr4:71556534-71556553 | MsG0480022359.01.T01:intron | 45.0% | |
| AAGCTAAGCAATATCACCGG+AGG | - | Chr4:71556657-71556676 | MsG0480022359.01.T01:CDS | 45.0% | |
| AATCCTGTAATGTGTACGGC+AGG | + | Chr4:71556713-71556732 | None:intergenic | 45.0% | |
| AGAGGATGGTAGAAGGAAGA+GGG | - | Chr4:71556535-71556554 | MsG0480022359.01.T01:intron | 45.0% | |
| GGAAGAAGAGGAAGAGGATA+CGG | - | Chr4:71556499-71556518 | MsG0480022359.01.T01:intron | 45.0% | |
| GTACAAAGAGGATCATGAGG+AGG | - | Chr4:71556478-71556497 | MsG0480022359.01.T01:CDS | 45.0% | |
| TTCTCCACTTGACAACAAGG+TGG | + | Chr4:71556617-71556636 | None:intergenic | 45.0% | |
| !! | GGTTTTGTCAGCAATGTAGC+AGG | - | Chr4:71556741-71556760 | MsG0480022359.01.T01:CDS | 45.0% |
| !!! | TATATATTTTTGTTTAATTA+AGG | - | Chr4:71556819-71556838 | MsG0480022359.01.T01:CDS | 5.0% |
| AATGTGTACGGCAGGTGCTT+TGG | + | Chr4:71556705-71556724 | None:intergenic | 50.0% | |
| ACTCACAGACCTTATGCCTC+CGG | + | Chr4:71556676-71556695 | None:intergenic | 50.0% | |
| ATGGAGCCAAGAAGGTCAGA+GGG | - | Chr4:71556440-71556459 | MsG0480022359.01.T01:CDS | 50.0% | |
| GGATCATGAGGAGGAAGAAG+AGG | - | Chr4:71556487-71556506 | MsG0480022359.01.T01:CDS | 50.0% | |
| TGAGGAGGAAGAAGAGGAAG+AGG | - | Chr4:71556493-71556512 | MsG0480022359.01.T01:intron | 50.0% | |
| ! | GCAATATCACCGGAGGCATA+AGG | - | Chr4:71556664-71556683 | MsG0480022359.01.T01:CDS | 50.0% |
| GCACCTGCCGTACACATTAC+AGG | - | Chr4:71556707-71556726 | MsG0480022359.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 71556440 | 71556907 | 71556440 | ID=MsG0480022359.01;Name=MsG0480022359.01 |
| Chr4 | mRNA | 71556440 | 71556907 | 71556440 | ID=MsG0480022359.01.T01;Parent=MsG0480022359.01;Name=MsG0480022359.01.T01;_AED=0.50;_eAED=0.59;_QI=0|0|0|1|1|1|2|0|122 |
| Chr4 | exon | 71556606 | 71556907 | 71556606 | ID=MsG0480022359.01.T01:exon:4874;Parent=MsG0480022359.01.T01 |
| Chr4 | exon | 71556440 | 71556506 | 71556440 | ID=MsG0480022359.01.T01:exon:4873;Parent=MsG0480022359.01.T01 |
| Chr4 | CDS | 71556606 | 71556907 | 71556606 | ID=MsG0480022359.01.T01:cds;Parent=MsG0480022359.01.T01 |
| Chr4 | CDS | 71556440 | 71556506 | 71556440 | ID=MsG0480022359.01.T01:cds;Parent=MsG0480022359.01.T01 |
| Gene Sequence |
| Protein sequence |
