AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007678.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007678.01.T02 MTR_2g029750 97.368 76 2 0 2 77 256 331 5.22e-46 151
MsG0280007678.01.T02 MTR_2g029740 89.610 77 8 0 1 77 255 331 8.00e-43 142
MsG0280007678.01.T02 MTR_2g028980 81.818 77 14 0 1 77 255 331 4.36e-38 130
MsG0280007678.01.T02 MTR_2g029830 76.923 78 18 0 1 78 186 263 1.52e-36 125
MsG0280007678.01.T02 MTR_2g029800 78.947 76 16 0 1 76 255 330 1.15e-35 124
MsG0280007678.01.T02 MTR_2g029830 76.923 78 18 0 1 78 254 331 3.00e-35 123
MsG0280007678.01.T02 MTR_2g029815 76.316 76 18 0 1 76 255 330 3.97e-34 120
MsG0280007678.01.T02 MTR_2g029820 75.000 76 19 0 1 76 255 330 5.39e-34 120
MsG0280007678.01.T02 MTR_2g029880 71.233 73 21 0 4 76 116 188 5.62e-32 111
MsG0280007678.01.T02 MTR_2g029860 70.513 78 23 0 1 78 255 332 1.16e-31 113
MsG0280007678.01.T02 MTR_2g029910 71.053 76 22 0 1 76 257 332 1.25e-31 113
MsG0280007678.01.T02 MTR_2g029560 65.385 78 27 0 1 78 250 327 7.54e-30 108
MsG0280007678.01.T02 MTR_2g029730 66.667 78 26 0 1 78 251 328 1.47e-27 102
MsG0280007678.01.T02 MTR_2g029850 64.103 78 28 0 1 78 255 332 4.77e-26 99.0
MsG0280007678.01.T02 MTR_7g093370 60.526 76 30 0 1 76 296 371 1.46e-23 92.4
MsG0280007678.01.T02 MTR_1g054205 59.211 76 31 0 1 76 251 326 1.66e-22 89.0
MsG0280007678.01.T02 MTR_3g094650 55.556 72 30 1 1 72 249 318 5.52e-17 73.9
MsG0280007678.01.T02 MTR_1g098320 45.455 77 40 1 1 77 51 125 6.12e-17 70.9
MsG0280007678.01.T02 MTR_5g074970 53.947 76 33 1 1 76 253 326 1.09e-16 73.2
MsG0280007678.01.T02 MTR_4g125940 48.718 78 38 1 1 76 252 329 2.74e-16 72.4
MsG0280007678.01.T02 MTR_4g125940 48.718 78 38 1 2 77 198 275 3.68e-16 71.2
MsG0280007678.01.T02 MTR_5g074760 48.718 78 40 0 1 78 246 323 5.82e-16 71.2
MsG0280007678.01.T02 MTR_3g466200 50.000 76 36 1 1 76 247 320 8.48e-16 70.9
MsG0280007678.01.T02 MTR_4g029190 48.684 76 37 1 1 76 267 340 1.25e-15 70.5
MsG0280007678.01.T02 MTR_5g083860 47.368 76 38 1 1 76 252 325 1.39e-15 70.5
MsG0280007678.01.T02 MTR_6g043280 44.737 76 40 1 1 76 259 332 1.49e-15 70.5
MsG0280007678.01.T02 MTR_2g040000 45.570 79 40 1 1 76 253 331 1.84e-15 70.1
MsG0280007678.01.T02 MTR_5g021060 44.737 76 41 1 1 76 256 330 1.86e-15 70.1
MsG0280007678.01.T02 MTR_4g074995 48.684 76 38 1 1 76 234 308 4.00e-15 68.9
MsG0280007678.01.T02 MTR_5g074740 48.052 77 40 0 1 77 246 322 4.07e-15 68.9
MsG0280007678.01.T02 MTR_4g083710 48.684 76 38 1 1 76 250 324 4.40e-15 68.9
MsG0280007678.01.T02 MTR_5g074710 48.052 77 40 0 1 77 246 322 5.40e-15 68.6
MsG0280007678.01.T02 MTR_2g084020 46.053 76 40 1 1 76 244 318 7.78e-15 68.2
MsG0280007678.01.T02 MTR_3g467600 46.053 76 41 0 1 76 249 324 8.03e-15 68.2
MsG0280007678.01.T02 MTR_7g072510 40.789 76 43 1 1 76 239 312 1.10e-14 67.8
MsG0280007678.01.T02 MTR_4g029170 47.368 76 38 1 1 76 248 321 1.93e-14 67.0
MsG0280007678.01.T02 MTR_3g466180 44.737 76 40 1 1 76 250 323 2.12e-14 67.0
MsG0280007678.01.T02 MTR_4g029180 47.368 76 38 1 1 76 248 321 2.51e-14 67.0
MsG0280007678.01.T02 MTR_3g094670 50.000 72 34 1 1 72 249 318 2.62e-14 66.6
MsG0280007678.01.T02 MTR_5g014100 46.753 77 40 1 1 76 255 331 3.93e-14 66.2
MsG0280007678.01.T02 MTR_7g086820 40.260 77 44 1 1 77 239 313 5.72e-14 65.9
MsG0280007678.01.T02 MTR_2g084000 44.737 76 41 1 1 76 245 319 1.04e-13 65.1
MsG0280007678.01.T02 MTR_6g043460 45.833 72 37 1 1 72 255 324 1.05e-13 65.1
MsG0280007678.01.T02 MTR_5g017860 46.053 76 39 1 1 76 253 326 1.86e-13 64.3
MsG0280007678.01.T02 MTR_5g074860 41.333 75 44 0 1 75 250 324 2.21e-13 64.3
MsG0280007678.01.T02 MTR_4g029200 46.053 76 39 1 1 76 265 338 2.22e-13 64.3
MsG0280007678.01.T02 MTR_6g043240 41.379 87 46 2 1 84 258 342 2.90e-13 63.9
MsG0280007678.01.T02 MTR_5g074860 40.789 76 45 0 1 76 211 286 3.53e-13 63.5
MsG0280007678.01.T02 MTR_2g084010 44.737 76 41 1 1 76 244 318 5.23e-13 63.2
MsG0280007678.01.T02 MTR_7g029030 43.421 76 41 1 1 76 247 320 5.82e-13 63.2
MsG0280007678.01.T02 MTR_8g076820 42.105 76 43 1 1 76 256 330 6.13e-13 63.2
MsG0280007678.01.T02 MTR_2g084080 42.105 76 42 1 1 76 244 317 7.69e-13 62.8
MsG0280007678.01.T02 MTR_1g115900 40.741 81 47 1 1 81 247 326 7.81e-13 62.8
MsG0280007678.01.T02 MTR_7g072480 46.053 76 39 1 1 76 243 316 7.81e-13 62.8
MsG0280007678.01.T02 MTR_2g084090 42.105 76 42 1 1 76 245 318 8.36e-13 62.8
MsG0280007678.01.T02 MTR_1g009750 39.474 76 44 1 1 76 255 328 1.07e-12 62.4
MsG0280007678.01.T02 MTR_3g094630 48.684 76 37 1 1 76 249 322 1.26e-12 62.0
MsG0280007678.01.T02 MTR_2g084110 42.105 76 42 1 1 76 244 317 1.51e-12 62.0
MsG0280007678.01.T02 MTR_5g074770 38.667 75 46 0 1 75 34 108 2.05e-12 58.5
