AlfalfaGEDB | MsG0480023431.01

M. sativa cultivar ZhongmuNo.1 / MsG0480023431.01

KEGG: K19040
GO: -
PFAM: PF13639

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023431.01.T01	XP_003630197.1	90.789	228	18	1	1	225	1	228	7.42E-143	408

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023431.01.T01	Q6NQG7	46.948	213	91	5	11	216	17	214	1.91E-60	192

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023431.01.T01	G7LD34	90.789	228	18	1	1	225	1	228	3.55e-143	408

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000367.01	MsG0480023431.01	0.823236	1.543798e-53	1.321689e-50
MsG0180001515.01	MsG0480023431.01	0.802825	4.668319e-49	2.309632e-46
MsG0180002255.01	MsG0480023431.01	0.803988	2.680752e-49	1.366372e-46
MsG0180003375.01	MsG0480023431.01	0.802800	4.723410e-49	2.335289e-46
MsG0180004059.01	MsG0480023431.01	0.818372	2.028816e-52	1.516004e-49
MsG0180005353.01	MsG0480023431.01	0.803030	4.235233e-49	2.106058e-46
MsG0280006316.01	MsG0480023431.01	0.813690	2.253102e-51	1.481465e-48
MsG0280011267.01	MsG0480023431.01	0.803903	2.790848e-49	1.419414e-46
MsG0380013213.01	MsG0480023431.01	0.801923	7.161140e-49	3.462118e-46
MsG0380013226.01	MsG0480023431.01	0.812358	4.414409e-51	2.800807e-48
MsG0380014344.01	MsG0480023431.01	0.822458	2.343485e-53	1.962628e-50
MsG0480019301.01	MsG0480023431.01	0.806426	8.273466e-50	4.489238e-47
MsG0480019346.01	MsG0480023431.01	0.800753	1.243075e-48	5.834435e-46
MsG0480019666.01	MsG0480023431.01	0.810217	1.286540e-50	7.709683e-48
MsG0480020539.01	MsG0480023431.01	0.814471	1.515020e-51	1.017526e-48
MsG0480020814.01	MsG0480023431.01	0.810194	1.301061e-50	7.792095e-48
MsG0480021133.01	MsG0480023431.01	0.807069	6.052714e-50	3.338993e-47
MsG0480021604.01	MsG0480023431.01	0.802958	4.382466e-49	2.175323e-46
MsG0480023322.01	MsG0480023431.01	0.801790	7.624734e-49	3.673836e-46
MsG0480023429.01	MsG0480023431.01	0.855868	4.725455e-62	1.106678e-58
MsG0480023431.01	MsG0480023432.01	0.840763	7.147765e-58	1.028469e-54
MsG0480023431.01	MsG0580025524.01	0.804353	2.250195e-49	1.157679e-46
MsG0480023431.01	MsG0580025586.01	0.815577	8.607171e-52	5.956991e-49
MsG0480023431.01	MsG0580025961.01	0.825301	5.051338e-54	4.586368e-51
MsG0480023431.01	MsG0580027752.01	0.808800	2.592421e-50	1.496298e-47
MsG0480023431.01	MsG0680031200.01	0.803522	3.349175e-49	1.686755e-46
MsG0480023431.01	MsG0680034974.01	0.835339	1.776974e-56	2.166783e-53
MsG0480023431.01	MsG0680034978.01	0.814281	1.669087e-51	1.115196e-48
MsG0480023431.01	MsG0780036649.01	0.818943	1.505799e-52	1.143109e-49
MsG0480023431.01	MsG0780036839.01	0.809186	2.142444e-50	1.249536e-47
MsG0480023431.01	MsG0780038519.01	0.803126	4.045261e-49	2.016544e-46
MsG0480023431.01	MsG0780040497.01	0.803992	2.675043e-49	1.363617e-46
MsG0480023431.01	MsG0780040719.01	0.803483	3.412498e-49	1.716865e-46
MsG0480023431.01	MsG0880042122.01	0.804020	2.639425e-49	1.346402e-46
MsG0480023431.01	MsG0880043217.01	0.800897	1.161697e-48	5.472805e-46
MsG0480023431.01	MsG0880043530.01	0.827530	1.486705e-54	1.439059e-51
MsG0480023431.01	MsG0880046166.01	0.821220	4.533204e-53	3.665978e-50
MsG0480023431.01	MsG0880047406.01	-0.805147	1.535715e-49	8.064431e-47
MsG0380016299.01	MsG0480023431.01	0.810934	9.005679e-51	5.501315e-48
MsG0380016476.01	MsG0480023431.01	0.802394	5.729741e-49	2.803645e-46
MsG0280006575.01	MsG0480023431.01	0.818571	1.828261e-52	1.373517e-49
MsG0280007678.01	MsG0480023431.01	0.805801	1.119985e-49	5.981015e-47
MsG0280008659.01	MsG0480023431.01	0.813625	2.327980e-51	1.528030e-48
MsG0280010455.01	MsG0480023431.01	-0.802681	4.998879e-49	2.463875e-46
