AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006316.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006316.01.T01 MTR_2g005870 96.963 889 17 4 1 886 1 882 0.0 1737
MsG0280006316.01.T01 MTR_2g005870 95.989 698 18 4 1 695 1 691 0.0 1351
MsG0280006316.01.T01 MTR_7g117580 61.224 833 296 8 62 886 11 824 0.0 987
MsG0280006316.01.T01 MTR_7g117580 74.536 593 149 2 295 886 9 600 0.0 893
MsG0280006316.01.T01 MTR_7g117580 59.384 682 248 8 62 735 11 671 0.0 779
MsG0280006316.01.T01 MTR_7g117580 56.642 542 210 6 62 596 11 534 0.0 595
MsG0280006316.01.T01 MTR_1g076330 23.766 770 475 20 197 886 111 848 9.49e-50 189
MsG0280006316.01.T01 MTR_1g076330 23.766 770 475 20 197 886 17 754 1.32e-49 188
MsG0280006316.01.T01 MTR_1g076330 23.766 770 475 20 197 886 95 832 1.51e-49 189
MsG0280006316.01.T01 MTR_1g076330 23.262 705 431 19 197 821 111 785 1.64e-40 161
MsG0280006316.01.T01 MTR_1g076330 23.262 705 431 19 197 821 90 764 3.30e-40 160
MsG0280006316.01.T01 MTR_1g076330 23.423 555 343 13 197 677 111 657 2.88e-36 147
MsG0280006316.01.T01 MTR_1g076330 23.423 555 343 13 197 677 90 636 4.06e-36 146
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006316.01.T01 AT5G49960 71.851 778 200 4 112 886 63 824 0.0 1116
MsG0280006316.01.T01 AT5G49960 69.847 587 158 4 112 695 63 633 0.0 803
MsG0280006316.01.T01 AT5G49960 69.966 586 157 4 112 694 63 632 0.0 803
MsG0280006316.01.T01 AT5G02940 23.032 686 430 17 258 886 162 806 1.85e-47 182
MsG0280006316.01.T01 AT5G43745 22.650 702 447 18 241 886 149 810 1.80e-46 179
MsG0280006316.01.T01 AT5G02940 22.631 707 430 18 258 886 162 829 9.53e-45 174

Find 209 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATCTTCTCTGGATATTT+AGG 0.059109 2:-380649 None:intergenic
AATTATAATTAGTGAAATTT+TGG 0.103985 2:+383425 MsG0280006316.01.T01:CDS
ATACAAAGTCAACTTCTTTA+AGG 0.121310 2:+383343 MsG0280006316.01.T01:CDS
TCAACTTCTTTAAGGTTATC+TGG 0.148103 2:+383351 MsG0280006316.01.T01:CDS
CTGAAGCACTTTGGCATTCT+TGG 0.155246 2:+378622 MsG0280006316.01.T01:CDS
TAAGCAACTCTCTTCTTTAA+TGG 0.194129 2:-378477 None:intergenic
ACCACCACCAACACTCTTAT+TGG 0.207987 2:-379057 None:intergenic
GCTGGTGAACTTGACGTATT+TGG 0.234337 2:+382600 MsG0280006316.01.T01:CDS
TTTCTATGATATAATGATTA+GGG 0.234885 2:+383837 MsG0280006316.01.T01:CDS
AGAAGGTTTACAGGAGGTTT+GGG 0.262952 2:-377837 None:intergenic
TTAGCATTGTATGCGGTTAC+TGG 0.270092 2:+378588 MsG0280006316.01.T01:CDS
TCCAATTCCATTGTTATCAT+TGG 0.279469 2:-377694 None:intergenic
ACTTTCTTTCTTATAGCATT+TGG 0.285380 2:+378561 MsG0280006316.01.T01:CDS
TGAGGAGGAAGAAGGTTTAC+AGG 0.292914 2:-377846 None:intergenic
ATATCTTCTCTGGATATTTA+GGG 0.299093 2:-380648 None:intergenic
GTTTCTATGATATAATGATT+AGG 0.302034 2:+383836 MsG0280006316.01.T01:CDS
AAGAAGGTTTACAGGAGGTT+TGG 0.311078 2:-377838 None:intergenic
CCCAATGATAACAATGGAAT+TGG 0.314539 2:+377693 MsG0280006316.01.T01:CDS
CTTATATTTGCCATGATGCT+TGG 0.316969 2:+378732 MsG0280006316.01.T01:CDS
CCTTGGCTGGAGTGACAAAT+TGG 0.326021 2:+378839 MsG0280006316.01.T01:CDS
TAATACATAATCACTTATTC+TGG 0.330596 2:-383478 None:intergenic
CTGACTCATCTGCAAGAATA+AGG 0.331840 2:-383098 None:intergenic
TAGCTTTGCATAAGGATATA+TGG 0.335862 2:-378520 None:intergenic
TCGGAGCGGGGACGGGGATG+AGG 0.337366 2:-377864 None:intergenic
ACAAGAAAGGAAATTGTTAT+AGG 0.337572 2:+383865 MsG0280006316.01.T01:CDS
AATCAATAATACCTTGAGTT+TGG 0.344241 2:-378150 None:intergenic
GTATTGTAAATAAGCTGAAT+AGG 0.345906 2:-378120 None:intergenic
CATGATGCTTGGGCTTGTTT+CGG 0.347132 2:+378743 MsG0280006316.01.T01:CDS
TTTACAGGAGGTTTGGGAGG+AGG 0.349529 2:-377831 None:intergenic
CTCAAGAAATTAATTATTTG+AGG 0.355978 2:-378426 None:intergenic
GTTGTAGTCGGAGCGGGGAC+GGG 0.359710 2:-377871 None:intergenic
GTTGTTGCACATGATGTAAT+TGG 0.366075 2:+379605 MsG0280006316.01.T01:CDS
CCAATTCCATTGTTATCATT+GGG 0.370133 2:-377693 None:intergenic
TTATATTTGCCATGATGCTT+GGG 0.370290 2:+378733 MsG0280006316.01.T01:CDS
ACAGGAGGTTTGGGAGGAGG+AGG 0.371831 2:-377828 None:intergenic
ATGACCTCTGGCAGTGGGCC+TGG 0.374256 2:-380066 None:intergenic
TCCATTGTTATCATTGGGAT+TGG 0.382263 2:-377688 None:intergenic
CTGAAGCTTGCTGCATTTCG+CGG 0.383020 2:-383395 None:intergenic
TTCTTTCTTATAGCATTTGG+TGG 0.392754 2:+378564 MsG0280006316.01.T01:CDS
AAAGCTCGAATTCGATTTCA+TGG 0.392854 2:+379133 MsG0280006316.01.T01:CDS
GGAGGTTTGGGAGGAGGAGG+AGG 0.393160 2:-377825 None:intergenic
CAGATATGGGAGGACATTCT+AGG 0.400897 2:+379832 MsG0280006316.01.T01:intron
TATTGTAAATAAGCTGAATA+GGG 0.401722 2:-378119 None:intergenic
CCACAAAACAATATCTTCTC+TGG 0.406015 2:-380658 None:intergenic
GCTTGTTTCGGATGCTATAT+CGG 0.406162 2:+378755 MsG0280006316.01.T01:CDS
GAGCGGGGACGGGGATGAGG+AGG 0.406620 2:-377861 None:intergenic
ACCACGGCAATACCTTCTTT+AGG 0.407676 2:-379202 None:intergenic
TGGAACTACCCTTCTTTCCT+TGG 0.409640 2:+377768 MsG0280006316.01.T01:CDS
TGGCCCCTGGTTCAGAACTC+TGG 0.410692 2:+382532 MsG0280006316.01.T01:CDS
AGAGTTGTTCTTAGCTTAGC+TGG 0.415399 2:+379485 MsG0280006316.01.T01:CDS
GGAAAAGGAGGAAATGGAAA+TGG 0.419814 2:+379103 MsG0280006316.01.T01:CDS
AAAAGAAGATCATCCAGTTC+AGG 0.420879 2:-379889 None:intergenic
TTGTAGTCGGAGCGGGGACG+GGG 0.420945 2:-377870 None:intergenic
TTGTTGTTGTTGTTTGGTGA+TGG 0.428490 2:-377934 None:intergenic
TACCCTTCTTTCCTTGGCAT+TGG 0.429924 2:+377774 MsG0280006316.01.T01:CDS
TTAGAAGCATTCTTGGCCCC+TGG 0.430654 2:+382519 MsG0280006316.01.T01:CDS
TCACTAAGGGTTCATTATCA+AGG 0.432066 2:-379553 None:intergenic
CTCAGAACATAATTATCATC+TGG 0.433266 2:-379994 None:intergenic
AGAAAAGGAAAAGGAGGAAA+TGG 0.437214 2:+379097 MsG0280006316.01.T01:CDS
CCATTGTTATCATTGGGATT+GGG 0.438475 2:-377687 None:intergenic
CAACTTCTTTAAGGTTATCT+GGG 0.440114 2:+383352 MsG0280006316.01.T01:CDS
AGAAAGATGACCTCTGGCAG+TGG 0.445575 2:-380072 None:intergenic
TCTGCAGCCTGGCCTTGCAC+AGG 0.447407 2:+379649 MsG0280006316.01.T01:CDS
CTCAAATAATTAATTTCTTG+AGG 0.448844 2:+378427 MsG0280006316.01.T01:CDS
ATGGAGGAAGAGGAAGGTGG+TGG 0.451779 2:-377915 None:intergenic
TGCAATACCTTGTGGAGTTA+AGG 0.453302 2:+379939 MsG0280006316.01.T01:CDS
TTTAGGTCAGCAAGTATAAG+TGG 0.454048 2:-379185 None:intergenic
TATTGTGGTGCTTGCAGAAA+AGG 0.454979 2:+379082 MsG0280006316.01.T01:CDS
GTTCAATGAAGTTCCTGAAA+AGG 0.458434 2:+382557 MsG0280006316.01.T01:CDS
TGCGGACGAAAATGCAGATC+AGG 0.458571 2:+379344 MsG0280006316.01.T01:CDS
AGGTTTACAGGAGGTTTGGG+AGG 0.459490 2:-377834 None:intergenic
TCTGCTCATTCGTGATATAC+AGG 0.460932 2:+383167 MsG0280006316.01.T01:CDS
AAGGTTGATTCACTTAGAAA+AGG 0.461974 2:+378780 MsG0280006316.01.T01:CDS
TGCCATGCTAACCAGCTCAT+TGG 0.468077 2:-383502 None:intergenic
ATTCAGTGTGCTCTGCAGCC+TGG 0.470047 2:+379638 MsG0280006316.01.T01:CDS
CTGGGTTCTCTCACAACTCA+TGG 0.470879 2:+383370 MsG0280006316.01.T01:CDS
TGTTGTAGTCGGAGCGGGGA+CGG 0.472750 2:-377872 None:intergenic
TTGAGACAGAGACGATTCTC+TGG 0.472906 2:-378692 None:intergenic
GTCTTTGTCTTCTTCAAAGG+TGG 0.473189 2:-377627 None:intergenic
GGTTGATAATAGCACGCTCT+TGG 0.476030 2:-383903 None:intergenic
ACTCCACAAGGTATTGCATC+AGG 0.476424 2:-379934 None:intergenic
TCAAATAAATAGAACTCTGC+TGG 0.479224 2:-383799 None:intergenic
TCCACCAACAAGTTTCACTA+AGG 0.479326 2:-379567 None:intergenic