MsG0280007678.01.T02 MTR_1g009750 39.474 76 44 1 1 76 238 311 2.06e-12 61.6
MsG0280007678.01.T02 MTR_1g077000 42.105 76 42 1 1 76 254 327 2.24e-12 61.6
MsG0280007678.01.T02 MTR_0155s0040 39.474 76 44 1 1 76 242 315 3.72e-12 60.8
MsG0280007678.01.T02 MTR_7g026990 42.105 76 42 1 2 77 250 323 5.24e-12 60.5
MsG0280007678.01.T02 MTR_3g072190 40.789 76 43 1 1 76 245 318 5.64e-12 60.5
MsG0280007678.01.T02 MTR_4g095450 46.667 75 34 2 1 73 251 321 6.58e-12 60.1
MsG0280007678.01.T02 MTR_7g107500 46.053 76 38 2 1 76 25 97 7.45e-12 56.6
MsG0280007678.01.T02 MTR_0286s0010 40.789 76 43 1 1 76 261 334 8.49e-12 59.7
MsG0280007678.01.T02 MTR_6g008075 40.789 76 43 1 1 76 261 334 8.49e-12 59.7
MsG0280007678.01.T02 MTR_3g105790 40.789 76 43 1 1 76 249 322 9.32e-12 59.7
MsG0280007678.01.T02 MTR_4g127670 42.105 76 42 1 1 76 250 323 1.05e-11 59.7
MsG0280007678.01.T02 MTR_1g038680 42.857 77 40 2 1 76 259 332 1.29e-11 59.3
MsG0280007678.01.T02 MTR_3g072190 40.789 76 43 1 1 76 178 251 1.57e-11 58.5
MsG0280007678.01.T02 MTR_5g017850 44.156 77 39 2 1 76 253 326 1.71e-11 58.9
MsG0280007678.01.T02 MTR_4g122640 44.156 77 40 2 1 76 262 336 1.77e-11 58.9
MsG0280007678.01.T02 MTR_3g092990 40.000 75 43 1 2 76 254 326 2.84e-11 58.2
MsG0280007678.01.T02 MTR_5g058120 44.444 72 38 1 1 72 86 155 3.88e-11 57.8
MsG0280007678.01.T02 MTR_3g092990 40.000 75 43 1 2 76 243 315 4.07e-11 57.8
MsG0280007678.01.T02 MTR_7g107520 46.053 76 38 2 1 76 248 320 4.27e-11 57.8
MsG0280007678.01.T02 MTR_3g105790 40.789 76 43 1 1 76 173 246 6.59e-11 57.0
MsG0280007678.01.T01 MTR_2g029750 95.294 85 4 0 1 85 247 331 5.15e-52 167
MsG0280007678.01.T01 MTR_2g029740 88.235 85 10 0 1 85 247 331 4.92e-48 156
MsG0280007678.01.T01 MTR_2g028980 81.176 85 16 0 1 85 247 331 2.72e-43 144
MsG0280007678.01.T01 MTR_2g029830 77.907 86 19 0 1 86 178 263 8.30e-43 141
MsG0280007678.01.T01 MTR_2g029800 79.762 84 17 0 1 84 247 330 2.13e-41 139
MsG0280007678.01.T01 MTR_2g029830 77.907 86 19 0 1 86 246 331 3.82e-41 139
MsG0280007678.01.T01 MTR_2g029815 77.381 84 19 0 1 84 247 330 4.96e-40 135
MsG0280007678.01.T01 MTR_2g029820 76.190 84 20 0 1 84 247 330 1.01e-39 135
MsG0280007678.01.T01 MTR_2g029860 69.767 86 26 0 1 86 247 332 2.37e-36 126
MsG0280007678.01.T01 MTR_2g029910 67.857 84 27 0 1 84 249 332 6.28e-34 120
MsG0280007678.01.T01 MTR_2g029560 62.791 86 32 0 1 86 242 327 3.46e-32 115
MsG0280007678.01.T01 MTR_2g029880 71.233 73 21 0 12 84 116 188 7.50e-32 111
MsG0280007678.01.T01 MTR_2g029730 63.953 86 31 0 1 86 243 328 3.62e-30 110
MsG0280007678.01.T01 MTR_2g029850 62.791 86 32 0 1 86 247 332 1.61e-29 108
MsG0280007678.01.T01 MTR_7g093370 58.333 84 35 0 1 84 288 371 1.16e-26 101
MsG0280007678.01.T01 MTR_1g054205 57.143 84 36 0 1 84 243 326 3.13e-25 96.7
MsG0280007678.01.T01 MTR_1g098320 45.679 81 42 1 5 85 47 125 1.07e-18 75.9
MsG0280007678.01.T01 MTR_3g094650 52.500 80 36 1 1 80 241 318 7.04e-18 77.0
MsG0280007678.01.T01 MTR_4g029190 47.619 84 42 1 1 84 259 340 1.37e-17 76.3
MsG0280007678.01.T01 MTR_2g040000 44.828 87 45 1 1 84 245 331 1.63e-17 75.9
MsG0280007678.01.T01 MTR_5g074970 51.190 84 39 1 1 84 245 326 2.22e-17 75.5
MsG0280007678.01.T01 MTR_5g074760 48.837 86 43 1 1 86 239 323 2.31e-17 75.5
MsG0280007678.01.T01 MTR_5g074740 49.412 85 42 1 1 85 239 322 2.89e-17 75.1
MsG0280007678.01.T01 MTR_4g125940 46.512 86 44 1 1 84 244 329 4.56e-17 74.7
MsG0280007678.01.T01 MTR_4g125940 45.977 87 45 1 1 85 189 275 6.56e-17 73.9
MsG0280007678.01.T01 MTR_5g021060 44.048 84 46 1 1 84 248 330 8.41e-17 73.9
MsG0280007678.01.T01 MTR_5g074710 48.235 85 43 1 1 85 239 322 9.56e-17 73.9
MsG0280007678.01.T01 MTR_4g083710 46.429 84 44 1 1 84 242 324 9.73e-17 73.9
MsG0280007678.01.T01 MTR_2g084000 45.238 84 45 1 1 84 237 319 1.04e-16 73.6
MsG0280007678.01.T01 MTR_5g083860 45.238 84 44 1 1 84 244 325 1.06e-16 73.6
MsG0280007678.01.T01 MTR_3g466200 47.619 84 42 1 1 84 239 320 1.07e-16 73.6
MsG0280007678.01.T01 MTR_2g084020 44.048 84 46 1 1 84 236 318 1.75e-16 73.2
MsG0280007678.01.T01 MTR_4g029170 46.429 84 43 1 1 84 240 321 4.05e-16 72.0
MsG0280007678.01.T01 MTR_6g043280 42.857 84 46 1 1 84 251 332 5.00e-16 72.0
MsG0280007678.01.T01 MTR_7g072510 40.476 84 48 1 1 84 231 312 6.38e-16 71.6
MsG0280007678.01.T01 MTR_4g074995 46.429 84 44 1 1 84 226 308 1.29e-15 70.5
MsG0280007678.01.T01 MTR_5g014100 44.706 85 46 1 1 84 247 331 1.54e-15 70.5
MsG0280007678.01.T01 MTR_3g467600 44.048 84 47 0 1 84 241 324 2.16e-15 70.1
MsG0280007678.01.T01 MTR_3g094670 47.500 80 40 1 1 80 241 318 2.80e-15 69.7
MsG0280007678.01.T01 MTR_1g009750 39.759 83 48 1 2 84 248 328 4.41e-15 69.3