MsG0280010515.01	MsG0480023431.01	0.803705	3.068493e-49	1.552559e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023431.01.T01	MTR_8g092840	90.789	228	18	1	1	225	1	228	8.99e-147	408
MsG0480023431.01.T01	MTR_8g092960	89.333	225	17	1	1	225	1	218	1.30e-139	390
MsG0480023431.01.T01	MTR_8g092970	78.829	222	41	1	1	222	1	216	5.33e-119	337
MsG0480023431.01.T01	MTR_8g093010	76.652	227	39	5	1	222	1	218	2.43e-118	336
MsG0480023431.01.T01	MTR_8g092930	76.889	225	48	2	1	222	1	224	1.35e-115	329
MsG0480023431.01.T01	MTR_8g092985	79.048	210	43	1	1	209	1	210	1.41e-111	318
MsG0480023431.01.T01	MTR_8g092990	76.549	226	49	2	1	222	1	226	2.16e-107	308
MsG0480023431.01.T01	MTR_3g095560	60.088	228	83	4	1	222	1	226	8.74e-92	270
MsG0480023431.01.T01	MTR_3g094000	51.880	133	61	2	53	184	36	166	2.44e-41	139
MsG0480023431.01.T01	MTR_7g073200	44.755	143	74	3	42	183	15	153	1.04e-39	135
MsG0480023431.01.T01	MTR_5g024730	48.175	137	64	4	54	188	26	157	3.44e-36	127
MsG0480023431.01.T01	MTR_3g116000	45.070	142	72	4	58	197	26	163	3.04e-34	121
MsG0480023431.01.T01	MTR_8g073120	47.287	129	58	4	54	179	19	140	6.95e-33	118
MsG0480023431.01.T01	MTR_2g035800	39.073	151	83	3	30	180	4	145	9.24e-32	114
MsG0480023431.01.T01	MTR_4g094725	38.255	149	81	3	33	180	11	149	2.81e-29	107
MsG0480023431.01.T01	MTR_1g100737	44.792	96	49	1	95	186	77	172	6.81e-20	84.3
MsG0480023431.01.T01	MTR_8g023400	46.835	79	39	2	110	187	92	168	1.24e-19	85.9
MsG0480023431.01.T01	MTR_6g055030	38.793	116	65	2	66	179	57	168	1.71e-19	85.5
MsG0480023431.01.T01	MTR_1g082550	33.333	150	84	4	42	183	32	173	4.20e-19	85.1
MsG0480023431.01.T01	MTR_3g110190	46.154	78	41	1	108	185	64	140	5.67e-19	84.3
MsG0480023431.01.T01	MTR_7g113800	34.667	150	77	8	44	183	28	166	1.75e-18	83.2
MsG0480023431.01.T01	MTR_4g120270	43.056	72	38	1	108	179	78	146	4.29e-18	80.9
MsG0480023431.01.T01	MTR_7g117540	56.140	57	25	0	129	185	93	149	1.29e-17	79.7
MsG0480023431.01.T01	MTR_4g063070	43.210	81	45	1	100	179	298	378	1.51e-17	80.9
MsG0480023431.01.T01	MTR_1g043410	25.974	154	94	3	39	180	21	166	1.65e-17	80.1
MsG0480023431.01.T01	MTR_3g071300	31.538	130	86	1	56	182	22	151	2.99e-17	76.6
MsG0480023431.01.T01	MTR_1g492830	29.747	158	95	3	61	218	22	163	3.03e-17	77.8
MsG0480023431.01.T01	MTR_6g087150	32.468	154	91	3	30	180	19	162	3.35e-17	79.7
MsG0480023431.01.T01	MTR_5g082940	44.318	88	46	2	96	182	63	148	6.13e-17	75.9
MsG0480023431.01.T01	MTR_7g116220	39.744	78	45	1	109	184	69	146	6.47e-17	75.9
MsG0480023431.01.T01	MTR_3g078450	33.588	131	80	3	91	220	57	181	1.16e-16	76.3
MsG0480023431.01.T01	MTR_2g096350	58.333	48	20	0	132	179	130	177	1.33e-16	75.9
MsG0480023431.01.T01	MTR_3g099650	42.308	78	43	1	108	183	105	182	1.34e-16	77.8
MsG0480023431.01.T01	MTR_5g071930	48.684	76	35	2	109	184	65	136	2.45e-16	74.7
MsG0480023431.01.T01	MTR_4g056590	41.026	78	41	2	109	186	99	171	2.96e-16	74.3
MsG0480023431.01.T01	MTR_5g064980	36.364	99	58	2	86	182	87	182	2.98e-16	77.0
MsG0480023431.01.T01	MTR_3g078470	31.452	124	83	2	61	182	26	149	4.31e-16	74.7
MsG0480023431.01.T01	MTR_3g464780	42.308	78	42	1	109	183	101	178	4.51e-16	75.1
MsG0480023431.01.T01	MTR_4g129420	41.772	79	46	0	105	183	112	190	5.53e-16	76.6
MsG0480023431.01.T01	MTR_7g076250	40.278	72	43	0	108	179	61	132	1.03e-15	72.8
MsG0480023431.01.T01	MTR_2g055790	35.780	109	63	2	78	183	42	146	1.61e-15	72.4
MsG0480023431.01.T01	MTR_3g100400	43.056	72	40	1	108	179	128	198	1.73e-15	75.1
MsG0480023431.01.T01	MTR_4g030070	34.091	88	56	1	100	187	75	160	2.23e-15	72.8
MsG0480023431.01.T01	MTR_2g436100	37.500	80	49	1	100	179	83	161	2.25e-15	73.6
MsG0480023431.01.T01	MTR_5g026730	29.008	131	89	2	53	179	6	136	3.25e-15	71.2
MsG0480023431.01.T01	MTR_8g066780	35.398	113	64	3	105	216	109	213	6.69e-15	72.8