AGTGTCTTTGTCTTCTTCAA+AGG 0.479615 2:-377630 None:intergenic
TGTTGGTGGTGGTGTTATTG+TGG 0.482644 2:+379067 MsG0280006316.01.T01:CDS
AATGATAACAATGGAATTGG+AGG 0.485114 2:+377696 MsG0280006316.01.T01:CDS
GGGAGGGAAATGCTGTCATT+AGG 0.491865 2:+382649 MsG0280006316.01.T01:CDS
TGAGGAATTATTTGCGGAGG+AGG 0.492037 2:+383566 MsG0280006316.01.T01:CDS
ATAACTAACAAGATAGAAGA+TGG 0.496167 2:-377975 None:intergenic
CTGCCAATGCCAAGGAAAGA+AGG 0.501340 2:-377777 None:intergenic
AAAGAAGAGAGTTGCTTACA+TGG 0.501537 2:+378482 MsG0280006316.01.T01:CDS
AGAAACCATGTACTCATCCT+TGG 0.502400 2:+378822 MsG0280006316.01.T01:CDS
TGGTGGAAGAAGTGAGGAGG+TGG 0.504581 2:-377898 None:intergenic
TGTTCTTGAGGAATTATTTG+CGG 0.504667 2:+383560 MsG0280006316.01.T01:CDS
AGATATTTGTACAATACAAA+AGG 0.505733 2:-378393 None:intergenic
GATAATAGCACGCTCTTGGT+TGG 0.505827 2:-383899 None:intergenic
GAACATAAAGCTTGTCCACC+GGG 0.509140 2:+382629 MsG0280006316.01.T01:CDS
TAATGACAGCATTTCCCTCC+CGG 0.510963 2:-382647 None:intergenic
TTTCAAGCTTACAGAATCAA+AGG 0.516141 2:-382700 None:intergenic
CATGCTGAAACAGAAGGAAC+CGG 0.517105 2:+378669 MsG0280006316.01.T01:CDS
GACAGAGACGATTCTCTGGC+CGG 0.519822 2:-378688 None:intergenic
GGTGTAAAGGAGGGCTTAAG+AGG 0.521084 2:+379506 MsG0280006316.01.T01:CDS
TTGTTTGGTGATGGAGGAAG+AGG 0.521599 2:-377925 None:intergenic
TTTGCAGGTTTCAGTTTCAA+AGG 0.521949 2:+379299 MsG0280006316.01.T01:intron
GGTTAGCATGGCACTAGCTA+TGG 0.522446 2:+383512 MsG0280006316.01.T01:CDS
GTCTCTGTCTCAATTAGTGC+GGG 0.527792 2:+378702 MsG0280006316.01.T01:CDS
AGTGCAAGTAGCTTTGCATA+AGG 0.528370 2:-378528 None:intergenic
GATTAGGGGTCGTACAAGAA+AGG 0.528516 2:+383852 MsG0280006316.01.T01:CDS
ACCATGTACTCATCCTTGGC+TGG 0.529647 2:+378826 MsG0280006316.01.T01:CDS
GGAAGGTGGTGGAAGAAGTG+AGG 0.529735 2:-377904 None:intergenic
TCTTAGCTTAGCTGGTGTAA+AGG 0.530755 2:+379493 MsG0280006316.01.T01:CDS
CTTAAGAGGGCATGTTGTTG+TGG 0.531530 2:+379520 MsG0280006316.01.T01:CDS
GGAGTTAAGGTTGCTGCAGA+TGG 0.533513 2:+379952 MsG0280006316.01.T01:CDS
ATAATAACCTGTGCAAGGCC+AGG 0.537231 2:-379656 None:intergenic
AAGCTCGAATTCGATTTCAT+GGG 0.539520 2:+379134 MsG0280006316.01.T01:CDS
AAGAAGTTGACTTTGTATCT+CGG 0.540652 2:-383338 None:intergenic
CCCAATCCCAATGATAACAA+TGG 0.542728 2:+377687 MsG0280006316.01.T01:CDS
GTTGACTTTGTATCTCGGTA+TGG 0.542760 2:-383333 None:intergenic
TTATGTATTATCCAATGAGC+TGG 0.542940 2:+383491 MsG0280006316.01.T01:CDS
TTGTTGTTGTTTGGTGATGG+AGG 0.543723 2:-377931 None:intergenic
ATCCAATGAGCTGGTTAGCA+TGG 0.544583 2:+383500 MsG0280006316.01.T01:CDS
CGAAACAAGCCCAAGCATCA+TGG 0.544799 2:-378742 None:intergenic
TTCGGATGCTATATCGGAGA+AGG 0.545084 2:+378761 MsG0280006316.01.T01:CDS
GCACCTCGAGAGTCTTCCAT+TGG 0.547151 2:+382674 MsG0280006316.01.T01:CDS
GATGATGACACTTATGCTCC+AGG 0.548929 2:+380048 MsG0280006316.01.T01:CDS
TTTCCTGATGCAATACCTTG+TGG 0.549444 2:+379931 MsG0280006316.01.T01:CDS
GAACCCTTAGTGAAACTTGT+TGG 0.552794 2:+379563 MsG0280006316.01.T01:CDS
GCAAATCAACCGTGTTCTTG+AGG 0.553682 2:+383548 MsG0280006316.01.T01:CDS
CCAATTTGTCACTCCAGCCA+AGG 0.555174 2:-378839 None:intergenic
GACGGGGATGAGGAGGAAGA+AGG 0.555736 2:-377854 None:intergenic
TCCAGCCAAGGATGAGTACA+TGG 0.556904 2:-378827 None:intergenic
AGCTTAGCTGGTGTAAAGGA+GGG 0.557700 2:+379497 MsG0280006316.01.T01:CDS
GTTAAGGTTGCTGCAGATGG+AGG 0.558391 2:+379955 MsG0280006316.01.T01:CDS
AGAGAGAAGAAACTTGCTGC+TGG 0.559189 2:+382582 MsG0280006316.01.T01:CDS
TGGACTTATGTAGCTGACGC+AGG 0.560225 2:+378642 MsG0280006316.01.T01:CDS
TTGTTATCATTGGGATTGGG+AGG 0.560797 2:-377684 None:intergenic
TGCTCCAGGCCCACTGCCAG+AGG 0.562564 2:+380062 MsG0280006316.01.T01:CDS
GCAATAGCCAATAAGAGTGT+TGG 0.565769 2:+379050 MsG0280006316.01.T01:CDS
GTAGCATGGCTGAAGCACTT+TGG 0.566874 2:+378613 MsG0280006316.01.T01:CDS
GGAGGAAGAAGGTTTACAGG+AGG 0.567299 2:-377843 None:intergenic
TAGCTTAGCTGGTGTAAAGG+AGG 0.568499 2:+379496 MsG0280006316.01.T01:CDS
AGCATAAGTGTCATCATCCT+CGG 0.571380 2:-380043 None:intergenic
CATAGAAACAGAGCTCCTCC+TGG 0.574441 2:-383822 None:intergenic
CGTCTCTGTCTCAATTAGTG+CGG 0.576293 2:+378701 MsG0280006316.01.T01:CDS
AACATCCAGAGTTCTGAACC+AGG 0.577266 2:-382537 None:intergenic
TGCGGTTACTGGCGGTAGCA+TGG 0.578720 2:+378599 MsG0280006316.01.T01:CDS
CCACCAACAAGTTTCACTAA+GGG 0.579441 2:-379566 None:intergenic
CTAGTTTGTATAGGTACACA+AGG 0.579933 2:+380600 MsG0280006316.01.T01:intron
ATAGCCAATAAGAGTGTTGG+TGG 0.580251 2:+379053 MsG0280006316.01.T01:CDS
TATACTTGCTGACCTAAAGA+AGG 0.580516 2:+379190 MsG0280006316.01.T01:CDS
CTGATTTCTCACAACAACAA+TGG 0.580629 2:+377748 MsG0280006316.01.T01:CDS
AGAGTTCTATTTATTTGACC+AGG 0.581048 2:+383804 MsG0280006316.01.T01:CDS
TATCTTCTCTGGATATTTAG+GGG 0.582060 2:-380647 None:intergenic
ACAGAATCAAAGGTCTCCAA+TGG 0.582556 2:-382690 None:intergenic
GGTGCTTGCAGAAAAGGAAA+AGG 0.582960 2:+379088 MsG0280006316.01.T01:CDS
CCCTTAGTGAAACTTGTTGG+TGG 0.584889 2:+379566 MsG0280006316.01.T01:CDS
AATGAGCAGAAGAGTAGCAA+GGG 0.586121 2:-383154 None:intergenic
GATAATTATGTTCTGAGAGA+TGG 0.589999 2:+380000 MsG0280006316.01.T01:CDS
AGAACATAAAGCTTGTCCAC+CGG 0.590018 2:+382628 MsG0280006316.01.T01:CDS
GGAAATCATGCTGAAACAGA+AGG 0.590406 2:+378663 MsG0280006316.01.T01:CDS
ATACAAACTTGCCAAACTCA+AGG 0.590597 2:+378139 MsG0280006316.01.T01:CDS
ATCTTCTCTGGATATTTAGG+GGG 0.591558 2:-380646 None:intergenic
TAACTAACAAGATAGAAGAT+GGG 0.593725 2:-377974 None:intergenic
TTCTCTTGGTCAGATATGGG+AGG 0.593900 2:+379822 MsG0280006316.01.T01:intron
TTTCTTCTGTCATTCGCCTG+AGG 0.595776 2:-383983 None:intergenic
AGGTGGTGGAAGAAGTGAGG+AGG 0.598041 2:-377901 None:intergenic
GCCAATAAGAGTGTTGGTGG+TGG 0.599916 2:+379056 MsG0280006316.01.T01:CDS
TGGAGGTGCTGCCAATGCCA+AGG 0.600631 2:-377785 None:intergenic
GAAAGATGACCTCTGGCAGT+GGG 0.604023 2:-380071 None:intergenic
TTAAGGTTGCTGCAGATGGA+GGG 0.606535 2:+379956 MsG0280006316.01.T01:CDS
GTTCTATTTATTTGACCAGG+AGG 0.607329 2:+383807 MsG0280006316.01.T01:CDS
CATCATCCTCGGCTATGACA+AGG 0.607741 2:-380032 None:intergenic
TCTGTCTCAATTAGTGCGGG+TGG 0.610747 2:+378705 MsG0280006316.01.T01:CDS
GAAACTCTGAGATTGAGAGA+AGG 0.611019 2:-377654 None:intergenic
AACAAGATAGAAGATGGGAG+AGG 0.611969 2:-377969 None:intergenic
TAGCACGCTCTTGGTTGGCG+AGG 0.612503 2:-383894 None:intergenic
ACATCTGTAATATGTAGAAG+TGG 0.612683 2:+379158 MsG0280006316.01.T01:CDS
AGCTCGAATTCGATTTCATG+GGG 0.614516 2:+379135 MsG0280006316.01.T01:CDS
TTTGCATAATAACCTGTGCA+AGG 0.614625 2:-379661 None:intergenic
TTCTATGATATAATGATTAG+GGG 0.616535 2:+383838 MsG0280006316.01.T01:CDS
TACACAAGGGCTATTTCCCT+AGG 0.621839 2:+380614 MsG0280006316.01.T01:CDS
ATAAAGCTTGTCCACCGGGA+GGG 0.622822 2:+382633 MsG0280006316.01.T01:CDS
TGATCATGTCATCAATGTCA+CGG 0.624195 2:-380687 None:intergenic
TGACATTGATGACATGATCA+TGG 0.624426 2:+380690 MsG0280006316.01.T01:CDS
GAATGAGCAGAAGAGTAGCA+AGG 0.627455 2:-383155 None:intergenic
TATTCTTGCAGATGAGTCAG+TGG 0.627905 2:+383101 MsG0280006316.01.T01:CDS
TGCCAATGCCAAGGAAAGAA+GGG 0.629280 2:-377776 None:intergenic
TTGGTGATGGAGGAAGAGGA+AGG 0.634563 2:-377921 None:intergenic
TGGTGGTTTAGCATTGTATG+CGG 0.643522 2:+378581 MsG0280006316.01.T01:CDS
GCATTGTATGCGGTTACTGG+CGG 0.645593 2:+378591 MsG0280006316.01.T01:CDS