MsG0280007678.01.T01 MTR_4g029180 45.238 84 44 1 1 84 240 321 4.42e-15 69.3
MsG0280007678.01.T01 MTR_5g017860 44.048 84 45 1 1 84 245 326 4.83e-15 69.3
MsG0280007678.01.T01 MTR_8g076820 41.667 84 48 1 1 84 248 330 5.28e-15 68.9
MsG0280007678.01.T01 MTR_4g029200 45.238 84 44 1 1 84 257 338 5.60e-15 68.9
MsG0280007678.01.T01 MTR_4g127670 43.373 83 45 1 2 84 243 323 5.63e-15 68.9
MsG0280007678.01.T01 MTR_4g087965 46.341 82 41 2 1 81 264 343 6.47e-15 68.9
MsG0280007678.01.T01 MTR_1g009750 39.759 83 48 1 2 84 231 311 8.61e-15 68.6
MsG0280007678.01.T01 MTR_4g095450 47.561 82 37 2 2 81 244 321 9.12e-15 68.6
MsG0280007678.01.T01 MTR_6g043460 43.750 80 43 1 1 80 247 324 1.05e-14 68.2
MsG0280007678.01.T01 MTR_7g072480 45.238 84 44 1 1 84 235 316 1.41e-14 67.8
MsG0280007678.01.T01 MTR_5g074860 40.000 80 48 0 5 84 207 286 1.61e-14 67.4
MsG0280007678.01.T01 MTR_6g043240 40.000 95 52 2 1 92 250 342 1.88e-14 67.8
MsG0280007678.01.T01 MTR_3g466180 42.857 84 46 1 1 84 242 323 2.27e-14 67.4
MsG0280007678.01.T01 MTR_5g074860 41.026 78 46 0 6 83 247 324 2.75e-14 67.0
MsG0280007678.01.T01 MTR_2g084090 40.476 84 48 1 1 84 237 318 2.96e-14 67.0
MsG0280007678.01.T01 MTR_2g084010 42.857 84 47 1 1 84 236 318 3.27e-14 67.0
MsG0280007678.01.T01 MTR_2g084080 40.476 84 48 1 1 84 236 317 6.64e-14 65.9
MsG0280007678.01.T01 MTR_2g437770 47.059 85 41 3 1 84 260 341 6.96e-14 65.9
MsG0280007678.01.T01 MTR_3g092990 39.759 83 48 1 2 84 246 326 9.01e-14 65.5
MsG0280007678.01.T01 MTR_5g074770 38.462 78 48 0 6 83 31 108 1.03e-13 62.0
MsG0280007678.01.T01 MTR_1g115900 39.560 91 52 2 1 89 237 326 1.07e-13 65.5
MsG0280007678.01.T01 MTR_3g094630 46.429 84 43 1 1 84 241 322 1.11e-13 65.5
MsG0280007678.01.T01 MTR_4g133800 43.023 86 46 2 1 85 251 334 1.83e-13 64.7
MsG0280007678.01.T01 MTR_3g092990 39.286 84 49 1 1 84 234 315 1.93e-13 64.7
MsG0280007678.01.T01 MTR_0286s0010 40.964 83 47 1 2 84 254 334 2.26e-13 64.7
MsG0280007678.01.T01 MTR_6g008075 40.964 83 47 1 2 84 254 334 2.26e-13 64.7
MsG0280007678.01.T01 MTR_2g084110 40.476 84 48 1 1 84 236 317 2.46e-13 64.3
MsG0280007678.01.T01 MTR_1g038680 41.176 85 46 2 1 84 251 332 2.91e-13 64.3
MsG0280007678.01.T01 MTR_1g077000 42.857 84 45 2 1 84 247 327 3.52e-13 63.9
MsG0280007678.01.T01 MTR_5g017850 42.353 85 45 2 1 84 245 326 3.65e-13 63.9
MsG0280007678.01.T01 MTR_3g072190 39.286 84 49 1 1 84 170 251 7.05e-13 62.8
MsG0280007678.01.T01 MTR_7g029030 40.476 84 48 1 1 84 239 320 7.17e-13 63.2
MsG0280007678.01.T01 MTR_5g016010 36.585 82 50 1 2 83 249 328 7.23e-13 63.2
MsG0280007678.01.T01 MTR_3g072190 39.286 84 49 1 1 84 237 318 8.51e-13 62.8
MsG0280007678.01.T01 MTR_7g086820 39.744 78 45 1 9 86 239 314 9.01e-13 62.8
MsG0280007678.01.T01 MTR_7g107520 44.578 83 43 2 2 84 241 320 1.67e-12 62.0
MsG0280007678.01.T01 MTR_7g107500 43.902 82 43 2 3 84 19 97 2.06e-12 58.5
MsG0280007678.01.T01 MTR_4g122640 42.353 85 46 2 1 84 254 336 2.14e-12 62.0
MsG0280007678.01.T01 MTR_5g058120 43.750 80 43 1 1 80 78 155 2.61e-12 61.2
MsG0280007678.01.T01 MTR_3g105790 39.759 83 48 1 2 84 242 322 2.92e-12 61.6
MsG0280007678.01.T01 MTR_5g049280 40.000 85 49 2 2 84 253 337 4.50e-12 60.8
MsG0280007678.01.T01 MTR_1g090760 39.286 84 49 1 2 85 250 331 5.22e-12 60.8
MsG0280007678.01.T01 MTR_1g086490 36.905 84 51 1 1 84 259 340 5.64e-12 60.8
MsG0280007678.01.T01 MTR_7g026990 42.105 76 42 1 10 85 250 323 9.09e-12 60.1
MsG0280007678.01.T01 MTR_3g105790 39.286 84 49 1 1 84 165 246 1.31e-11 59.3
MsG0280007678.01.T01 MTR_2g008710 40.909 88 46 2 1 84 240 325 2.18e-11 58.9
MsG0280007678.01.T01 MTR_1g086320 35.714 84 52 2 1 84 252 333 2.29e-11 58.9
MsG0280007678.01.T01 MTR_0155s0040 40.000 75 43 1 10 84 243 315 2.83e-11 58.5
MsG0280007678.01.T01 MTR_3g462850 38.824 85 50 2 2 84 65 149 9.32e-11 55.5
MsG0280007678.01.T03 MTR_2g029750 96.923 65 2 0 1 65 267 331 2.25e-37 128
MsG0280007678.01.T03 MTR_2g029740 89.231 65 7 0 1 65 267 331 3.70e-34 119
MsG0280007678.01.T03 MTR_2g028980 81.538 65 12 0 1 65 267 331 1.12e-30 110
MsG0280007678.01.T03 MTR_2g029830 77.273 66 15 0 1 66 198 263 1.50e-29 106
MsG0280007678.01.T03 MTR_2g029880 75.000 64 16 0 1 64 125 188 1.73e-28 102
MsG0280007678.01.T03 MTR_2g029830 77.273 66 15 0 1 66 266 331 2.11e-28 104
MsG0280007678.01.T03 MTR_2g029800 78.125 64 14 0 1 64 267 330 1.82e-27 102
MsG0280007678.01.T03 MTR_2g029815 76.562 64 15 0 1 64 267 330 2.48e-27 101
MsG0280007678.01.T03 MTR_2g029820 75.000 64 16 0 1 64 267 330 3.79e-27 101
MsG0280007678.01.T03 MTR_2g029860 73.846 65 17 0 2 66 268 332 1.69e-26 99.8
MsG0280007678.01.T03 MTR_2g029910 74.603 63 16 0 2 64 270 332 6.58e-26 97.8