MsG0480023431.01.T01	MTR_4g093830	41.429	70	40	1	110	179	126	194	7.97e-15	72.8
MsG0480023431.01.T01	MTR_3g012550	27.692	130	92	2	52	179	21	150	9.68e-15	70.1
MsG0480023431.01.T01	MTR_5g030010	36.709	79	49	1	105	183	117	194	1.32e-14	72.4
MsG0480023431.01.T01	MTR_1g070140	38.462	78	46	2	103	179	96	172	1.37e-14	72.0
MsG0480023431.01.T01	MTR_7g116180	37.179	78	47	1	107	182	64	141	1.55e-14	69.3
MsG0480023431.01.T01	MTR_5g092790	42.683	82	44	2	100	179	147	227	2.04e-14	70.5
MsG0480023431.01.T01	MTR_8g089880	35.000	80	51	1	110	189	127	205	2.21e-14	70.9
MsG0480023431.01.T01	MTR_3g114500	30.769	117	77	2	63	179	1	113	2.28e-14	67.8
MsG0480023431.01.T01	MTR_1g070425	37.179	78	47	1	107	182	65	142	2.56e-14	68.9
MsG0480023431.01.T01	MTR_5g066250	40.278	72	42	1	108	179	132	202	2.69e-14	71.6
MsG0480023431.01.T01	MTR_1g056350	39.726	73	40	2	110	179	74	145	3.18e-14	68.6
MsG0480023431.01.T01	MTR_7g108855	34.259	108	61	3	97	195	53	159	3.32e-14	68.9
MsG0480023431.01.T01	MTR_3g091620	41.892	74	42	1	110	183	101	173	4.37e-14	70.5
MsG0480023431.01.T01	MTR_5g064890	35.897	78	49	1	106	183	124	200	4.77e-14	70.5
MsG0480023431.01.T01	MTR_8g074900	33.333	123	68	2	69	182	108	225	5.58e-14	68.9
MsG0480023431.01.T01	MTR_5g064990	38.462	78	46	1	108	183	112	189	6.03e-14	70.5
MsG0480023431.01.T01	MTR_2g090905	41.558	77	40	1	108	179	37	113	6.38e-14	66.6
MsG0480023431.01.T01	MTR_2g009310	55.556	45	20	0	135	179	159	203	6.85e-14	70.1
MsG0480023431.01.T01	MTR_1g074190	33.333	90	55	1	103	187	92	181	7.16e-14	70.1
MsG0480023431.01.T01	MTR_3g086700	31.356	118	74	2	72	182	3	120	7.92e-14	67.8
MsG0480023431.01.T01	MTR_2g090950	39.744	78	42	1	107	179	88	165	8.43e-14	68.6
MsG0480023431.01.T01	MTR_6g007670	41.096	73	41	1	107	179	5	75	8.97e-14	68.9
MsG0480023431.01.T01	MTR_6g007670	42.254	71	41	0	109	179	144	214	1.81e-11	62.4
MsG0480023431.01.T01	MTR_5g009190	37.805	82	50	1	100	180	256	337	9.20e-14	69.7
MsG0480023431.01.T01	MTR_5g009210	38.272	81	49	1	100	179	277	357	9.47e-14	69.7
MsG0480023431.01.T01	MTR_5g026720	53.333	45	21	0	135	179	91	135	1.01e-13	67.0
MsG0480023431.01.T01	MTR_2g041200	34.109	129	64	3	61	179	34	151	1.14e-13	67.0
MsG0480023431.01.T01	MTR_5g022920	38.961	77	46	1	107	182	158	234	1.28e-13	68.2
MsG0480023431.01.T01	MTR_6g007737	30.370	135	80	3	61	182	71	204	1.55e-13	69.3
MsG0480023431.01.T01	MTR_4g108830	32.979	94	61	1	87	180	98	189	1.57e-13	67.0
MsG0480023431.01.T01	MTR_4g108830	32.979	94	61	1	87	180	126	217	1.58e-13	67.4
MsG0480023431.01.T01	MTR_5g034790	38.961	77	46	1	106	182	112	187	1.59e-13	68.9
MsG0480023431.01.T01	MTR_4g106680	37.838	74	45	1	106	179	102	174	1.98e-13	68.6
MsG0480023431.01.T01	MTR_1g026070	29.060	117	79	1	63	179	1	113	2.21e-13	65.1
MsG0480023431.01.T01	MTR_5g076990	30.147	136	85	3	54	179	13	148	2.33e-13	68.2
MsG0480023431.01.T01	MTR_8g028465	36.620	71	42	1	110	180	90	157	2.79e-13	66.6
MsG0480023431.01.T01	MTR_7g059360	43.478	69	38	1	113	180	133	201	2.85e-13	67.0
MsG0480023431.01.T01	MTR_3g086730	31.356	118	74	2	72	182	3	120	2.92e-13	67.0
MsG0480023431.01.T01	MTR_5g092750	42.683	82	44	2	100	179	147	227	2.93e-13	67.0
MsG0480023431.01.T01	MTR_7g079290	42.623	61	35	0	134	194	152	212	3.00e-13	66.6
MsG0480023431.01.T01	MTR_3g091200	27.485	171	103	5	18	179	215	373	3.21e-13	68.2
MsG0480023431.01.T01	MTR_8g063660	37.975	79	48	1	106	184	64	141	3.82e-13	67.8
MsG0480023431.01.T01	MTR_8g099495	37.179	78	48	1	104	180	313	390	5.15e-13	67.8
MsG0480023431.01.T01	MTR_6g007680	39.726	73	43	1	107	179	37	108	5.58e-13	64.7
MsG0480023431.01.T01	MTR_5g009200	37.037	81	50	1	100	179	312	392	9.31e-13	67.0
MsG0480023431.01.T01	MTR_3g078120	27.132	129	80	2	63	179	1	127	1.00e-12	63.9