GTGATGGAGGAAGAGGAAGG+TGG 0.646307 2:-377918 None:intergenic
GCTTGCAGAAAAGGAAAAGG+AGG 0.649760 2:+379091 MsG0280006316.01.T01:CDS
ATAATCACTTATTCTGGACA+CGG 0.651036 2:-383472 None:intergenic
CATCCAGAGTTCTGAACCAG+GGG 0.651282 2:-382535 None:intergenic
TCTTGCAGATGAGTCAGTGG+AGG 0.653454 2:+383104 MsG0280006316.01.T01:CDS
AGGGAAATGCTGTCATTAGG+CGG 0.655221 2:+382652 MsG0280006316.01.T01:CDS
CAAATAATTCCTCAAGAACA+CGG 0.655970 2:-383557 None:intergenic
GTGTAAAGGAGGGCTTAAGA+GGG 0.656066 2:+379507 MsG0280006316.01.T01:CDS
TCTTGAGGAATTATTTGCGG+AGG 0.658307 2:+383563 MsG0280006316.01.T01:CDS
GAGGAGAACAGAAAGTAACA+AGG 0.670229 2:+378446 MsG0280006316.01.T01:CDS
TCTCCAATGGAAGACTCTCG+AGG 0.672676 2:-382677 None:intergenic
TGAAGTCCTTGTCATAGCCG+AGG 0.674393 2:+380026 MsG0280006316.01.T01:CDS
GCAGCAACCTTAACTCCACA+AGG 0.678980 2:-379946 None:intergenic
CATAAAGCTTGTCCACCGGG+AGG 0.679617 2:+382632 MsG0280006316.01.T01:CDS
ACATCCAGAGTTCTGAACCA+GGG 0.682226 2:-382536 None:intergenic
TGACAGCATTTCCCTCCCGG+TGG 0.690646 2:-382644 None:intergenic
GATATGAAACTTCAACTCTG+TGG 0.711737 2:+378252 MsG0280006316.01.T01:CDS
GAGAACAGAAAGTAACAAGG+AGG 0.716342 2:+378449 MsG0280006316.01.T01:CDS
TAGTTTGTATAGGTACACAA+GGG 0.742386 2:+380601 MsG0280006316.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAATAAACTTAATAAA+GGG - Chr2:378026-378045 None:intergenic 10.0%
!! TATGAAAATAAACTTAATAA+AGG - Chr2:378027-378046 None:intergenic 10.0%
!!! AATTATAATTAGTGAAATTT+TGG + Chr2:383425-383444 MsG0280006316.01.T01:CDS 10.0%
!!! CTTAGTAAAAATAATAATTT+TGG + Chr2:380471-380490 MsG0280006316.01.T01:intron 10.0%
!! AAACAAAAAAAACAAAAAAG+AGG - Chr2:383295-383314 None:intergenic 15.0%
!! ATCAAAATGACATATAATAT+TGG + Chr2:383733-383752 MsG0280006316.01.T01:intron 15.0%
!! ATCATACTTTCATTAAAAAA+AGG + Chr2:382882-382901 MsG0280006316.01.T01:intron 15.0%
!! CAAATTATTCAAACATTAAA+TGG - Chr2:380125-380144 None:intergenic 15.0%
!! CATTTAATGTTTGAATAATT+TGG + Chr2:380123-380142 MsG0280006316.01.T01:intron 15.0%
!! GTTAAAGAACATAAAATATA+AGG - Chr2:382407-382426 None:intergenic 15.0%
!! TGATTATCATTATCAATTTA+TGG + Chr2:381298-381317 MsG0280006316.01.T01:intron 15.0%
!! TTTCTATGATATAATGATTA+GGG + Chr2:383837-383856 MsG0280006316.01.T01:CDS 15.0%
!!! AGGTTTTTGTTTATTTTATA+TGG + Chr2:383696-383715 MsG0280006316.01.T01:intron 15.0%
!!! ATTTTGTTTTTCTTTTTTTG+CGG - Chr2:382175-382194 None:intergenic 15.0%
!!! TTGTTTATTTTATATGGTTT+TGG + Chr2:383702-383721 MsG0280006316.01.T01:intron 15.0%
!!! TTTTATCAATTCAATTTCTT+TGG + Chr2:378223-378242 MsG0280006316.01.T01:intron 15.0%
!!! TTTTTCTTCTGTTTTTTTTA+GGG + Chr2:381793-381812 MsG0280006316.01.T01:intron 15.0%
!! AAAAAAAATGAAAACACTCA+TGG - Chr2:381889-381908 None:intergenic 20.0%
!! AAATCTACTAAATAATGAGT+AGG + Chr2:381435-381454 MsG0280006316.01.T01:intron 20.0%
!! AGATATTTGTACAATACAAA+AGG - Chr2:378396-378415 None:intergenic 20.0%
!! CAATAATGTAAGGATATTTA+AGG - Chr2:380742-380761 None:intergenic 20.0%
!! CTCAAATAATTAATTTCTTG+AGG + Chr2:378427-378446 MsG0280006316.01.T01:CDS 20.0%
!! CTCAAGAAATTAATTATTTG+AGG - Chr2:378429-378448 None:intergenic 20.0%
!! GTTTCTATGATATAATGATT+AGG + Chr2:383836-383855 MsG0280006316.01.T01:CDS 20.0%
!! TAATACATAATCACTTATTC+TGG - Chr2:383481-383500 None:intergenic 20.0%
!! TATTGTAAATAAGCTGAATA+GGG - Chr2:378122-378141 None:intergenic 20.0%
!! TGAATTAGAATTTGATGTTT+AGG + Chr2:378908-378927 MsG0280006316.01.T01:intron 20.0%
!! TTCATTAAATTAGTGATCAT+AGG + Chr2:380197-380216 MsG0280006316.01.T01:intron 20.0%
!! TTCTATGATATAATGATTAG+GGG + Chr2:383838-383857 MsG0280006316.01.T01:CDS 20.0%
!! TTTGTTCTTTATTCATAGAA+AGG + Chr2:379227-379246 MsG0280006316.01.T01:intron 20.0%
!!! ATTGAAAAATAACTTTTCCT+AGG - Chr2:381704-381723 None:intergenic 20.0%
!!! CTATTTTATGTTTCTTGAAA+GGG - Chr2:380808-380827 None:intergenic 20.0%
!!! GTTTTTCTTCTGTTTTTTTT+AGG + Chr2:381792-381811 MsG0280006316.01.T01:intron 20.0%
!!! TTCATTTGTTTTTTTTCTCT+TGG + Chr2:379808-379827 MsG0280006316.01.T01:intron 20.0%
! AAACATGTCATATGAAATGT+TGG - Chr2:380571-380590 None:intergenic 25.0%
! AACAACAACAAAAAAACTTC+AGG - Chr2:382214-382233 None:intergenic 25.0%
! AACACAAACAAGAAATCTAA+AGG - Chr2:378180-378199 None:intergenic 25.0%
! AAGAATATAGAAAGCTATTG+AGG - Chr2:381972-381991 None:intergenic 25.0%
! AATATCTTCTCTGGATATTT+AGG - Chr2:380652-380671 None:intergenic 25.0%
! AATCAATAATACCTTGAGTT+TGG - Chr2:378153-378172 None:intergenic 25.0%
! ACAAGAAAGGAAATTGTTAT+AGG + Chr2:383865-383884 MsG0280006316.01.T01:CDS 25.0%
! ACACAAACAAGAAATCTAAA+GGG - Chr2:378179-378198 None:intergenic 25.0%
! ACTTTCTTTCTTATAGCATT+TGG + Chr2:378561-378580 MsG0280006316.01.T01:CDS 25.0%
! AGGCAGTAATATGAAAATTT+AGG - Chr2:380722-380741 None:intergenic 25.0%
! AGTATATTGTATACACCAAA+GGG - Chr2:382429-382448 None:intergenic 25.0%
! ATAACTAACAAGATAGAAGA+TGG - Chr2:377978-377997 None:intergenic 25.0%
! ATACAAAGTCAACTTCTTTA+AGG + Chr2:383343-383362 MsG0280006316.01.T01:CDS 25.0%
! ATATCTTCTCTGGATATTTA+GGG - Chr2:380651-380670 None:intergenic 25.0%
! ATTCAAACTTCTAATACTGT+GGG + Chr2:381125-381144 MsG0280006316.01.T01:intron 25.0%
! ATTTCAGTAATGCTTAATAG+AGG - Chr2:379697-379716 None:intergenic 25.0%
! CAAATCATTGAGAAATTAGA+CGG - Chr2:381389-381408 None:intergenic 25.0%
! CATATAATTTCTTCAGATTC+AGG + Chr2:383014-383033 MsG0280006316.01.T01:intron 25.0%
! CCTTTCAAGAAACATAAAAT+AGG + Chr2:380806-380825 MsG0280006316.01.T01:intron 25.0%
! CTATTAAGCATTACTGAAAT+TGG + Chr2:379697-379716 MsG0280006316.01.T01:intron 25.0%
! GAACATAAAATATAAGGCAT+TGG - Chr2:382401-382420 None:intergenic 25.0%
! GAATAAAGAACAAAATACCA+CGG - Chr2:379221-379240 None:intergenic 25.0%
! GACATATAATATTGGAATTG+TGG + Chr2:383741-383760 MsG0280006316.01.T01:intron 25.0%
! GCAAACATAAGTTTAAATGA+AGG - Chr2:383595-383614 None:intergenic 25.0%
! GGCAGTAATATGAAAATTTA+GGG - Chr2:380721-380740 None:intergenic 25.0%
! GTATTGTAAATAAGCTGAAT+AGG - Chr2:378123-378142 None:intergenic 25.0%
! GTTCTTCATTATTTATTTGC+AGG + Chr2:379284-379303 MsG0280006316.01.T01:intron 25.0%
! TAACTAACAAGATAGAAGAT+GGG - Chr2:377977-377996 None:intergenic 25.0%
! TATCCAATTTAAAAGGCTTT+AGG - Chr2:382248-382267 None:intergenic 25.0%
! TCAAAACATCAAACATCAAA+AGG - Chr2:382271-382290 None:intergenic 25.0%
! TCAAATCAAGCTACATTTAA+AGG + Chr2:380829-380848 MsG0280006316.01.T01:intron 25.0%
! TCAACAACAAAACAACAAAA+GGG - Chr2:379389-379408 None:intergenic 25.0%
! TCAAGTCAAGCTATAAAATA+TGG - Chr2:382736-382755 None:intergenic 25.0%
! TCTTGACTACTGTATATTAA+AGG + Chr2:380853-380872 MsG0280006316.01.T01:intron 25.0%
! TGAGTAGGCAATATTAAATT+TGG + Chr2:381450-381469 MsG0280006316.01.T01:intron 25.0%
! TGCATAATAGCAATAATGTA+AGG - Chr2:380752-380771 None:intergenic 25.0%
! TTTCAGTAATGCTTAATAGA+GGG - Chr2:379696-379715 None:intergenic 25.0%
!! AAATTTAGAGCATAAGACTT+TGG + Chr2:381496-381515 MsG0280006316.01.T01:intron 25.0%
!! CCATCTTTTTATGTAAAACT+CGG - Chr2:379869-379888 None:intergenic 25.0%
!! CCTATTTTATGTTTCTTGAA+AGG - Chr2:380809-380828 None:intergenic 25.0%
!! GTTTTGTGAACTTATTTGAA+AGG + Chr2:383249-383268 MsG0280006316.01.T01:intron 25.0%
!! TAATAGTGTCTAGTTTGTAT+AGG + Chr2:380591-380610 MsG0280006316.01.T01:intron 25.0%
