AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005353.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005353.01.T01 MTR_1g097840 91.000 300 3 1 1 276 1 300 0.0 535
MsG0180005353.01.T01 MTR_1g097840 88.983 236 2 1 1 212 1 236 2.67e-144 405
MsG0180005353.01.T01 MTR_4g006730 56.146 301 97 3 9 276 7 305 4.16e-108 315
MsG0180005353.01.T01 MTR_2g104940 56.000 300 96 5 13 276 11 310 2.61e-105 308
MsG0180005353.01.T01 MTR_4g006630 66.364 220 66 2 63 276 1 218 2.76e-98 287
MsG0180005353.01.T01 MTR_4g006730 66.364 220 66 2 63 276 1 218 6.92e-98 286
MsG0180005353.01.T01 MTR_4g006730 55.844 231 75 1 9 212 7 237 8.98e-79 239
MsG0180005353.01.T01 MTR_8g087710 49.558 226 103 3 54 276 43 260 1.00e-66 209
MsG0180005353.01.T01 MTR_8g087720 48.899 227 103 3 54 276 42 259 1.17e-66 209
MsG0180005353.01.T01 MTR_2g017610 49.558 226 103 3 54 276 42 259 2.70e-65 205
MsG0180005353.01.T01 MTR_2g017660 52.174 207 98 1 54 259 43 249 2.74e-65 205
MsG0180005353.01.T01 MTR_2g017570 49.558 226 103 3 54 276 42 259 5.82e-65 204
MsG0180005353.01.T01 MTR_2g017590 48.673 226 105 3 54 276 40 257 2.13e-64 203
MsG0180005353.01.T01 MTR_2g017620 48.673 226 111 2 54 276 28 251 8.88e-64 201
MsG0180005353.01.T01 MTR_2g017620 48.673 226 111 2 54 276 42 265 9.09e-64 201
MsG0180005353.01.T01 MTR_7g010650 44.601 213 118 0 54 266 41 253 2.61e-62 197
MsG0180005353.01.T01 MTR_4g084880 44.737 228 113 4 54 276 39 258 1.01e-58 188
MsG0180005353.01.T01 MTR_5g063930 40.467 257 132 5 28 270 6 255 1.00e-56 183
MsG0180005353.01.T01 MTR_2g017620 49.468 188 86 2 94 276 1 184 1.24e-55 177
MsG0180005353.01.T01 MTR_4g006650 63.571 140 42 1 52 191 6 136 1.58e-51 171
MsG0180005353.01.T01 MTR_1g070385 45.070 213 117 0 51 263 63 275 2.21e-51 180
MsG0180005353.01.T01 MTR_5g079570 43.478 207 115 2 54 259 44 249 9.02e-50 165
MsG0180005353.01.T01 MTR_3g008920 43.333 210 115 3 52 259 28 235 3.06e-46 156
MsG0180005353.01.T01 MTR_8g087720 50.307 163 74 2 54 212 42 201 8.18e-44 148
MsG0180005353.01.T01 MTR_8g087720 47.887 142 69 2 54 192 42 181 4.43e-32 117
MsG0180005353.01.T01 MTR_2g101370 36.325 234 125 7 54 273 24 247 5.48e-32 119
MsG0180005353.01.T01 MTR_7g010650 41.007 139 82 0 54 192 41 179 1.52e-31 116
MsG0180005353.01.T01 MTR_1g006490 35.526 228 128 7 48 263 17 237 1.70e-29 112
MsG0180005353.01.T01 MTR_8g013680 34.100 261 142 9 27 273 2 246 2.84e-29 111
MsG0180005353.01.T01 MTR_1g006590 35.648 216 120 7 48 251 17 225 9.38e-29 110
MsG0180005353.01.T01 MTR_1g115405 33.333 228 132 7 54 267 25 246 2.63e-23 95.9
MsG0180005353.01.T01 MTR_5g012810 35.849 212 116 5 54 251 23 228 9.43e-22 91.7
MsG0180005353.01.T01 MTR_2g094270 29.825 285 153 9 13 263 15 286 7.15e-21 90.1
MsG0180005353.01.T01 MTR_6g069040 28.319 226 154 3 54 271 25 250 4.83e-20 87.0
MsG0180005353.01.T01 MTR_4g063090 31.489 235 138 9 55 274 26 252 1.03e-19 86.3
MsG0180005353.01.T01 MTR_7g023350 31.140 228 137 7 54 267 25 246 4.12e-19 84.7
MsG0180005353.01.T01 MTR_1g077540 30.603 232 144 6 54 271 25 253 2.41e-17 79.7
MsG0180005353.01.T01 MTR_7g103030 31.193 218 139 6 54 262 25 240 3.74e-17 79.3
MsG0180005353.01.T01 MTR_2g094270 29.508 244 138 7 13 235 15 245 8.08e-17 78.6
MsG0180005353.01.T01 MTR_3g118010 28.000 275 164 9 3 258 2 261 1.64e-16 77.8
MsG0180005353.01.T01 MTR_2g060360 30.085 236 138 7 54 275 23 245 1.08e-15 75.1
MsG0180005353.01.T01 MTR_7g101190 27.076 277 167 9 19 273 20 283 1.90e-14 72.0
MsG0180005353.01.T01 MTR_8g098375 27.473 273 166 10 7 261 21 279 3.21e-14 71.6
MsG0180005353.01.T01 MTR_4g415300 27.586 261 158 11 18 261 36 282 5.42e-14 70.9
MsG0180005353.01.T01 MTR_3g070210 26.577 222 146 6 54 258 59 280 8.54e-14 70.5
MsG0180005353.01.T01 MTR_5g010150 26.374 273 169 10 7 261 21 279 1.06e-13 70.1
MsG0180005353.01.T01 MTR_5g082070 27.111 225 146 6 54 261 59 282 2.00e-13 69.3
MsG0180005353.01.T01 MTR_4g059390 26.230 244 144 8 54 263 43 284 9.45e-12 64.3
MsG0180005353.01.T01 MTR_3g070210 27.368 190 124 5 54 229 59 248 3.39e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005353.01.T01 AT4G10380 68.953 277 60 2 25 276 29 304 4.10e-133 379
MsG0180005353.01.T01 AT1G80760 57.667 300 94 5 9 276 7 305 4.36e-108 315
MsG0180005353.01.T01 AT4G19030 49.351 231 103 3 54 276 59 283 1.71e-67 212
MsG0180005353.01.T01 AT5G37820 47.556 225 115 2 54 276 47 270 1.79e-65 206