MsG0480023431.01.T01	MTR_8g071815	55.814	43	19	0	137	179	90	132	1.20e-12	64.3
MsG0480023431.01.T01	MTR_7g116200	38.356	73	43	1	107	179	65	135	3.80e-12	62.8
MsG0480023431.01.T01	MTR_4g022410	34.951	103	62	2	93	195	74	171	4.75e-12	62.8
MsG0480023431.01.T01	MTR_8g032690	46.154	52	28	0	137	188	19	70	5.57e-12	60.8
MsG0480023431.01.T01	MTR_3g087900	46.154	65	30	3	120	183	55	115	9.00e-12	61.6
MsG0480023431.01.T01	MTR_7g079280	33.766	77	50	1	110	185	80	156	1.07e-11	61.6
MsG0480023431.01.T01	MTR_2g079320	35.484	93	55	2	95	182	112	204	1.08e-11	62.4
MsG0480023431.01.T01	MTR_6g055030	56.098	41	18	0	139	179	97	137	1.13e-11	63.2
MsG0480023431.01.T01	MTR_8g066740	29.688	128	80	3	62	179	21	148	1.14e-11	63.5
MsG0480023431.01.T01	MTR_8g019710	55.556	45	20	0	135	179	52	96	1.22e-11	60.8
MsG0480023431.01.T01	MTR_3g081030	32.292	96	61	2	100	195	86	177	1.66e-11	62.0
MsG0480023431.01.T01	MTR_8g099515	39.437	71	42	1	110	179	309	379	2.14e-11	63.2
MsG0480023431.01.T01	MTR_8g027745	35.211	71	45	1	110	179	286	356	4.07e-11	62.0
MsG0480023431.01.T01	MTR_7g096690	25.000	132	83	4	61	179	14	142	4.54e-11	61.6
MsG0480023431.01.T01	MTR_7g117350	26.016	123	83	2	63	180	246	365	5.19e-11	61.6
MsG0480023431.01.T01	MTR_7g117350	26.016	123	83	2	63	180	238	357	5.30e-11	61.6
MsG0480023431.01.T01	MTR_7g116210	36.986	73	44	1	107	179	7	77	5.33e-11	58.5
MsG0480023431.01.T01	MTR_1g096780	34.043	94	54	3	110	202	208	294	6.85e-11	61.6
MsG0480023431.01.T01	MTR_8g027980	34.667	75	47	1	113	185	93	167	8.67e-11	60.5
MsG0480023431.01.T01	MTR_8g009190	48.980	49	25	0	135	183	103	151	9.50e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480023431.01.T01	AT1G49230	46.948	213	91	5	11	216	17	214	1.94e-61	192
MsG0480023431.01.T01	AT1G49210	46.009	213	96	4	21	224	23	225	2.00e-59	187
MsG0480023431.01.T01	AT1G49220	50.000	180	70	4	21	192	23	190	1.00e-58	186
MsG0480023431.01.T01	AT1G49200	45.070	213	98	4	21	224	24	226	1.34e-58	185
MsG0480023431.01.T01	AT3G18773	44.737	228	102	8	6	224	8	220	3.24e-55	176
MsG0480023431.01.T01	AT5G05280	51.515	132	52	3	57	184	37	160	1.00e-41	140
MsG0480023431.01.T01	AT3G10910	48.649	148	61	4	57	198	29	167	2.26e-41	139
MsG0480023431.01.T01	AT1G76410	44.138	145	81	0	41	185	8	152	5.62e-38	130
MsG0480023431.01.T01	AT1G20823	41.566	166	81	4	23	183	3	157	8.42e-37	128
MsG0480023431.01.T01	AT2G17450	43.511	131	60	2	58	182	25	147	8.91e-31	112
MsG0480023431.01.T01	AT5G01880	40.217	184	83	6	12	193	1	159	2.53e-30	110
MsG0480023431.01.T01	AT5G47610	33.758	157	95	2	23	179	2	149	2.20e-27	103
MsG0480023431.01.T01	AT4G35480	38.571	140	69	3	58	183	23	159	5.05e-27	103
MsG0480023431.01.T01	AT4G17245	36.154	130	71	3	51	179	27	145	2.69e-24	95.1
MsG0480023431.01.T01	AT4G09120	35.537	121	73	2	64	182	51	168	1.13e-19	86.3
MsG0480023431.01.T01	AT4G09110	35.537	121	73	2	64	182	51	168	2.64e-19	84.7
MsG0480023431.01.T01	AT1G23980	34.104	173	89	6	34	183	20	190	7.59e-19	84.3
MsG0480023431.01.T01	AT1G72310	47.436	78	39	1	106	183	98	173	1.12e-18	83.2
MsG0480023431.01.T01	AT1G53820	46.835	79	36	3	106	182	91	165	1.35e-18	82.8
MsG0480023431.01.T01	AT3G05200	30.168	179	105	3	48	206	36	214	2.12e-18	83.2
MsG0480023431.01.T01	AT2G27940	38.614	101	59	2	96	196	101	198	3.09e-18	80.9
MsG0480023431.01.T01	AT1G72200	30.769	156	85	5	61	209	62	201	5.53e-18	82.0
MsG0480023431.01.T01	AT3G14320	33.333	120	77	2	62	180	14	131	1.67e-17	78.2
MsG0480023431.01.T01	AT4G40070	32.432	148	92	4	64	206	49	193	1.77e-17	80.1
MsG0480023431.01.T01	AT1G22500	31.507	146	97	2	53	195	31	176	2.32e-17	80.1
MsG0480023431.01.T01	AT1G74410	39.130	92	55	1	91	182	131	221	3.64e-17	77.4
MsG0480023431.01.T01	AT2G25410	36.667	120	69	3	64	179	253	369	8.91e-17	78.6