!! TTAGTGAAATTTTGGATTCT+AGG + Chr2:383433-383452 MsG0280006316.01.T01:CDS 25.0%
!! TTTAGATTTCTTGTTTGTGT+TGG + Chr2:378179-378198 MsG0280006316.01.T01:intron 25.0%
!! TTTTATGTTCTTTAACCCTT+TGG + Chr2:382411-382430 MsG0280006316.01.T01:intron 25.0%
!!! CAAAAGGTATCCAATTTAAA+AGG - Chr2:382255-382274 None:intergenic 25.0%
!!! GTCAAATTGATTTTTGTTCT+GGG + Chr2:378274-378293 MsG0280006316.01.T01:CDS 25.0%
AAAAACATCGATACAAGAAG+AGG + Chr2:378302-378321 MsG0280006316.01.T01:CDS 30.0%
AAAAATCTGTGCCAAGAAAA+TGG + Chr2:383932-383951 MsG0280006316.01.T01:CDS 30.0%
AAACAACAAAAACATCGTCA+AGG - Chr2:383960-383979 None:intergenic 30.0%
AACAAATGAACAGACAAACA+CGG - Chr2:379798-379817 None:intergenic 30.0%
AACAACAAAAACATCGTCAA+GGG - Chr2:383959-383978 None:intergenic 30.0%
AACTGTATACTAACTCTAAG+AGG + Chr2:383069-383088 MsG0280006316.01.T01:intron 30.0%
AATCGTTGAACCTAAAATCA+AGG - Chr2:381949-381968 None:intergenic 30.0%
AATGATAACAATGGAATTGG+AGG + Chr2:377696-377715 MsG0280006316.01.T01:CDS 30.0%
ACATCTGTAATATGTAGAAG+TGG + Chr2:379158-379177 MsG0280006316.01.T01:CDS 30.0%
ACCTAAAATCAAGGATGAAT+TGG - Chr2:381940-381959 None:intergenic 30.0%
AGAGTTCTATTTATTTGACC+AGG + Chr2:383804-383823 MsG0280006316.01.T01:CDS 30.0%
ATAATCACTTATTCTGGACA+CGG - Chr2:383475-383494 None:intergenic 30.0%
ATTAGTGTAAGCTAAGCTAA+TGG - Chr2:380893-380912 None:intergenic 30.0%
CAAATAATTCCTCAAGAACA+CGG - Chr2:383560-383579 None:intergenic 30.0%
CAACAAAAAAACTTCAGGTA+CGG - Chr2:382209-382228 None:intergenic 30.0%
CAGTATATTGTATACACCAA+AGG - Chr2:382430-382449 None:intergenic 30.0%
CATAATATTCCTATAGCATC+TGG - Chr2:381614-381633 None:intergenic 30.0%
CCAATTCCATTGTTATCATT+GGG - Chr2:377696-377715 None:intergenic 30.0%
CGTCTAATTTCTCAATGATT+TGG + Chr2:381387-381406 MsG0280006316.01.T01:intron 30.0%
CTCAGAACATAATTATCATC+TGG - Chr2:379997-380016 None:intergenic 30.0%
CTGCAAAACAATAATGATGA+AGG - Chr2:382496-382515 None:intergenic 30.0%
CTTAGCTTACACTAATCTAT+AGG + Chr2:380897-380916 MsG0280006316.01.T01:intron 30.0%
CTTGAGAATGATTACAAAGA+GGG - Chr2:381032-381051 None:intergenic 30.0%
GATTCAAACTTCTAATACTG+TGG + Chr2:381124-381143 MsG0280006316.01.T01:intron 30.0%
GTCAACAACAAAACAACAAA+AGG - Chr2:379390-379409 None:intergenic 30.0%
TAAGCAACTCTCTTCTTTAA+TGG - Chr2:378480-378499 None:intergenic 30.0%
TATCTTCTCTGGATATTTAG+GGG - Chr2:380650-380669 None:intergenic 30.0%
TCAAATAAATAGAACTCTGC+TGG - Chr2:383802-383821 None:intergenic 30.0%
TCCAATTCCATTGTTATCAT+TGG - Chr2:377697-377716 None:intergenic 30.0%
TCTTGAGAATGATTACAAAG+AGG - Chr2:381033-381052 None:intergenic 30.0%
TGTTCTTGAGGAATTATTTG+CGG + Chr2:383560-383579 MsG0280006316.01.T01:CDS 30.0%
TTAGTGTAAGCTAAGCTAAT+GGG - Chr2:380892-380911 None:intergenic 30.0%
TTATATTTGCCATGATGCTT+GGG + Chr2:378733-378752 MsG0280006316.01.T01:CDS 30.0%
TTATGATACTCTACACACAT+AGG + Chr2:380960-380979 MsG0280006316.01.T01:intron 30.0%
TTATGTATTATCCAATGAGC+TGG + Chr2:383491-383510 MsG0280006316.01.T01:CDS 30.0%
TTCTTTCTTATAGCATTTGG+TGG + Chr2:378564-378583 MsG0280006316.01.T01:CDS 30.0%
TTGAGAATGATTACAAAGAG+GGG - Chr2:381031-381050 None:intergenic 30.0%
TTGGTGTATACAATATACTG+TGG + Chr2:382430-382449 MsG0280006316.01.T01:intron 30.0%
TTTCAAGCTTACAGAATCAA+AGG - Chr2:382703-382722 None:intergenic 30.0%
! AAAAAACAAAAAAGAGGCGT+TGG - Chr2:383289-383308 None:intergenic 30.0%
! AAGAAGTTGACTTTGTATCT+CGG - Chr2:383341-383360 None:intergenic 30.0%
! AAGGTTGATTCACTTAGAAA+AGG + Chr2:378780-378799 MsG0280006316.01.T01:CDS 30.0%
! AATACATTTTTGTAGCAAGC+AGG + Chr2:380230-380249 MsG0280006316.01.T01:intron 30.0%
! AATTCAATTTCTTTGGTTCC+AGG + Chr2:378230-378249 MsG0280006316.01.T01:intron 30.0%
! ACCAATTCATCCTTGATTTT+AGG + Chr2:381936-381955 MsG0280006316.01.T01:intron 30.0%
! ATACATTTTTGTAGCAAGCA+GGG + Chr2:380231-380250 MsG0280006316.01.T01:intron 30.0%
! CCGAGTTTTACATAAAAAGA+TGG + Chr2:379866-379885 MsG0280006316.01.T01:CDS 30.0%
! GAATTTAGTTTATCTGACGA+GGG + Chr2:378930-378949 MsG0280006316.01.T01:intron 30.0%
! GATAGTGATATTTTACTGCA+GGG + Chr2:379008-379027 MsG0280006316.01.T01:intron 30.0%
! GTTTCTAAGAAAACCAATGA+GGG - Chr2:378870-378889 None:intergenic 30.0%
! TAGCTTTGCATAAGGATATA+TGG - Chr2:378523-378542 None:intergenic 30.0%
! TAGTTTGTATAGGTACACAA+GGG + Chr2:380601-380620 MsG0280006316.01.T01:intron 30.0%
! TGTTTCTAAGAAAACCAATG+AGG - Chr2:378871-378890 None:intergenic 30.0%
! TTGTTGACTAATTCTTGCAT+AGG + Chr2:379402-379421 MsG0280006316.01.T01:intron 30.0%
! TTTCTAAGAAAACCAATGAG+GGG - Chr2:378869-378888 None:intergenic 30.0%
! TTTTTCTCTTGGTCAGATAT+GGG + Chr2:379819-379838 MsG0280006316.01.T01:intron 30.0%
!! ACAATTTATTGTTTTGCCCA+GGG - Chr2:380278-380297 None:intergenic 30.0%
!! CAACTTCTTTAAGGTTATCT+GGG + Chr2:383352-383371 MsG0280006316.01.T01:CDS 30.0%
!! CTTCATCATTATTGTTTTGC+AGG + Chr2:382494-382513 MsG0280006316.01.T01:intron 30.0%
!! GAAAAGAGTATTTCATCCAA+AGG - Chr2:382059-382078 None:intergenic 30.0%
!! GATAATTATGTTCTGAGAGA+TGG + Chr2:380000-380019 MsG0280006316.01.T01:CDS 30.0%
!! GGTCAAATTGATTTTTGTTC+TGG + Chr2:378273-378292 MsG0280006316.01.T01:CDS 30.0%
!! TCAACTTCTTTAAGGTTATC+TGG + Chr2:383351-383370 MsG0280006316.01.T01:CDS 30.0%
!! TGATAGTGATATTTTACTGC+AGG + Chr2:379007-379026 MsG0280006316.01.T01:intron 30.0%
!!! ATTGATTTTTGTTCTGGGAA+TGG + Chr2:378279-378298 MsG0280006316.01.T01:CDS 30.0%
!!! TTTTTTCTCTTGGTCAGATA+TGG + Chr2:379818-379837 MsG0280006316.01.T01:intron 30.0%
AAAAGAAGATCATCCAGTTC+AGG - Chr2:379892-379911 None:intergenic 35.0%
AAACTTCAGGTACGGTAAAT+TGG - Chr2:382201-382220 None:intergenic 35.0%
AAAGAAGAGAGTTGCTTACA+TGG + Chr2:378482-378501 MsG0280006316.01.T01:CDS 35.0%
AAAGCTCGAATTCGATTTCA+TGG + Chr2:379133-379152 MsG0280006316.01.T01:CDS 35.0%
AAGCTCGAATTCGATTTCAT+GGG + Chr2:379134-379153 MsG0280006316.01.T01:CDS 35.0%
AAGTTTAGGTAACTGGAAAC+CGG - Chr2:379766-379785 None:intergenic 35.0%
AATTCACTACCAGATGCTAT+AGG + Chr2:381602-381621 MsG0280006316.01.T01:intron 35.0%
ACACACATAGGATATTAGTG+AGG + Chr2:380972-380991 MsG0280006316.01.T01:intron 35.0%
ACATAATGCACTCAGATGAA+TGG - Chr2:378956-378975 None:intergenic 35.0%
AGAAAAGGAAAAGGAGGAAA+TGG + Chr2:379097-379116 MsG0280006316.01.T01:CDS 35.0%
AGAGTTGAAGTTTCATATCC+TGG - Chr2:378251-378270 None:intergenic 35.0%
AGCATTACTGAAATTGGTAG+TGG + Chr2:379703-379722 MsG0280006316.01.T01:intron 35.0%
AGGACAGTTAAACTAAGCAA+CGG + Chr2:383034-383053 MsG0280006316.01.T01:intron 35.0%
AGTATTTCATCCAAAGGTTG+TGG - Chr2:382053-382072 None:intergenic 35.0%
AGTGTCTTTGTCTTCTTCAA+AGG - Chr2:377633-377652 None:intergenic 35.0%
ATACAAACTTGCCAAACTCA+AGG + Chr2:378139-378158 MsG0280006316.01.T01:CDS 35.0%
ATATGTCACCAAACAACACA+GGG + Chr2:381328-381347 MsG0280006316.01.T01:intron 35.0%
ATCACAAATCCATTCCATGT+AGG - Chr2:381282-381301 None:intergenic 35.0%
ATCTTCTCTGGATATTTAGG+GGG - Chr2:380649-380668 None:intergenic 35.0%
ATTAGTGAGGTTCATCCTAT+TGG + Chr2:380985-381004 MsG0280006316.01.T01:intron 35.0%
ATTAGTGATCATAGGTGACT+TGG + Chr2:380205-380224 MsG0280006316.01.T01:intron 35.0%
ATTGATCTACTATGCCTACA+TGG + Chr2:381265-381284 MsG0280006316.01.T01:intron 35.0%
