AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001515.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001515.01.T01 MTR_3g028040 67.429 743 153 5 2 678 533 1252 0.0 901
MsG0180001515.01.T01 MTR_3g034380 66.346 728 155 6 17 678 548 1251 0.0 877
MsG0180001515.01.T01 MTR_3g034430 68.188 745 168 5 2 678 533 1276 0.0 875
MsG0180001515.01.T01 MTR_3g033860 64.659 747 167 6 2 678 533 1252 0.0 871
MsG0180001515.01.T01 MTR_3g034460 64.651 744 154 6 2 678 517 1218 0.0 811
MsG0180001515.01.T01 MTR_4g050410 56.317 744 252 9 2 678 531 1268 0.0 736
MsG0180001515.01.T01 MTR_2g063777 55.376 744 257 9 2 678 531 1266 0.0 733
MsG0180001515.01.T01 MTR_3g032200 54.852 742 260 9 2 676 536 1269 0.0 723
MsG0180001515.01.T01 MTR_3g032760 55.570 745 255 11 2 678 532 1268 0.0 714
MsG0180001515.01.T01 MTR_3g031940 54.765 745 262 8 2 678 536 1273 0.0 711
MsG0180001515.01.T01 MTR_3g033380 55.481 748 255 8 2 678 536 1276 0.0 711
MsG0180001515.01.T01 MTR_3g032960 54.752 747 262 9 1 678 531 1270 0.0 709
MsG0180001515.01.T01 MTR_1g008240 52.625 762 266 8 2 678 518 1269 0.0 706
MsG0180001515.01.T01 MTR_3g435720 54.228 745 266 9 2 678 532 1269 0.0 698
MsG0180001515.01.T01 MTR_3g435740 53.826 745 269 9 2 678 576 1313 0.0 693
MsG0180001515.01.T01 MTR_3g030960 54.094 745 266 10 2 678 532 1268 0.0 690
MsG0180001515.01.T01 MTR_3g032150 57.269 681 249 9 1 655 529 1193 0.0 678
MsG0180001515.01.T01 MTR_3g032800 54.290 746 242 10 2 678 532 1247 0.0 677
MsG0180001515.01.T01 MTR_3g035940 53.091 744 252 10 2 678 532 1245 0.0 676
MsG0180001515.01.T01 MTR_0002s0110 52.823 744 254 10 2 678 532 1245 0.0 676
MsG0180001515.01.T01 MTR_3g030980 51.454 791 263 11 2 678 532 1315 0.0 676
MsG0180001515.01.T01 MTR_3g032370 54.270 726 252 10 1 655 529 1245 0.0 670
MsG0180001515.01.T01 MTR_3g033110 52.878 747 253 11 2 678 531 1248 0.0 669
MsG0180001515.01.T01 MTR_3g035480 52.103 737 260 9 2 671 532 1242 0.0 662
MsG0180001515.01.T01 MTR_3g032500 53.039 724 266 8 2 656 536 1254 0.0 652
MsG0180001515.01.T01 MTR_3g033240 51.402 749 241 12 2 678 535 1232 0.0 647
MsG0180001515.01.T01 MTR_0002s0090 52.554 744 255 9 2 678 532 1244 0.0 646
MsG0180001515.01.T01 MTR_3g035500 52.554 744 255 9 2 678 532 1244 0.0 646
MsG0180001515.01.T01 MTR_3g035960 52.064 751 255 11 2 678 532 1251 0.0 634
MsG0180001515.01.T01 MTR_8g030860 53.353 686 250 9 1 621 538 1218 0.0 608
MsG0180001515.01.T01 MTR_3g033130 48.724 784 226 15 1 675 516 1232 0.0 600
MsG0180001515.01.T01 MTR_0083s0120 50.557 718 235 9 2 652 81 745 0.0 586
MsG0180001515.01.T01 MTR_3g036050 48.448 741 285 11 2 655 145 875 0.0 584
MsG0180001515.01.T01 MTR_3g034650 48.889 720 181 13 46 674 124 747 0.0 561
MsG0180001515.01.T01 MTR_3g032340 42.930 785 308 11 2 676 537 1291 4.15e-179 545
MsG0180001515.01.T01 MTR_3g032110 42.621 786 308 12 2 676 533 1286 5.05e-176 536
MsG0180001515.01.T01 MTR_3g014080 42.013 745 335 11 2 678 532 1247 7.73e-168 514
MsG0180001515.01.T01 MTR_0137s0070 42.795 694 309 9 44 678 1 665 6.00e-165 489
MsG0180001515.01.T01 MTR_0002s0120 52.953 508 171 6 2 442 315 821 8.83e-156 471
MsG0180001515.01.T01 MTR_8g106550 47.794 680 258 20 2 638 464 1089 1.31e-155 479
MsG0180001515.01.T01 MTR_3g014080 41.331 721 339 12 2 678 532 1212 9.65e-155 479
MsG0180001515.01.T01 MTR_7g078790 62.304 382 140 1 2 379 520 901 1.38e-152 465
MsG0180001515.01.T01 MTR_0137s0070 42.090 670 313 10 44 678 1 630 1.23e-151 453
MsG0180001515.01.T01 MTR_3g033080 62.532 395 139 2 2 387 531 925 1.76e-151 463
MsG0180001515.01.T01 MTR_3g014040 42.445 728 339 12 2 678 518 1216 6.50e-149 463
MsG0180001515.01.T01 MTR_6g084550 65.634 355 121 1 2 356 518 871 2.46e-148 453
MsG0180001515.01.T01 MTR_4g019360 41.517 725 333 16 1 670 453 1141 2.03e-147 459
MsG0180001515.01.T01 MTR_0137s0010 42.061 718 324 13 2 678 72 738 2.70e-146 443
MsG0180001515.01.T01 MTR_8g446950 40.731 739 340 16 2 676 555 1259 1.13e-143 451
MsG0180001515.01.T01 MTR_5g037590 39.672 731 347 15 2 676 492 1184 1.29e-137 433
MsG0180001515.01.T01 MTR_0603s0010 39.916 714 342 13 1 661 591 1270 1.08e-135 430
MsG0180001515.01.T01 MTR_3g435220 40.325 739 345 14 1 676 489 1194 4.96e-135 426
MsG0180001515.01.T01 MTR_1g045960 39.160 738 347 14 2 676 502 1200 8.49e-134 423
MsG0180001515.01.T01 MTR_3g011620 39.560 728 354 12 2 676 536 1230 3.85e-133 422
MsG0180001515.01.T01 MTR_3g014360 35.280 805 359 16 2 676 517 1289 2.58e-118 384
MsG0180001515.01.T01 MTR_3g435210 39.342 699 289 17 1 669 336 929 4.83e-117 375
MsG0180001515.01.T01 MTR_3g020620 46.926 488 226 6 2 460 680 1163 7.24e-115 372
MsG0180001515.01.T01 MTR_3g020890 35.033 765 358 16 4 675 527 1245 1.32e-107 353
MsG0180001515.01.T01 MTR_3g024460 35.207 676 352 14 14 672 150 756 2.42e-105 337
MsG0180001515.01.T01 MTR_3g007190 33.243 740 307 14 2 676 450 1067 2.40e-99 328
MsG0180001515.01.T01 MTR_3g022400 34.934 687 362 16 6 673 519 1139 3.94e-98 326
MsG0180001515.01.T01 MTR_3g027420 36.484 677 344 14 13 673 533 1139 4.44e-98 326
MsG0180001515.01.T01 MTR_3g019040 35.641 679 343 17 13 672 546 1149 4.46e-97 323
MsG0180001515.01.T01 MTR_3g022940 36.575 689 348 19 6 673 522 1142 5.34e-97 323
MsG0180001515.01.T01 MTR_1g037610 37.296 673 352 18 2 650 532 1158 3.15e-96 325
MsG0180001515.01.T01 MTR_2g014840 33.025 757 382 15 4 675 532 1248 1.00e-95 321
MsG0180001515.01.T01 MTR_3g019000 35.269 689 353 14 5 672 534 1150 1.22e-95 320
MsG0180001515.01.T01 MTR_3g021380 35.827 695 345 18 6 673 512 1132 3.74e-95 318
MsG0180001515.01.T01 MTR_8g038590 35.070 710 365 17 29 678 571 1244 5.83e-95 319
MsG0180001515.01.T01 MTR_3g021100 35.662 687 357 15 6 673 530 1150 2.77e-94 316
MsG0180001515.01.T01 MTR_2g038930 33.743 732 381 20 10 674 380 1074 2.82e-94 315
MsG0180001515.01.T01 MTR_0005s0200 36.749 566 304 9 1 522 548 1103 1.35e-93 314
MsG0180001515.01.T01 MTR_2g038760 33.653 731 383 17 10 674 554 1248 1.59e-93 315
MsG0180001515.01.T01 MTR_3g018930 36.773 688 329 21 13 674 548 1155 2.28e-93 313
MsG0180001515.01.T01 MTR_3g018980 36.686 676 332 21 15 672 548 1145 1.17e-92 311
MsG0180001515.01.T01 MTR_3g022570 34.207 687 367 15 6 673 560 1180 2.06e-92 311
MsG0180001515.01.T01 MTR_3g027250 34.599 685 356 18 13 676 530 1143 3.15e-92 310
MsG0180001515.01.T01 MTR_3g021170 35.622 699 339 20 6 673 525 1143 2.43e-91 308
MsG0180001515.01.T01 MTR_2g039090 34.104 692 354 16 47 674 569 1222 6.82e-91 307
MsG0180001515.01.T01 MTR_3g023030 34.789 687 356 16 8 674 510 1124 7.74e-91 306
MsG0180001515.01.T01 MTR_3g023030 34.789 687 356 16 8 674 544 1158 1.06e-90 306
MsG0180001515.01.T01 MTR_3g022870 34.153 691 362 18 6 673 522 1142 1.33e-90 305
MsG0180001515.01.T01 MTR_3g014390 34.139 703 384 16 1 643 529 1212 5.28e-90 306