MsG0280007678.01.T03 MTR_2g029560 69.697 66 20 0 1 66 262 327 1.63e-25 96.7
MsG0280007678.01.T03 MTR_2g029730 70.769 65 19 0 2 66 264 328 3.50e-23 90.5
MsG0280007678.01.T03 MTR_2g029850 68.182 66 21 0 1 66 267 332 1.93e-22 88.6
MsG0280007678.01.T03 MTR_7g093370 64.062 64 23 0 1 64 308 371 2.28e-20 83.2
MsG0280007678.01.T03 MTR_1g054205 61.905 63 24 0 2 64 264 326 2.09e-18 77.4
MsG0280007678.01.T03 MTR_1g098320 47.692 65 32 1 1 65 63 125 2.42e-14 63.9
MsG0280007678.01.T03 MTR_3g094650 58.333 60 23 1 1 60 261 318 4.01e-14 65.9
MsG0280007678.01.T03 MTR_5g074970 54.688 64 27 1 1 64 265 326 2.20e-13 63.5
MsG0280007678.01.T03 MTR_6g043280 46.875 64 32 1 1 64 271 332 4.72e-13 62.8
MsG0280007678.01.T03 MTR_5g074760 50.000 66 33 0 1 66 258 323 5.30e-13 62.8
MsG0280007678.01.T03 MTR_4g125940 50.000 66 31 1 1 64 209 274 5.32e-13 62.4
MsG0280007678.01.T03 MTR_4g125940 50.000 66 31 1 1 64 264 329 6.74e-13 62.4
MsG0280007678.01.T03 MTR_5g083860 50.000 64 30 1 1 64 264 325 1.52e-12 61.2
MsG0280007678.01.T03 MTR_5g074740 49.231 65 33 0 1 65 258 322 2.13e-12 60.8
MsG0280007678.01.T03 MTR_5g014100 50.769 65 31 1 1 64 267 331 2.39e-12 60.8
MsG0280007678.01.T03 MTR_5g074710 49.231 65 33 0 1 65 258 322 4.03e-12 60.1
MsG0280007678.01.T03 MTR_4g029180 48.438 64 31 1 1 64 260 321 6.85e-12 59.7
MsG0280007678.01.T03 MTR_3g094670 51.667 60 27 1 1 60 261 318 7.58e-12 59.3
MsG0280007678.01.T03 MTR_2g040000 46.269 67 33 1 1 64 265 331 7.84e-12 59.3
MsG0280007678.01.T03 MTR_7g086820 43.077 65 35 1 1 65 251 313 8.98e-12 59.3
MsG0280007678.01.T03 MTR_4g029170 48.438 64 31 1 1 64 260 321 9.04e-12 59.3
MsG0280007678.01.T03 MTR_4g029190 48.438 64 31 1 1 64 279 340 1.01e-11 58.9
MsG0280007678.01.T03 MTR_3g466200 48.438 64 31 1 1 64 259 320 2.43e-11 58.2
MsG0280007678.01.T03 MTR_5g021060 43.750 64 35 1 1 64 268 330 3.65e-11 57.4
MsG0280007678.01.T03 MTR_3g467600 46.032 63 34 0 2 64 262 324 5.85e-11 57.0
MsG0280007678.01.T03 MTR_3g466180 45.312 64 33 1 1 64 262 323 5.95e-11 57.0
MsG0280007678.01.T03 MTR_6g043460 46.667 60 30 1 1 60 267 324 6.01e-11 57.0
MsG0280007678.01.T03 MTR_5g074860 42.857 63 36 0 1 63 223 285 6.04e-11 56.6
MsG0280007678.01.T03 MTR_5g074860 42.857 63 36 0 1 63 262 324 8.61e-11 56.6
MsG0280007678.01.T04 MTR_2g029750 96.667 60 2 0 1 60 272 331 7.75e-34 118
MsG0280007678.01.T04 MTR_2g029740 88.333 60 7 0 1 60 272 331 1.14e-30 110
MsG0280007678.01.T04 MTR_2g028980 80.000 60 12 0 1 60 272 331 3.55e-27 101
MsG0280007678.01.T04 MTR_2g029830 75.410 61 15 0 1 61 203 263 5.05e-26 97.1
MsG0280007678.01.T04 MTR_2g029880 74.576 59 15 0 1 59 130 188 1.68e-25 94.0
MsG0280007678.01.T04 MTR_2g029830 75.410 61 15 0 1 61 271 331 8.42e-25 94.7
MsG0280007678.01.T04 MTR_2g029860 73.770 61 16 0 1 61 272 332 2.54e-24 93.6
MsG0280007678.01.T04 MTR_2g029800 76.271 59 14 0 1 59 272 330 6.24e-24 92.4
MsG0280007678.01.T04 MTR_2g029815 74.576 59 15 0 1 59 272 330 7.67e-24 92.0
MsG0280007678.01.T04 MTR_2g029820 72.881 59 16 0 1 59 272 330 1.09e-23 92.0
MsG0280007678.01.T04 MTR_2g029910 74.576 59 15 0 1 59 274 332 1.45e-23 91.7
MsG0280007678.01.T04 MTR_2g029560 67.213 61 20 0 1 61 267 327 5.25e-22 87.0
MsG0280007678.01.T04 MTR_2g029730 70.492 61 18 0 1 61 268 328 3.80e-21 84.7
MsG0280007678.01.T04 MTR_2g029850 67.213 61 20 0 1 61 272 332 2.16e-19 80.1
MsG0280007678.01.T04 MTR_7g093370 62.712 59 22 0 1 59 313 371 1.59e-17 75.1
MsG0280007678.01.T04 MTR_1g054205 59.322 59 24 0 1 59 268 326 9.82e-16 70.1
MsG0280007678.01.T04 MTR_1g098320 48.333 60 29 1 1 60 68 125 6.02e-13 60.1
MsG0280007678.01.T04 MTR_6g043280 47.458 59 29 1 1 59 276 332 2.02e-11 58.2
MsG0280007678.01.T04 MTR_3g094650 56.364 55 22 1 1 55 266 318 2.45e-11 57.8
MsG0280007678.01.T04 MTR_5g014100 57.500 40 17 0 20 59 292 331 7.31e-11 56.6
MsG0280007678.01.T04 MTR_5g074760 49.180 61 31 0 1 61 263 323 8.35e-11 56.2
MsG0280007678.01.T04 MTR_5g074970 52.542 59 26 1 1 59 270 326 9.64e-11 56.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007678.01.T02 AT2G38380 55.696 79 35 0 1 79 258 336 3.71e-26 99.4
MsG0280007678.01.T02 AT5G19880 55.263 76 34 0 1 76 254 329 1.31e-25 97.4
MsG0280007678.01.T02 AT2G38390 54.430 79 36 0 1 79 258 336 1.76e-24 94.7
MsG0280007678.01.T02 AT5G06730 59.211 76 31 0 1 76 259 334 3.16e-24 94.4
MsG0280007678.01.T02 AT5G06720 60.526 76 30 0 1 76 258 333 3.99e-23 90.9
MsG0280007678.01.T02 AT1G14550 53.947 76 34 1 1 76 247 321 2.39e-19 80.5
MsG0280007678.01.T02 AT4G08780 48.052 77 39 1 1 76 251 327 2.69e-19 80.9
MsG0280007678.01.T02 AT3G49120 48.148 81 41 1 1 80 259 339 4.56e-19 80.1
MsG0280007678.01.T02 AT3G32980 48.148 81 41 1 1 80 258 338 8.06e-19 79.3