ATTGGATGTAGAAAGGCTAT+AGG + Chr2:381534-381553 MsG0280006316.01.T01:intron 35.0%
CAACAGTATAGATTCTCTCT+AGG + Chr2:381097-381116 MsG0280006316.01.T01:intron 35.0%
CCACAAAACAATATCTTCTC+TGG - Chr2:380661-380680 None:intergenic 35.0%
CCATTGTTATCATTGGGATT+GGG - Chr2:377690-377709 None:intergenic 35.0%
CCCAATGATAACAATGGAAT+TGG + Chr2:377693-377712 MsG0280006316.01.T01:CDS 35.0%
CTGATTTCTCACAACAACAA+TGG + Chr2:377748-377767 MsG0280006316.01.T01:CDS 35.0%
CTTATATTTGCCATGATGCT+TGG + Chr2:378732-378751 MsG0280006316.01.T01:CDS 35.0%
GATATGAAACTTCAACTCTG+TGG + Chr2:378252-378271 MsG0280006316.01.T01:CDS 35.0%
GTATTTCATCCAAAGGTTGT+GGG - Chr2:382052-382071 None:intergenic 35.0%
GTTCAATGAAGTTCCTGAAA+AGG + Chr2:382557-382576 MsG0280006316.01.T01:CDS 35.0%
GTTCTATTTATTTGACCAGG+AGG + Chr2:383807-383826 MsG0280006316.01.T01:CDS 35.0%
GTTGTTGCACATGATGTAAT+TGG + Chr2:379605-379624 MsG0280006316.01.T01:CDS 35.0%
TAAATGGATCCAATGCTGAA+AGG - Chr2:380109-380128 None:intergenic 35.0%
TATGGACTTAATGACTTCAC+CGG + Chr2:379735-379754 MsG0280006316.01.T01:intron 35.0%
TCAAACTCTGAACATTCACT+TGG - Chr2:382789-382808 None:intergenic 35.0%
TCACATGAATCTTATGTGCT+TGG - Chr2:381227-381246 None:intergenic 35.0%
TCACTAAGGGTTCATTATCA+AGG - Chr2:379556-379575 None:intergenic 35.0%
TCCATTGTTATCATTGGGAT+TGG - Chr2:377691-377710 None:intergenic 35.0%
TGATACCAAGTTTAGGTAAC+TGG - Chr2:379773-379792 None:intergenic 35.0%
TGATCATGTCATCAATGTCA+CGG - Chr2:380690-380709 None:intergenic 35.0%
TTAGTGAGGTTCATCCTATT+GGG + Chr2:380986-381005 MsG0280006316.01.T01:intron 35.0%
TTAGTGATCATAGGTGACTT+GGG + Chr2:380206-380225 MsG0280006316.01.T01:intron 35.0%
TTTAGGTCAGCAAGTATAAG+TGG - Chr2:379188-379207 None:intergenic 35.0%
TTTGCAGGTTTCAGTTTCAA+AGG + Chr2:379299-379318 MsG0280006316.01.T01:intron 35.0%
TTTGCATAATAACCTGTGCA+AGG - Chr2:379664-379683 None:intergenic 35.0%
! AATTGGTGATAAGGCACAAT+TGG - Chr2:381923-381942 None:intergenic 35.0%
! AGGTGTTTGTCTTCTTTTTC+TGG - Chr2:377808-377827 None:intergenic 35.0%
! AGTGTGTTGTTGTTGTTGTT+TGG - Chr2:377943-377962 None:intergenic 35.0%
! ATAAGACTTTGGAAGTGTGA+GGG + Chr2:381507-381526 MsG0280006316.01.T01:intron 35.0%
! ATTTCTTGTTTGTGTTGGAC+TGG + Chr2:378184-378203 MsG0280006316.01.T01:intron 35.0%
! CTAGTTTGTATAGGTACACA+AGG + Chr2:380600-380619 MsG0280006316.01.T01:intron 35.0%
! GCACCTAAAGCCTTTTAAAT+TGG + Chr2:382242-382261 MsG0280006316.01.T01:intron 35.0%
! GGAATTTAGTTTATCTGACG+AGG + Chr2:378929-378948 MsG0280006316.01.T01:intron 35.0%
! GTATATCTAGCGCATTTTCT+TGG + Chr2:380173-380192 MsG0280006316.01.T01:intron 35.0%
! TATACTTGCTGACCTAAAGA+AGG + Chr2:379190-379209 MsG0280006316.01.T01:CDS 35.0%
! TCAAGGATGAATTGGTGATA+AGG - Chr2:381932-381951 None:intergenic 35.0%
! TGACATTGATGACATGATCA+TGG + Chr2:380690-380709 MsG0280006316.01.T01:CDS 35.0%
! TGTTTGTCTTCTTTTTCTGG+AGG - Chr2:377805-377824 None:intergenic 35.0%
! TTCTTCTCTCTTTCCTTTTC+AGG - Chr2:382573-382592 None:intergenic 35.0%
! TTGGCACAGATTTTTCTGAA+GGG - Chr2:383927-383946 None:intergenic 35.0%
!! AGAAGATATTGTTTTGTGGC+TGG + Chr2:380662-380681 MsG0280006316.01.T01:CDS 35.0%
!! CACAATTTATTGTTTTGCCC+AGG - Chr2:380279-380298 None:intergenic 35.0%
!! CCAGAGAAGATATTGTTTTG+TGG + Chr2:380658-380677 MsG0280006316.01.T01:CDS 35.0%
!! CTGCTAGTTTAGCATTTTTG+AGG + Chr2:383676-383695 MsG0280006316.01.T01:intron 35.0%
!! TTGTTGTTGTTGTTTGGTGA+TGG - Chr2:377937-377956 None:intergenic 35.0%
!!! GTTTTTGTTGTTTTAGCCTC+AGG + Chr2:383967-383986 MsG0280006316.01.T01:CDS 35.0%
!!! TGCAATCATTGTTTTAGCTG+CGG + Chr2:379326-379345 MsG0280006316.01.T01:CDS 35.0%
!!! TTTCTTTTTTTGCGGCCTAT+AGG - Chr2:382167-382186 None:intergenic 35.0%
AACAAGATAGAAGATGGGAG+AGG - Chr2:377972-377991 None:intergenic 40.0%
AAGAAGGTTTACAGGAGGTT+TGG - Chr2:377841-377860 None:intergenic 40.0%
AATCTCTCTGTAGACATCGT+AGG + Chr2:381353-381372 MsG0280006316.01.T01:intron 40.0%
AATGAGCAGAAGAGTAGCAA+GGG - Chr2:383157-383176 None:intergenic 40.0%
ACACTCTCGAAGGTTGTATT+TGG + Chr2:381175-381194 MsG0280006316.01.T01:intron 40.0%
ACAGAATCAAAGGTCTCCAA+TGG - Chr2:382693-382712 None:intergenic 40.0%
ACCAAAGTGCATGTTGAAGT+AGG + Chr2:382980-382999 MsG0280006316.01.T01:intron 40.0%
ACTGATATGAAATGCAGCAG+CGG - Chr2:383196-383215 None:intergenic 40.0%
AGAAACCATGTACTCATCCT+TGG + Chr2:378822-378841 MsG0280006316.01.T01:CDS 40.0%
AGAACATAAAGCTTGTCCAC+CGG + Chr2:382628-382647 MsG0280006316.01.T01:CDS 40.0%
AGAAGGTTTACAGGAGGTTT+GGG - Chr2:377840-377859 None:intergenic 40.0%
AGAGTTGTTCTTAGCTTAGC+TGG + Chr2:379485-379504 MsG0280006316.01.T01:CDS 40.0%
AGCATAAGTGTCATCATCCT+CGG - Chr2:380046-380065 None:intergenic 40.0%
AGCTCGAATTCGATTTCATG+GGG + Chr2:379135-379154 MsG0280006316.01.T01:CDS 40.0%
ATAGGAACGCTGTTTGGTTA+GGG - Chr2:382149-382168 None:intergenic 40.0%
ATTAAATCACCAGTTTGCGG+AGG - Chr2:382126-382145 None:intergenic 40.0%
CACGGTATGATACCAAGTTT+AGG - Chr2:379780-379799 None:intergenic 40.0%
CATAAAAAGATGGCCTGAAC+TGG + Chr2:379876-379895 MsG0280006316.01.T01:CDS 40.0%
CCACCAACAAGTTTCACTAA+GGG - Chr2:379569-379588 None:intergenic 40.0%
CCAGGGAAACAAGAATCTTA+GGG - Chr2:380261-380280 None:intergenic 40.0%
CCCAATCCCAATGATAACAA+TGG + Chr2:377687-377706 MsG0280006316.01.T01:CDS 40.0%
CCTATTGGGGAATCTAGAAA+TGG + Chr2:381000-381019 MsG0280006316.01.T01:intron 40.0%
CTGACTCATCTGCAAGAATA+AGG - Chr2:383101-383120 None:intergenic 40.0%
GAACCCTTAGTGAAACTTGT+TGG + Chr2:379563-379582 MsG0280006316.01.T01:CDS 40.0%
GAGAACAGAAAGTAACAAGG+AGG + Chr2:378449-378468 MsG0280006316.01.T01:CDS 40.0%
GAGGAGAACAGAAAGTAACA+AGG + Chr2:378446-378465 MsG0280006316.01.T01:CDS 40.0%
GATATGTCACCAAACAACAC+AGG + Chr2:381327-381346 MsG0280006316.01.T01:intron 40.0%
GCTTGTTTCGGATGCTATAT+CGG + Chr2:378755-378774 MsG0280006316.01.T01:CDS 40.0%
GGAAAAGGAGGAAATGGAAA+TGG + Chr2:379103-379122 MsG0280006316.01.T01:CDS 40.0%
GGAAATCATGCTGAAACAGA+AGG + Chr2:378663-378682 MsG0280006316.01.T01:CDS 40.0%
GGGATAGATTGGATGTAGAA+AGG + Chr2:381527-381546 MsG0280006316.01.T01:intron 40.0%
GGGATTAAATCACCAGTTTG+CGG - Chr2:382129-382148 None:intergenic 40.0%
GGTTTCCAGTTACCTAAACT+TGG + Chr2:379765-379784 MsG0280006316.01.T01:intron 40.0%
GTCTTTGTCTTCTTCAAAGG+TGG - Chr2:377630-377649 None:intergenic 40.0%
TAACCAAACAGCGTTCCTAT+AGG + Chr2:382149-382168 MsG0280006316.01.T01:intron 40.0%
TAGAACAGAAAGATGACCTC+TGG - Chr2:380081-380100 None:intergenic 40.0%
TAGTGAGGTTCATCCTATTG+GGG + Chr2:380987-381006 MsG0280006316.01.T01:intron 40.0%
TATAGGAACGCTGTTTGGTT+AGG - Chr2:382150-382169 None:intergenic 40.0%
TATTCTTGCAGATGAGTCAG+TGG + Chr2:383101-383120 MsG0280006316.01.T01:CDS 40.0%
TATTGTGGTGCTTGCAGAAA+AGG + Chr2:379082-379101 MsG0280006316.01.T01:CDS 40.0%
TCCACCAACAAGTTTCACTA+AGG - Chr2:379570-379589 None:intergenic 40.0%
TCCTACTTCAACATGCACTT+TGG - Chr2:382984-383003 None:intergenic 40.0%
TCTACTATGCCTACATGGAA+TGG + Chr2:381270-381289 MsG0280006316.01.T01:intron 40.0%
TCTGAACATTCACTTGGACA+TGG - Chr2:382783-382802 None:intergenic 40.0%
TCTGCTCATTCGTGATATAC+AGG + Chr2:383167-383186 MsG0280006316.01.T01:CDS 40.0%
TCTTAGCTTAGCTGGTGTAA+AGG + Chr2:379493-379512 MsG0280006316.01.T01:CDS 40.0%