MsG0180001515.01.T01 MTR_3g022400 34.610 679 347 19 6 673 519 1111 8.54e-90 303
MsG0180001515.01.T01 MTR_3g022920 35.704 689 354 20 6 673 515 1135 9.60e-90 303
MsG0180001515.01.T01 MTR_3g071130 36.784 541 285 11 2 501 516 1040 1.35e-89 302
MsG0180001515.01.T01 MTR_2g038900 33.333 732 384 21 10 674 543 1237 6.54e-89 302
MsG0180001515.01.T01 MTR_3g071070 36.599 541 286 11 2 501 311 835 9.18e-89 296
MsG0180001515.01.T01 MTR_3g014320 33.286 700 392 17 2 645 532 1212 1.37e-88 302
MsG0180001515.01.T01 MTR_8g038570 34.324 740 381 19 2 676 544 1243 1.53e-88 301
MsG0180001515.01.T01 MTR_3g021400 34.366 710 336 18 6 673 514 1135 8.73e-88 298
MsG0180001515.01.T01 MTR_1g047800 39.286 504 282 10 5 501 529 1015 8.82e-88 297
MsG0180001515.01.T01 MTR_3g022060 35.758 660 313 21 35 672 471 1041 9.57e-88 296
MsG0180001515.01.T01 MTR_3g021340 35.123 689 350 19 6 673 524 1136 1.45e-87 297
MsG0180001515.01.T01 MTR_7g021000 35.177 651 327 16 32 672 561 1126 2.36e-86 294
MsG0180001515.01.T01 MTR_3g027200 35.863 672 318 20 31 670 564 1154 6.38e-86 293
MsG0180001515.01.T01 MTR_3g014510 29.847 851 356 20 2 676 532 1317 6.68e-85 291
MsG0180001515.01.T01 MTR_3g022790 35.650 662 337 25 13 641 539 1144 7.91e-83 286
MsG0180001515.01.T01 MTR_3g022790 29.146 398 205 15 268 624 982 1343 1.62e-22 103
MsG0180001515.01.T01 MTR_0425s0020 33.197 732 383 21 13 674 557 1252 1.91e-81 281
MsG0180001515.01.T01 MTR_5g095910 32.407 756 377 21 4 675 535 1240 4.12e-80 277
MsG0180001515.01.T01 MTR_3g022300 35.598 677 353 23 39 673 583 1218 1.58e-79 275
MsG0180001515.01.T01 MTR_0267s0070 47.493 379 184 6 2 371 538 910 2.58e-78 273
MsG0180001515.01.T01 MTR_3g027470 34.709 654 286 21 32 672 472 997 4.16e-76 263
MsG0180001515.01.T01 MTR_3g022600 33.378 740 379 24 13 673 557 1261 6.48e-76 265
MsG0180001515.01.T01 MTR_3g025360 35.390 616 304 18 6 586 551 1107 3.65e-75 262
MsG0180001515.01.T01 MTR_3g022870 31.404 691 345 19 6 673 522 1106 1.16e-73 258
MsG0180001515.01.T01 MTR_3g015260 32.496 677 329 17 13 672 547 1112 6.51e-72 253
MsG0180001515.01.T01 MTR_3g035810 42.857 371 195 8 6 370 506 865 5.55e-71 249
MsG0180001515.01.T01 MTR_3g022130 35.427 621 327 20 13 612 524 1091 6.46e-71 250
MsG0180001515.01.T01 MTR_3g070590 33.948 542 259 12 1 501 515 998 2.93e-70 248
MsG0180001515.01.T01 MTR_2g014720 32.772 534 277 10 6 520 441 911 1.61e-69 245
MsG0180001515.01.T01 MTR_3g018980 43.575 358 181 7 15 370 548 886 2.03e-69 244
MsG0180001515.01.T01 MTR_3g015260 37.325 501 258 13 13 502 547 1002 1.97e-68 242
MsG0180001515.01.T01 MTR_3g436130 61.932 176 65 1 121 296 18 191 4.62e-68 221
MsG0180001515.01.T01 MTR_2g014730 32.216 686 357 21 4 645 497 1118 1.77e-67 241
MsG0180001515.01.T01 MTR_3g022230 34.679 669 336 27 44 651 575 1203 1.20e-66 239
MsG0180001515.01.T01 MTR_3g022230 27.111 450 225 16 268 673 1207 1597 7.97e-25 111
MsG0180001515.01.T01 MTR_3g022230 29.825 399 220 16 268 649 1117 1472 2.53e-15 80.9
MsG0180001515.01.T01 MTR_6g084540 43.631 314 91 3 365 678 5 232 3.57e-66 218
MsG0180001515.01.T01 MTR_3g021330 37.111 450 221 12 44 457 156 579 1.65e-65 227
MsG0180001515.01.T01 MTR_3g021330 29.779 272 122 7 432 673 364 596 7.08e-19 91.3
MsG0180001515.01.T01 MTR_3g014470 43.260 319 156 5 2 315 497 795 8.51e-65 229
MsG0180001515.01.T01 MTR_7g021000 44.932 296 154 4 32 325 561 849 9.52e-65 229
MsG0180001515.01.T01 MTR_3g018970 36.531 490 237 14 65 527 51 493 2.78e-60 211
MsG0180001515.01.T01 MTR_3g018970 29.052 327 154 15 356 672 257 515 1.82e-13 73.9
MsG0180001515.01.T01 MTR_3g022740 35.797 433 219 12 15 428 265 657 1.53e-59 213
MsG0180001515.01.T01 MTR_3g031860 59.375 192 71 4 484 675 1 185 5.90e-58 198
MsG0180001515.01.T01 MTR_8g036195 31.259 675 351 23 11 675 511 1082 7.36e-56 206
MsG0180001515.01.T01 MTR_6g047450 29.412 697 368 25 2 678 514 1106 2.66e-55 204
MsG0180001515.01.T01 MTR_6g046480 29.508 671 353 20 11 676 527 1082 1.59e-54 202
MsG0180001515.01.T01 MTR_6g046620 29.635 685 332 24 2 668 470 1022 4.69e-54 201
MsG0180001515.01.T01 MTR_3g086070 29.718 673 354 21 13 673 526 1091 7.84e-53 197
MsG0180001515.01.T01 MTR_0133s0020 30.585 667 345 22 11 669 534 1090 5.99e-52 194
MsG0180001515.01.T01 MTR_2g060700 31.733 479 232 10 8 483 317 703 3.34e-51 189
MsG0180001515.01.T01 MTR_5g071310 34.400 500 267 15 11 509 500 939 4.47e-51 192
MsG0180001515.01.T01 MTR_8g039260 34.243 403 202 9 5 402 76 420 8.82e-51 186
MsG0180001515.01.T01 MTR_5g072340 35.099 453 235 13 64 510 576 975 9.60e-51 191
MsG0180001515.01.T01 MTR_4g055630 34.411 526 287 21 11 509 533 1027 1.09e-50 191
MsG0180001515.01.T01 MTR_5g072140 34.227 485 280 15 11 493 493 940 2.25e-50 189
MsG0180001515.01.T01 MTR_1643s0010 42.917 240 120 6 131 367 1 226 3.34e-50 178
MsG0180001515.01.T01 MTR_3g014460 33.402 482 197 14 282 676 1 445 4.64e-49 178
MsG0180001515.01.T01 MTR_6g052455 29.552 670 353 25 11 672 422 980 5.27e-49 186
MsG0180001515.01.T01 MTR_0256s0050 28.571 679 360 20 10 673 494 1062 3.28e-47 180
MsG0180001515.01.T01 MTR_1g022380 34.868 456 254 16 65 509 570 993 4.01e-47 180
MsG0180001515.01.T01 MTR_5g071780 32.371 485 265 16 3 447 524 985 5.77e-47 179
MsG0180001515.01.T01 MTR_7g071940 33.075 517 294 18 3 509 517 991 1.07e-46 178
MsG0180001515.01.T01 MTR_0144s0060 32.582 488 298 16 64 549 565 1023 6.72e-46 176
MsG0180001515.01.T01 MTR_0144s0060 34.951 206 114 4 14 201 940 1143 7.11e-18 89.0
MsG0180001515.01.T01 MTR_5g035480 33.691 466 260 17 51 500 547 979 8.13e-46 176
MsG0180001515.01.T01 MTR_5g070490 34.354 457 258 13 11 451 532 962 1.02e-45 176
MsG0180001515.01.T01 MTR_5g070490 32.642 193 113 6 489 676 808 988 4.81e-11 66.6
MsG0180001515.01.T01 MTR_1g023600 33.598 503 277 17 11 501 530 987 1.11e-45 175
MsG0180001515.01.T01 MTR_3g023320 29.701 670 359 27 11 670 529 1096 1.86e-45 175
MsG0180001515.01.T01 MTR_5g071670 32.207 503 273 14 11 509 527 965 2.54e-45 175
MsG0180001515.01.T01 MTR_5g071670 32.335 167 102 4 154 317 1131 1289 2.09e-12 71.2
MsG0180001515.01.T01 MTR_5g071670 29.963 267 148 9 414 674 749 982 3.16e-11 67.4
MsG0180001515.01.T01 MTR_6g046930 33.598 503 293 21 64 549 564 1042 4.76e-45 174
MsG0180001515.01.T01 MTR_6g046130 30.376 665 337 23 11 668 525 1070 4.86e-45 174
MsG0180001515.01.T01 MTR_3g026660 31.239 557 331 19 13 535 571 1109 1.70e-44 172
MsG0180001515.01.T01 MTR_3g026660 31.239 557 331 19 13 535 514 1052 1.79e-44 172
MsG0180001515.01.T01 MTR_6g046570 28.838 697 333 27 1 672 519 1077 2.03e-44 172
MsG0180001515.01.T01 MTR_5g028610 32.573 482 275 17 58 501 559 1028 9.01e-44 170
MsG0180001515.01.T01 MTR_0133s0030 32.359 513 285 19 6 495 517 990 1.28e-43 169
MsG0180001515.01.T01 MTR_5g071220 33.399 509 288 18 11 509 533 1000 3.48e-43 168