MsG0180005353.01.T01 AT5G37820 47.556 225 115 2 54 276 83 306 5.97e-65 206
MsG0180005353.01.T01 AT4G18910 46.781 233 106 3 54 276 56 280 3.83e-64 203
MsG0180005353.01.T01 AT5G37810 45.815 227 116 2 54 276 47 270 5.35e-64 202
MsG0180005353.01.T01 AT1G31885 50.235 213 98 2 55 259 48 260 8.95e-62 198
MsG0180005353.01.T01 AT1G31885 49.029 206 97 2 62 259 1 206 3.79e-57 184
MsG0180005353.01.T01 AT2G34390 43.556 225 113 4 54 268 10 230 1.18e-50 167
MsG0180005353.01.T01 AT2G34390 43.556 225 113 4 54 268 52 272 2.49e-50 167
MsG0180005353.01.T01 AT3G06100 40.157 254 135 5 19 261 11 258 1.93e-48 162
MsG0180005353.01.T01 AT3G06100 44.340 212 115 3 54 263 2 212 2.39e-47 158
MsG0180005353.01.T01 AT4G19030 49.398 166 76 2 54 211 59 224 3.62e-44 149
MsG0180005353.01.T01 AT4G18910 48.521 169 75 2 54 212 56 222 5.20e-43 146
MsG0180005353.01.T01 AT4G19030 46.939 147 70 2 54 192 59 205 2.59e-33 121
MsG0180005353.01.T01 AT3G16240 33.716 261 144 9 27 273 2 247 7.30e-31 115
MsG0180005353.01.T01 AT2G34390 41.420 169 86 3 54 212 52 217 1.15e-29 112
MsG0180005353.01.T01 AT2G25810 33.333 240 138 7 48 276 17 245 1.39e-26 104
MsG0180005353.01.T01 AT2G29870 50.485 103 50 1 166 268 22 123 3.10e-26 100
MsG0180005353.01.T01 AT5G47450 34.177 237 133 8 29 251 2 229 1.69e-25 101
MsG0180005353.01.T01 AT4G17340 33.333 237 135 7 29 251 2 229 2.78e-25 101
MsG0180005353.01.T01 AT2G34390 40.397 151 77 3 54 194 52 199 4.72e-23 94.7
MsG0180005353.01.T01 AT3G26520 33.186 226 133 7 54 266 26 246 1.02e-22 94.4
MsG0180005353.01.T01 AT3G06100 39.855 138 82 1 125 261 40 177 1.63e-22 92.4
MsG0180005353.01.T01 AT2G36830 36.818 220 113 9 54 258 25 233 2.98e-22 93.2
MsG0180005353.01.T01 AT4G01470 31.760 233 129 8 54 267 25 246 7.29e-20 86.7
MsG0180005353.01.T01 AT1G17810 27.888 251 163 5 37 269 6 256 2.93e-19 85.5
MsG0180005353.01.T01 AT4G35100 30.252 238 146 7 54 275 42 275 9.62e-17 78.6
MsG0180005353.01.T01 AT4G35100 30.252 238 146 7 54 275 42 275 9.62e-17 78.6
MsG0180005353.01.T01 AT1G73190 27.426 237 154 5 37 255 6 242 1.84e-16 77.8
MsG0180005353.01.T01 AT2G16850 30.252 238 146 7 54 275 40 273 7.72e-16 75.9
MsG0180005353.01.T01 AT5G60660 26.165 279 165 10 4 258 8 269 1.12e-15 75.9
MsG0180005353.01.T01 AT1G31885 43.182 88 50 0 55 142 48 135 1.98e-15 72.0
MsG0180005353.01.T01 AT3G53420 27.869 244 149 8 54 273 43 283 3.56e-14 71.2
MsG0180005353.01.T01 AT3G53420 27.869 244 149 8 54 273 43 283 3.56e-14 71.2
MsG0180005353.01.T01 AT3G54820 26.199 271 164 9 1 248 1 258 3.81e-14 71.2
MsG0180005353.01.T01 AT2G37170 26.165 279 167 10 19 273 18 281 8.87e-14 70.1
MsG0180005353.01.T01 AT2G37170 26.165 279 167 10 19 273 61 324 1.17e-13 70.5
MsG0180005353.01.T01 AT2G45960 26.259 278 174 10 1 261 15 278 6.50e-13 67.8
MsG0180005353.01.T01 AT2G37180 26.639 244 152 8 54 273 41 281 2.86e-12 65.9
MsG0180005353.01.T01 AT1G01620 27.962 211 136 6 54 248 56 266 3.42e-12 65.9
MsG0180005353.01.T01 AT4G00430 25.540 278 177 10 1 261 15 279 4.10e-12 65.5
MsG0180005353.01.T01 AT3G61430 28.000 225 143 8 54 261 56 278 5.52e-12 65.1
MsG0180005353.01.T01 AT3G61430 28.000 225 143 8 54 261 56 278 5.52e-12 65.1
MsG0180005353.01.T01 AT4G23400 28.000 225 143 8 54 261 57 279 7.00e-12 64.7
MsG0180005353.01.T01 AT3G47440 27.897 233 141 6 54 272 27 246 1.71e-11 63.5
MsG0180005353.01.T01 AT1G01620 28.333 180 116 4 82 248 15 194 5.46e-11 61.2

Find 85 sgRNAs with CRISPR-Local

Find 225 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGCATCTCTGGATATATT+TGG 0.216287 1:+90759148 MsG0180005353.01.T01:CDS
GGTGTCCCTGACTCCGATTC+TGG 0.274084 1:-90755066 None:intergenic
TTGTATTTGTTGTTCACTAT+TGG 0.275818 1:-90758098 None:intergenic
CAATGGAGTAGAAACTCTTA+TGG 0.319532 1:+90758118 MsG0180005353.01.T01:CDS
CTTGGTGCTCTAGCTGGTTC+TGG 0.336743 1:+90759182 MsG0180005353.01.T01:CDS
TTGCTCAACATTCTTATCTC+AGG 0.361959 1:+90758707 MsG0180005353.01.T01:CDS
GAACATGTGCCCACGGGAAA+TGG 0.378646 1:-90758250 None:intergenic
ATGAATCCGGTGCGCACCTT+AGG 0.389490 1:+90759101 MsG0180005353.01.T01:CDS
GTTTACCATCCTTTCCTCTC+TGG 0.391500 1:+90758332 MsG0180005353.01.T01:CDS
TGCAATGCAGGTTGGTGAAT+TGG 0.400837 1:+90758658 MsG0180005353.01.T01:intron
ATGTTCATTATTCTATCAAT+TGG 0.408502 1:+90758170 MsG0180005353.01.T01:CDS