MsG0280007678.01.T02 AT4G08770 49.351 77 38 1 1 76 251 327 9.19e-19 79.3
MsG0280007678.01.T02 AT3G49110 48.148 81 41 1 1 80 260 340 1.05e-18 79.3
MsG0280007678.01.T02 AT1G14540 52.632 76 35 1 1 76 241 315 3.28e-18 77.4
MsG0280007678.01.T02 AT4G36430 47.368 76 39 1 1 76 256 330 1.77e-15 70.1
MsG0280007678.01.T02 AT5G66390 47.368 76 39 1 1 76 259 333 1.89e-15 70.1
MsG0280007678.01.T02 AT4G30170 46.053 76 39 1 1 76 252 325 2.11e-15 69.7
MsG0280007678.01.T02 AT5G05340 48.684 76 37 1 1 76 251 324 3.65e-15 69.3
MsG0280007678.01.T02 AT3G50990 44.304 79 43 1 1 79 267 344 4.35e-15 68.9
MsG0280007678.01.T02 AT2G18140 44.872 78 42 1 1 78 261 337 9.49e-15 68.2
MsG0280007678.01.T02 AT3G28200 39.474 76 44 1 1 76 243 316 7.73e-14 65.5
MsG0280007678.01.T02 AT2G18150 43.590 78 43 1 1 78 262 338 1.01e-13 65.5
MsG0280007678.01.T02 AT5G64120 45.333 75 39 1 2 76 256 328 1.06e-13 65.1
MsG0280007678.01.T02 AT2G35380 46.753 77 40 1 1 76 259 335 1.18e-13 65.1
MsG0280007678.01.T02 AT1G49570 45.946 74 38 1 1 74 277 348 1.21e-13 65.1
MsG0280007678.01.T02 AT2G18980 43.421 76 41 1 1 76 250 323 1.44e-13 64.7
MsG0280007678.01.T02 AT4G33420 44.737 76 40 1 1 76 299 372 2.57e-13 64.3
MsG0280007678.01.T02 AT5G17820 38.158 76 45 1 1 76 240 313 2.61e-13 63.9
MsG0280007678.01.T02 AT4G33420 44.737 76 40 1 1 76 252 325 3.74e-13 63.5
MsG0280007678.01.T02 AT2G35380 46.753 77 40 1 1 76 171 247 4.68e-13 62.8
MsG0280007678.01.T02 AT1G71695 43.421 76 41 1 1 76 266 339 6.65e-13 63.2
MsG0280007678.01.T02 AT5G17820 38.158 76 45 1 1 76 293 366 7.16e-13 63.2
MsG0280007678.01.T02 AT5G58390 42.105 76 42 1 1 76 243 316 7.33e-13 62.8
MsG0280007678.01.T02 AT4G17690 41.558 77 43 1 1 77 249 323 1.04e-12 62.4
MsG0280007678.01.T02 AT4G16270 44.156 77 38 3 1 76 276 348 1.12e-12 62.4
MsG0280007678.01.T02 AT5G58400 40.789 76 43 1 1 76 252 325 1.52e-12 62.0
MsG0280007678.01.T02 AT5G39580 44.737 76 40 1 1 76 246 319 1.56e-12 62.0
MsG0280007678.01.T02 AT5G15180 39.474 76 45 1 1 76 255 329 1.89e-12 61.6
MsG0280007678.01.T02 AT4G37520 46.053 76 39 1 1 76 253 326 2.41e-12 61.2
MsG0280007678.01.T02 AT5G19890 43.590 78 40 2 1 76 252 327 2.78e-12 61.2
MsG0280007678.01.T02 AT4G37520 46.053 76 39 1 1 76 256 329 3.08e-12 61.2
MsG0280007678.01.T02 AT5G40150 39.474 76 44 1 1 76 255 328 5.24e-12 60.5
MsG0280007678.01.T02 AT4G11290 44.156 77 40 2 1 76 252 326 5.70e-12 60.5
MsG0280007678.01.T02 AT5G14130 38.158 76 45 1 1 76 257 330 9.34e-12 59.7
MsG0280007678.01.T02 AT5G14130 38.158 76 45 1 1 76 298 371 1.00e-11 59.7
MsG0280007678.01.T02 AT4G21960 41.026 78 44 1 1 78 254 329 2.21e-11 58.5
MsG0280007678.01.T02 AT4G37530 44.737 76 40 1 1 76 256 329 5.09e-11 57.8
MsG0280007678.01.T02 AT2G24800 39.474 76 44 1 1 76 256 329 7.62e-11 57.4
MsG0280007678.01.T01 AT5G19880 55.952 84 37 0 1 84 246 329 4.24e-30 109
MsG0280007678.01.T01 AT2G38380 55.172 87 39 0 1 87 250 336 6.55e-29 107
MsG0280007678.01.T01 AT5G06730 57.143 84 36 0 1 84 251 334 1.61e-26 100
MsG0280007678.01.T01 AT2G38390 52.874 87 41 0 1 87 250 336 2.08e-26 100
MsG0280007678.01.T01 AT5G06720 58.333 84 35 0 1 84 250 333 1.83e-25 97.4
MsG0280007678.01.T01 AT1G14550 51.190 84 40 1 1 84 239 321 4.92e-21 85.5
MsG0280007678.01.T01 AT4G08780 47.059 85 44 1 1 84 243 327 1.83e-20 84.3
MsG0280007678.01.T01 AT3G49120 47.191 89 46 1 1 88 251 339 2.47e-20 84.0
MsG0280007678.01.T01 AT3G32980 47.191 89 46 1 1 88 250 338 4.25e-20 83.2
MsG0280007678.01.T01 AT4G08770 48.235 85 43 1 1 84 243 327 6.21e-20 82.8
MsG0280007678.01.T01 AT1G14540 50.000 84 41 1 1 84 233 315 9.87e-20 82.0
MsG0280007678.01.T01 AT3G49110 47.191 89 46 1 1 88 252 340 1.62e-19 81.6
MsG0280007678.01.T01 AT4G30170 46.988 83 42 1 2 84 245 325 1.34e-18 79.0
MsG0280007678.01.T01 AT2G18980 44.578 83 44 1 2 84 243 323 2.68e-17 75.5
MsG0280007678.01.T01 AT3G50990 43.678 87 48 1 1 87 259 344 5.37e-17 74.7
MsG0280007678.01.T01 AT5G66390 46.429 84 44 1 1 84 251 333 8.06e-17 74.3
MsG0280007678.01.T01 AT5G05340 46.429 84 43 1 1 84 243 324 9.13e-16 71.2
MsG0280007678.01.T01 AT4G17690 42.353 85 47 1 1 85 241 323 1.22e-15 70.9
MsG0280007678.01.T01 AT5G58390 42.500 80 44 1 1 80 235 312 2.31e-15 70.1
MsG0280007678.01.T01 AT4G36430 44.048 84 46 1 1 84 248 330 2.60e-15 70.1
MsG0280007678.01.T01 AT2G18140 41.860 86 49 1 1 86 253 337 5.03e-15 69.3
MsG0280007678.01.T01 AT3G28200 39.759 83 48 1 2 84 236 316 5.79e-15 68.9
MsG0280007678.01.T01 AT4G37520 46.429 84 43 1 1 84 245 326 8.18e-15 68.6
MsG0280007678.01.T01 AT4G37520 46.429 84 43 1 1 84 248 329 8.31e-15 68.6
MsG0280007678.01.T01 AT5G58400 40.476 84 48 1 1 84 244 325 9.00e-15 68.6
MsG0280007678.01.T01 AT1G71695 43.373 83 45 1 2 84 259 339 1.33e-14 68.2