MsG0180001515.01.T01 MTR_5g071220 33.399 509 288 18 11 509 533 1000 3.95e-43 168
MsG0180001515.01.T01 MTR_5g071800 32.625 518 294 16 6 510 522 997 4.41e-43 167
MsG0180001515.01.T01 MTR_5g035280 30.515 544 319 19 34 547 549 1063 5.89e-43 167
MsG0180001515.01.T01 MTR_3g436140 55.495 182 72 3 365 545 5 178 7.09e-43 153
MsG0180001515.01.T01 MTR_6g016430 33.958 480 275 19 40 499 562 1019 1.25e-42 166
MsG0180001515.01.T01 MTR_5g071470 31.600 500 282 15 11 509 532 972 1.26e-42 166
MsG0180001515.01.T01 MTR_5g071470 32.653 196 99 8 489 671 811 986 1.48e-12 71.6
MsG0180001515.01.T01 MTR_0230s0010 32.122 523 308 21 11 521 472 959 1.46e-42 166
MsG0180001515.01.T01 MTR_5g040770 29.211 558 324 16 1 545 281 780 2.74e-42 164
MsG0180001515.01.T01 MTR_5g028340 28.924 688 337 30 10 667 509 1074 3.09e-42 165
MsG0180001515.01.T01 MTR_5g070960 33.261 463 262 17 65 503 577 1016 8.27e-42 164
MsG0180001515.01.T01 MTR_3g018930 45.276 254 119 8 13 254 548 793 1.02e-41 162
MsG0180001515.01.T01 MTR_5g037450 28.594 633 316 23 61 674 586 1101 1.04e-41 163
MsG0180001515.01.T01 MTR_7g089080 30.392 510 253 18 4 492 859 1287 3.47e-41 162
MsG0180001515.01.T01 MTR_6g052760 29.167 672 355 28 11 672 531 1091 5.37e-41 161
MsG0180001515.01.T01 MTR_3g022240 36.364 286 154 7 137 408 3 274 2.85e-40 152
MsG0180001515.01.T01 MTR_5g035240 32.791 430 245 15 38 453 551 950 2.88e-40 159
MsG0180001515.01.T01 MTR_6g046440 28.836 593 319 22 94 676 540 1039 3.04e-40 159
MsG0180001515.01.T01 MTR_5g035530 30.917 469 273 14 61 502 461 905 8.22e-40 157
MsG0180001515.01.T01 MTR_5g028070 29.688 512 305 17 32 495 678 1182 3.55e-38 152
MsG0180001515.01.T01 MTR_5g028420 29.597 571 308 20 10 499 504 1061 4.78e-38 152
MsG0180001515.01.T01 MTR_4g126000 31.115 511 290 21 15 501 401 873 5.53e-38 152
MsG0180001515.01.T01 MTR_5g071823 30.986 497 297 17 11 501 533 989 1.15e-37 151
MsG0180001515.01.T01 MTR_5g071823 26.039 457 234 20 251 673 627 1013 2.04e-12 71.2
MsG0180001515.01.T01 MTR_5g071850 30.986 497 297 17 11 501 533 989 1.15e-37 151
MsG0180001515.01.T01 MTR_5g071850 26.039 457 234 20 251 673 627 1013 2.04e-12 71.2
MsG0180001515.01.T01 MTR_5g028290 29.679 529 299 18 47 520 579 1089 1.62e-37 150
MsG0180001515.01.T01 MTR_5g028750 28.697 568 314 19 10 499 494 1048 1.77e-37 150
MsG0180001515.01.T01 MTR_2g078070 32.000 500 269 19 54 499 580 1062 3.30e-37 149
MsG0180001515.01.T01 MTR_5g070470 34.228 447 235 15 64 502 575 970 6.26e-37 149
MsG0180001515.01.T01 MTR_0511s0020 28.736 609 331 23 71 672 559 1071 6.40e-37 149
MsG0180001515.01.T01 MTR_6g016420 31.493 489 274 18 53 499 526 995 4.15e-36 146
MsG0180001515.01.T01 MTR_5g037500 30.189 477 254 17 61 495 514 953 1.40e-34 141
MsG0180001515.01.T01 MTR_5g071570 31.603 443 234 14 11 445 534 915 1.60e-34 141
MsG0180001515.01.T01 MTR_6g046450 29.390 541 301 18 11 509 576 1077 1.98e-34 141
MsG0180001515.01.T01 MTR_5g072250 35.860 343 192 9 11 348 532 851 9.03e-34 139
MsG0180001515.01.T01 MTR_5g037460 30.576 399 241 12 15 402 404 777 4.35e-33 136
MsG0180001515.01.T01 MTR_6g016420 30.498 482 250 18 53 499 526 957 1.93e-32 134
MsG0180001515.01.T01 MTR_3g022590 30.075 399 184 13 280 661 120 440 7.96e-32 129
MsG0180001515.01.T01 MTR_3g022590 31.973 441 253 19 103 508 9 437 3.90e-27 115
MsG0180001515.01.T01 MTR_5g034770 35.270 241 150 4 58 296 557 793 1.28e-31 132
MsG0180001515.01.T01 MTR_3g033980 46.939 196 74 6 482 669 25 198 1.30e-30 119
MsG0180001515.01.T01 MTR_3g071080 30.685 365 193 8 335 675 87 415 2.01e-29 122
MsG0180001515.01.T01 MTR_3g071040 30.685 365 193 8 335 675 87 415 2.01e-29 122
MsG0180001515.01.T01 MTR_3g071010 30.361 415 216 11 286 675 58 424 2.54e-29 121
MsG0180001515.01.T01 MTR_3g022730 33.048 351 166 10 322 649 3 307 3.18e-28 118
MsG0180001515.01.T01 MTR_3g022730 31.003 329 185 11 355 673 135 431 8.92e-27 114
MsG0180001515.01.T01 MTR_5g035200 30.612 392 235 18 146 528 1 364 8.37e-28 115
MsG0180001515.01.T01 MTR_3g070650 30.746 335 178 7 365 675 192 496 2.94e-27 116
MsG0180001515.01.T01 MTR_6g046750 26.742 531 290 19 145 672 4 438 4.51e-26 112
MsG0180001515.01.T01 MTR_5g040900 28.508 449 233 15 11 451 492 860 7.97e-26 114
MsG0180001515.01.T01 MTR_2g039040 46.000 150 74 3 10 153 415 563 1.35e-25 112
MsG0180001515.01.T01 MTR_4g021690 27.165 508 300 18 17 491 540 1010 2.74e-25 112
MsG0180001515.01.T01 MTR_3g034010 61.728 81 31 0 367 447 12 92 2.18e-24 98.2
MsG0180001515.01.T01 MTR_3g015280 35.088 228 131 9 57 275 571 790 2.31e-23 105
MsG0180001515.01.T01 MTR_6g046760 28.518 533 270 20 145 671 4 431 6.97e-23 102
MsG0180001515.01.T01 MTR_3g015560 31.835 267 143 9 57 294 570 826 2.06e-22 103
MsG0180001515.01.T01 MTR_4g022480 26.205 477 282 18 32 452 557 1019 4.14e-22 102
MsG0180001515.01.T01 MTR_3g015550 31.923 260 139 10 57 286 571 822 4.46e-22 102
MsG0180001515.01.T01 MTR_3g015550 31.923 260 139 10 57 286 608 859 5.09e-22 102
MsG0180001515.01.T01 MTR_3g024280 41.379 145 65 2 1 143 137 263 1.34e-21 95.5
MsG0180001515.01.T01 MTR_4g022540 27.308 509 315 25 17 502 539 1015 3.34e-21 99.4
MsG0180001515.01.T01 MTR_4g022560 26.186 485 295 17 32 487 559 1009 7.28e-21 98.2
MsG0180001515.01.T01 MTR_4g050790 33.921 227 127 9 57 266 571 791 8.96e-21 97.8
MsG0180001515.01.T01 MTR_1g078450 40.876 137 76 3 131 263 1 136 5.58e-20 90.9
MsG0180001515.01.T01 MTR_5g039570 33.184 223 119 7 109 307 388 604 4.00e-19 92.0
MsG0180001515.01.T01 MTR_0144s0010 29.648 398 215 18 154 502 1 382 2.12e-18 89.0
MsG0180001515.01.T01 MTR_3g022810 35.238 210 103 8 261 454 94 286 3.08e-18 87.0
MsG0180001515.01.T01 MTR_3g023020 32.704 159 81 2 519 673 7 143 1.05e-17 80.9
MsG0180001515.01.T01 MTR_4g022460 26.465 495 299 20 26 491 553 1011 1.71e-17 87.4
MsG0180001515.01.T01 MTR_3g035815 32.192 146 76 1 528 673 1 123 3.66e-17 78.6
MsG0180001515.01.T01 MTR_1g019550 28.139 462 254 22 234 650 421 849 7.96e-17 85.5
MsG0180001515.01.T01 MTR_2053s0010 30.818 159 83 2 519 673 7 142 8.68e-17 78.2
MsG0180001515.01.T01 MTR_1g019550 27.865 445 248 19 248 650 580 993 9.24e-17 85.5
MsG0180001515.01.T01 MTR_1g019550 27.865 445 248 19 248 650 613 1026 1.20e-16 85.1
MsG0180001515.01.T01 MTR_0005s0230 48.958 96 48 1 49 144 382 476 1.23e-16 83.6
MsG0180001515.01.T01 MTR_3g015500 32.864 213 128 8 57 266 609 809 1.50e-16 84.3
MsG0180001515.01.T01 MTR_6g078930 29.474 475 239 21 249 650 664 1115 3.72e-16 83.6
MsG0180001515.01.T01 MTR_6g078930 27.865 445 236 20 231 631 738 1141 3.81e-12 70.5
MsG0180001515.01.T01 MTR_3g032360 39.375 160 51 2 439 597 39 153 4.08e-16 77.0
MsG0180001515.01.T01 MTR_0005s0210 30.043 233 131 5 378 585 202 427 5.11e-16 81.3
MsG0180001515.01.T01 MTR_6g452490 29.934 304 170 12 221 499 651 936 5.65e-16 82.8