ATCACTCACCATTGCCTTCG+CGG 0.410120 1:+90758220 MsG0180005353.01.T01:CDS
TAAGGTGCGCACCGGATTCA+TGG 0.410875 1:-90759099 None:intergenic
CAGGAAATTACAAGCATCTC+TGG 0.418374 1:+90759138 MsG0180005353.01.T01:CDS
TAATTTCCTGCTGCAACGGC+TGG 0.421426 1:-90759125 None:intergenic
CCGACGCTTGGTGCTCTAGC+TGG 0.422426 1:+90759176 MsG0180005353.01.T01:CDS
AAAATGCCAGAATCGGAGTC+AGG 0.425265 1:+90755060 None:intergenic
AATGGCCCTCCGGGAGTATC+CGG 0.425506 1:-90755114 None:intergenic
ATTCTTATAGATGAGAATAA+TGG 0.431504 1:-90755132 None:intergenic
TGCTGCAACGGCTGGACCTA+AGG 0.434795 1:-90759117 None:intergenic
CAACGTGAGTCATTTGCAAT+GGG 0.443310 1:+90755168 MsG0180005353.01.T01:CDS
CGTTATCACGAAGCTTGATA+AGG 0.443454 1:-90759214 None:intergenic
TTCATGGAACCACCGCTTGT+TGG 0.443747 1:-90759083 None:intergenic
CTATCAATTGGTCATATCTC+AGG 0.449732 1:+90758182 MsG0180005353.01.T01:CDS
CTTATCAAGCTTCGTGATAA+CGG 0.463299 1:+90759215 MsG0180005353.01.T01:CDS
CGGAGCTGAACCACATCAAC+CGG 0.464558 1:+90759235 MsG0180005353.01.T01:CDS
ATGGGAAATGCAGCTTGTGC+TGG 0.464614 1:+90758137 MsG0180005353.01.T01:CDS
AATGGAGTAGAAACTCTTAT+GGG 0.469616 1:+90758119 MsG0180005353.01.T01:CDS
GTTATCACGAAGCTTGATAA+GGG 0.481400 1:-90759213 None:intergenic
TAGCGACGGAAGCTCCTAAC+CGG 0.489899 1:-90759254 None:intergenic
CTTGTAATTTCCTGCTGCAA+CGG 0.491803 1:-90759129 None:intergenic
CGGCGTTTCGCCATTTCCCG+TGG 0.493217 1:+90758240 MsG0180005353.01.T01:CDS
ACAGATTGGAGCAGAGTTTG+TGG 0.494648 1:+90758040 MsG0180005353.01.T01:intron
TATTTGGTGGCACCGACGCT+TGG 0.495981 1:+90759164 MsG0180005353.01.T01:CDS
TTAGGTCCAGCCGTTGCAGC+AGG 0.497485 1:+90759119 MsG0180005353.01.T01:CDS
AAGCGGTGGTTCCATGAATC+CGG 0.497866 1:+90759088 MsG0180005353.01.T01:CDS
TACCATCCTTTCCTCTCTGG+TGG 0.500750 1:+90758335 MsG0180005353.01.T01:CDS
CTGAACCACATCAACCGGTT+AGG 0.503676 1:+90759240 MsG0180005353.01.T01:CDS
TGCTCAACATTCTTATCTCA+GGG 0.505305 1:+90758708 MsG0180005353.01.T01:CDS
AGCGTCGGTGCCGGCGACAC+CGG 0.511138 1:+90755095 MsG0180005353.01.T01:CDS
CAGATTGGAGCAGAGTTTGT+GGG 0.519331 1:+90758041 MsG0180005353.01.T01:intron
GAATTGGCTGGTATTGCTGT+TGG 0.524769 1:+90758674 MsG0180005353.01.T01:CDS
GATGAGAATAATGGCCCTCC+GGG 0.524874 1:-90755123 None:intergenic
AGATGAGAATAATGGCCCTC+CGG 0.525358 1:-90755124 None:intergenic
CCGGGAGTATCCGGTGTCGC+CGG 0.538656 1:-90755105 None:intergenic
ACCGACGGCAGCGTCGGTGC+CGG 0.542854 1:+90755086 MsG0180005353.01.T01:CDS
TCAACGTGAGTCATTTGCAA+TGG 0.548537 1:+90755167 MsG0180005353.01.T01:CDS
TGCGCTTGTTATGCGCTCAA+AGG 0.549531 1:+90758308 MsG0180005353.01.T01:CDS
GGCGTTTCGCCATTTCCCGT+GGG 0.558137 1:+90758241 MsG0180005353.01.T01:CDS
GCGAAACGCCGCGAAGGCAA+TGG 0.561703 1:-90758228 None:intergenic
GCTTGTCCAACGCTAACAGT+AGG 0.567496 1:-90758368 None:intergenic
GCCGGCACCGACGCTGCCGT+CGG 0.571291 1:-90755087 None:intergenic
CTAATATATGCAGCAACAGC+AGG 0.571804 1:+90758074 MsG0180005353.01.T01:CDS
AGAGACTTGTGCTACAATGT+AGG 0.572806 1:-90758276 None:intergenic
AAATGCCAGAATCGGAGTCA+GGG 0.577507 1:+90755061 None:intergenic
ACTTGTGCTACAATGTAGGC+TGG 0.578393 1:-90758272 None:intergenic
CCGGCGACACCGGATACTCC+CGG 0.580871 1:+90755105 MsG0180005353.01.T01:CDS
CTTGTCCAACGCTAACAGTA+GGG 0.582924 1:-90758367 None:intergenic
GCGAAGGCAATGGTGAGTGA+TGG 0.584999 1:-90758218 None:intergenic
GAGGTGCAACATGTGTATGC+CGG 0.585582 1:+90755191 MsG0180005353.01.T01:CDS
GCATCTCTGGATATATTTGG+TGG 0.589329 1:+90759151 MsG0180005353.01.T01:CDS
GAAATGGCGAAACGCCGCGA+AGG 0.592464 1:-90758234 None:intergenic
ATGCAGGTTGGTGAATTGGC+TGG 0.597369 1:+90758662 MsG0180005353.01.T01:intron
ATGAATTGAACGTACCGCAC+GGG 0.604011 1:-90758456 None:intergenic
AAGCTCCTAACCGGTTGATG+TGG 0.614148 1:-90759245 None:intergenic
GCTGGACCTAAGGTGCGCAC+CGG 0.614709 1:-90759107 None:intergenic
TAGGCTGGAACATGTGCCCA+CGG 0.616186 1:-90758257 None:intergenic
ACTGTCCCTACTGTTAGCGT+TGG 0.619097 1:+90758362 MsG0180005353.01.T01:CDS
GTCGCAGCCAGCTCTAGCGA+CGG 0.626232 1:-90759268 None:intergenic
ATAGTGAACAACAAATACAA+TGG 0.626790 1:+90758101 MsG0180005353.01.T01:CDS
CCAGCTAGAGCACCAAGCGT+CGG 0.629619 1:-90759176 None:intergenic
AGGCTGGAACATGTGCCCAC+GGG 0.634760 1:-90758256 None:intergenic
CACCACCAGAGAGGAAAGGA+TGG 0.636860 1:-90758337 None:intergenic
AGGGACACCGACGGCAGCGT+CGG 0.638264 1:+90755080 MsG0180005353.01.T01:CDS