MsG0280007678.01.T01 AT5G17820 36.905 84 51 1 1 84 232 313 1.56e-14 67.8
MsG0280007678.01.T01 AT2G35380 44.706 85 46 1 1 84 251 335 1.56e-14 67.8
MsG0280007678.01.T01 AT5G17820 36.905 84 51 1 1 84 285 366 1.59e-14 68.2
MsG0280007678.01.T01 AT2G35380 44.706 85 46 1 1 84 163 247 2.41e-14 66.6
MsG0280007678.01.T01 AT1G49570 43.902 82 44 1 1 82 269 348 2.79e-14 67.4
MsG0280007678.01.T01 AT5G40150 39.759 83 48 1 2 84 248 328 4.10e-14 66.6
MsG0280007678.01.T01 AT4G33420 45.238 84 43 2 1 84 292 372 4.54e-14 66.6
MsG0280007678.01.T01 AT2G18150 40.698 86 50 1 1 86 254 338 4.86e-14 66.6
MsG0280007678.01.T01 AT4G33420 45.238 84 43 2 1 84 245 325 6.80e-14 65.9
MsG0280007678.01.T01 AT4G16270 42.353 85 44 3 1 84 268 348 9.97e-14 65.9
MsG0280007678.01.T01 AT4G37530 44.048 84 45 1 1 84 248 329 1.35e-13 65.1
MsG0280007678.01.T01 AT5G64120 45.333 75 39 1 10 84 256 328 1.40e-13 65.1
MsG0280007678.01.T01 AT5G19890 41.860 86 46 2 1 84 244 327 1.53e-13 65.1
MsG0280007678.01.T01 AT5G15180 38.095 84 51 1 1 84 247 329 2.09e-13 64.7
MsG0280007678.01.T01 AT5G14130 38.554 83 49 1 2 84 250 330 2.66e-13 64.3
MsG0280007678.01.T01 AT4G11290 42.857 84 45 2 2 84 245 326 2.81e-13 64.3
MsG0280007678.01.T01 AT5G14130 38.554 83 49 1 2 84 291 371 2.97e-13 64.3
MsG0280007678.01.T01 AT5G39580 41.667 84 47 1 1 84 238 319 9.40e-13 62.8
MsG0280007678.01.T01 AT1G30870 42.529 87 45 3 1 84 261 345 1.12e-12 62.8
MsG0280007678.01.T01 AT5G67400 38.554 83 49 1 2 84 249 329 2.03e-12 62.0
MsG0280007678.01.T01 AT2G24800 38.554 83 49 1 2 84 249 329 3.46e-12 61.2
MsG0280007678.01.T01 AT1G68850 38.824 85 50 2 2 84 251 335 4.79e-12 60.8
MsG0280007678.01.T01 AT4G21960 40.000 85 49 1 2 86 247 329 7.14e-12 60.5
MsG0280007678.01.T01 AT4G31760 34.940 83 52 1 2 84 246 326 1.67e-11 59.3
MsG0280007678.01.T01 AT3G49960 36.145 83 51 1 2 84 249 329 4.59e-11 58.2
MsG0280007678.01.T01 AT5G47000 36.145 83 51 1 2 84 250 330 5.07e-11 58.2
MsG0280007678.01.T03 AT2G38380 58.209 67 28 0 1 67 270 336 5.54e-22 87.4
MsG0280007678.01.T03 AT5G19880 57.812 64 27 0 1 64 266 329 7.11e-21 84.3
MsG0280007678.01.T03 AT2G38390 56.716 67 29 0 1 67 270 336 1.97e-20 83.2
MsG0280007678.01.T03 AT5G06730 61.905 63 24 0 2 64 272 334 2.75e-20 82.8
MsG0280007678.01.T03 AT5G06720 62.500 64 24 0 1 64 270 333 2.38e-19 80.1
MsG0280007678.01.T03 AT4G08780 49.231 65 32 1 1 64 263 327 7.90e-16 70.5
MsG0280007678.01.T03 AT3G32980 49.275 69 34 1 1 68 270 338 1.05e-15 70.5
MsG0280007678.01.T03 AT4G08770 50.769 65 31 1 1 64 263 327 2.17e-15 69.3
MsG0280007678.01.T03 AT3G49120 49.275 69 34 1 1 68 271 339 3.49e-15 68.9
MsG0280007678.01.T03 AT3G49110 49.275 69 34 1 1 68 272 340 5.38e-15 68.6
MsG0280007678.01.T03 AT1G14550 53.125 64 29 1 1 64 259 321 6.11e-14 65.5
MsG0280007678.01.T03 AT5G66390 50.000 64 31 1 1 64 271 333 6.01e-13 62.8
MsG0280007678.01.T03 AT1G14540 51.562 64 30 1 1 64 253 315 7.42e-13 62.4
MsG0280007678.01.T03 AT4G36430 50.000 64 31 1 1 64 268 330 1.06e-12 62.0
MsG0280007678.01.T03 AT3G50990 44.776 67 36 1 1 67 279 344 1.89e-12 61.2
MsG0280007678.01.T03 AT2G18140 47.692 65 33 1 2 66 274 337 3.62e-12 60.5
MsG0280007678.01.T03 AT4G30170 46.875 64 32 1 1 64 264 325 9.01e-12 59.3
MsG0280007678.01.T03 AT2G35380 49.231 65 32 1 1 64 271 335 2.14e-11 58.2
MsG0280007678.01.T03 AT2G18150 46.154 65 34 1 2 66 275 338 2.61e-11 58.2
MsG0280007678.01.T03 AT5G17820 43.750 64 34 1 1 64 252 313 2.96e-11 57.8
MsG0280007678.01.T03 AT5G05340 50.000 64 30 1 1 64 263 324 4.55e-11 57.4
MsG0280007678.01.T03 AT1G49570 47.541 61 30 1 2 62 290 348 6.18e-11 57.0
MsG0280007678.01.T03 AT2G35380 49.231 65 32 1 1 64 183 247 6.47e-11 56.6
MsG0280007678.01.T03 AT5G17820 43.750 64 34 1 1 64 305 366 7.94e-11 56.6
MsG0280007678.01.T03 AT5G58400 43.750 64 34 1 1 64 264 325 9.29e-11 56.6
MsG0280007678.01.T04 AT5G19880 61.017 59 23 0 1 59 271 329 4.35e-19 79.3
MsG0280007678.01.T04 AT2G38380 56.452 62 27 0 1 62 275 336 9.77e-19 78.6
MsG0280007678.01.T04 AT5G06730 59.322 59 24 0 1 59 276 334 1.28e-17 75.5
MsG0280007678.01.T04 AT2G38390 54.839 62 28 0 1 62 275 336 3.06e-17 74.3
MsG0280007678.01.T04 AT5G06720 61.017 59 23 0 1 59 275 333 1.15e-16 72.8
MsG0280007678.01.T04 AT4G08780 46.667 60 31 1 1 59 268 327 9.80e-13 61.6
MsG0280007678.01.T04 AT3G32980 46.875 64 33 1 1 63 275 338 1.24e-12 61.6
MsG0280007678.01.T04 AT4G08770 48.333 60 30 1 1 59 268 327 2.71e-12 60.5
MsG0280007678.01.T04 AT3G49120 46.875 64 33 1 1 63 276 339 4.07e-12 60.1
MsG0280007678.01.T04 AT3G49110 46.875 64 33 1 1 63 277 340 6.41e-12 59.7
MsG0280007678.01.T04 AT1G14550 50.847 59 28 1 1 59 264 321 1.12e-11 58.9