TCTTGAGGAATTATTTGCGG+AGG + Chr2:383563-383582 MsG0280006316.01.T01:CDS 40.0%
TGCAATACCTTGTGGAGTTA+AGG + Chr2:379939-379958 MsG0280006316.01.T01:CDS 40.0%
TGGTGGTTTAGCATTGTATG+CGG + Chr2:378581-378600 MsG0280006316.01.T01:CDS 40.0%
TTAGCATTGTATGCGGTTAC+TGG + Chr2:378588-378607 MsG0280006316.01.T01:CDS 40.0%
TTGGAATTGTGGTGCACTTA+TGG + Chr2:383752-383771 MsG0280006316.01.T01:intron 40.0%
TTGTTATCATTGGGATTGGG+AGG - Chr2:377687-377706 None:intergenic 40.0%
TTTCCTGATGCAATACCTTG+TGG + Chr2:379931-379950 MsG0280006316.01.T01:CDS 40.0%
! AGTGCAAGTAGCTTTGCATA+AGG - Chr2:378531-378550 None:intergenic 40.0%
! CAAATTGGTAATCCCCTCAT+TGG + Chr2:378854-378873 MsG0280006316.01.T01:intron 40.0%
! CATAAGACTTTGGAAGTGTG+AGG + Chr2:381506-381525 MsG0280006316.01.T01:intron 40.0%
! CCATTTCTAGATTCCCCAAT+AGG - Chr2:381003-381022 None:intergenic 40.0%
! CCTAAGATTCTTGTTTCCCT+GGG + Chr2:380259-380278 MsG0280006316.01.T01:intron 40.0%
! CTGGTAGTGAATTGAGGTTT+AGG - Chr2:381595-381614 None:intergenic 40.0%
! CTTGGCACAGATTTTTCTGA+AGG - Chr2:383928-383947 None:intergenic 40.0%
! GAGATTATCCCTGTGTTGTT+TGG - Chr2:381339-381358 None:intergenic 40.0%
! GCAATAGCCAATAAGAGTGT+TGG + Chr2:379050-379069 MsG0280006316.01.T01:CDS 40.0%
! GTTGACTTTGTATCTCGGTA+TGG - Chr2:383336-383355 None:intergenic 40.0%
! TAGCATCTGGTAGTGAATTG+AGG - Chr2:381601-381620 None:intergenic 40.0%
!! AACAAAAAAGAGGCGTTGGA+TGG - Chr2:383285-383304 None:intergenic 40.0%
!! ACAAAAAAGAGGCGTTGGAT+GGG - Chr2:383284-383303 None:intergenic 40.0%
!! ATAGCCAATAAGAGTGTTGG+TGG + Chr2:379053-379072 MsG0280006316.01.T01:CDS 40.0%
!! GAAACTCTGAGATTGAGAGA+AGG - Chr2:377657-377676 None:intergenic 40.0%
!! TGGTAGTGGCTCAAATGTTA+TGG + Chr2:379717-379736 MsG0280006316.01.T01:intron 40.0%
!! TTGAGTTTTGACACTCTCGA+AGG + Chr2:381165-381184 MsG0280006316.01.T01:intron 40.0%
!! TTGTTGTTGTTTGGTGATGG+AGG - Chr2:377934-377953 None:intergenic 40.0%
!!! GCAGGTTTTAGAAGCATTCT+TGG + Chr2:382512-382531 MsG0280006316.01.T01:intron 40.0%
!!! TTTTGGTGCCCCTAAAACAA+TGG + Chr2:380488-380507 MsG0280006316.01.T01:intron 40.0%
AATGACTGCCTCCATGTAAC+TGG + Chr2:382916-382935 MsG0280006316.01.T01:intron 45.0%
AATGACTTCACCGGTACATC+CGG + Chr2:379744-379763 MsG0280006316.01.T01:intron 45.0%
AATTGTGGTGCACTTATGGC+AGG + Chr2:383756-383775 MsG0280006316.01.T01:intron 45.0%
ACCACCACCAACACTCTTAT+TGG - Chr2:379060-379079 None:intergenic 45.0%
ACCACGGCAATACCTTCTTT+AGG - Chr2:379205-379224 None:intergenic 45.0%
AGCTTAGCTGGTGTAAAGGA+GGG + Chr2:379497-379516 MsG0280006316.01.T01:CDS 45.0%
AGGGAAATGCTGTCATTAGG+CGG + Chr2:382652-382671 MsG0280006316.01.T01:CDS 45.0%
ATAATAACCTGTGCAAGGCC+AGG - Chr2:379659-379678 None:intergenic 45.0%
ATCCAATGAGCTGGTTAGCA+TGG + Chr2:383500-383519 MsG0280006316.01.T01:CDS 45.0%
ATTGTGGTGCACTTATGGCA+GGG + Chr2:383757-383776 MsG0280006316.01.T01:intron 45.0%
CAGATATGGGAGGACATTCT+AGG + Chr2:379832-379851 MsG0280006316.01.T01:intron 45.0%
CATGCTGAAACAGAAGGAAC+CGG + Chr2:378669-378688 MsG0280006316.01.T01:CDS 45.0%
CCCAGGGAAACAAGAATCTT+AGG - Chr2:380262-380281 None:intergenic 45.0%
CGTCTCTGTCTCAATTAGTG+CGG + Chr2:378701-378720 MsG0280006316.01.T01:CDS 45.0%
CTAGCGAGAGACTTGAATGA+CGG - Chr2:381659-381678 None:intergenic 45.0%
GAACATAAAGCTTGTCCACC+GGG + Chr2:382629-382648 MsG0280006316.01.T01:CDS 45.0%
GAATGAGCAGAAGAGTAGCA+AGG - Chr2:383158-383177 None:intergenic 45.0%
GATAATAGCACGCTCTTGGT+TGG - Chr2:383902-383921 None:intergenic 45.0%
GATGATGACACTTATGCTCC+AGG + Chr2:380048-380067 MsG0280006316.01.T01:CDS 45.0%
GATTAGGGGTCGTACAAGAA+AGG + Chr2:383852-383871 MsG0280006316.01.T01:CDS 45.0%
GCAAATCAACCGTGTTCTTG+AGG + Chr2:383548-383567 MsG0280006316.01.T01:CDS 45.0%
GCTGGTGAACTTGACGTATT+TGG + Chr2:382600-382619 MsG0280006316.01.T01:CDS 45.0%
GCTTGCAGAAAAGGAAAAGG+AGG + Chr2:379091-379110 MsG0280006316.01.T01:CDS 45.0%
GGAAACAAGAATCTTAGGGC+CGG - Chr2:380257-380276 None:intergenic 45.0%
GGATGTAGAAAGGCTATAGG+CGG + Chr2:381537-381556 MsG0280006316.01.T01:intron 45.0%
GGTGCTTGCAGAAAAGGAAA+AGG + Chr2:379088-379107 MsG0280006316.01.T01:CDS 45.0%
GTCATTCAAGTCTCTCGCTA+GGG + Chr2:381658-381677 MsG0280006316.01.T01:intron 45.0%
GTCTCTGTCTCAATTAGTGC+GGG + Chr2:378702-378721 MsG0280006316.01.T01:CDS 45.0%
GTGAATTGAGGTTTAGGCTG+AGG - Chr2:381589-381608 None:intergenic 45.0%
GTGTAAAGGAGGGCTTAAGA+GGG + Chr2:379507-379526 MsG0280006316.01.T01:CDS 45.0%
TAACTGGAAACCGGATGTAC+CGG - Chr2:379757-379776 None:intergenic 45.0%
TAATGACAGCATTTCCCTCC+CGG - Chr2:382650-382669 None:intergenic 45.0%
TACCCTTCTTTCCTTGGCAT+TGG + Chr2:377774-377793 MsG0280006316.01.T01:CDS 45.0%
TAGCTTAGCTGGTGTAAAGG+AGG + Chr2:379496-379515 MsG0280006316.01.T01:CDS 45.0%
TCATTCAAGTCTCTCGCTAG+GGG + Chr2:381659-381678 MsG0280006316.01.T01:intron 45.0%
TCCATCAACTAGACGAGAAG+CGG - Chr2:383617-383636 None:intergenic 45.0%
TGAGGAATTATTTGCGGAGG+AGG + Chr2:383566-383585 MsG0280006316.01.T01:CDS 45.0%
TGAGGAGGAAGAAGGTTTAC+AGG - Chr2:377849-377868 None:intergenic 45.0%
TGCCAATGCCAAGGAAAGAA+GGG - Chr2:377779-377798 None:intergenic 45.0%
TGGAACTACCCTTCTTTCCT+TGG + Chr2:377768-377787 MsG0280006316.01.T01:CDS 45.0%
TGTTTACTCGGGTCTTTCCT+AGG + Chr2:381684-381703 MsG0280006316.01.T01:intron 45.0%
TTAAGGTTGCTGCAGATGGA+GGG + Chr2:379956-379975 MsG0280006316.01.T01:CDS 45.0%
TTCGGATGCTATATCGGAGA+AGG + Chr2:378761-378780 MsG0280006316.01.T01:CDS 45.0%
TTCTCAGTCAGTGTTCTCCT+CGG + Chr2:379431-379450 MsG0280006316.01.T01:intron 45.0%
TTCTCTTGGTCAGATATGGG+AGG + Chr2:379822-379841 MsG0280006316.01.T01:intron 45.0%
TTGAGACAGAGACGATTCTC+TGG - Chr2:378695-378714 None:intergenic 45.0%
! ATTTTTGTAGCAAGCAGGGC+CGG + Chr2:380235-380254 MsG0280006316.01.T01:intron 45.0%
! CATGATGCTTGGGCTTGTTT+CGG + Chr2:378743-378762 MsG0280006316.01.T01:CDS 45.0%
! CCCTAAGATTCTTGTTTCCC+TGG + Chr2:380258-380277 MsG0280006316.01.T01:intron 45.0%
! CTGAAGCACTTTGGCATTCT+TGG + Chr2:378622-378641 MsG0280006316.01.T01:CDS 45.0%
! CTTAAGAGGGCATGTTGTTG+TGG + Chr2:379520-379539 MsG0280006316.01.T01:CDS 45.0%
! TACACAAGGGCTATTTCCCT+AGG + Chr2:380614-380633 MsG0280006316.01.T01:CDS 45.0%
! TCGCTAGGGGTTTGTTTACT+CGG + Chr2:381672-381691 MsG0280006316.01.T01:intron 45.0%
! TCGTCAAGGGACCATTTTCT+TGG - Chr2:383946-383965 None:intergenic 45.0%
! TGGAAGTGTGAGGGATAGAT+TGG + Chr2:381516-381535 MsG0280006316.01.T01:intron 45.0%
!! AACATCCAGAGTTCTGAACC+AGG - Chr2:382540-382559 None:intergenic 45.0%
!! AATGTTGGCTTCTTGCTACC+AGG - Chr2:380556-380575 None:intergenic 45.0%
!! ACATCCAGAGTTCTGAACCA+GGG - Chr2:382539-382558 None:intergenic 45.0%
!! ACCTAAAGAAGGTATTGCCG+TGG + Chr2:379201-379220 MsG0280006316.01.T01:intron 45.0%
!! ACTCCACAAGGTATTGCATC+AGG - Chr2:379937-379956 None:intergenic 45.0%
!! AGAGAGAAGAAACTTGCTGC+TGG + Chr2:382582-382601 MsG0280006316.01.T01:CDS 45.0%
!! ATAAGGCATTGGTCGAGTCT+AGG - Chr2:382390-382409 None:intergenic 45.0%
!! ATGTTGGCTTCTTGCTACCA+GGG - Chr2:380555-380574 None:intergenic 45.0%
!! CAAAAAAGAGGCGTTGGATG+GGG - Chr2:383283-383302 None:intergenic 45.0%
!! CCCTTAGTGAAACTTGTTGG+TGG + Chr2:379566-379585 MsG0280006316.01.T01:CDS 45.0%
!! GGTTGATAATAGCACGCTCT+TGG - Chr2:383906-383925 None:intergenic 45.0%