GTGAGTCATTTGCAATGGGG+AGG 0.644380 1:+90755172 MsG0180005353.01.T01:CDS
GTGACACCACCAGAGAGGAA+AGG 0.645575 1:-90758341 None:intergenic
AATGCTAGGCCAACAAGCGG+TGG 0.661522 1:+90759074 MsG0180005353.01.T01:intron
ATCGGAGTCAGGGACACCGA+CGG 0.669278 1:+90755071 MsG0180005353.01.T01:CDS
GTAAATGCTAGGCCAACAAG+CGG 0.699062 1:+90759071 MsG0180005353.01.T01:intron
CGACACCGGATACTCCCGGA+GGG 0.703914 1:+90755109 MsG0180005353.01.T01:CDS
GTGCAACATGTGTATGCCGG+TGG 0.710525 1:+90755194 MsG0180005353.01.T01:CDS
AACGTGAGTCATTTGCAATG+GGG 0.719998 1:+90755169 MsG0180005353.01.T01:CDS
GGACAGTGACACCACCAGAG+AGG 0.725765 1:-90758346 None:intergenic
GCGACACCGGATACTCCCGG+AGG 0.726349 1:+90755108 MsG0180005353.01.T01:CDS
TGTTGCTACTGATTCCCGTG+CGG 0.778451 1:+90758442 MsG0180005353.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTAATTTAATTAACAATT+GGG + Chr1:90755571-90755590 MsG0180005353.01.T01:intron 10.0%
!! TAAAATAAAAAAGATTAATG+CGG + Chr1:90756601-90756620 MsG0180005353.01.T01:intron 10.0%
!! TAGTTAATTTAATTAACAAT+TGG + Chr1:90755570-90755589 MsG0180005353.01.T01:intron 10.0%
!! TTATATTGAAATGAAATATA+TGG + Chr1:90756164-90756183 MsG0180005353.01.T01:intron 10.0%
!!! TAATAAAAAAATTGTTTTCA+AGG - Chr1:90755943-90755962 None:intergenic 10.0%
!!! TACTTTTCTTTTTTAAAATA+CGG - Chr1:90756882-90756901 None:intergenic 10.0%
!! AAAACTATTCAATATACTTT+CGG - Chr1:90756500-90756519 None:intergenic 15.0%
!! ATTCAGACAAAATTTATATT+CGG - Chr1:90758908-90758927 None:intergenic 15.0%
!!! AAATAGATAGCATTTTTTTT+AGG + Chr1:90755479-90755498 MsG0180005353.01.T01:intron 15.0%
!!! AATAGATAGCATTTTTTTTA+GGG + Chr1:90755480-90755499 MsG0180005353.01.T01:intron 15.0%
!!! CATTTCAATATATAATTTGT+CGG + Chr1:90756215-90756234 MsG0180005353.01.T01:intron 15.0%
!!! GAATGTATATTTTTTTTTGA+AGG - Chr1:90755858-90755877 None:intergenic 15.0%
!!! TAAAAAAGTTGATTAAATGA+GGG + Chr1:90756992-90757011 MsG0180005353.01.T01:intron 15.0%
!!! TGAAATTACATAGATTTTTT+TGG + Chr1:90757458-90757477 MsG0180005353.01.T01:intron 15.0%
!!! TTAAAAAAGTTGATTAAATG+AGG + Chr1:90756991-90757010 MsG0180005353.01.T01:intron 15.0%
!!! TTATAAGTTGTTTGTTTTTT+TGG - Chr1:90757605-90757624 None:intergenic 15.0%
!! AAACTCAAAGTTTAAGTATT+CGG - Chr1:90757043-90757062 None:intergenic 20.0%
!! ACAAAATTAAATCAACTACA+TGG - Chr1:90757688-90757707 None:intergenic 20.0%
!! ATGTTCATTATTCTATCAAT+TGG + Chr1:90758170-90758189 MsG0180005353.01.T01:CDS 20.0%
!! ATTACAAATACAAAAACAAG+TGG - Chr1:90755602-90755621 None:intergenic 20.0%
!! ATTCTTATAGATGAGAATAA+TGG - Chr1:90755135-90755154 None:intergenic 20.0%
!! ATTGTTTAAACAACTAAAAG+TGG - Chr1:90757353-90757372 None:intergenic 20.0%
!! TACATATACTATATTACACA+CGG - Chr1:90755975-90755994 None:intergenic 20.0%
!! TTTCATTGATAAACAAAAGA+CGG + Chr1:90756282-90756301 MsG0180005353.01.T01:intron 20.0%
!!! AAAAAAGTTGATTAAATGAG+GGG + Chr1:90756993-90757012 MsG0180005353.01.T01:intron 20.0%
!!! AAATTTCAAGTTCTCTAAAT+TGG + Chr1:90758554-90758573 MsG0180005353.01.T01:intron 20.0%
!!! AACATGTTTGATATTTTCTT+AGG - Chr1:90756951-90756970 None:intergenic 20.0%
!!! AATTTCAAGTTCTCTAAATT+GGG + Chr1:90758555-90758574 MsG0180005353.01.T01:intron 20.0%
!!! ACATGTTTGATATTTTCTTA+GGG - Chr1:90756950-90756969 None:intergenic 20.0%
!!! AGGAAATAAATTTTATTTGC+TGG - Chr1:90755880-90755899 None:intergenic 20.0%
!!! ATTCAATGATAATGTTTCAA+AGG + Chr1:90758819-90758838 MsG0180005353.01.T01:intron 20.0%
!!! ATTTTTGTTTGCTTCTTTTT+AGG - Chr1:90755900-90755919 None:intergenic 20.0%
!!! TATTGAGTTTTTATGAGTTA+AGG + Chr1:90758604-90758623 MsG0180005353.01.T01:intron 20.0%
!!! TCTATTTGATATTTTAGTCA+AGG - Chr1:90755466-90755485 None:intergenic 20.0%
!!! TGATGTTATTGATTTGTATT+TGG + Chr1:90758753-90758772 MsG0180005353.01.T01:intron 20.0%
!!! TGATTTAATTTTGTAGCTTT+GGG + Chr1:90757694-90757713 MsG0180005353.01.T01:intron 20.0%
!!! TTACTTTTCCTTTTCATTAA+GGG - Chr1:90757986-90758005 None:intergenic 20.0%
!!! TTGATTTAATTTTGTAGCTT+TGG + Chr1:90757693-90757712 MsG0180005353.01.T01:intron 20.0%
!!! TTGTATTTGGTTTTCATAAT+AGG + Chr1:90758766-90758785 MsG0180005353.01.T01:intron 20.0%
!!! TTTACTTTTCCTTTTCATTA+AGG - Chr1:90757987-90758006 None:intergenic 20.0%
!!! TTTTTCCAAAAATCTACATT+TGG + Chr1:90757859-90757878 MsG0180005353.01.T01:intron 20.0%
! AATCATGAAAACTATTCCTA+AGG + Chr1:90758846-90758865 MsG0180005353.01.T01:intron 25.0%