Find 25 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAAATTCAATGATTAAAA+TGG 0.110406 2:+19034233 MsG0280007678.01.T01:CDS
CAACAATCTTCAAGGTAAAA+AGG 0.173562 2:+19034107 MsG0280007678.01.T01:CDS
ATGATTAAAATGGGTAATAT+TGG 0.268702 2:+19034243 MsG0280007678.01.T01:CDS
AGTTCTGGAAGAAAACATTT+TGG 0.286167 2:-19034209 None:intergenic
TTAACAAGAATCTTCTGAAT+TGG 0.295243 2:+19034313 MsG0280007678.01.T01:CDS
TAGTTCTTGTCTAATTTATC+AGG 0.314728 2:-19034081 None:intergenic
GGTAATATTGGCGTGCTTAC+CGG 0.320336 2:+19034255 MsG0280007678.01.T01:CDS
AAAGTTGTTGACAATGCTAA+TGG 0.353968 2:-19034178 None:intergenic
TCATTGAATTTATAAAGTTC+TGG 0.362635 2:-19034224 None:intergenic
ATTAGCATTGTCAACAACTT+TGG 0.377288 2:+19034180 MsG0280007678.01.T01:CDS
TCTAATTTATCAGGATTTGT+TGG 0.391235 2:-19034072 None:intergenic
AACTACTACAACAATCTTCA+AGG 0.429163 2:+19034099 MsG0280007678.01.T01:CDS
ATAAATTCAATGATTAAAAT+GGG 0.430148 2:+19034234 MsG0280007678.01.T01:CDS
TGTGGCCTCTTCAGAATCAA+TGG 0.473348 2:+19034346 MsG0280007678.01.T01:CDS
GCCTCTTCAGAATCAATGGA+TGG 0.527317 2:+19034350 MsG0280007678.01.T01:CDS
GGCGTGCTTACCGGAAAGAA+AGG 0.528185 2:+19034264 MsG0280007678.01.T01:CDS
CAGAATCAATGGATGGGGAT+AGG 0.536321 2:+19034357 MsG0280007678.01.T01:CDS
CAAGAATTGTTCTCAACACC+GGG 0.545895 2:+19034147 MsG0280007678.01.T01:CDS
CTCTTCAGAATCAATGGATG+GGG 0.554891 2:+19034352 MsG0280007678.01.T01:CDS
CCTCTTCAGAATCAATGGAT+GGG 0.557831 2:+19034351 MsG0280007678.01.T01:CDS
TCAAGAATTGTTCTCAACAC+CGG 0.581146 2:+19034146 MsG0280007678.01.T01:CDS
CCCATCCATTGATTCTGAAG+AGG 0.588983 2:-19034351 None:intergenic
TGAATTGGATCTTGCCACTG+TGG 0.589040 2:+19034328 MsG0280007678.01.T01:CDS
ATGCTAATGGTATCTGCACC+CGG 0.620520 2:-19034165 None:intergenic
TGATTCTGAAGAGGCCACAG+TGG 0.697720 2:-19034342 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTCAATGATTAAAAT+GGG + Chr2:19034234-19034253 MsG0280007678.01.T01:CDS 10.0%
!! TATAAATTCAATGATTAAAA+TGG + Chr2:19034233-19034252 MsG0280007678.01.T01:CDS 10.0%
!! ATGATTAAAATGGGTAATAT+TGG + Chr2:19034243-19034262 MsG0280007678.01.T01:CDS 20.0%
!! TCATTGAATTTATAAAGTTC+TGG - Chr2:19034227-19034246 None:intergenic 20.0%
! AACAATCTTCAAGGTAAAAA+GGG + Chr2:19034108-19034127 MsG0280007678.01.T01:CDS 25.0%
! TAGTTCTTGTCTAATTTATC+AGG - Chr2:19034084-19034103 None:intergenic 25.0%
! TCTAATTTATCAGGATTTGT+TGG - Chr2:19034075-19034094 None:intergenic 25.0%
! TTAACAAGAATCTTCTGAAT+TGG + Chr2:19034313-19034332 MsG0280007678.01.T01:CDS 25.0%
AAAGTTGTTGACAATGCTAA+TGG - Chr2:19034181-19034200 None:intergenic 30.0%
AACTACTACAACAATCTTCA+AGG + Chr2:19034099-19034118 MsG0280007678.01.T01:CDS 30.0%
ATTAGCATTGTCAACAACTT+TGG + Chr2:19034180-19034199 MsG0280007678.01.T01:CDS 30.0%
CAACAATCTTCAAGGTAAAA+AGG + Chr2:19034107-19034126 MsG0280007678.01.T01:CDS 30.0%
! TCTATTTTCTCCTTTCTTTC+CGG - Chr2:19034277-19034296 None:intergenic 30.0%
!!! AGTTCTGGAAGAAAACATTT+TGG - Chr2:19034212-19034231 None:intergenic 30.0%
TCAAGAATTGTTCTCAACAC+CGG + Chr2:19034146-19034165 MsG0280007678.01.T01:CDS 35.0%
CAAGAATTGTTCTCAACACC+GGG + Chr2:19034147-19034166 MsG0280007678.01.T01:CDS 40.0%
CCTCTTCAGAATCAATGGAT+GGG + Chr2:19034351-19034370 MsG0280007678.01.T01:CDS 40.0%
CTCTTCAGAATCAATGGATG+GGG + Chr2:19034352-19034371 MsG0280007678.01.T01:CDS 40.0%
ATGCTAATGGTATCTGCACC+CGG - Chr2:19034168-19034187 None:intergenic 45.0%
CAGAATCAATGGATGGGGAT+AGG + Chr2:19034357-19034376 MsG0280007678.01.T01:CDS 45.0%
GCCTCTTCAGAATCAATGGA+TGG + Chr2:19034350-19034369 MsG0280007678.01.T01:CDS 45.0%
GGTAATATTGGCGTGCTTAC+CGG + Chr2:19034255-19034274 MsG0280007678.01.T01:CDS 45.0%
TGAATTGGATCTTGCCACTG+TGG + Chr2:19034328-19034347 MsG0280007678.01.T01:CDS 45.0%
TGTGGCCTCTTCAGAATCAA+TGG + Chr2:19034346-19034365 MsG0280007678.01.T01:CDS 45.0%
!! CCCATCCATTGATTCTGAAG+AGG - Chr2:19034354-19034373 None:intergenic 45.0%
! TGATTCTGAAGAGGCCACAG+TGG - Chr2:19034345-19034364 None:intergenic 50.0%
GGCGTGCTTACCGGAAAGAA+AGG + Chr2:19034264-19034283 MsG0280007678.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr2 gene 19034066 19034383 19034066 ID=MsG0280007678.01;Name=MsG0280007678.01
Chr2 mRNA 19034066 19034383 19034066 ID=MsG0280007678.01.T01;Parent=MsG0280007678.01;Name=MsG0280007678.01.T01;_AED=0.50;_eAED=0.59;_QI=0|-1|0|1|-1|0|1|0|105
Chr2 exon 19034066 19034383 19034066 ID=MsG0280007678.01.T01:exon:10109;Parent=MsG0280007678.01.T01
Chr2 CDS 19034066 19034383 19034066 ID=MsG0280007678.01.T01:cds;Parent=MsG0280007678.01.T01
Chr2 mRNA 19034090 19034383 19034090 ID=MsG0280007678.01.T02;Parent=MsG0280007678.01;Name=MsG0280007678.01.T02;_AED=0.50;_eAED=0.60;_QI=0|-1|0|1|-1|0|1|0|97
Chr2 exon 19034090 19034383 19034090 ID=MsG0280007678.01.T02:exon:10110;Parent=MsG0280007678.01.T02
Chr2 CDS 19034090 19034383 19034090 ID=MsG0280007678.01.T02:cds;Parent=MsG0280007678.01.T02
Chr2 mRNA 19034126 19034383 19034126 ID=MsG0280007678.01.T03;Parent=MsG0280007678.01;Name=MsG0280007678.01.T03;_AED=0.50;_eAED=0.61;_QI=0|-1|0|1|-1|0|1|0|85
Chr2 exon 19034126 19034383 19034126 ID=MsG0280007678.01.T03:exon:10111;Parent=MsG0280007678.01.T03
Chr2 CDS 19034126 19034383 19034126 ID=MsG0280007678.01.T03:cds;Parent=MsG0280007678.01.T03
Chr2 mRNA 19034141 19034383 19034141 ID=MsG0280007678.01.T04;Parent=MsG0280007678.01;Name=MsG0280007678.01.T04;_AED=0.50;_eAED=0.62;_QI=0|-1|0|1|-1|0|1|0|80
Chr2 exon 19034141 19034383 19034141 ID=MsG0280007678.01.T04:exon:10112;Parent=MsG0280007678.01.T04
Chr2 CDS 19034141 19034383 19034141 ID=MsG0280007678.01.T04:cds;Parent=MsG0280007678.01.T04
Chr2 mRNA 19034243 19034383 19034243 ID=MsG0280007678.01.T05;Parent=MsG0280007678.01;Name=MsG0280007678.01.T05;_AED=0.50;_eAED=0.71;_QI=0|-1|0|1|-1|0|1|0|46
Chr2 exon 19034243 19034383 19034243 ID=MsG0280007678.01.T05:exon:10113;Parent=MsG0280007678.01.T05
Chr2 CDS 19034243 19034383 19034243 ID=MsG0280007678.01.T05:cds;Parent=MsG0280007678.01.T05
Gene Sequence