MsG0480023431.01.T01	AT3G16720	37.500	96	57	2	99	194	83	175	9.62e-17	77.8
MsG0480023431.01.T01	AT1G35330	31.783	129	77	2	65	182	46	174	1.73e-16	77.4
MsG0480023431.01.T01	AT2G20030	47.143	70	36	1	110	179	98	166	2.48e-16	77.4
MsG0480023431.01.T01	AT5G57750	40.000	75	45	0	106	180	91	165	2.84e-16	75.1
MsG0480023431.01.T01	AT2G35000	32.576	132	78	3	62	183	51	181	3.05e-16	77.0
MsG0480023431.01.T01	AT2G18650	42.308	78	45	0	106	183	95	172	3.80e-16	77.0
MsG0480023431.01.T01	AT5G27420	38.384	99	53	3	93	184	74	171	4.63e-16	76.3
MsG0480023431.01.T01	AT1G04360	29.771	131	79	3	62	179	46	176	5.18e-16	76.3
MsG0480023431.01.T01	AT4G15975	35.052	97	61	1	86	182	27	121	6.26e-16	74.3
MsG0480023431.01.T01	AT4G30400	40.000	75	45	0	105	179	102	176	8.08e-16	76.3
MsG0480023431.01.T01	AT4G10160	31.429	140	86	4	50	183	8	143	8.83e-16	73.9
MsG0480023431.01.T01	AT2G46493	41.333	75	43	1	106	179	106	180	9.79e-16	72.8
MsG0480023431.01.T01	AT3G03550	57.143	49	21	0	135	183	157	205	1.38e-15	75.1
MsG0480023431.01.T01	AT5G17600	41.667	72	41	1	108	179	114	184	1.87e-15	74.7
MsG0480023431.01.T01	AT4G17905	48.485	66	32	1	114	179	134	197	1.93e-15	74.3
MsG0480023431.01.T01	AT4G28890	43.662	71	39	1	110	180	97	166	1.98e-15	74.7
MsG0480023431.01.T01	AT4G17905	46.154	78	38	2	102	179	150	223	1.99e-15	74.3
MsG0480023431.01.T01	AT1G28040	41.333	75	43	1	106	179	221	295	2.90e-15	73.6
MsG0480023431.01.T01	AT1G33480	32.673	101	65	2	110	210	75	172	2.95e-15	73.2
MsG0480023431.01.T01	AT2G46494	28.467	137	89	2	52	179	222	358	3.96e-15	73.6
MsG0480023431.01.T01	AT5G05810	43.056	72	40	1	108	179	118	188	5.39e-15	73.6
MsG0480023431.01.T01	AT5G66070	45.333	75	38	2	108	182	150	221	5.51e-15	71.6
MsG0480023431.01.T01	AT5G66070	45.333	75	38	2	108	182	150	221	5.51e-15	71.6
MsG0480023431.01.T01	AT5G06490	40.789	76	39	1	110	179	96	171	7.10e-15	70.9
MsG0480023431.01.T01	AT2G35910	40.789	76	44	1	110	185	121	195	7.47e-15	71.2
MsG0480023431.01.T01	AT4G09100	36.585	82	50	2	100	179	46	127	7.47e-15	69.3
MsG0480023431.01.T01	AT5G66070	45.333	75	38	2	108	182	174	245	9.85e-15	71.2
MsG0480023431.01.T01	AT3G48030	38.043	92	45	3	100	182	86	174	1.08e-14	71.6
MsG0480023431.01.T01	AT4G09130	42.105	76	42	1	109	182	90	165	1.59e-14	72.0
MsG0480023431.01.T01	AT4G10150	35.714	84	52	1	100	183	76	157	1.82e-14	70.5
MsG0480023431.01.T01	AT3G18930	36.207	116	57	5	110	214	120	229	1.85e-14	72.0
MsG0480023431.01.T01	AT3G18930	36.207	116	57	5	110	214	120	229	1.85e-14	72.0
MsG0480023431.01.T01	AT3G18930	36.207	116	57	5	110	214	120	229	1.85e-14	72.0
MsG0480023431.01.T01	AT3G48030	38.043	92	45	3	100	182	164	252	1.87e-14	71.6
MsG0480023431.01.T01	AT5G42200	39.189	74	44	1	106	179	74	146	2.61e-14	68.6
MsG0480023431.01.T01	AT5G07040	30.328	122	80	3	63	180	17	137	3.95e-14	68.2
MsG0480023431.01.T01	AT5G10380	37.500	80	47	2	105	183	104	181	7.20e-14	69.7
MsG0480023431.01.T01	AT2G34990	29.032	124	82	2	62	179	15	138	7.47e-14	69.7
MsG0480023431.01.T01	AT1G72220	40.000	70	41	1	110	179	151	219	7.49e-14	70.1
MsG0480023431.01.T01	AT2G34990	29.032	124	82	2	62	179	37	160	8.54e-14	69.7
MsG0480023431.01.T01	AT4G17920	28.788	132	84	3	61	182	24	155	9.95e-14	69.3
MsG0480023431.01.T01	AT2G35420	28.682	129	82	2	60	179	18	145	1.42e-13	68.2
MsG0480023431.01.T01	AT1G32361	32.759	116	75	2	108	223	128	240	1.56e-13	68.9
MsG0480023431.01.T01	AT5G43420	26.761	142	80	3	62	179	39	180	1.74e-13	68.9
MsG0480023431.01.T01	AT5G53110	39.437	71	42	1	110	179	302	372	1.74e-13	68.9
MsG0480023431.01.T01	AT4G35840	29.936	157	85	4	48	182	83	236	1.86e-13	67.8
MsG0480023431.01.T01	AT3G11110	28.667	150	96	2	34	179	7	149	1.87e-13	66.2
MsG0480023431.01.T01	AT3G62690	46.875	64	33	1	116	179	93	155	2.00e-13	67.8