! ATAGTGAACAACAAATACAA+TGG + Chr1:90758101-90758120 MsG0180005353.01.T01:CDS 25.0%
! TAACATCAATTCATGAGAAA+AGG - Chr1:90758741-90758760 None:intergenic 25.0%
! TATACTACGAGTTAAGTAAA+TGG - Chr1:90756628-90756647 None:intergenic 25.0%
! TCTATGTCAAAATACATTGA+AGG - Chr1:90756241-90756260 None:intergenic 25.0%
! TGTCAAATGTTATATTCAGT+TGG + Chr1:90758795-90758814 MsG0180005353.01.T01:intron 25.0%
!! AAACAGTCTCAAAGTATTTA+TGG - Chr1:90757550-90757569 None:intergenic 25.0%
!! AACCAAATGGAATTAATTTG+TGG - Chr1:90755371-90755390 None:intergenic 25.0%
!! AATTTTGTCTGAATAATGAC+AGG + Chr1:90758914-90758933 MsG0180005353.01.T01:intron 25.0%
!! ATATATTTTACTAAGGTGTG+TGG + Chr1:90756698-90756717 MsG0180005353.01.T01:intron 25.0%
!! ATCTCTCTCTTTATGATTTT+TGG + Chr1:90755292-90755311 MsG0180005353.01.T01:intron 25.0%
!! ATGTTCCAAATGTAGATTTT+TGG - Chr1:90757867-90757886 None:intergenic 25.0%
!! TACTTTTCCTTTTCATTAAG+GGG - Chr1:90757985-90758004 None:intergenic 25.0%
!!! ACCAAATGGAATTAATTTGT+GGG - Chr1:90755370-90755389 None:intergenic 25.0%
!!! AGGAGGTATATATTTTACTA+AGG + Chr1:90756691-90756710 MsG0180005353.01.T01:intron 25.0%
!!! CAATGTATTTTGACATAGAT+GGG + Chr1:90756242-90756261 MsG0180005353.01.T01:intron 25.0%
!!! GATTTAATTTTGTAGCTTTG+GGG + Chr1:90757695-90757714 MsG0180005353.01.T01:intron 25.0%
!!! GGTTGGATTTATTTTTTTGA+GGG + Chr1:90757130-90757149 MsG0180005353.01.T01:intron 25.0%
!!! GTTAAGGTTGTTTTAATTCA+TGG + Chr1:90758620-90758639 MsG0180005353.01.T01:intron 25.0%
!!! GTTGCGACTTTTTTTTTTAA+GGG + Chr1:90757160-90757179 MsG0180005353.01.T01:intron 25.0%
!!! TCAATGTATTTTGACATAGA+TGG + Chr1:90756241-90756260 MsG0180005353.01.T01:intron 25.0%
!!! TTATTTTGTATATGCAATGC+AGG + Chr1:90758646-90758665 MsG0180005353.01.T01:intron 25.0%
!!! TTATTTTTTTGAGGGAACTT+GGG + Chr1:90757138-90757157 MsG0180005353.01.T01:intron 25.0%
!!! TTGTATTTGTTGTTCACTAT+TGG - Chr1:90758101-90758120 None:intergenic 25.0%
!!! TTTATTTTTTTGAGGGAACT+TGG + Chr1:90757137-90757156 MsG0180005353.01.T01:intron 25.0%
!!! TTTTTGGAAAAATCCACATT+TGG - Chr1:90757851-90757870 None:intergenic 25.0%
!!! TTTTTTAAGGGAATGAACTT+GGG + Chr1:90757172-90757191 MsG0180005353.01.T01:intron 25.0%
!!! TTTTTTTAAGGGAATGAACT+TGG + Chr1:90757171-90757190 MsG0180005353.01.T01:intron 25.0%
!!! TTTTTTTTGAAGGAATTTGC+TGG - Chr1:90755848-90755867 None:intergenic 25.0%
AACAAATGCAACTAGTAACA+TGG - Chr1:90756436-90756455 None:intergenic 30.0%
AATGGAGTAGAAACTCTTAT+GGG + Chr1:90758119-90758138 MsG0180005353.01.T01:CDS 30.0%
ACAAATGCAACTAGTAACAT+GGG - Chr1:90756435-90756454 None:intergenic 30.0%
ACTAGTAACATGGGTTTATT+AGG - Chr1:90756426-90756445 None:intergenic 30.0%
ATATGACAGCCAAAATTTCA+GGG + Chr1:90756645-90756664 MsG0180005353.01.T01:intron 30.0%
CTAGTAACATGGGTTTATTA+GGG - Chr1:90756425-90756444 None:intergenic 30.0%
GTCAGATTTAACTGTTTCAT+GGG + Chr1:90755404-90755423 MsG0180005353.01.T01:intron 30.0%
GTCATGTCATTAAAAACCTT+AGG - Chr1:90758865-90758884 None:intergenic 30.0%
TAAATAGTATTGTTTGCACG+TGG + Chr1:90755687-90755706 MsG0180005353.01.T01:intron 30.0%
TAAGATTGTGAGTAATGTTG+TGG + Chr1:90759046-90759065 MsG0180005353.01.T01:intron 30.0%
TAGGTTAACAAGTGTCATAA+GGG + Chr1:90757267-90757286 MsG0180005353.01.T01:intron 30.0%
TATATGACAGCCAAAATTTC+AGG + Chr1:90756644-90756663 MsG0180005353.01.T01:intron 30.0%
TGTTAAAATGTGTCACAGAT+TGG + Chr1:90758026-90758045 MsG0180005353.01.T01:intron 30.0%
TTAGAGAACTTGAAATTTCG+CGG - Chr1:90758552-90758571 None:intergenic 30.0%
TTAGGTTAACAAGTGTCATA+AGG + Chr1:90757266-90757285 MsG0180005353.01.T01:intron 30.0%
TTCAAAAGTTCTCCAAACAA+AGG + Chr1:90757658-90757677 MsG0180005353.01.T01:intron 30.0%
! ACTTTTCCTTTTCATTAAGG+GGG - Chr1:90757984-90758003 None:intergenic 30.0%
! ATATTTTCTTAGGGTGTGTT+TGG - Chr1:90756941-90756960 None:intergenic 30.0%
! ATGTTTTCTCAATATCAAGG+AGG + Chr1:90756674-90756693 MsG0180005353.01.T01:intron 30.0%
! GACATGTTTTCTCAATATCA+AGG + Chr1:90756671-90756690 MsG0180005353.01.T01:intron 30.0%
!! AAATGGAATTAATTTGTGGG+CGG - Chr1:90755367-90755386 None:intergenic 30.0%
!! GATAAACAAAAGACGGATTA+CGG + Chr1:90756289-90756308 MsG0180005353.01.T01:intron 30.0%
!!! GGGTTGGATTTATTTTTTTG+AGG + Chr1:90757129-90757148 MsG0180005353.01.T01:intron 30.0%
!!! GGTTGCGACTTTTTTTTTTA+AGG + Chr1:90757159-90757178 MsG0180005353.01.T01:intron 30.0%