!! TCTAGCTAGCCTTTCAGCAT+TGG + Chr2:380097-380116 MsG0280006316.01.T01:intron 45.0%
!! TGTTGGTGGTGGTGTTATTG+TGG + Chr2:379067-379086 MsG0280006316.01.T01:CDS 45.0%
!! TTGTTTGGTGATGGAGGAAG+AGG - Chr2:377928-377947 None:intergenic 45.0%
!!! GGAGGTGGTTTTGTTGTAGT+CGG - Chr2:377886-377905 None:intergenic 45.0%
!!! TGGTTTTGTTGTAGTCGGAG+CGG - Chr2:377881-377900 None:intergenic 45.0%
!! AAAATATTTGAATAATTAAA+AGG - Chr2:380303-380322 None:intergenic 5.0%
!! AAATATTTGAATAATTAAAA+GGG - Chr2:380302-380321 None:intergenic 5.0%
!! TTGATAAAAAAAAAAAATAA+TGG - Chr2:378212-378231 None:intergenic 5.0%
ACCATGTACTCATCCTTGGC+TGG + Chr2:378826-378845 MsG0280006316.01.T01:CDS 50.0%
AGAAAGATGACCTCTGGCAG+TGG - Chr2:380075-380094 None:intergenic 50.0%
AGGTTTACAGGAGGTTTGGG+AGG - Chr2:377837-377856 None:intergenic 50.0%
ATAAAGCTTGTCCACCGGGA+GGG + Chr2:382633-382652 MsG0280006316.01.T01:CDS 50.0%
CATAGAAACAGAGCTCCTCC+TGG - Chr2:383825-383844 None:intergenic 50.0%
CATCATCCTCGGCTATGACA+AGG - Chr2:380035-380054 None:intergenic 50.0%
CCAATTTGTCACTCCAGCCA+AGG - Chr2:378842-378861 None:intergenic 50.0%
CCCTAAAACAATGGTGCCCT+GGG + Chr2:380497-380516 MsG0280006316.01.T01:intron 50.0%
CCTTGGCTGGAGTGACAAAT+TGG + Chr2:378839-378858 MsG0280006316.01.T01:CDS 50.0%
CGAAACAAGCCCAAGCATCA+TGG - Chr2:378745-378764 None:intergenic 50.0%
CGTCATTCAAGTCTCTCGCT+AGG + Chr2:381657-381676 MsG0280006316.01.T01:intron 50.0%
CTGCCAATGCCAAGGAAAGA+AGG - Chr2:377780-377799 None:intergenic 50.0%
CTGGGTTCTCTCACAACTCA+TGG + Chr2:383370-383389 MsG0280006316.01.T01:CDS 50.0%
GAAAGATGACCTCTGGCAGT+GGG - Chr2:380074-380093 None:intergenic 50.0%
GCAGCAACCTTAACTCCACA+AGG - Chr2:379949-379968 None:intergenic 50.0%
GCATTGTATGCGGTTACTGG+CGG + Chr2:378591-378610 MsG0280006316.01.T01:CDS 50.0%
GGAGGAAGAAGGTTTACAGG+AGG - Chr2:377846-377865 None:intergenic 50.0%
GGAGTTAAGGTTGCTGCAGA+TGG + Chr2:379952-379971 MsG0280006316.01.T01:CDS 50.0%
GGGAGGGAAATGCTGTCATT+AGG + Chr2:382649-382668 MsG0280006316.01.T01:CDS 50.0%
GGTGTAAAGGAGGGCTTAAG+AGG + Chr2:379506-379525 MsG0280006316.01.T01:CDS 50.0%
GGTTAGCATGGCACTAGCTA+TGG + Chr2:383512-383531 MsG0280006316.01.T01:CDS 50.0%
GTTAAGGTTGCTGCAGATGG+AGG + Chr2:379955-379974 MsG0280006316.01.T01:CDS 50.0%
TAGGGGGATCACGTATCCTA+GGG - Chr2:380633-380652 None:intergenic 50.0%
TCAAAGCACGTGCATCACTC+TGG - Chr2:379466-379485 None:intergenic 50.0%
TCATCCAAAGGTTGTGGGCT+TGG - Chr2:382047-382066 None:intergenic 50.0%
TCCAGCCAAGGATGAGTACA+TGG - Chr2:378830-378849 None:intergenic 50.0%
TCTCCAATGGAAGACTCTCG+AGG - Chr2:382680-382699 None:intergenic 50.0%
TCTGTCTCAATTAGTGCGGG+TGG + Chr2:378705-378724 MsG0280006316.01.T01:CDS 50.0%
TCTTGCAGATGAGTCAGTGG+AGG + Chr2:383104-383123 MsG0280006316.01.T01:CDS 50.0%
TGAAGTCCTTGTCATAGCCG+AGG + Chr2:380026-380045 MsG0280006316.01.T01:CDS 50.0%
TGCCATGCTAACCAGCTCAT+TGG - Chr2:383505-383524 None:intergenic 50.0%
TGCGGACGAAAATGCAGATC+AGG + Chr2:379344-379363 MsG0280006316.01.T01:CDS 50.0%
TGGACTTATGTAGCTGACGC+AGG + Chr2:378642-378661 MsG0280006316.01.T01:CDS 50.0%
TTAGGGGGATCACGTATCCT+AGG - Chr2:380634-380653 None:intergenic 50.0%
TTTACAGGAGGTTTGGGAGG+AGG - Chr2:377834-377853 None:intergenic 50.0%
! CACTCTGGAGACAAATTCCG+AGG - Chr2:379451-379470 None:intergenic 50.0%
! CGCTAGGGGTTTGTTTACTC+GGG + Chr2:381673-381692 MsG0280006316.01.T01:intron 50.0%
! GCTCACAAAGTGCTTCCAGT+CGG + Chr2:382093-382112 MsG0280006316.01.T01:intron 50.0%
! GTAGCATGGCTGAAGCACTT+TGG + Chr2:378613-378632 MsG0280006316.01.T01:CDS 50.0%
!! CATCCAGAGTTCTGAACCAG+GGG - Chr2:382538-382557 None:intergenic 50.0%
!! CCCAGGGCACCATTGTTTTA+GGG - Chr2:380500-380519 None:intergenic 50.0%
!! CTGAAGCTTGCTGCATTTCG+CGG - Chr2:383398-383417 None:intergenic 50.0%
!! GCCAATAAGAGTGTTGGTGG+TGG + Chr2:379056-379075 MsG0280006316.01.T01:CDS 50.0%
!! GTTTTGTTGTAGTCGGAGCG+GGG - Chr2:377879-377898 None:intergenic 50.0%
!! TGTTGGCTTCTTGCTACCAG+GGG - Chr2:380554-380573 None:intergenic 50.0%
!! TTAGAAGCATTCTTGGCCCC+TGG + Chr2:382519-382538 MsG0280006316.01.T01:CDS 50.0%
!! TTGGTGATGGAGGAAGAGGA+AGG - Chr2:377924-377943 None:intergenic 50.0%
!!! CCAGGGCACCATTGTTTTAG+GGG - Chr2:380499-380518 None:intergenic 50.0%
!!! GGTTTTGTTGTAGTCGGAGC+GGG - Chr2:377880-377899 None:intergenic 50.0%
ATGGAGGAAGAGGAAGGTGG+TGG - Chr2:377918-377937 None:intergenic 55.0%
ATTCAGTGTGCTCTGCAGCC+TGG + Chr2:379638-379657 MsG0280006316.01.T01:CDS 55.0%
CATAAAGCTTGTCCACCGGG+AGG + Chr2:382632-382651 MsG0280006316.01.T01:CDS 55.0%
CCCCTAAAACAATGGTGCCC+TGG + Chr2:380496-380515 MsG0280006316.01.T01:intron 55.0%
CGGCCTATAGGAACGCTGTT+TGG - Chr2:382155-382174 None:intergenic 55.0%
GACAGAGACGATTCTCTGGC+CGG - Chr2:378691-378710 None:intergenic 55.0%
GACTGCCTCCATGTAACTGG+TGG + Chr2:382919-382938 MsG0280006316.01.T01:intron 55.0%
GCACCTCGAGAGTCTTCCAT+TGG + Chr2:382674-382693 MsG0280006316.01.T01:CDS 55.0%
GCCGCTTCTCGTCTAGTTGA+TGG + Chr2:383613-383632 MsG0280006316.01.T01:intron 55.0%
GCCTCCATGTAACTGGTGGA+CGG + Chr2:382923-382942 MsG0280006316.01.T01:intron 55.0%
GTCTCCAAGCCCACAACCTT+TGG + Chr2:382040-382059 MsG0280006316.01.T01:intron 55.0%
TGGTGGAAGAAGTGAGGAGG+TGG - Chr2:377901-377920 None:intergenic 55.0%
TGTCCCGTCCACCAGTTACA+TGG - Chr2:382930-382949 None:intergenic 55.0%
TTGTGAGCCAGGCAATGACG+CGG - Chr2:382081-382100 None:intergenic 55.0%
! CCTCCATGTAACTGGTGGAC+GGG + Chr2:382924-382943 MsG0280006316.01.T01:intron 55.0%
! CTCTTTTCCGCGTCATTGCC+TGG + Chr2:382071-382090 MsG0280006316.01.T01:intron 55.0%
! GGTTTGAAGCCTCCGCAAAC+TGG + Chr2:382114-382133 MsG0280006316.01.T01:intron 55.0%
! GTGATGGAGGAAGAGGAAGG+TGG - Chr2:377921-377940 None:intergenic 55.0%
!! AAAGAGGCGTTGGATGGGGA+TGG - Chr2:383279-383298 None:intergenic 55.0%
!! AGGTGGTGGAAGAAGTGAGG+AGG - Chr2:377904-377923 None:intergenic 55.0%
!! CTGGAAGCACTTTGTGAGCC+AGG - Chr2:382092-382111 None:intergenic 55.0%
!! GCCCAGGGCACCATTGTTTT+AGG - Chr2:380501-380520 None:intergenic 55.0%
!! GGAAGGTGGTGGAAGAAGTG+AGG - Chr2:377907-377926 None:intergenic 55.0%
ACAGGAGGTTTGGGAGGAGG+AGG - Chr2:377831-377850 None:intergenic 60.0%
CCCGTCCACCAGTTACATGG+AGG - Chr2:382927-382946 None:intergenic 60.0%
GACGGGGATGAGGAGGAAGA+AGG - Chr2:377857-377876 None:intergenic 60.0%
TAGCACGCTCTTGGTTGGCG+AGG - Chr2:383897-383916 None:intergenic 60.0%
TGACAGCATTTCCCTCCCGG+TGG - Chr2:382647-382666 None:intergenic 60.0%
TGCGGAGGCTTCAAACCGAC+TGG - Chr2:382111-382130 None:intergenic 60.0%
TGCGGTTACTGGCGGTAGCA+TGG + Chr2:378599-378618 MsG0280006316.01.T01:CDS 60.0%
TGGCCCCTGGTTCAGAACTC+TGG + Chr2:382532-382551 MsG0280006316.01.T01:CDS 60.0%
TGGCTTCTTGCTACCAGGGG+TGG - Chr2:380551-380570 None:intergenic 60.0%
TGTTGTAGTCGGAGCGGGGA+CGG - Chr2:377875-377894 None:intergenic 60.0%
!! TGGAGGTGCTGCCAATGCCA+AGG - Chr2:377788-377807 None:intergenic 60.0%
ATGACCTCTGGCAGTGGGCC+TGG - Chr2:380069-380088 None:intergenic 65.0%
GGAGGTTTGGGAGGAGGAGG+AGG - Chr2:377828-377847 None:intergenic 65.0%
GTTGTAGTCGGAGCGGGGAC+GGG - Chr2:377874-377893 None:intergenic 65.0%
TTGTAGTCGGAGCGGGGACG+GGG - Chr2:377873-377892 None:intergenic 65.0%
!! TCTGCAGCCTGGCCTTGCAC+AGG + Chr2:379649-379668 MsG0280006316.01.T01:CDS 65.0%