MsG0180001515.01.T01 MTR_6g046750 26.396 394 224 15 145 501 4 368 2.57e-15 79.0
MsG0180001515.01.T01 MTR_4g022950 33.508 191 99 7 59 241 9 179 3.16e-15 79.0
MsG0180001515.01.T01 MTR_6g046550 25.566 442 199 14 250 672 325 655 4.77e-15 79.3
MsG0180001515.01.T01 MTR_3g032140 38.750 160 52 2 439 597 39 153 7.59e-15 73.2
MsG0180001515.01.T01 MTR_7g091140 41.739 115 63 4 33 145 1139 1251 8.99e-14 75.9
MsG0180001515.01.T01 MTR_8g037220 28.507 442 219 19 90 501 1343 1717 1.14e-13 75.5
MsG0180001515.01.T01 MTR_8g037220 29.316 307 154 13 383 670 1476 1738 2.01e-13 74.7
MsG0180001515.01.T01 MTR_8g037220 28.507 442 219 19 90 501 1564 1938 1.24e-13 75.5
MsG0180001515.01.T01 MTR_8g037220 29.316 307 154 13 383 670 1697 1959 2.01e-13 74.7
MsG0180001515.01.T01 MTR_8g445980 42.574 101 54 3 47 146 570 667 2.43e-13 73.9
MsG0180001515.01.T01 MTR_8g062130 27.789 493 264 23 30 481 656 1097 3.39e-13 73.9
MsG0180001515.01.T01 MTR_3g006280 32.164 342 179 15 337 650 853 1169 4.36e-13 73.6
MsG0180001515.01.T01 MTR_6g079000 26.957 460 252 22 238 650 782 1204 5.26e-13 73.2
MsG0180001515.01.T01 MTR_6g079000 24.926 674 404 28 17 630 623 1254 8.02e-12 69.3
MsG0180001515.01.T01 MTR_6g079000 25.037 671 400 30 40 650 671 1298 1.05e-11 68.9
MsG0180001515.01.T01 MTR_0007s0070 27.876 452 256 16 224 660 98 494 2.76e-12 70.1
MsG0180001515.01.T01 MTR_8g011850 26.879 439 223 15 94 501 1621 1992 4.25e-12 70.5
MsG0180001515.01.T01 MTR_3g022260 32.143 196 81 8 484 672 1 151 4.80e-12 64.7
MsG0180001515.01.T01 MTR_7g078300 40.000 115 67 2 33 146 560 673 7.41e-12 69.3
MsG0180001515.01.T01 MTR_4g022960 28.016 257 140 10 16 260 512 735 1.12e-11 68.9
MsG0180001515.01.T01 MTR_0007s0090 26.017 688 393 26 38 646 22 672 1.79e-11 68.2
MsG0180001515.01.T01 MTR_7g491190 42.982 114 61 4 33 144 527 638 2.54e-11 67.4
MsG0180001515.01.T01 MTR_7g091200 42.982 114 61 4 33 144 546 657 2.81e-11 67.4
MsG0180001515.01.T01 MTR_6g079090 28.000 450 243 23 216 639 592 986 5.30e-11 66.6
MsG0180001515.01.T01 MTR_6g079090 31.889 323 158 17 337 650 653 922 9.38e-11 65.9
MsG0180001515.01.T01 MTR_7g078630 35.714 140 86 3 8 146 399 535 5.89e-11 66.2
MsG0180001515.01.T01 MTR_4g119195 45.977 87 46 1 61 146 591 677 6.52e-11 66.2
MsG0180001515.01.T01 MTR_4g119195 45.977 87 46 1 61 146 591 677 6.99e-11 66.2
MsG0180001515.01.T01 MTR_8g062140 41.237 97 57 0 50 146 776 872 7.58e-11 66.2
MsG0180001515.01.T01 MTR_6g078480 34.673 199 103 9 309 501 684 861 8.46e-11 65.9
MsG0180001515.01.T01 MTR_5g035450 43.182 88 49 1 61 147 87 174 8.51e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001515.01.T01 AT3G14470 36.885 488 263 6 7 482 538 992 2.49e-85 290
MsG0180001515.01.T01 AT3G14470 36.885 488 263 6 7 482 538 992 2.49e-85 290
MsG0180001515.01.T01 AT3G14460 42.651 347 181 6 32 367 560 899 4.22e-68 243
MsG0180001515.01.T01 AT3G14460 29.231 325 174 8 378 676 1128 1422 7.75e-25 111
MsG0180001515.01.T01 AT1G69550 27.197 603 331 27 50 630 721 1237 1.48e-14 78.2
MsG0180001515.01.T01 AT1G69550 28.894 398 222 16 41 423 904 1255 3.80e-13 73.6
MsG0180001515.01.T01 AT1G27180 28.312 385 204 17 28 399 697 1022 2.11e-11 68.2
MsG0180001515.01.T01 AT1G27180 28.312 385 204 17 28 399 697 1022 2.11e-11 68.2
MsG0180001515.01.T01 AT1G27180 28.312 385 204 17 28 399 697 1022 2.11e-11 68.2
MsG0180001515.01.T01 AT1G27180 28.312 385 204 17 28 399 871 1196 2.65e-11 67.8
MsG0180001515.01.T01 AT1G27180 28.312 385 204 17 28 399 871 1196 2.65e-11 67.8
MsG0180001515.01.T01 AT1G27180 28.312 385 204 17 28 399 1035 1360 2.70e-11 67.8
MsG0180001515.01.T01 AT1G27180 28.312 385 204 17 28 399 873 1198 2.87e-11 67.8
MsG0180001515.01.T01 AT3G25510 27.198 489 258 22 61 506 499 932 7.58e-11 66.2
MsG0180001515.01.T01 AT3G25510 27.198 489 258 22 61 506 499 932 7.58e-11 66.2

Find 162 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAGGAATGTGAGCAATTT+TGG 0.099146 1:+22440574 None:intergenic
TGTATAACTTCAGAGCTTTA+AGG 0.141052 1:+22441750 None:intergenic
CTCCAAGATCTTGTCATTAA+TGG 0.162653 1:-22441244 MsG0180001515.01.T01:CDS
AATAGAAATTGTTTGTAATT+TGG 0.164620 1:+22441021 None:intergenic
GTGTAATTGCTCCACGTTTC+AGG 0.168449 1:+22441340 None:intergenic
TGGAAACCCCATTCAATTAA+TGG 0.204315 1:+22440971 None:intergenic
ATAGAAATTGTTTGTAATTT+GGG 0.219954 1:+22441022 None:intergenic
GAGCAATTACACGTCGCTTT+TGG 0.241170 1:-22441329 MsG0180001515.01.T01:CDS
GAAAGTGATGACTCGCTTAA+AGG 0.246242 1:-22442142 MsG0180001515.01.T01:CDS
TTGGAGGGTTGAGGGGTTAT+AGG 0.248553 1:+22441180 None:intergenic
CCCTTCCTCTCTAAAGTTAC+TGG 0.264053 1:-22440657 MsG0180001515.01.T01:CDS
ACCGGATTCAGTTGGCAATT+TGG 0.265629 1:-22442575 MsG0180001515.01.T01:CDS
AGTCAATGTTCAATCTCTTT+AGG 0.277338 1:+22442083 None:intergenic
TCCTACACATTGAATACTAT+TGG 0.279314 1:-22442699 MsG0180001515.01.T01:CDS
ACTTAAGTCAATTTCTTCTA+TGG 0.280439 1:+22441685 None:intergenic
GACAGAAACACCAAGGAAAT+TGG 0.299750 1:+22440869 None:intergenic
TCATACCTTTCTTCTAAAAC+AGG 0.326748 1:+22440620 None:intergenic
CTTGTCATTAATGGTTGTAT+TGG 0.330553 1:-22441235 MsG0180001515.01.T01:CDS
TCCAATATGTTCTGGCAATT+CGG 0.339140 1:+22442441 None:intergenic
TTGAAAGATAAGTAAGGCTT+TGG 0.343794 1:+22440951 None:intergenic
CATAGTGCAAACTCTAGTTT+TGG 0.344822 1:+22441064 None:intergenic
TTCAATCTCTTTAGGTCTGT+TGG 0.345091 1:+22442091 None:intergenic
TCAATCTCTTTAGGTCTGTT+GGG 0.349437 1:+22442092 None:intergenic
TCTGAAATGAAATGCTTAGA+TGG 0.354345 1:-22440833 MsG0180001515.01.T01:CDS
TCCGTTGAGGTAGTGATATA+AGG 0.355438 1:+22441131 None:intergenic
AAAAGGTTGAAAGGAAGAAT+TGG 0.371394 1:+22441859 None:intergenic
GAGGAAGGGAGATTGTGTTC+TGG 0.376095 1:+22440671 None:intergenic
TATAACAGGTATGTCGATAT+TGG 0.376838 1:-22441924 MsG0180001515.01.T01:CDS
GGCAAATGTCCCCTCAGTTC+AGG 0.377413 1:+22441722 None:intergenic
TGAAGAATCTCCCAACCAAC+TGG 0.378514 1:+22442039 None:intergenic
ATTAACTTTCCAATATGTTC+TGG 0.378806 1:+22442433 None:intergenic
CATTAATGGTTGTATTGGTC+TGG 0.378913 1:-22441230 MsG0180001515.01.T01:CDS
ATGAAATGCTTAGATGGAAA+TGG 0.379062 1:-22440827 MsG0180001515.01.T01:CDS
TCAAGTTCAACAATTTGCTT+TGG 0.382433 1:+22442364 None:intergenic
CTCAAGGACCTACGTATAAC+AGG 0.389558 1:-22441938 MsG0180001515.01.T01:CDS
TTCACTTTCCTCCTTCCCAC+TGG 0.392569 1:-22441281 MsG0180001515.01.T01:CDS
ACCGAATTGCCAGAACATAT+TGG 0.399536 1:-22442442 MsG0180001515.01.T01:CDS
ATGACAAGATCTTGGAGCTT+AGG 0.404049 1:+22441250 None:intergenic
ACAAGCTTTCCCAGTTGGTT+GGG 0.405531 1:-22442049 MsG0180001515.01.T01:CDS
TGCAAGGTTTCCTAAGCTAC+AGG 0.406613 1:-22442275 MsG0180001515.01.T01:CDS
CTTTCCTCCTTCCCACTGGA+TGG 0.410129 1:-22441277 MsG0180001515.01.T01:CDS
AAAATGAGAGAGGGGAGAAT+TGG 0.412263 1:-22440598 MsG0180001515.01.T01:CDS
AGGAAACAAGCCATCTTGTA+AGG 0.413358 1:+22441781 None:intergenic