!!! TTTTGACATAGATGGGTTAT+TGG + Chr1:90756249-90756268 MsG0180005353.01.T01:intron 30.0%
AACATTCTTATCTCAGGGTA+TGG + Chr1:90758713-90758732 MsG0180005353.01.T01:intron 35.0%
AGCATTGCTTGAGTTATTAG+TGG + Chr1:90757772-90757791 MsG0180005353.01.T01:intron 35.0%
AGTTTAGGAGGGAAAATGAA+GGG - Chr1:90756912-90756931 None:intergenic 35.0%
ATATTCGGAGACTAACTTGA+TGG - Chr1:90758893-90758912 None:intergenic 35.0%
ATCGTGTCAATCTGAAAACT+TGG + Chr1:90757108-90757127 MsG0180005353.01.T01:intron 35.0%
ATGTGATGAGATGCATGATT+GGG + Chr1:90755645-90755664 MsG0180005353.01.T01:intron 35.0%
ATGTTGTGGTTGTAAATGCT+AGG + Chr1:90759060-90759079 MsG0180005353.01.T01:intron 35.0%
CAAGCATCTCTGGATATATT+TGG + Chr1:90759148-90759167 MsG0180005353.01.T01:CDS 35.0%
CAATGGAGTAGAAACTCTTA+TGG + Chr1:90758118-90758137 MsG0180005353.01.T01:CDS 35.0%
CACATAGAATGTTCCAAATG+TGG + Chr1:90757835-90757854 MsG0180005353.01.T01:intron 35.0%
CTACATGGTTAACCTTTGTT+TGG - Chr1:90757673-90757692 None:intergenic 35.0%
CTATCAATTGGTCATATCTC+AGG + Chr1:90758182-90758201 MsG0180005353.01.T01:CDS 35.0%
CTTATCAAGCTTCGTGATAA+CGG + Chr1:90759215-90759234 MsG0180005353.01.T01:CDS 35.0%
GAAACAGTGCAAAAACATGT+AGG + Chr1:90756331-90756350 MsG0180005353.01.T01:intron 35.0%
GCCCACAAATTAATTCCATT+TGG + Chr1:90755366-90755385 MsG0180005353.01.T01:intron 35.0%
GGGGATTAGAATAATGTGAA+TGG - Chr1:90757965-90757984 None:intergenic 35.0%
GGTCAGATTTAACTGTTTCA+TGG + Chr1:90755403-90755422 MsG0180005353.01.T01:intron 35.0%
GTAGAATGATAGAGCTACTT+TGG - Chr1:90757901-90757920 None:intergenic 35.0%
GTTATCACGAAGCTTGATAA+GGG - Chr1:90759216-90759235 None:intergenic 35.0%
TCGTGTCAATCTGAAAACTT+GGG + Chr1:90757109-90757128 MsG0180005353.01.T01:intron 35.0%
TCTAATCCCCCTTAATGAAA+AGG + Chr1:90757975-90757994 MsG0180005353.01.T01:intron 35.0%
TGCTCAACATTCTTATCTCA+GGG + Chr1:90758708-90758727 MsG0180005353.01.T01:CDS 35.0%
TGTAGGATATTAAGCTACAC+TGG + Chr1:90756348-90756367 MsG0180005353.01.T01:intron 35.0%
TGTGTTTGGATTGAGAGTTT+AGG - Chr1:90756927-90756946 None:intergenic 35.0%
TTAACGTGAACGAGTTGTTA+AGG + Chr1:90756523-90756542 MsG0180005353.01.T01:intron 35.0%
TTGCTCAACATTCTTATCTC+AGG + Chr1:90758707-90758726 MsG0180005353.01.T01:CDS 35.0%
TTTGGATTGAGAGTTTAGGA+GGG - Chr1:90756923-90756942 None:intergenic 35.0%
TTTGTATATGCAATGCAGGT+TGG + Chr1:90758650-90758669 MsG0180005353.01.T01:intron 35.0%
! AAGTTGATTAAATGAGGGGT+AGG + Chr1:90756997-90757016 MsG0180005353.01.T01:intron 35.0%
! ATTTTACTAAGGTGTGTGGA+TGG + Chr1:90756702-90756721 MsG0180005353.01.T01:intron 35.0%
! GAATGATGATGTGTGTACAT+AGG + Chr1:90757721-90757740 MsG0180005353.01.T01:intron 35.0%
! TTAAGCTACACTGGTTATCT+TGG + Chr1:90756357-90756376 MsG0180005353.01.T01:intron 35.0%
!! AGAGCTACTTTGGAGTTTAT+TGG - Chr1:90757891-90757910 None:intergenic 35.0%
!! TGTCATAAGGGCATTGTTTA+AGG + Chr1:90757279-90757298 MsG0180005353.01.T01:intron 35.0%
!!! GATTTTTGGTCAACGAGTTT+TGG + Chr1:90755306-90755325 MsG0180005353.01.T01:intron 35.0%
AACGTGAGTCATTTGCAATG+GGG + Chr1:90755169-90755188 MsG0180005353.01.T01:CDS 40.0%
AAGTGTCTCTCTTTCTCAGA+AGG + Chr1:90755265-90755284 MsG0180005353.01.T01:intron 40.0%
AATGAATTGAACGTACCGCA+CGG - Chr1:90758460-90758479 None:intergenic 40.0%
AGAGACTTGTGCTACAATGT+AGG - Chr1:90758279-90758298 None:intergenic 40.0%
ATGGAGAGTTTAAGAGAGGA+TGG + Chr1:90756721-90756740 MsG0180005353.01.T01:intron 40.0%
CAACGTGAGTCATTTGCAAT+GGG + Chr1:90755168-90755187 MsG0180005353.01.T01:CDS 40.0%
CAGGAAATTACAAGCATCTC+TGG + Chr1:90759138-90759157 MsG0180005353.01.T01:CDS 40.0%
CATGCAAGCTAGAAACCAAA+TGG - Chr1:90755384-90755403 None:intergenic 40.0%
CGTTATCACGAAGCTTGATA+AGG - Chr1:90759217-90759236 None:intergenic 40.0%
CTAATATATGCAGCAACAGC+AGG + Chr1:90758074-90758093 MsG0180005353.01.T01:CDS 40.0%
CTTGTAATTTCCTGCTGCAA+CGG - Chr1:90759132-90759151 None:intergenic 40.0%
GAGTTTAGGAGGGAAAATGA+AGG - Chr1:90756913-90756932 None:intergenic 40.0%
GATGTGATGAGATGCATGAT+TGG + Chr1:90755644-90755663 MsG0180005353.01.T01:intron 40.0%
GCATCTCTGGATATATTTGG+TGG + Chr1:90759151-90759170 MsG0180005353.01.T01:CDS 40.0%
GTCAATCTGAAAACTTGGGT+TGG + Chr1:90757113-90757132 MsG0180005353.01.T01:intron 40.0%
GTCTGAATAATGACAGGATC+AGG + Chr1:90758920-90758939 MsG0180005353.01.T01:intron 40.0%