MsG0480023431.01.T01	AT5G58580	34.343	99	63	1	85	183	88	184	4.11e-13	67.4
MsG0480023431.01.T01	AT4G33565	49.020	51	26	0	135	185	215	265	4.71e-13	67.8
MsG0480023431.01.T01	AT1G35630	39.796	98	57	2	113	209	209	305	7.46e-13	67.0
MsG0480023431.01.T01	AT2G47560	29.787	141	88	4	44	179	16	150	9.35e-13	65.5
MsG0480023431.01.T01	AT4G26400	45.588	68	29	2	112	179	223	282	1.13e-12	66.6
MsG0480023431.01.T01	AT4G26400	45.588	68	29	2	112	179	223	282	1.13e-12	66.6
MsG0480023431.01.T01	AT2G17730	59.091	44	18	0	137	180	196	239	1.17e-12	65.5
MsG0480023431.01.T01	AT2G46160	33.735	83	48	1	110	185	104	186	1.40e-12	65.1
MsG0480023431.01.T01	AT2G46160	33.735	83	48	1	110	185	104	186	1.40e-12	65.1
MsG0480023431.01.T01	AT2G46495	38.158	76	45	1	106	179	287	362	2.04e-12	65.9
MsG0480023431.01.T01	AT2G46495	38.158	76	45	1	106	179	259	334	2.18e-12	65.9
MsG0480023431.01.T01	AT5G40250	26.846	149	79	3	61	183	45	189	2.35e-12	65.9
MsG0480023431.01.T01	AT3G19140	34.314	102	64	2	80	180	23	122	2.38e-12	62.8
MsG0480023431.01.T01	AT2G18670	33.333	75	50	0	105	179	78	152	2.41e-12	63.5
MsG0480023431.01.T01	AT5G36001	57.447	47	20	0	134	180	261	307	3.79e-12	65.1
MsG0480023431.01.T01	AT5G56340	45.588	68	29	2	112	179	241	300	4.16e-12	65.1
MsG0480023431.01.T01	AT2G42360	34.667	75	49	0	105	179	76	150	1.10e-11	62.8
MsG0480023431.01.T01	AT3G20395	37.363	91	53	2	93	182	129	216	1.44e-11	62.4
MsG0480023431.01.T01	AT2G34000	25.397	126	90	2	59	180	9	134	1.73e-11	60.8
MsG0480023431.01.T01	AT3G61550	29.032	93	56	1	103	185	92	184	3.31e-11	61.2
MsG0480023431.01.T01	AT1G53010	50.000	50	25	0	136	185	129	178	3.62e-11	60.5
MsG0480023431.01.T01	AT2G42350	36.000	75	46	1	105	179	70	142	4.22e-11	60.8
MsG0480023431.01.T01	AT3G47990	52.000	50	23	1	130	179	171	219	5.62e-11	61.2
MsG0480023431.01.T01	AT3G47990	52.000	50	23	1	130	179	171	219	5.62e-11	61.2
MsG0480023431.01.T01	AT3G47990	52.000	50	23	1	130	179	171	219	5.62e-11	61.2
MsG0480023431.01.T01	AT3G47990	55.556	45	19	1	135	179	233	276	5.86e-11	61.6
MsG0480023431.01.T01	AT3G47990	52.000	50	23	1	130	179	212	260	6.03e-11	61.6
MsG0480023431.01.T01	AT5G46650	25.767	163	102	5	35	182	2	160	6.24e-11	61.2

Find 49 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTCAACTAACTCGTATTT+TGG	0.157335	4:-85137679	MsG0480023431.01.T01:CDS
ATTGATAATCAATTGGATTT+TGG	0.213343	4:+85137737	None:intergenic
TTTCTTCTTGATTCCTTTGT+TGG	0.230023	4:+85137495	None:intergenic
CAGTGCCGGAATCTATTATT+AGG	0.242669	4:-85137216	MsG0480023431.01.T01:CDS
TGGAAACCATGATTGCATTT+AGG	0.272632	4:+85137355	None:intergenic
GTTGATGATGGCTACGTTTA+GGG	0.291505	4:+85137561	None:intergenic
CGTTGATGATGGCTACGTTT+AGG	0.307492	4:+85137560	None:intergenic
TGAGTTGAAACTACCAAGTT+TGG	0.317109	4:-85137437	MsG0480023431.01.T01:CDS
GAGACTTGTCGAAAGATTGT+TGG	0.388982	4:-85137265	MsG0480023431.01.T01:CDS
CAGCAACTCTTCACCTCAAT+TGG	0.392775	4:-85137518	MsG0480023431.01.T01:CDS
TTGCATTAAACTCCATTGTA+AGG	0.407407	4:-85137588	MsG0480023431.01.T01:CDS
AAGGAGGCACTGTCTGCACT+TGG	0.408731	4:+85137288	None:intergenic
AGTTACATTCAAAAGCTTCA+TGG	0.410074	4:+85137179	None:intergenic
GTTGGTGATTGATAATCAAT+TGG	0.420758	4:+85137730	None:intergenic
TTGTGGTTGTGTGTGAGAAC+AGG	0.421574	4:+85137700	None:intergenic
GCCTCCTATGTTGCCAGTGC+CGG	0.430012	4:-85137230	MsG0480023431.01.T01:CDS
AGCAAATAATAGCACACAAT+AGG	0.430929	4:+85137614	None:intergenic
ATGTTCGTTGCATCGACAAA+TGG	0.447158	4:-85137333	MsG0480023431.01.T01:CDS
CTAATAATAGATTCCGGCAC+TGG	0.476860	4:+85137217	None:intergenic
GTGTGTGAGAACAGGGGAGC+TGG	0.495001	4:+85137708	None:intergenic
ATTCCTTTGTTGGCCAATTG+AGG	0.496903	4:+85137505	None:intergenic
TGAATCCTAATAATAGATTC+CGG	0.497786	4:+85137211	None:intergenic
AGGAGGCACTGTCTGCACTT+GGG	0.504991	4:+85137289	None:intergenic