ACCAAATTGCCAACTGAATC+CGG 0.415683 1:+22442574 None:intergenic
GAGATACAAACTTTCAAGAT+TGG 0.418028 1:+22441096 None:intergenic
AATTTGAGAACATGTCAAAT+TGG 0.419006 1:-22441817 MsG0180001515.01.T01:CDS
ACAAAATTTCTTATCTATAA+CGG 0.426122 1:-22442674 MsG0180001515.01.T01:CDS
AAAGTGATGACTCGCTTAAA+GGG 0.432255 1:-22442141 MsG0180001515.01.T01:CDS
GATGCCGCCATTAATTGAAT+GGG 0.433794 1:-22440978 MsG0180001515.01.T01:CDS
TAGAAGAAATTGACTTAAGT+TGG 0.433951 1:-22441682 MsG0180001515.01.T01:intron
AACCATTAATGACAAGATCT+TGG 0.435188 1:+22441242 None:intergenic
AATAACTTCCCCTGTAGCTT+AGG 0.437753 1:+22442265 None:intergenic
AATGGTGATATTGCTATAGT+TGG 0.440521 1:+22442600 None:intergenic
GCAATTGCTGCCAATTTCCT+TGG 0.442679 1:-22440879 MsG0180001515.01.T01:CDS
CAATCTCTTTAGGTCTGTTG+GGG 0.446723 1:+22442093 None:intergenic
CCCAGTAACTTTAGAGAGGA+AGG 0.447588 1:+22440656 None:intergenic
ACAATTGGTCCAGAGTTCTA+TGG 0.453741 1:-22441899 MsG0180001515.01.T01:CDS
TGAGGAATTAACGCTACAAT+GGG 0.456913 1:-22442170 MsG0180001515.01.T01:CDS
GACAAGCTTTCCCAGTTGGT+TGG 0.458199 1:-22442050 MsG0180001515.01.T01:CDS
CCAGAGTTCTATGGCATAGT+TGG 0.458294 1:-22441890 MsG0180001515.01.T01:CDS
AGATGCCGCCATTAATTGAA+TGG 0.458622 1:-22440979 MsG0180001515.01.T01:CDS
ATGAAGTGACTTCAAAGAAG+TGG 0.459592 1:+22441396 None:intergenic
TTGTCATTTATTTCTATCAC+AGG 0.460393 1:+22440557 None:intergenic
TGAAATGCTTAGATGGAAAT+GGG 0.463571 1:-22440826 MsG0180001515.01.T01:CDS
TAGAGGTTGCATGTTGTGTC+AGG 0.464749 1:+22442505 None:intergenic
TATTGTTAACACCTTGTTGA+AGG 0.464828 1:-22440903 MsG0180001515.01.T01:CDS
CCGTTGAGGTAGTGATATAA+GGG 0.480768 1:+22441132 None:intergenic
TTTCTTCTATGGAAGAAAGA+TGG 0.482775 1:+22441696 None:intergenic
TAAAGTGTTTCGAGAGAGGA+AGG 0.484947 1:+22440725 None:intergenic
ATAGTAGGCAAGCAAAATGT+TGG 0.486424 1:-22442316 MsG0180001515.01.T01:CDS
CCTTCCTCTCTAAAGTTACT+GGG 0.489199 1:-22440656 MsG0180001515.01.T01:CDS
AAAATAAAGTGTTTCGAGAG+AGG 0.489760 1:+22440721 None:intergenic
TGAGCACCACGCTAAAATCA+AGG 0.491150 1:+22442471 None:intergenic
AGAGCTTTAAGGCAAGGAAA+AGG 0.496021 1:+22441761 None:intergenic
ACATGTCAAATTGGAAGGAA+TGG 0.500946 1:-22441808 MsG0180001515.01.T01:CDS
GCCAACTGAATCCGGTAGAA+TGG 0.507479 1:+22442582 None:intergenic
TACTTGTCTGATCGATATCA+AGG 0.509037 1:+22442398 None:intergenic
TCTCAAATTGCAACATCTCA+AGG 0.513928 1:+22441831 None:intergenic
ATGTCGATATTGGAGACAAT+TGG 0.514773 1:-22441914 MsG0180001515.01.T01:CDS
TGAGAACATGTCAAATTGGA+AGG 0.518575 1:-22441813 MsG0180001515.01.T01:CDS
GAAAGGTATGAAAATGAGAG+AGG 0.520241 1:-22440608 MsG0180001515.01.T01:CDS
GAAGACCGTGGAGTCTCAAA+AGG 0.531256 1:+22441452 None:intergenic
AACTTCAGAGCTTTAAGGCA+AGG 0.533046 1:+22441755 None:intergenic
ACTTCATATTTATGATTGCA+AGG 0.543630 1:-22441380 MsG0180001515.01.T01:CDS
ATCTCTCACTGCATTTCCAG+TGG 0.545047 1:-22441428 MsG0180001515.01.T01:CDS
ATTTAATACCCACACTTGGA+AGG 0.545246 1:-22442642 MsG0180001515.01.T01:CDS
TTCTATGGCATAGTTGGAGG+AGG 0.546256 1:-22441884 MsG0180001515.01.T01:CDS
AAAGGTATGAAAATGAGAGA+GGG 0.546762 1:-22440607 MsG0180001515.01.T01:CDS
ACTGGAAATGCAGTGAGAGA+TGG 0.546982 1:+22441430 None:intergenic
TTGAGGAATTAACGCTACAA+TGG 0.550702 1:-22442171 MsG0180001515.01.T01:CDS
AAGGTATGAAAATGAGAGAG+GGG 0.552434 1:-22440606 MsG0180001515.01.T01:CDS
TAGCAATATCACCATTCTAC+CGG 0.552625 1:-22442593 MsG0180001515.01.T01:CDS
TCAAGGTTTGCAAGTAGTAG+AGG 0.552715 1:+22442488 None:intergenic
TAAGTGTGAAGGAGCTTGCA+AGG 0.552751 1:-22442291 MsG0180001515.01.T01:CDS
AATTGCAACATCTCAAGGGA+TGG 0.554396 1:+22441836 None:intergenic
AAAATCAAGTGTTTCAAGAG+AGG 0.554968 1:+22440790 None:intergenic
CTCACTGCATTTCCAGTGGA+AGG 0.555451 1:-22441424 MsG0180001515.01.T01:CDS
CAACGTCAATGACGTTCTGC+AGG 0.555488 1:+22442233 None:intergenic
CCAACTATGCCATAGAACTC+TGG 0.556261 1:+22441890 None:intergenic
GAGTTCTATGGCATAGTTGG+AGG 0.556676 1:-22441887 MsG0180001515.01.T01:CDS
AAATTTCTTATCTATAACGG+TGG 0.559658 1:-22442671 MsG0180001515.01.T01:CDS
GAAATTGTTTGTAATTTGGG+AGG 0.560791 1:+22441025 None:intergenic
GAATGGCTTCCCTTACAAGA+TGG 0.561165 1:-22441791 MsG0180001515.01.T01:CDS
TGTGTGACAGTTCCACCACT+TGG 0.562590 1:-22441974 MsG0180001515.01.T01:CDS
GTGGGACAAGCTTTCCCAGT+TGG 0.564511 1:-22442054 MsG0180001515.01.T01:CDS
TTGAACATTGACTTGTACGG+TGG 0.566100 1:-22442073 MsG0180001515.01.T01:CDS
AAATGTTGGTTTAAGTGTGA+AGG 0.566331 1:-22442302 MsG0180001515.01.T01:CDS
TGAAGTGACTTCAAAGAAGT+GGG 0.567464 1:+22441397 None:intergenic
GCAAGGTTTCCTAAGCTACA+GGG 0.568643 1:-22442274 MsG0180001515.01.T01:CDS
AACATCTCAAGGGATGGAAA+AGG 0.570214 1:+22441842 None:intergenic
ATACGTAGGTCCTTGAGATA+AGG 0.570634 1:+22441944 None:intergenic
ATACAAGTGTCCTGAACTGA+GGG 0.571811 1:-22441732 MsG0180001515.01.T01:CDS
TCCAATAGTATTCAATGTGT+AGG 0.575351 1:+22442698 None:intergenic
TCTATGGAAGAAAGATGGCT+AGG 0.576660 1:+22441701 None:intergenic
CATACCTTTCTTCTAAAACA+GGG 0.580784 1:+22440621 None:intergenic
CATTCTTGCCTCCTGAAACG+TGG 0.580845 1:-22441351 MsG0180001515.01.T01:CDS
TGATGACTCGCTTAAAGGGA+AGG 0.581589 1:-22442137 MsG0180001515.01.T01:CDS
AAAACCATCCAGTGGGAAGG+AGG 0.582138 1:+22441273 None:intergenic
CTCAAATTGCAACATCTCAA+GGG 0.583015 1:+22441832 None:intergenic
ACCATTCTACCGGATTCAGT+TGG 0.583295 1:-22442583 MsG0180001515.01.T01:CDS
CCCTTATATCACTACCTCAA+CGG 0.583405 1:-22441132 MsG0180001515.01.T01:CDS
CACACACAACCTTCCAAGTG+TGG 0.587878 1:+22442633 None:intergenic
CAGCAATTGCTCCTTCAACA+AGG 0.593638 1:+22440892 None:intergenic
TTGAATTTAGACGGTAGCTG+TGG 0.596623 1:-22441304 MsG0180001515.01.T01:CDS
GGAAACAAGCCATCTTGTAA+GGG 0.598623 1:+22441782 None:intergenic
TGGACAGCTACCTTATCTCA+AGG 0.599795 1:-22441954 MsG0180001515.01.T01:CDS
AAGGGATGGAAAAGGTTGAA+AGG 0.600123 1:+22441850 None:intergenic
TATATCACTACCTCAACGGA+TGG 0.603077 1:-22441128 MsG0180001515.01.T01:CDS
TAAGGTAGCTGTCCAAGTGG+TGG 0.603183 1:+22441962 None:intergenic
CTAGAGTTTGCACTATGTGA+AGG 0.603569 1:-22441058 MsG0180001515.01.T01:CDS
CAAACTTTCAAGATTGGTGA+GGG 0.605411 1:+22441102 None:intergenic
AATGTGTAGGAAGCTTCTCA+AGG 0.606340 1:+22442711 None:intergenic
TATACAAGTGTCCTGAACTG+AGG 0.610299 1:-22441733 MsG0180001515.01.T01:CDS
CCAGTAACTTTAGAGAGGAA+GGG 0.612453 1:+22440657 None:intergenic
GAAGTGGGTAGACCTTCCAC+TGG 0.612646 1:+22441412 None:intergenic
GTGAGGGTGTCCATCCGTTG+AGG 0.616163 1:+22441118 None:intergenic
AGATTGAACATTGACTTGTA+CGG 0.616591 1:-22442076 MsG0180001515.01.T01:CDS
GCAGAACGTCATTGACGTTG+TGG 0.616967 1:-22442230 MsG0180001515.01.T01:CDS
ACAAACTTTCAAGATTGGTG+AGG 0.617188 1:+22441101 None:intergenic
ATGCCGCCATTAATTGAATG+GGG 0.619843 1:-22440977 MsG0180001515.01.T01:CDS
TGAACATTGACTTGTACGGT+GGG 0.624769 1:-22442072 MsG0180001515.01.T01:CDS
CAAGGTTTCCTAAGCTACAG+GGG 0.626564 1:-22442273 MsG0180001515.01.T01:CDS