GTTTAGGAGGGAAAATGAAG+GGG - Chr1:90756911-90756930 None:intergenic 40.0%
GTTTGGATTGAGAGTTTAGG+AGG - Chr1:90756924-90756943 None:intergenic 40.0%
TCAACGTGAGTCATTTGCAA+TGG + Chr1:90755167-90755186 MsG0180005353.01.T01:CDS 40.0%
TGGAGAGTTTAAGAGAGGAT+GGG + Chr1:90756722-90756741 MsG0180005353.01.T01:intron 40.0%
! ATTTCGCGGCAACTTTTAAG+TGG - Chr1:90758538-90758557 None:intergenic 40.0%
! TTCTGAGAAAGAGAGACACT+TGG - Chr1:90755266-90755285 None:intergenic 40.0%
!! CATTTGGTTTCTAGCTTGCA+TGG + Chr1:90755382-90755401 MsG0180005353.01.T01:intron 40.0%
!! GCAACTATTGCTTTTACCAC+CGG - Chr1:90755213-90755232 None:intergenic 40.0%
ACAGATTGGAGCAGAGTTTG+TGG + Chr1:90758040-90758059 MsG0180005353.01.T01:intron 45.0%
ACTTGTGCTACAATGTAGGC+TGG - Chr1:90758275-90758294 None:intergenic 45.0%
AGAGTTTAAGAGAGGATGGG+AGG + Chr1:90756725-90756744 MsG0180005353.01.T01:intron 45.0%
AGATGAGAATAATGGCCCTC+CGG - Chr1:90755127-90755146 None:intergenic 45.0%
AGTTTAAGAGAGGATGGGAG+GGG + Chr1:90756727-90756746 MsG0180005353.01.T01:intron 45.0%
ATGAATTGAACGTACCGCAC+GGG - Chr1:90758459-90758478 None:intergenic 45.0%
CAGATTGGAGCAGAGTTTGT+GGG + Chr1:90758041-90758060 MsG0180005353.01.T01:intron 45.0%
CTTGTCCAACGCTAACAGTA+GGG - Chr1:90758370-90758389 None:intergenic 45.0%
GAATTGGCTGGTATTGCTGT+TGG + Chr1:90758674-90758693 MsG0180005353.01.T01:CDS 45.0%
GACAGCCAAAATTTCAGGGA+CGG + Chr1:90756649-90756668 MsG0180005353.01.T01:intron 45.0%
GAGTTTAAGAGAGGATGGGA+GGG + Chr1:90756726-90756745 MsG0180005353.01.T01:intron 45.0%
GTAAATGCTAGGCCAACAAG+CGG + Chr1:90759071-90759090 MsG0180005353.01.T01:intron 45.0%
GTGGATGGAGAGTTTAAGAG+AGG + Chr1:90756717-90756736 MsG0180005353.01.T01:intron 45.0%
GTTTACCATCCTTTCCTCTC+TGG + Chr1:90758332-90758351 MsG0180005353.01.T01:CDS 45.0%
TGCATCGCTAATTTCTCTGC+TGG + Chr1:90755230-90755249 MsG0180005353.01.T01:intron 45.0%
! CATGTCCGTCCCTGAAATTT+TGG - Chr1:90756657-90756676 None:intergenic 45.0%
!! TGCAATGCAGGTTGGTGAAT+TGG + Chr1:90758658-90758677 MsG0180005353.01.T01:intron 45.0%
!! TGGAATTAATTTGTGGGCGG+TGG - Chr1:90755364-90755383 None:intergenic 45.0%
!! AAAATTAAAAAAAAAAAGTT+AGG + Chr1:90757248-90757267 MsG0180005353.01.T01:intron 5.0%
!!! TTTATTTTACATTTATTTTT+AGG - Chr1:90757401-90757420 None:intergenic 5.0%
AAGCGGTGGTTCCATGAATC+CGG + Chr1:90759088-90759107 MsG0180005353.01.T01:CDS 50.0%
ACTGTCCCTACTGTTAGCGT+TGG + Chr1:90758362-90758381 MsG0180005353.01.T01:CDS 50.0%
ATCACTCACCATTGCCTTCG+CGG + Chr1:90758220-90758239 MsG0180005353.01.T01:CDS 50.0%
ATGGGAAATGCAGCTTGTGC+TGG + Chr1:90758137-90758156 MsG0180005353.01.T01:CDS 50.0%
CTGAACCACATCAACCGGTT+AGG + Chr1:90759240-90759259 MsG0180005353.01.T01:CDS 50.0%
GAGGTGCAACATGTGTATGC+CGG + Chr1:90755191-90755210 MsG0180005353.01.T01:CDS 50.0%
GATGAGAATAATGGCCCTCC+GGG - Chr1:90755126-90755145 None:intergenic 50.0%
GCTTGTCCAACGCTAACAGT+AGG - Chr1:90758371-90758390 None:intergenic 50.0%
GTGAGTCATTTGCAATGGGG+AGG + Chr1:90755172-90755191 MsG0180005353.01.T01:CDS 50.0%
TAATTTCCTGCTGCAACGGC+TGG - Chr1:90759128-90759147 None:intergenic 50.0%
TACCATCCTTTCCTCTCTGG+TGG + Chr1:90758335-90758354 MsG0180005353.01.T01:CDS 50.0%
TTCATGGAACCACCGCTTGT+TGG - Chr1:90759086-90759105 None:intergenic 50.0%
! AAGCTCCTAACCGGTTGATG+TGG - Chr1:90759248-90759267 None:intergenic 50.0%
!! ATGCAGGTTGGTGAATTGGC+TGG + Chr1:90758662-90758681 MsG0180005353.01.T01:intron 50.0%
!! TGCGCTTGTTATGCGCTCAA+AGG + Chr1:90758308-90758327 MsG0180005353.01.T01:CDS 50.0%
!! TGTTGCTACTGATTCCCGTG+CGG + Chr1:90758442-90758461 MsG0180005353.01.T01:CDS 50.0%
AATGCTAGGCCAACAAGCGG+TGG + Chr1:90759074-90759093 MsG0180005353.01.T01:intron 55.0%
ATGAATCCGGTGCGCACCTT+AGG + Chr1:90759101-90759120 MsG0180005353.01.T01:CDS 55.0%
CACCACCAGAGAGGAAAGGA+TGG - Chr1:90758340-90758359 None:intergenic 55.0%
CGGAGCTGAACCACATCAAC+CGG + Chr1:90759235-90759254 MsG0180005353.01.T01:CDS 55.0%
GAACATGTGCCCACGGGAAA+TGG - Chr1:90758253-90758272 None:intergenic 55.0%
GCGAAGGCAATGGTGAGTGA+TGG - Chr1:90758221-90758240 None:intergenic 55.0%
GTGACACCACCAGAGAGGAA+AGG - Chr1:90758344-90758363 None:intergenic 55.0%
GTGCAACATGTGTATGCCGG+TGG + Chr1:90755194-90755213 MsG0180005353.01.T01:CDS 55.0%
TAAGGTGCGCACCGGATTCA+TGG - Chr1:90759102-90759121 None:intergenic 55.0%
TAGCGACGGAAGCTCCTAAC+CGG - Chr1:90759257-90759276 None:intergenic 55.0%