ATACACTCTGCATCCAAACT+TGG	0.507255	4:+85137424	None:intergenic
GGAGGCACTGTCTGCACTTG+GGG	0.507612	4:+85137290	None:intergenic
GATTCCGGCACTGGCAACAT+AGG	0.508387	4:+85137226	None:intergenic
CGAAGAAGAGTCGTTGATGA+TGG	0.512398	4:+85137549	None:intergenic
AATACGAGTTAGTTGAATTG+TGG	0.518921	4:+85137683	None:intergenic
TGTCTCTCAGATTTCACAAA+GGG	0.531207	4:-85137397	MsG0480023431.01.T01:CDS
ACTTCTCCATGAGCTTCTTG+TGG	0.539026	4:-85137785	MsG0480023431.01.T01:CDS
TGTGGTTGTGTGTGAGAACA+GGG	0.540709	4:+85137701	None:intergenic
ATTTGTCGATGCAACGAACA+TGG	0.562919	4:+85137335	None:intergenic
GGCACTGGCAACATAGGAGG+CGG	0.574365	4:+85137232	None:intergenic
GAGATTCCACAAGAAGCTCA+TGG	0.584576	4:+85137779	None:intergenic
TCACCTCAATTGGCCAACAA+AGG	0.584640	4:-85137508	MsG0480023431.01.T01:CDS
TCCGGCACTGGCAACATAGG+AGG	0.592143	4:+85137229	None:intergenic
CAATCTTTCGACAAGTCTCA+AGG	0.597223	4:+85137269	None:intergenic
TCAAAAGCTTCATGGTCTAG+TGG	0.599238	4:+85137187	None:intergenic
ACAAGAAGCTCATGGAGAAG+TGG	0.600282	4:+85137787	None:intergenic
GTTTAGGGCACACCTTACAA+TGG	0.614051	4:+85137576	None:intergenic
TTCTTGTGGAATCTCACACA+AGG	0.651171	4:-85137771	MsG0480023431.01.T01:CDS
GTGAGAACAGGGGAGCTGGT+TGG	0.655380	4:+85137712	None:intergenic
AGCTCTCAAGACATTTCCCA+CGG	0.658312	4:-85137473	MsG0480023431.01.T01:CDS
TCAGTTGAGTAGTTCACCGT+GGG	0.659654	4:+85137457	None:intergenic
ATGTCTCTCAGATTTCACAA+AGG	0.686490	4:-85137398	MsG0480023431.01.T01:CDS
TTGTGGAATCTCACACAAGG+AGG	0.690860	4:-85137768	MsG0480023431.01.T01:CDS
CTCAGTTGAGTAGTTCACCG+TGG	0.697094	4:+85137456	None:intergenic
GTGGTTGTGTGTGAGAACAG+GGG	0.771294	4:+85137702	None:intergenic
TCTTTCGACAAGTCTCAAGG+AGG	0.776052	4:+85137272	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTGATAATCAATTGGATTT+TGG	+	Chr4:85137239-85137258	None:intergenic	20.0%
!	TGAATCCTAATAATAGATTC+CGG	+	Chr4:85137765-85137784	None:intergenic	25.0%
!!	AAGCTTTTGAATGTAACTAT+AGG	-	Chr4:85137799-85137818	MsG0480023431.01.T01:CDS	25.0%
!!	AATTCAACTAACTCGTATTT+TGG	-	Chr4:85137294-85137313	MsG0480023431.01.T01:CDS	25.0%
!!	AGCTTTTGAATGTAACTATA+GGG	-	Chr4:85137800-85137819	MsG0480023431.01.T01:CDS	25.0%
!!	ATTTTACCTAAATGCAATCA+TGG	-	Chr4:85137612-85137631	MsG0480023431.01.T01:CDS	25.0%
	AATACGAGTTAGTTGAATTG+TGG	+	Chr4:85137293-85137312	None:intergenic	30.0%
	AGCAAATAATAGCACACAAT+AGG	+	Chr4:85137362-85137381	None:intergenic	30.0%
	AGTTACATTCAAAAGCTTCA+TGG	+	Chr4:85137797-85137816	None:intergenic	30.0%
	TTGCATTAAACTCCATTGTA+AGG	-	Chr4:85137385-85137404	MsG0480023431.01.T01:CDS	30.0%
	TTTCTTCTTGATTCCTTTGT+TGG	+	Chr4:85137481-85137500	None:intergenic	30.0%
!!	GTTGGTGATTGATAATCAAT+TGG	+	Chr4:85137246-85137265	None:intergenic	30.0%
	ATGTCTCTCAGATTTCACAA+AGG	-	Chr4:85137575-85137594	MsG0480023431.01.T01:CDS	35.0%
	TGGAAACCATGATTGCATTT+AGG	+	Chr4:85137621-85137640	None:intergenic	35.0%
	TGTCTCTCAGATTTCACAAA+GGG	-	Chr4:85137576-85137595	MsG0480023431.01.T01:CDS	35.0%
!	TGAGTTGAAACTACCAAGTT+TGG	-	Chr4:85137536-85137555	MsG0480023431.01.T01:CDS	35.0%
	ATACACTCTGCATCCAAACT+TGG	+	Chr4:85137552-85137571	None:intergenic	40.0%
	ATTCCTTTGTTGGCCAATTG+AGG	+	Chr4:85137471-85137490	None:intergenic	40.0%
	ATTTGTCGATGCAACGAACA+TGG	+	Chr4:85137641-85137660	None:intergenic	40.0%
	CAATCTTTCGACAAGTCTCA+AGG	+	Chr4:85137707-85137726	None:intergenic	40.0%
	CTAATAATAGATTCCGGCAC+TGG	+	Chr4:85137759-85137778	None:intergenic	40.0%
	GAGACTTGTCGAAAGATTGT+TGG	-	Chr4:85137708-85137727	MsG0480023431.01.T01:CDS	40.0%
	TCAAAAGCTTCATGGTCTAG+TGG	+	Chr4:85137789-85137808	None:intergenic	40.0%
	TTCTTGTGGAATCTCACACA+AGG	-	Chr4:85137202-85137221	MsG0480023431.01.T01:CDS	40.0%