AGGAAAACCATCCAGTGGGA+AGG 0.626622 1:+22441270 None:intergenic
GAAGAATCTCCCAACCAACT+GGG 0.629493 1:+22442040 None:intergenic
GATGATTTAATACCCACACT+TGG 0.633298 1:-22442646 MsG0180001515.01.T01:CDS
AATGCCCAGTAACTTTAGAG+AGG 0.637553 1:+22440652 None:intergenic
AATCTCTTTAGGTCTGTTGG+GGG 0.637819 1:+22442094 None:intergenic
TAATTGCTCCACGTTTCAGG+AGG 0.637978 1:+22441343 None:intergenic
ACACACAACCTTCCAAGTGT+GGG 0.649557 1:+22442634 None:intergenic
GAACGTCATTGACGTTGTGG+AGG 0.652768 1:-22442227 MsG0180001515.01.T01:CDS
ACAACTTGAGTCCTTGTCAG+AGG 0.656536 1:-22440756 MsG0180001515.01.T01:CDS
GCTTAGGAAAACCATCCAGT+GGG 0.660511 1:+22441266 None:intergenic
AGCTTAGGAAAACCATCCAG+TGG 0.665952 1:+22441265 None:intergenic
AGGTAACATGACCTCTGACA+AGG 0.666258 1:+22440745 None:intergenic
AAACCCCATTCAATTAATGG+CGG 0.677087 1:+22440974 None:intergenic
ACTTATTGACAGAAACACCA+AGG 0.681052 1:+22440862 None:intergenic
CAAGTGTTTCAAGAGAGGAG+AGG 0.688679 1:+22440795 None:intergenic
CAGTGAGAGATGGAAGACCG+TGG 0.692644 1:+22441440 None:intergenic
AGATAAGGTAGCTGTCCAAG+TGG 0.708526 1:+22441959 None:intergenic
TCGACATACCTGTTATACGT+AGG 0.715052 1:+22441930 None:intergenic
GAGGAATTAACGCTACAATG+GGG 0.743089 1:-22442169 MsG0180001515.01.T01:CDS
TACAAGTGTCCTGAACTGAG+GGG 0.768153 1:-22441731 MsG0180001515.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAATATAGATATCTC+TGG - Chr1:22441689-22441708 MsG0180001515.01.T01:CDS 15.0%
!! AATAGAAATTGTTTGTAATT+TGG + Chr1:22442283-22442302 None:intergenic 15.0%
!! ACAAAATTTCTTATCTATAA+CGG - Chr1:22440627-22440646 MsG0180001515.01.T01:CDS 15.0%
!! ATAGAAATTGTTTGTAATTT+GGG + Chr1:22442282-22442301 None:intergenic 15.0%
!!! AGATATCTATATTTTTATTG+AGG + Chr1:22441688-22441707 None:intergenic 15.0%
!! GAAGAGAAAAAAAAATATTG+AGG - Chr1:22441113-22441132 MsG0180001515.01.T01:CDS 20.0%
!!! ACAATTTTGAAAGATAAGTA+AGG + Chr1:22442359-22442378 None:intergenic 20.0%
!!! ACTTTAACTGTTTTTATAGT+AGG - Chr1:22440970-22440989 MsG0180001515.01.T01:CDS 20.0%
!!! ATGAAAATACACAAAGTTTT+TGG + Chr1:22442143-22442162 None:intergenic 20.0%
!!! ATTTTTTTTTCTCTTCAAGT+TGG + Chr1:22441109-22441128 None:intergenic 20.0%
! AAATTTCTTATCTATAACGG+TGG - Chr1:22440630-22440649 MsG0180001515.01.T01:CDS 25.0%
! AATTTGAGAACATGTCAAAT+TGG - Chr1:22441484-22441503 MsG0180001515.01.T01:intron 25.0%
! ACTTAAGTCAATTTCTTCTA+TGG + Chr1:22441619-22441638 None:intergenic 25.0%
! ACTTCATATTTATGATTGCA+AGG - Chr1:22441921-22441940 MsG0180001515.01.T01:CDS 25.0%
! ATTAACTTTCCAATATGTTC+TGG + Chr1:22440871-22440890 None:intergenic 25.0%
!! TAGAAGAAATTGACTTAAGT+TGG - Chr1:22441619-22441638 MsG0180001515.01.T01:intron 25.0%
!!! AAAATACACAAAGTTTTTGG+AGG + Chr1:22442140-22442159 None:intergenic 25.0%
!!! AAATACACAAAGTTTTTGGA+GGG + Chr1:22442139-22442158 None:intergenic 25.0%
!!! TGAACTTTCTGAAACAAAAA+TGG + Chr1:22442100-22442119 None:intergenic 25.0%
!!! TTGTCATTTATTTCTATCAC+AGG + Chr1:22442747-22442766 None:intergenic 25.0%
AAAAGGTTGAAAGGAAGAAT+TGG + Chr1:22441445-22441464 None:intergenic 30.0%
AAAATCAAGTGTTTCAAGAG+AGG + Chr1:22442514-22442533 None:intergenic 30.0%
AACCATTAATGACAAGATCT+TGG + Chr1:22442062-22442081 None:intergenic 30.0%
AATGGTGATATTGCTATAGT+TGG + Chr1:22440704-22440723 None:intergenic 30.0%
AGTCAATGTTCAATCTCTTT+AGG + Chr1:22441221-22441240 None:intergenic 30.0%
ATGAAATGCTTAGATGGAAA+TGG - Chr1:22442474-22442493 MsG0180001515.01.T01:CDS 30.0%
ATTCTACTGAAAAGTTCCAA+TGG - Chr1:22441720-22441739 MsG0180001515.01.T01:CDS 30.0%
CTTGTCATTAATGGTTGTAT+TGG - Chr1:22442066-22442085 MsG0180001515.01.T01:CDS 30.0%
GAAATTGTTTGTAATTTGGG+AGG + Chr1:22442279-22442298 None:intergenic 30.0%
GAGATACAAACTTTCAAGAT+TGG + Chr1:22442208-22442227 None:intergenic 30.0%
TATAACAGGTATGTCGATAT+TGG - Chr1:22441377-22441396 MsG0180001515.01.T01:CDS 30.0%
TATTGTTAACACCTTGTTGA+AGG - Chr1:22442398-22442417 MsG0180001515.01.T01:CDS 30.0%
TCCAATAGTATTCAATGTGT+AGG + Chr1:22440606-22440625 None:intergenic 30.0%
TCCTACACATTGAATACTAT+TGG - Chr1:22440602-22440621 MsG0180001515.01.T01:CDS 30.0%
TGAAATGCTTAGATGGAAAT+GGG - Chr1:22442475-22442494 MsG0180001515.01.T01:CDS 30.0%
TGTATAACTTCAGAGCTTTA+AGG + Chr1:22441554-22441573 None:intergenic 30.0%
TTGAAAGATAAGTAAGGCTT+TGG + Chr1:22442353-22442372 None:intergenic 30.0%
TTTCTTCTATGGAAGAAAGA+TGG + Chr1:22441608-22441627 None:intergenic 30.0%
! AAAATAAAGTGTTTCGAGAG+AGG + Chr1:22442583-22442602 None:intergenic 30.0%
! AAAGGTATGAAAATGAGAGA+GGG - Chr1:22442694-22442713 MsG0180001515.01.T01:CDS 30.0%
! TCAAGTTCAACAATTTGCTT+TGG + Chr1:22440940-22440959 None:intergenic 30.0%
! TCTGAAATGAAATGCTTAGA+TGG - Chr1:22442468-22442487 MsG0180001515.01.T01:CDS 30.0%
!! AAATGTTGGTTTAAGTGTGA+AGG - Chr1:22440999-22441018 MsG0180001515.01.T01:CDS 30.0%
!! AGATTGAACATTGACTTGTA+CGG - Chr1:22441225-22441244 MsG0180001515.01.T01:CDS 30.0%
!! CATACCTTTCTTCTAAAACA+GGG + Chr1:22442683-22442702 None:intergenic 30.0%
!! TCATACCTTTCTTCTAAAAC+AGG + Chr1:22442684-22442703 None:intergenic 30.0%
!!! CTTTTGGAGTTGAATTTAGA+CGG - Chr1:22441988-22442007 MsG0180001515.01.T01:CDS 30.0%
AAACCCCATTCAATTAATGG+CGG + Chr1:22442330-22442349 None:intergenic 35.0%
AAAGTGATGACTCGCTTAAA+GGG - Chr1:22441160-22441179 MsG0180001515.01.T01:CDS 35.0%
AACTGCTGCTCAAAATCATT+TGG + Chr1:22441822-22441841 None:intergenic 35.0%
AAGGTATGAAAATGAGAGAG+GGG - Chr1:22442695-22442714 MsG0180001515.01.T01:CDS 35.0%
ACAAACTTTCAAGATTGGTG+AGG + Chr1:22442203-22442222 None:intergenic 35.0%
ACATGTCAAATTGGAAGGAA+TGG - Chr1:22441493-22441512 MsG0180001515.01.T01:intron 35.0%
ACTGCTGCTCAAAATCATTT+GGG + Chr1:22441821-22441840 None:intergenic 35.0%
ACTTATTGACAGAAACACCA+AGG + Chr1:22442442-22442461 None:intergenic 35.0%
ATAGTAGGCAAGCAAAATGT+TGG - Chr1:22440985-22441004 MsG0180001515.01.T01:CDS 35.0%
ATGAAGTGACTTCAAAGAAG+TGG + Chr1:22441908-22441927 None:intergenic 35.0%
ATGTCGATATTGGAGACAAT+TGG - Chr1:22441387-22441406 MsG0180001515.01.T01:CDS 35.0%
ATTTAATACCCACACTTGGA+AGG - Chr1:22440659-22440678 MsG0180001515.01.T01:CDS 35.0%
CAAACTTTCAAGATTGGTGA+GGG + Chr1:22442202-22442221 None:intergenic 35.0%
CTCAAATTGCAACATCTCAA+GGG + Chr1:22441472-22441491 None:intergenic 35.0%
CTCCAAGATCTTGTCATTAA+TGG - Chr1:22442057-22442076 MsG0180001515.01.T01:CDS 35.0%
GATGATTTAATACCCACACT+TGG - Chr1:22440655-22440674 MsG0180001515.01.T01:CDS 35.0%
GTTATATCCTTCAGTAGAGA+CGG + Chr1:22441767-22441786 None:intergenic 35.0%
TACTTGTCTGATCGATATCA+AGG + Chr1:22440906-22440925 None:intergenic 35.0%
TAGCAATATCACCATTCTAC+CGG - Chr1:22440708-22440727 MsG0180001515.01.T01:CDS 35.0%
TCAATCTCTTTAGGTCTGTT+GGG + Chr1:22441212-22441231 None:intergenic 35.0%
TCCAATATGTTCTGGCAATT+CGG + Chr1:22440863-22440882 None:intergenic 35.0%