GCTACCAGGGGTGGCCCTGA+GGG - Chr2:380542-380561 None:intergenic 70.0%
TGCTACCAGGGGTGGCCCTG+AGG - Chr2:380543-380562 None:intergenic 70.0%
TGCTCCAGGCCCACTGCCAG+AGG + Chr2:380062-380081 MsG0280006316.01.T01:CDS 70.0%
ACCAGGGGTGGCCCTGAGGG+CGG - Chr2:380539-380558 None:intergenic 75.0%
GAGCGGGGACGGGGATGAGG+AGG - Chr2:377864-377883 None:intergenic 75.0%
GCCCCTCAAGCCCGCCCTCA+GGG + Chr2:380525-380544 MsG0280006316.01.T01:intron 75.0%
GCTTGAGGGGCGGCAGCCCA+GGG - Chr2:380516-380535 None:intergenic 75.0%
TCGGAGCGGGGACGGGGATG+AGG - Chr2:377867-377886 None:intergenic 75.0%
! CTGAGGGCGGGCTTGAGGGG+CGG - Chr2:380526-380545 None:intergenic 75.0%
! GCCCTGAGGGCGGGCTTGAG+GGG - Chr2:380529-380548 None:intergenic 75.0%
! GGCCCTGAGGGCGGGCTTGA+GGG - Chr2:380530-380549 None:intergenic 75.0%
! TGGCCCTGAGGGCGGGCTTG+AGG - Chr2:380531-380550 None:intergenic 75.0%
! CCAGGGGTGGCCCTGAGGGC+GGG - Chr2:380538-380557 None:intergenic 80.0%
! CGCCCCTCAAGCCCGCCCTC+AGG + Chr2:380524-380543 MsG0280006316.01.T01:intron 80.0%
! GGCTTGAGGGGCGGCAGCCC+AGG - Chr2:380517-380536 None:intergenic 80.0%
! CCCGCCCTCAGGGCCACCCC+TGG + Chr2:380535-380554 MsG0280006316.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr2 gene 377579 383996 377579 ID=MsG0280006316.01;Name=MsG0280006316.01
Chr2 mRNA 377579 383996 377579 ID=MsG0280006316.01.T01;Parent=MsG0280006316.01;Name=MsG0280006316.01.T01;_AED=0.31;_eAED=0.32;_QI=0|0|0|1|1|1|12|0|886
Chr2 exon 377579 377992 377579 ID=MsG0280006316.01.T01:exon:613;Parent=MsG0280006316.01.T01
Chr2 exon 378092 378160 378092 ID=MsG0280006316.01.T01:exon:614;Parent=MsG0280006316.01.T01
Chr2 exon 378252 378860 378252 ID=MsG0280006316.01.T01:exon:615;Parent=MsG0280006316.01.T01
Chr2 exon 379029 379211 379029 ID=MsG0280006316.01.T01:exon:616;Parent=MsG0280006316.01.T01
Chr2 exon 379306 379365 379306 ID=MsG0280006316.01.T01:exon:617;Parent=MsG0280006316.01.T01
Chr2 exon 379467 379670 379467 ID=MsG0280006316.01.T01:exon:618;Parent=MsG0280006316.01.T01
Chr2 exon 379835 380083 379835 ID=MsG0280006316.01.T01:exon:619;Parent=MsG0280006316.01.T01
Chr2 exon 380613 380711 380613 ID=MsG0280006316.01.T01:exon:620;Parent=MsG0280006316.01.T01
Chr2 exon 382516 382710 382516 ID=MsG0280006316.01.T01:exon:621;Parent=MsG0280006316.01.T01
Chr2 exon 383096 383188 383096 ID=MsG0280006316.01.T01:exon:622;Parent=MsG0280006316.01.T01
Chr2 exon 383321 383587 383321 ID=MsG0280006316.01.T01:exon:623;Parent=MsG0280006316.01.T01
Chr2 exon 383778 383996 383778 ID=MsG0280006316.01.T01:exon:624;Parent=MsG0280006316.01.T01
Chr2 CDS 377579 377992 377579 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 378092 378160 378092 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 378252 378860 378252 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 379029 379211 379029 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 379306 379365 379306 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 379467 379670 379467 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 379835 380083 379835 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 380613 380711 380613 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 382516 382710 382516 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 383096 383188 383096 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 383321 383587 383321 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Chr2 CDS 383778 383996 383778 ID=MsG0280006316.01.T01:cds;Parent=MsG0280006316.01.T01
Gene Sequence

>MsG0280006316.01.T01

ATGGCAAAGAGCAATGAAGAATCATCGAATCTGAATGTGATGAACAAACCACCTTTGAAGAAGACAAAGACACTTCCTTCTCTCAATCTCAGAGTTTCTGTTACTCCTCCCAATCCCAATGATAACAATGGAATTGGAGGAACTTCATCTTCATCTTCAACAACTAAGACTGATTTCTCACAACAACAATGGAACTACCCTTCTTTCCTTGGCATTGGCAGCACCTCCAGAAAAAGAAGACAAACACCTCCTCCTCCTCCCAAACCTCCTGTAAACCTTCTTCCTCCTCATCCCCGTCCCCGCTCCGACTACAACAAAACCACCTCCTCACTTCTTCCACCACCTTCCTCTTCCTCCATCACCAAACAACAACAACAACACACTCTATCTCCTCTCCCATCTTCTATCTTGTTATTAGTTATCAGTTTTATTATTCTTGTACCCTATTCAGCTTATTTACAATACAAACTTGCCAAACTCAAGGATATGAAACTTCAACTCTGTGGTCAAATTGATTTTTGTTCTGGGAATGGAAAAACATCGATACAAGAAGAGGTTGATGATGATGATAATGCAGATAGTAGAACAATTGCTTTGTATATTGTGCTTTTCACATTGATTTTGCCTTTTGTATTGTACAAATATCTTGATTATCTTCCTCAAATAATTAATTTCTTGAGGAGAACAGAAAGTAACAAGGAGGATGTACCATTAAAGAAGAGAGTTGCTTACATGGTAGATGTATTTTTCTCCATATATCCTTATGCAAAGCTACTTGCACTTCTTTGTGCAACTTTCTTTCTTATAGCATTTGGTGGTTTAGCATTGTATGCGGTTACTGGCGGTAGCATGGCTGAAGCACTTTGGCATTCTTGGACTTATGTAGCTGACGCAGGAAATCATGCTGAAACAGAAGGAACCGGCCAGAGAATCGTCTCTGTCTCAATTAGTGCGGGTGGCATGCTTATATTTGCCATGATGCTTGGGCTTGTTTCGGATGCTATATCGGAGAAGGTTGATTCACTTAGAAAAGGAAAGAGTGAAGTCATCGAAAGAAACCATGTACTCATCCTTGGCTGGAGTGACAAATTGGGCTCACTTTTGAAGCAGCTAGCAATAGCCAATAAGAGTGTTGGTGGTGGTGTTATTGTGGTGCTTGCAGAAAAGGAAAAGGAGGAAATGGAAATGGATATTGCAAAGCTCGAATTCGATTTCATGGGGACATCTGTAATATGTAGAAGTGGCAGTCCACTTATACTTGCTGACCTAAAGAAGGTTTCAGTTTCAAAGGCACGTGCAATCATTGTTTTAGCTGCGGACGAAAATGCAGATCAGAGTGATGCACGTGCTTTGAGAGTTGTTCTTAGCTTAGCTGGTGTAAAGGAGGGCTTAAGAGGGCATGTTGTTGTGGAGATGAGTGACCTTGATAATGAACCCTTAGTGAAACTTGTTGGTGGAGAACTCATTGAAACAGTTGTTGCACATGATGTAATTGGACGTTTGATGATTCAGTGTGCTCTGCAGCCTGGCCTTGCACAGATATGGGAGGACATTCTAGGATTTGAGAATGCCGAGTTTTACATAAAAAGATGGCCTGAACTGGATGATCTTCTTTTCAAAGACATATTAATTTCATTTCCTGATGCAATACCTTGTGGAGTTAAGGTTGCTGCAGATGGAGGGAAGATTGTCATAAATCCAGATGATAATTATGTTCTGAGAGATGGTGATGAAGTCCTTGTCATAGCCGAGGATGATGACACTTATGCTCCAGGCCCACTGCCAGAGGTACACAAGGGCTATTTCCCTAGGATACGTGATCCCCCTAAATATCCAGAGAAGATATTGTTTTGTGGCTGGCGCCGTGACATTGATGACATGATCATGGTTTTAGAAGCATTCTTGGCCCCTGGTTCAGAACTCTGGATGTTCAATGAAGTTCCTGAAAAGGAAAGAGAGAAGAAACTTGCTGCTGGTGAACTTGACGTATTTGGACTAGAGAACATAAAGCTTGTCCACCGGGAGGGAAATGCTGTCATTAGGCGGCACCTCGAGAGTCTTCCATTGGAGACCTTTGATTCTATCCTTATTCTTGCAGATGAGTCAGTGGAGGACTCTGTTGCTCATTCTGACTCAAGATCCCTTGCTACTCTTCTGCTCATTCGTGATATACAGTCGAGACGTCTACCATACCGAGATACAAAGTCAACTTCTTTAAGGTTATCTGGGTTCTCTCACAACTCATGGATCCGCGAAATGCAGCAAGCTTCAGATAAATCAATTATAATTAGTGAAATTTTGGATTCTAGGACTAGAAATCTAGTTTCCGTGTCCAGAATAAGTGATTATGTATTATCCAATGAGCTGGTTAGCATGGCACTAGCTATGGTAGCTGAAGACAAGCAAATCAACCGTGTTCTTGAGGAATTATTTGCGGAGGAGGGAAACGAGATGTGTATCAAGCCAGCAGAGTTCTATTTATTTGACCAGGAGGAGCTCTGTTTCTATGATATAATGATTAGGGGTCGTACAAGAAAGGAAATTGTTATAGGCTATCGCCTCGCCAACCAAGAGCGTGCTATTATCAACCCTTCAGAAAAATCTGTGCCAAGAAAATGGTCCCTTGACGATGTTTTTGTTGTTTTAGCCTCAGGCGAATGA

Protein sequence

>MsG0280006316.01.T01

MAKSNEESSNLNVMNKPPLKKTKTLPSLNLRVSVTPPNPNDNNGIGGTSSSSSTTKTDFSQQQWNYPSFLGIGSTSRKRRQTPPPPPKPPVNLLPPHPRPRSDYNKTTSSLLPPPSSSSITKQQQQHTLSPLPSSILLLVISFIILVPYSAYLQYKLAKLKDMKLQLCGQIDFCSGNGKTSIQEEVDDDDNADSRTIALYIVLFTLILPFVLYKYLDYLPQIINFLRRTESNKEDVPLKKRVAYMVDVFFSIYPYAKLLALLCATFFLIAFGGLALYAVTGGSMAEALWHSWTYVADAGNHAETEGTGQRIVSVSISAGGMLIFAMMLGLVSDAISEKVDSLRKGKSEVIERNHVLILGWSDKLGSLLKQLAIANKSVGGGVIVVLAEKEKEEMEMDIAKLEFDFMGTSVICRSGSPLILADLKKVSVSKARAIIVLAADENADQSDARALRVVLSLAGVKEGLRGHVVVEMSDLDNEPLVKLVGGELIETVVAHDVIGRLMIQCALQPGLAQIWEDILGFENAEFYIKRWPELDDLLFKDILISFPDAIPCGVKVAADGGKIVINPDDNYVLRDGDEVLVIAEDDDTYAPGPLPEVHKGYFPRIRDPPKYPEKILFCGWRRDIDDMIMVLEAFLAPGSELWMFNEVPEKEREKKLAAGELDVFGLENIKLVHREGNAVIRRHLESLPLETFDSILILADESVEDSVAHSDSRSLATLLLIRDIQSRRLPYRDTKSTSLRLSGFSHNSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYDIMIRGRTRKEIVIGYRLANQERAIINPSEKSVPRKWSLDDVFVVLASGE*