>MsG0280007678.01.T02

TTAGACAAGAACTACTACAACAATCTTCAAGGTAAAAAGGGTTTGCTTCAAAGTGATCAAGAATTGTTCTCAACACCGGGTGCAGATACCATTAGCATTGTCAACAACTTTGGAAATAACCAAAATGTTTTCTTCCAGAACTTTATAAATTCAATGATTAAAATGGGTAATATTGGCGTGCTTACCGGAAAGAAAGGAGAAAATAGAAAAAAATGCAATTTTGTTAACAAGAATCTTCTGAATTGGATCTTGCCACTGTGGCCTCTTCAGAATCAATGGATGGGGATAGGTTAG

>MsG0280007678.01.T01

TTCGATCCAACAAATCCTGATAAATTAGACAAGAACTACTACAACAATCTTCAAGGTAAAAAGGGTTTGCTTCAAAGTGATCAAGAATTGTTCTCAACACCGGGTGCAGATACCATTAGCATTGTCAACAACTTTGGAAATAACCAAAATGTTTTCTTCCAGAACTTTATAAATTCAATGATTAAAATGGGTAATATTGGCGTGCTTACCGGAAAGAAAGGAGAAAATAGAAAAAAATGCAATTTTGTTAACAAGAATCTTCTGAATTGGATCTTGCCACTGTGGCCTCTTCAGAATCAATGGATGGGGATAGGTTAG

>MsG0280007678.01.T03

AAGGGTTTGCTTCAAAGTGATCAAGAATTGTTCTCAACACCGGGTGCAGATACCATTAGCATTGTCAACAACTTTGGAAATAACCAAAATGTTTTCTTCCAGAACTTTATAAATTCAATGATTAAAATGGGTAATATTGGCGTGCTTACCGGAAAGAAAGGAGAAAATAGAAAAAAATGCAATTTTGTTAACAAGAATCTTCTGAATTGGATCTTGCCACTGTGGCCTCTTCAGAATCAATGGATGGGGATAGGTTAG

>MsG0280007678.01.T05

ATGATTAAAATGGGTAATATTGGCGTGCTTACCGGAAAGAAAGGAGAAAATAGAAAAAAATGCAATTTTGTTAACAAGAATCTTCTGAATTGGATCTTGCCACTGTGGCCTCTTCAGAATCAATGGATGGGGATAGGTTAG

>MsG0280007678.01.T04

AGTGATCAAGAATTGTTCTCAACACCGGGTGCAGATACCATTAGCATTGTCAACAACTTTGGAAATAACCAAAATGTTTTCTTCCAGAACTTTATAAATTCAATGATTAAAATGGGTAATATTGGCGTGCTTACCGGAAAGAAAGGAGAAAATAGAAAAAAATGCAATTTTGTTAACAAGAATCTTCTGAATTGGATCTTGCCACTGTGGCCTCTTCAGAATCAATGGATGGGGATAGGTTAG

Protein sequence

>MsG0280007678.01.T02

LDKNYYNNLQGKKGLLQSDQELFSTPGADTISIVNNFGNNQNVFFQNFINSMIKMGNIGVLTGKKGENRKKCNFVNKNLLNWILPLWPLQNQWMGIG*

>MsG0280007678.01.T01

FDPTNPDKLDKNYYNNLQGKKGLLQSDQELFSTPGADTISIVNNFGNNQNVFFQNFINSMIKMGNIGVLTGKKGENRKKCNFVNKNLLNWILPLWPLQNQWMGIG*

>MsG0280007678.01.T03

KGLLQSDQELFSTPGADTISIVNNFGNNQNVFFQNFINSMIKMGNIGVLTGKKGENRKKCNFVNKNLLNWILPLWPLQNQWMGIG*

>MsG0280007678.01.T05

MIKMGNIGVLTGKKGENRKKCNFVNKNLLNWILPLWPLQNQWMGIG*

>MsG0280007678.01.T04

SDQELFSTPGADTISIVNNFGNNQNVFFQNFINSMIKMGNIGVLTGKKGENRKKCNFVNKNLLNWILPLWPLQNQWMGIG*