TCTCAAATTGCAACATCTCA+AGG + Chr1:22441473-22441492 None:intergenic 35.0%
TGAAGTGACTTCAAAGAAGT+GGG + Chr1:22441907-22441926 None:intergenic 35.0%
TGAGAACATGTCAAATTGGA+AGG - Chr1:22441488-22441507 MsG0180001515.01.T01:intron 35.0%
TGAGGAATTAACGCTACAAT+GGG - Chr1:22441131-22441150 MsG0180001515.01.T01:CDS 35.0%
TGGAAACCCCATTCAATTAA+TGG + Chr1:22442333-22442352 None:intergenic 35.0%
TTCAATCTCTTTAGGTCTGT+TGG + Chr1:22441213-22441232 None:intergenic 35.0%
TTGAGGAATTAACGCTACAA+TGG - Chr1:22441130-22441149 MsG0180001515.01.T01:CDS 35.0%
! ACGCACAATTTTCAATGCAA+AGG + Chr1:22441305-22441324 None:intergenic 35.0%
! CATTAATGGTTGTATTGGTC+TGG - Chr1:22442071-22442090 MsG0180001515.01.T01:CDS 35.0%
! CGCACAATTTTCAATGCAAA+GGG + Chr1:22441304-22441323 None:intergenic 35.0%
! GAAAGGTATGAAAATGAGAG+AGG - Chr1:22442693-22442712 MsG0180001515.01.T01:CDS 35.0%
!! CATAGTGCAAACTCTAGTTT+TGG + Chr1:22442240-22442259 None:intergenic 35.0%
!!! AATGCCCTGTTTTAGAAGAA+AGG - Chr1:22442676-22442695 MsG0180001515.01.T01:CDS 35.0%
!!! CAAACTCTAGTTTTGGAAGA+TGG + Chr1:22442233-22442252 None:intergenic 35.0%
AAAATGAGAGAGGGGAGAAT+TGG - Chr1:22442703-22442722 MsG0180001515.01.T01:CDS 40.0%
AACATCTCAAGGGATGGAAA+AGG + Chr1:22441462-22441481 None:intergenic 40.0%
AAGGGATGGAAAAGGTTGAA+AGG + Chr1:22441454-22441473 None:intergenic 40.0%
AATAACTTCCCCTGTAGCTT+AGG + Chr1:22441039-22441058 None:intergenic 40.0%
AATCTCTTTAGGTCTGTTGG+GGG + Chr1:22441210-22441229 None:intergenic 40.0%
AATGTGTAGGAAGCTTCTCA+AGG + Chr1:22440593-22440612 None:intergenic 40.0%
AATTGCAACATCTCAAGGGA+TGG + Chr1:22441468-22441487 None:intergenic 40.0%
ACAATTGGTCCAGAGTTCTA+TGG - Chr1:22441402-22441421 MsG0180001515.01.T01:CDS 40.0%
ACCAAATTGCCAACTGAATC+CGG + Chr1:22440730-22440749 None:intergenic 40.0%
ACCGAATTGCCAGAACATAT+TGG - Chr1:22440859-22440878 MsG0180001515.01.T01:CDS 40.0%
AGATGCCGCCATTAATTGAA+TGG - Chr1:22442322-22442341 MsG0180001515.01.T01:CDS 40.0%
AGGAAACAAGCCATCTTGTA+AGG + Chr1:22441523-22441542 None:intergenic 40.0%
ATACAAGTGTCCTGAACTGA+GGG - Chr1:22441569-22441588 MsG0180001515.01.T01:intron 40.0%
ATACGTAGGTCCTTGAGATA+AGG + Chr1:22441360-22441379 None:intergenic 40.0%
ATGACAAGATCTTGGAGCTT+AGG + Chr1:22442054-22442073 None:intergenic 40.0%
ATGCCGCCATTAATTGAATG+GGG - Chr1:22442324-22442343 MsG0180001515.01.T01:CDS 40.0%
CAATCTCTTTAGGTCTGTTG+GGG + Chr1:22441211-22441230 None:intergenic 40.0%
CCCTTATATCACTACCTCAA+CGG - Chr1:22442169-22442188 MsG0180001515.01.T01:CDS 40.0%
CCGTTGAGGTAGTGATATAA+GGG + Chr1:22442172-22442191 None:intergenic 40.0%
CTAGAGTTTGCACTATGTGA+AGG - Chr1:22442243-22442262 MsG0180001515.01.T01:CDS 40.0%
GAAAGTGATGACTCGCTTAA+AGG - Chr1:22441159-22441178 MsG0180001515.01.T01:CDS 40.0%
GACAGAAACACCAAGGAAAT+TGG + Chr1:22442435-22442454 None:intergenic 40.0%
GAGGAATTAACGCTACAATG+GGG - Chr1:22441132-22441151 MsG0180001515.01.T01:CDS 40.0%
GATGCCGCCATTAATTGAAT+GGG - Chr1:22442323-22442342 MsG0180001515.01.T01:CDS 40.0%
GGAAACAAGCCATCTTGTAA+GGG + Chr1:22441522-22441541 None:intergenic 40.0%
TATACAAGTGTCCTGAACTG+AGG - Chr1:22441568-22441587 MsG0180001515.01.T01:intron 40.0%
TATATCACTACCTCAACGGA+TGG - Chr1:22442173-22442192 MsG0180001515.01.T01:CDS 40.0%
TCAAGGTTTGCAAGTAGTAG+AGG + Chr1:22440816-22440835 None:intergenic 40.0%
TCCGTTGAGGTAGTGATATA+AGG + Chr1:22442173-22442192 None:intergenic 40.0%
TCGACATACCTGTTATACGT+AGG + Chr1:22441374-22441393 None:intergenic 40.0%
TCTATGGAAGAAAGATGGCT+AGG + Chr1:22441603-22441622 None:intergenic 40.0%
TTGAATTTAGACGGTAGCTG+TGG - Chr1:22441997-22442016 MsG0180001515.01.T01:CDS 40.0%
! AATGCCCAGTAACTTTAGAG+AGG + Chr1:22442652-22442671 None:intergenic 40.0%
! CACAGGAATGTGAGCAATTT+TGG + Chr1:22442730-22442749 None:intergenic 40.0%
! CCAGTAACTTTAGAGAGGAA+GGG + Chr1:22442647-22442666 None:intergenic 40.0%
! TAAAGTGTTTCGAGAGAGGA+AGG + Chr1:22442579-22442598 None:intergenic 40.0%
!! AAAGTTTTTGGAGGGTTGAG+GGG + Chr1:22442131-22442150 None:intergenic 40.0%
!! AACTTCAGAGCTTTAAGGCA+AGG + Chr1:22441549-22441568 None:intergenic 40.0%
!! ACAAAGTTTTTGGAGGGTTG+AGG + Chr1:22442133-22442152 None:intergenic 40.0%
!! AGAGCTTTAAGGCAAGGAAA+AGG + Chr1:22441543-22441562 None:intergenic 40.0%
!! CAAAGTTTTTGGAGGGTTGA+GGG + Chr1:22442132-22442151 None:intergenic 40.0%
!! CCTTCCTCTCTAAAGTTACT+GGG - Chr1:22442645-22442664 MsG0180001515.01.T01:CDS 40.0%
!! TGAACATTGACTTGTACGGT+GGG - Chr1:22441229-22441248 MsG0180001515.01.T01:CDS 40.0%
!! TGCAAACCTTGATTTTAGCG+TGG - Chr1:22440824-22440843 MsG0180001515.01.T01:CDS 40.0%
!! TTGAACATTGACTTGTACGG+TGG - Chr1:22441228-22441247 MsG0180001515.01.T01:CDS 40.0%
!!! ACTCTAGTTTTGGAAGATGG+TGG + Chr1:22442230-22442249 None:intergenic 40.0%
ACAACTTGAGTCCTTGTCAG+AGG - Chr1:22442545-22442564 MsG0180001515.01.T01:CDS 45.0%
ACAAGCTTTCCCAGTTGGTT+GGG - Chr1:22441252-22441271 MsG0180001515.01.T01:CDS 45.0%
ACACACAACCTTCCAAGTGT+GGG + Chr1:22440670-22440689 None:intergenic 45.0%
ACCATTCTACCGGATTCAGT+TGG - Chr1:22440718-22440737 MsG0180001515.01.T01:CDS 45.0%
ACCGGATTCAGTTGGCAATT+TGG - Chr1:22440726-22440745 MsG0180001515.01.T01:CDS 45.0%
ACTGGAAATGCAGTGAGAGA+TGG + Chr1:22441874-22441893 None:intergenic 45.0%
AGATAAGGTAGCTGTCCAAG+TGG + Chr1:22441345-22441364 None:intergenic 45.0%
AGCTTAGGAAAACCATCCAG+TGG + Chr1:22442039-22442058 None:intergenic 45.0%
AGGTAACATGACCTCTGACA+AGG + Chr1:22442559-22442578 None:intergenic 45.0%
ATCTCTCACTGCATTTCCAG+TGG - Chr1:22441873-22441892 MsG0180001515.01.T01:CDS 45.0%
CAAGGTTTCCTAAGCTACAG+GGG - Chr1:22441028-22441047 MsG0180001515.01.T01:CDS 45.0%
CAAGTGTTTCAAGAGAGGAG+AGG + Chr1:22442509-22442528 None:intergenic 45.0%
CAGCAATTGCTCCTTCAACA+AGG + Chr1:22442412-22442431 None:intergenic 45.0%
CCAACTATGCCATAGAACTC+TGG + Chr1:22441414-22441433 None:intergenic 45.0%
CCAGAGTTCTATGGCATAGT+TGG - Chr1:22441411-22441430 MsG0180001515.01.T01:CDS 45.0%
CTCAAGGACCTACGTATAAC+AGG - Chr1:22441363-22441382 MsG0180001515.01.T01:CDS 45.0%
CTGAAAAGTTCCAATGGTCG+TGG - Chr1:22441726-22441745 MsG0180001515.01.T01:CDS 45.0%
GAAGAATCTCCCAACCAACT+GGG + Chr1:22441264-22441283 None:intergenic 45.0%
GAATGGCTTCCCTTACAAGA+TGG - Chr1:22441510-22441529 MsG0180001515.01.T01:intron 45.0%
GAGTTCTATGGCATAGTTGG+AGG - Chr1:22441414-22441433 MsG0180001515.01.T01:CDS 45.0%
GCAAGGTTTCCTAAGCTACA+GGG - Chr1:22441027-22441046 MsG0180001515.01.T01:CDS 45.0%
GCAATTGCTGCCAATTTCCT+TGG - Chr1:22442422-22442441 MsG0180001515.01.T01:CDS 45.0%
GCTTAGGAAAACCATCCAGT+GGG + Chr1:22442038-22442057 None:intergenic 45.0%
GTGTAATTGCTCCACGTTTC+AGG + Chr1:22441964-22441983 None:intergenic 45.0%
TAAGTGTGAAGGAGCTTGCA+AGG - Chr1:22441010-22441029 MsG0180001515.01.T01:CDS 45.0%
TAATTGCTCCACGTTTCAGG+AGG + Chr1:22441961-22441980 None:intergenic 45.0%