!	ATGTTCGTTGCATCGACAAA+TGG	-	Chr4:85137640-85137659	MsG0480023431.01.T01:CDS	40.0%
!	CAGTGCCGGAATCTATTATT+AGG	-	Chr4:85137757-85137776	MsG0480023431.01.T01:CDS	40.0%
!!	GTTGATGATGGCTACGTTTA+GGG	+	Chr4:85137415-85137434	None:intergenic	40.0%
	ACAAGAAGCTCATGGAGAAG+TGG	+	Chr4:85137189-85137208	None:intergenic	45.0%
	ACTTCTCCATGAGCTTCTTG+TGG	-	Chr4:85137188-85137207	MsG0480023431.01.T01:CDS	45.0%
	AGCTCTCAAGACATTTCCCA+CGG	-	Chr4:85137500-85137519	MsG0480023431.01.T01:CDS	45.0%
	CAGCAACTCTTCACCTCAAT+TGG	-	Chr4:85137455-85137474	MsG0480023431.01.T01:CDS	45.0%
	GAGATTCCACAAGAAGCTCA+TGG	+	Chr4:85137197-85137216	None:intergenic	45.0%
	TCACCTCAATTGGCCAACAA+AGG	-	Chr4:85137465-85137484	MsG0480023431.01.T01:CDS	45.0%
	TCAGTTGAGTAGTTCACCGT+GGG	+	Chr4:85137519-85137538	None:intergenic	45.0%
	TCTTTCGACAAGTCTCAAGG+AGG	+	Chr4:85137704-85137723	None:intergenic	45.0%
	TGTGGTTGTGTGTGAGAACA+GGG	+	Chr4:85137275-85137294	None:intergenic	45.0%
	TTGTGGAATCTCACACAAGG+AGG	-	Chr4:85137205-85137224	MsG0480023431.01.T01:CDS	45.0%
	TTGTGGTTGTGTGTGAGAAC+AGG	+	Chr4:85137276-85137295	None:intergenic	45.0%
!	CGAAGAAGAGTCGTTGATGA+TGG	+	Chr4:85137427-85137446	None:intergenic	45.0%
!	GTTTAGGGCACACCTTACAA+TGG	+	Chr4:85137400-85137419	None:intergenic	45.0%
!!	CGTTGATGATGGCTACGTTT+AGG	+	Chr4:85137416-85137435	None:intergenic	45.0%
	CTCAGTTGAGTAGTTCACCG+TGG	+	Chr4:85137520-85137539	None:intergenic	50.0%
	GTGGTTGTGTGTGAGAACAG+GGG	+	Chr4:85137274-85137293	None:intergenic	50.0%
!!	AAGGAGGCACTGTCTGCACT+TGG	+	Chr4:85137688-85137707	None:intergenic	55.0%
!!	AGGAGGCACTGTCTGCACTT+GGG	+	Chr4:85137687-85137706	None:intergenic	55.0%
!!	GATTCCGGCACTGGCAACAT+AGG	+	Chr4:85137750-85137769	None:intergenic	55.0%
	GCCTCCTATGTTGCCAGTGC+CGG	-	Chr4:85137743-85137762	MsG0480023431.01.T01:CDS	60.0%
	GTGAGAACAGGGGAGCTGGT+TGG	+	Chr4:85137264-85137283	None:intergenic	60.0%
	GTGTGTGAGAACAGGGGAGC+TGG	+	Chr4:85137268-85137287	None:intergenic	60.0%
!!	GGAGGCACTGTCTGCACTTG+GGG	+	Chr4:85137686-85137705	None:intergenic	60.0%
!!	GGCACTGGCAACATAGGAGG+CGG	+	Chr4:85137744-85137763	None:intergenic	60.0%
!!	TCCGGCACTGGCAACATAGG+AGG	+	Chr4:85137747-85137766	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	85137159	85137836	85137159	ID=MsG0480023431.01;Name=MsG0480023431.01
Chr4	mRNA	85137159	85137836	85137159	ID=MsG0480023431.01.T01;Parent=MsG0480023431.01;Name=MsG0480023431.01.T01;_AED=0.39;_eAED=0.39;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|225
Chr4	exon	85137159	85137836	85137159	ID=MsG0480023431.01.T01:exon:2826;Parent=MsG0480023431.01.T01
Chr4	CDS	85137159	85137836	85137159	ID=MsG0480023431.01.T01:cds;Parent=MsG0480023431.01.T01

Gene Sequence

>MsG0480023431.01.T01

ATGTATGCTTCTACTTCTTTTACTTCACCACTTCTCCATGAGCTTCTTGTGGAATCTCACACAAGGAGGCTACTCTTCCAAAATCCAATTGATTATCAATCACCAACCAGCTCCCCTGTTCTCACACACAACCACAATTCAACTAACTCGTATTTTGGTGCTCGTGAGTTTGAATCAAATGTTGTGATGATAGTTGCTGTCCTATTGTGTGCTATTATTTGCTCAATTGCATTAAACTCCATTGTAAGGTGTGCCCTAAACGTAGCCATCATCAACGACTCTTCTTCGAGTTCTAGCAGCAACTCTTCACCTCAATTGGCCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTTCCCACGGTGAACTACTCAACTGAGTTGAAACTACCAAGTTTGGATGCAGAGTGTATGATATGTCTCTCAGATTTCACAAAGGGTGAAAAAGTGCGCATTTTACCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAAGCACATTCATCATGCCCCAAGTGCAGACAGTGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATCAGAAGCACCGCCTCCTATGTTGCCAGTGCCGGAATCTATTATTAGGATTCAGCCACTAGACCATGAAGCTTTTGAATGTAACTATAGGGAAGAAAGCAGATAA

Protein sequence

>MsG0480023431.01.T01

MYASTSFTSPLLHELLVESHTRRLLFQNPIDYQSPTSSPVLTHNHNSTNSYFGAREFESNVVMIVAVLLCAIICSIALNSIVRCALNVAIINDSSSSSSSNSSPQLANKGIKKKALKTFPTVNYSTELKLPSLDAECMICLSDFTKGEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGSEAPPPMLPVPESIIRIQPLDHEAFECNYREESR*