TAGGCTGGAACATGTGCCCA+CGG - Chr1:90758260-90758279 None:intergenic 55.0%
!! CTTGGTGCTCTAGCTGGTTC+TGG + Chr1:90759182-90759201 MsG0180005353.01.T01:CDS 55.0%
!! TATTTGGTGGCACCGACGCT+TGG + Chr1:90759164-90759183 MsG0180005353.01.T01:CDS 55.0%
AGGCTGGAACATGTGCCCAC+GGG - Chr1:90758259-90758278 None:intergenic 60.0%
ATCGGAGTCAGGGACACCGA+CGG + Chr1:90755071-90755090 MsG0180005353.01.T01:CDS 60.0%
GAAATGGCGAAACGCCGCGA+AGG - Chr1:90758237-90758256 None:intergenic 60.0%
GGACAGTGACACCACCAGAG+AGG - Chr1:90758349-90758368 None:intergenic 60.0%
GGCGTTTCGCCATTTCCCGT+GGG + Chr1:90758241-90758260 MsG0180005353.01.T01:CDS 60.0%
GGTGTCCCTGACTCCGATTC+TGG - Chr1:90755069-90755088 None:intergenic 60.0%
TGCTGCAACGGCTGGACCTA+AGG - Chr1:90759120-90759139 None:intergenic 60.0%
TTAGGTCCAGCCGTTGCAGC+AGG + Chr1:90759119-90759138 MsG0180005353.01.T01:CDS 60.0%
! CCAGCTAGAGCACCAAGCGT+CGG - Chr1:90759179-90759198 None:intergenic 60.0%
!! AATGGCCCTCCGGGAGTATC+CGG - Chr1:90755117-90755136 None:intergenic 60.0%
CGACACCGGATACTCCCGGA+GGG + Chr1:90755109-90755128 MsG0180005353.01.T01:CDS 65.0%
CGGCGTTTCGCCATTTCCCG+TGG + Chr1:90758240-90758259 MsG0180005353.01.T01:CDS 65.0%
GCGAAACGCCGCGAAGGCAA+TGG - Chr1:90758231-90758250 None:intergenic 65.0%
GCTGGACCTAAGGTGCGCAC+CGG - Chr1:90759110-90759129 None:intergenic 65.0%
!! CCGACGCTTGGTGCTCTAGC+TGG + Chr1:90759176-90759195 MsG0180005353.01.T01:CDS 65.0%
AGGGACACCGACGGCAGCGT+CGG + Chr1:90755080-90755099 MsG0180005353.01.T01:CDS 70.0%
CCGGCGACACCGGATACTCC+CGG + Chr1:90755105-90755124 MsG0180005353.01.T01:CDS 70.0%
GCGACACCGGATACTCCCGG+AGG + Chr1:90755108-90755127 MsG0180005353.01.T01:CDS 70.0%
!! CCGGGAGTATCCGGTGTCGC+CGG - Chr1:90755108-90755127 None:intergenic 70.0%
!! ACCGACGGCAGCGTCGGTGC+CGG + Chr1:90755086-90755105 MsG0180005353.01.T01:CDS 75.0%
!! AGCGTCGGTGCCGGCGACAC+CGG + Chr1:90755095-90755114 MsG0180005353.01.T01:CDS 75.0%
!!! GCCGGCACCGACGCTGCCGT+CGG - Chr1:90755090-90755109 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 90755063 90759277 90755063 ID=MsG0180005353.01;Name=MsG0180005353.01
Chr1 mRNA 90755063 90759277 90755063 ID=MsG0180005353.01.T01;Parent=MsG0180005353.01;Name=MsG0180005353.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|4|0|276
Chr1 exon 90755063 90755215 90755063 ID=MsG0180005353.01.T01:exon:17525;Parent=MsG0180005353.01.T01
Chr1 exon 90758044 90758463 90758044 ID=MsG0180005353.01.T01:exon:17526;Parent=MsG0180005353.01.T01
Chr1 exon 90758668 90758729 90758668 ID=MsG0180005353.01.T01:exon:17527;Parent=MsG0180005353.01.T01
Chr1 exon 90759082 90759277 90759082 ID=MsG0180005353.01.T01:exon:17528;Parent=MsG0180005353.01.T01
Chr1 CDS 90755063 90755215 90755063 ID=MsG0180005353.01.T01:cds;Parent=MsG0180005353.01.T01
Chr1 CDS 90758044 90758463 90758044 ID=MsG0180005353.01.T01:cds;Parent=MsG0180005353.01.T01
Chr1 CDS 90758668 90758729 90758668 ID=MsG0180005353.01.T01:cds;Parent=MsG0180005353.01.T01
Chr1 CDS 90759082 90759277 90759082 ID=MsG0180005353.01.T01:cds;Parent=MsG0180005353.01.T01
Gene Sequence

>MsG0180005353.01.T01

ATGCCAGAATCGGAGTCAGGGACACCGACGGCAGCGTCGGTGCCGGCGACACCGGATACTCCCGGAGGGCCATTATTCTCATCTATAAGAATTGATTCACTTGATCAACGTGAGTCATTTGCAATGGGGAGGTGCAACATGTGTATGCCGGTGATTGGAGCAGAGTTTGTGGGAACATTCATACTAATATATGCAGCAACAGCAGGACCAATAGTGAACAACAAATACAATGGAGTAGAAACTCTTATGGGAAATGCAGCTTGTGCTGGACTAACAGTCATGTTCATTATTCTATCAATTGGTCATATCTCAGGTGCACATCTCAATCCATCACTCACCATTGCCTTCGCGGCGTTTCGCCATTTCCCGTGGGCACATGTTCCAGCCTACATTGTAGCACAAGTCTCTGCTTCGATTTGCGCTTGTTATGCGCTCAAAGGAGTTTACCATCCTTTCCTCTCTGGTGGTGTCACTGTCCCTACTGTTAGCGTTGGACAAGCTTTTGCAACTGAGTTTATCATCACTTTTATTCTCTTGTTTGTTGTTACTGCTGTTGCTACTGATTCCCGTGCGGTTGGTGAATTGGCTGGTATTGCTGTTGGTGCTACAGTTTTGCTCAACATTCTTATCTCAGGGCCAACAAGCGGTGGTTCCATGAATCCGGTGCGCACCTTAGGTCCAGCCGTTGCAGCAGGAAATTACAAGCATCTCTGGATATATTTGGTGGCACCGACGCTTGGTGCTCTAGCTGGTTCTGGAGTTTATACCCTTATCAAGCTTCGTGATAACGGAGCTGAACCACATCAACCGGTTAGGAGCTTCCGTCGCTAG

Protein sequence

>MsG0180005353.01.T01

MPESESGTPTAASVPATPDTPGGPLFSSIRIDSLDQRESFAMGRCNMCMPVIGAEFVGTFILIYAATAGPIVNNKYNGVETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWAHVPAYIVAQVSASICACYALKGVYHPFLSGGVTVPTVSVGQAFATEFIITFILLFVVTAVATDSRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHLWIYLVAPTLGALAGSGVYTLIKLRDNGAEPHQPVRSFRR*