TACAAGTGTCCTGAACTGAG+GGG - Chr1:22441570-22441589 MsG0180001515.01.T01:intron 45.0%
TAGAGGTTGCATGTTGTGTC+AGG + Chr1:22440799-22440818 None:intergenic 45.0%
TGAAGAATCTCCCAACCAAC+TGG + Chr1:22441265-22441284 None:intergenic 45.0%
TGAGCACCACGCTAAAATCA+AGG + Chr1:22440833-22440852 None:intergenic 45.0%
TGATGACTCGCTTAAAGGGA+AGG - Chr1:22441164-22441183 MsG0180001515.01.T01:CDS 45.0%
TGATTCACCGTCTCTACTGA+AGG - Chr1:22441757-22441776 MsG0180001515.01.T01:CDS 45.0%
TGCAAGGTTTCCTAAGCTAC+AGG - Chr1:22441026-22441045 MsG0180001515.01.T01:CDS 45.0%
TGGACAGCTACCTTATCTCA+AGG - Chr1:22441347-22441366 MsG0180001515.01.T01:CDS 45.0%
TTCTATGGCATAGTTGGAGG+AGG - Chr1:22441417-22441436 MsG0180001515.01.T01:CDS 45.0%
! CCCAGTAACTTTAGAGAGGA+AGG + Chr1:22442648-22442667 None:intergenic 45.0%
!! CCCTTCCTCTCTAAAGTTAC+TGG - Chr1:22442644-22442663 MsG0180001515.01.T01:CDS 45.0%
!! GAGCAATTACACGTCGCTTT+TGG - Chr1:22441972-22441991 MsG0180001515.01.T01:CDS 45.0%
!!! CTTGACCTTTTGAGACTCCA+CGG - Chr1:22441844-22441863 MsG0180001515.01.T01:CDS 45.0%
AAAACCATCCAGTGGGAAGG+AGG + Chr1:22442031-22442050 None:intergenic 50.0%
AGGAAAACCATCCAGTGGGA+AGG + Chr1:22442034-22442053 None:intergenic 50.0%
CAACGTCAATGACGTTCTGC+AGG + Chr1:22441071-22441090 None:intergenic 50.0%
CACACACAACCTTCCAAGTG+TGG + Chr1:22440671-22440690 None:intergenic 50.0%
CATTCTTGCCTCCTGAAACG+TGG - Chr1:22441950-22441969 MsG0180001515.01.T01:CDS 50.0%
CTCACTGCATTTCCAGTGGA+AGG - Chr1:22441877-22441896 MsG0180001515.01.T01:CDS 50.0%
GAACGTCATTGACGTTGTGG+AGG - Chr1:22441074-22441093 MsG0180001515.01.T01:CDS 50.0%
GAAGACCGTGGAGTCTCAAA+AGG + Chr1:22441852-22441871 None:intergenic 50.0%
GACAAGCTTTCCCAGTTGGT+TGG - Chr1:22441251-22441270 MsG0180001515.01.T01:CDS 50.0%
GAGGAAGGGAGATTGTGTTC+TGG + Chr1:22442633-22442652 None:intergenic 50.0%
GCAGAACGTCATTGACGTTG+TGG - Chr1:22441071-22441090 MsG0180001515.01.T01:CDS 50.0%
GCCAACTGAATCCGGTAGAA+TGG + Chr1:22440722-22440741 None:intergenic 50.0%
TAAGGTAGCTGTCCAAGTGG+TGG + Chr1:22441342-22441361 None:intergenic 50.0%
TGTGTGACAGTTCCACCACT+TGG - Chr1:22441327-22441346 MsG0180001515.01.T01:CDS 50.0%
TTCACTTTCCTCCTTCCCAC+TGG - Chr1:22442020-22442039 MsG0180001515.01.T01:CDS 50.0%
TTGGAGGGTTGAGGGGTTAT+AGG + Chr1:22442124-22442143 None:intergenic 50.0%
!! AAGTTGGTGTGACCGTCTCT+TGG - Chr1:22441635-22441654 MsG0180001515.01.T01:intron 50.0%
CAACACCACCTGCTCTGCAT+TGG - Chr1:22441658-22441677 MsG0180001515.01.T01:intron 55.0%
CACTCTCAAGCCACGACCAT+TGG + Chr1:22441739-22441758 None:intergenic 55.0%
CAGTGAGAGATGGAAGACCG+TGG + Chr1:22441864-22441883 None:intergenic 55.0%
CTTTCCTCCTTCCCACTGGA+TGG - Chr1:22442024-22442043 MsG0180001515.01.T01:CDS 55.0%
GAAGTGGGTAGACCTTCCAC+TGG + Chr1:22441892-22441911 None:intergenic 55.0%
GGCAAATGTCCCCTCAGTTC+AGG + Chr1:22441582-22441601 None:intergenic 55.0%
GTGGGACAAGCTTTCCCAGT+TGG - Chr1:22441247-22441266 MsG0180001515.01.T01:CDS 55.0%
!! CAGGTGGTGTTGCCAAGAGA+CGG + Chr1:22441650-22441669 None:intergenic 55.0%
GAGAGCCAATGCAGAGCAGG+TGG + Chr1:22441666-22441685 None:intergenic 60.0%
GAGGAGAGCCAATGCAGAGC+AGG + Chr1:22441669-22441688 None:intergenic 60.0%
!! GTGAGGGTGTCCATCCGTTG+AGG + Chr1:22442186-22442205 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 22440544 22442779 22440544 ID=MsG0180001515.01;Name=MsG0180001515.01
Chr1 mRNA 22440544 22442779 22440544 ID=MsG0180001515.01.T01;Parent=MsG0180001515.01;Name=MsG0180001515.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|678
Chr1 exon 22441683 22442779 22441683 ID=MsG0180001515.01.T01:exon:398;Parent=MsG0180001515.01.T01
Chr1 exon 22440544 22441483 22440544 ID=MsG0180001515.01.T01:exon:399;Parent=MsG0180001515.01.T01
Chr1 CDS 22441683 22442779 22441683 ID=MsG0180001515.01.T01:cds;Parent=MsG0180001515.01.T01
Chr1 CDS 22440544 22441483 22440544 ID=MsG0180001515.01.T01:cds;Parent=MsG0180001515.01.T01
Gene Sequence

>MsG0180001515.01.T01

ATGTACGACATTTTCAAGAAGTTTAAGATTTTCGACAAATTCAAATCCTTGAGAAGCTTCCTACACATTGAATACTATTGGAAACAAAATTTCTTATCTATAACGGTGGTTGATGATTTAATACCCACACTTGGAAGGTTGTGTGTGTTATCATTATCCAACTATAGCAATATCACCATTCTACCGGATTCAGTTGGCAATTTGGTTCAGTTGCGCTATCTAGATCTCTCACAGACTAAAATCAAAACTTTGCCTGACACAACATGCAACCTCTACTACTTGCAAACCTTGATTTTAGCGTGGTGCTCAAATCTCACCGAATTGCCAGAACATATTGGAAAGTTAATTAATTTACGTCACCTTGATATCGATCAGACAAGTATAACAGTGTTGCCAAAGCAAATTGTTGAACTTGAAAATCTTCAAACTTTAACTGTTTTTATAGTAGGCAAGCAAAATGTTGGTTTAAGTGTGAAGGAGCTTGCAAGGTTTCCTAAGCTACAGGGGAAGTTATTCATCAAGAACCTGCAGAACGTCATTGACGTTGTGGAGGCACATGATTCCAACTTGAAGAGAAAAAAAAATATTGAGGAATTAACGCTACAATGGGGCGATGAAAGTGATGACTCGCTTAAAGGGAAGGATGTGCTTGATATGTTGCAACCCCCAACAGACCTAAAGAGATTGAACATTGACTTGTACGGTGGGACAAGCTTTCCCAGTTGGTTGGGAGATTCTTCATTTTCTAAATTGTTGTCCCTTTGCATTGAAAATTGTGCGTACTGTGTGACAGTTCCACCACTTGGACAGCTACCTTATCTCAAGGACCTACGTATAACAGGTATGTCGATATTGGAGACAATTGGTCCAGAGTTCTATGGCATAGTTGGAGGAGGTTCCAATTCTTCCTTTCAACCTTTTCCATCCCTTGAGATGTTGCAATTTGAGAACATGTCAAATTGGAAGGAATGGCTTCCCTTACAAGATGGCTTGTTTCCTTTTCCTTGCCTTAAAGCTCTGAAGTTATACAAGTGTCCTGAACTGAGGGGACATTTGCCTAGCCATCTTTCTTCCATAGAAGAAATTGACTTAAGTTGTTGTCTTGACCTTTTGAGACTCCACGGTCTTCCATCTCTCACTGCATTTCCAGTGGAAGGTCTACCCACTTCTTTGAAGTCACTTCATATTTATGATTGCAAGGAGTTATCATTCTTGCCTCCTGAAACGTGGAGCAATTACACGTCGCTTTTGGAGTTGAATTTAGACGGTAGCTGTGGTTCACTTTCCTCCTTCCCACTGGATGGTTTTCCTAAGCTCCAAGATCTTGTCATTAATGGTTGTATTGGTCTGGAATCCATTTTTGTTTCAGAAAGTTCATCCTATAACCCCTCAACCCTCCAAAAACTTTGTGTATTTTCATGTAAAGCCCTTATATCACTACCTCAACGGATGGACACCCTCACCAATCTTGAAAGTTTGTATCTCCACCATCTTCCAAAACTAGAGTTTGCACTATGTGAAGGAGTTTTCTTACCTCCCAAATTACAAACAATTTCTATTACATCTGTGAGAATAACAAAGATGCCGCCATTAATTGAATGGGGTTTCCAAAGCCTTACTTATCTTTCAAAATTGTATATTAAAGATAATGATGATATTGTTAACACCTTGTTGAAGGAGCAATTGCTGCCAATTTCCTTGGTGTTTCTGTCAATAAGTAATCTCTCTGAAATGAAATGCTTAGATGGAAATGGGCTTCGACACCTCTCCTCTCTTGAAACACTTGATTTTAATAATTGTCAACAACTTGAGTCCTTGTCAGAGGTCATGTTACCTTCCTCTCTCGAAACACTTTATTTTTATAACTGTCAAAGACTTGAGTCTTTTCCAGAACACAATCTCCCTTCCTCTCTAAAGTTACTGGGCATTTCTAAATGCCCTGTTTTAGAAGAAAGGTATGAAAATGAGAGAGGGGAGAATTGGTCCAAAATTGCTCACATTCCTGTGATAGAAATAAATGACAAAATCACAATATGA

Protein sequence

>MsG0180001515.01.T01

MYDIFKKFKIFDKFKSLRSFLHIEYYWKQNFLSITVVDDLIPTLGRLCVLSLSNYSNITILPDSVGNLVQLRYLDLSQTKIKTLPDTTCNLYYLQTLILAWCSNLTELPEHIGKLINLRHLDIDQTSITVLPKQIVELENLQTLTVFIVGKQNVGLSVKELARFPKLQGKLFIKNLQNVIDVVEAHDSNLKRKKNIEELTLQWGDESDDSLKGKDVLDMLQPPTDLKRLNIDLYGGTSFPSWLGDSSFSKLLSLCIENCAYCVTVPPLGQLPYLKDLRITGMSILETIGPEFYGIVGGGSNSSFQPFPSLEMLQFENMSNWKEWLPLQDGLFPFPCLKALKLYKCPELRGHLPSHLSSIEEIDLSCCLDLLRLHGLPSLTAFPVEGLPTSLKSLHIYDCKELSFLPPETWSNYTSLLELNLDGSCGSLSSFPLDGFPKLQDLVINGCIGLESIFVSESSSYNPSTLQKLCVFSCKALISLPQRMDTLTNLESLYLHHLPKLEFALCEGVFLPPKLQTISITSVRITKMPPLIEWGFQSLTYLSKLYIKDNDDIVNTLLKEQLLPISLVFLSISNLSEMKCLDGNGLRHLSSLETLDFNNCQQLESLSEVMLPSSLETLYFYNCQRLESFPEHNLPSSLKLLGISKCPVLEERYENERGENWSKIAHIPVIEINDKITI*