AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023432.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023432.01.T03 MTR_8g092970 80.000 50 0 1 1 50 63 102 5.86e-17 71.2
MsG0480023432.01.T03 MTR_8g093010 66.071 56 10 2 1 56 65 111 2.82e-14 64.3
MsG0480023432.01.T03 MTR_8g092840 76.786 56 12 1 1 56 63 117 4.89e-14 63.5
MsG0480023432.01.T03 MTR_8g092930 87.097 31 4 0 1 31 63 93 2.70e-11 56.2
MsG0480023432.01.T02 MTR_8g092970 97.674 86 2 0 1 86 132 217 1.11e-58 179
MsG0480023432.01.T02 MTR_8g092990 94.186 86 5 0 1 86 142 227 2.33e-55 171
MsG0480023432.01.T02 MTR_8g092930 93.023 86 6 0 1 86 140 225 1.50e-54 168
MsG0480023432.01.T02 MTR_8g093010 86.047 86 11 1 1 86 135 219 8.80e-48 151
MsG0480023432.01.T02 MTR_8g092985 95.833 72 3 0 1 72 139 210 1.97e-46 147
MsG0480023432.01.T02 MTR_8g092960 82.353 85 15 0 1 85 131 215 2.86e-46 147
MsG0480023432.01.T02 MTR_8g092840 82.353 85 15 0 1 85 141 225 2.98e-46 147
MsG0480023432.01.T02 MTR_3g095560 73.626 91 19 1 1 86 137 227 1.90e-45 145
MsG0480023432.01.T02 MTR_3g094000 66.071 56 19 0 2 57 121 176 1.96e-22 85.5
MsG0480023432.01.T02 MTR_7g073200 75.556 45 11 0 2 46 109 153 4.83e-21 82.0
MsG0480023432.01.T02 MTR_3g116000 64.815 54 18 1 2 54 106 159 4.35e-20 79.7
MsG0480023432.01.T02 MTR_5g024730 50.000 72 30 2 1 66 106 177 1.75e-19 79.0
MsG0480023432.01.T02 MTR_8g073120 57.407 54 22 1 1 53 99 152 4.00e-18 75.1
MsG0480023432.01.T02 MTR_7g117540 59.574 47 19 0 2 48 103 149 2.35e-17 74.3
MsG0480023432.01.T02 MTR_8g023400 38.372 86 48 2 2 82 119 204 5.86e-17 73.6
MsG0480023432.01.T02 MTR_4g094725 67.442 43 14 0 1 43 107 149 6.49e-17 70.9
MsG0480023432.01.T02 MTR_2g096350 44.737 76 39 1 2 77 137 209 1.24e-16 71.2
MsG0480023432.01.T02 MTR_6g087150 64.286 42 15 0 2 43 121 162 1.75e-15 69.7
MsG0480023432.01.T02 MTR_5g034790 59.091 44 18 0 2 45 144 187 1.87e-15 69.7
MsG0480023432.01.T02 MTR_8g089880 60.976 41 16 0 2 42 155 195 2.20e-15 68.9
MsG0480023432.01.T02 MTR_4g129420 60.000 45 18 0 2 46 146 190 2.23e-15 69.7
MsG0480023432.01.T02 MTR_2g009310 60.976 41 16 0 2 42 163 203 3.01e-15 69.3
MsG0480023432.01.T02 MTR_5g030010 38.636 88 47 1 2 82 150 237 3.85e-15 68.9
MsG0480023432.01.T02 MTR_2g035800 61.905 42 16 0 2 43 104 145 5.23e-15 65.9
MsG0480023432.01.T02 MTR_4g120270 63.415 41 15 0 2 42 106 146 6.82e-15 67.4
MsG0480023432.01.T02 MTR_4g093830 39.506 81 39 1 2 82 154 224 1.50e-14 67.0
MsG0480023432.01.T02 MTR_1g043410 44.595 74 37 2 2 75 125 194 1.82e-14 66.6
MsG0480023432.01.T02 MTR_8g066780 44.615 65 36 0 2 66 144 208 2.24e-14 66.6
MsG0480023432.01.T02 MTR_5g026730 43.939 66 36 1 2 67 96 160 2.37e-14 64.7
MsG0480023432.01.T02 MTR_3g464780 58.696 46 19 0 1 46 133 178 2.66e-14 65.9
MsG0480023432.01.T02 MTR_8g063660 54.348 46 21 0 2 47 96 141 2.85e-14 66.2
MsG0480023432.01.T02 MTR_5g066250 38.750 80 37 1 2 81 162 229 2.94e-14 66.6
MsG0480023432.01.T02 MTR_3g110190 57.447 47 20 0 2 48 94 140 3.59e-14 65.9
MsG0480023432.01.T02 MTR_7g116220 39.474 76 36 2 2 67 101 176 3.91e-14 64.3
MsG0480023432.01.T02 MTR_5g064890 53.333 45 21 0 2 46 156 200 4.19e-14 65.9
MsG0480023432.01.T02 MTR_5g082940 59.091 44 18 0 2 45 105 148 5.83e-14 63.5
MsG0480023432.01.T02 MTR_8g032690 39.706 68 38 1 1 68 20 84 7.40e-14 61.6
MsG0480023432.01.T02 MTR_1g082550 53.333 45 21 0 2 46 129 173 7.41e-14 65.1
MsG0480023432.01.T02 MTR_4g063070 56.522 46 20 0 2 47 338 383 7.59e-14 65.1
MsG0480023432.01.T02 MTR_2g436100 58.537 41 17 0 2 42 121 161 8.23e-14 64.7
MsG0480023432.01.T02 MTR_3g071300 61.364 44 17 0 2 45 108 151 1.44e-13 62.4
MsG0480023432.01.T02 MTR_3g100400 60.976 41 16 0 2 42 158 198 1.56e-13 64.3
MsG0480023432.01.T02 MTR_3g099650 51.111 45 22 0 2 46 138 182 3.40e-13 63.5
MsG0480023432.01.T02 MTR_7g113800 53.333 45 21 0 2 46 122 166 3.84e-13 63.2
MsG0480023432.01.T02 MTR_1g074190 51.020 49 24 0 2 50 133 181 4.38e-13 63.2
MsG0480023432.01.T02 MTR_7g108855 42.188 64 29 1 1 56 95 158 4.44e-13 61.6
MsG0480023432.01.T02 MTR_5g026720 54.762 42 19 0 2 43 95 136 4.44e-13 60.8
MsG0480023432.01.T02 MTR_5g071930 47.692 65 32 1 1 65 90 152 4.53e-13 61.6
MsG0480023432.01.T02 MTR_5g064990 39.024 82 47 2 2 80 145 226 4.74e-13 63.2
MsG0480023432.01.T02 MTR_1g100737 48.000 50 26 0 1 50 124 173 4.79e-13 61.6
MsG0480023432.01.T02 MTR_7g116180 51.111 45 22 0 1 45 97 141 6.39e-13 60.8
MsG0480023432.01.T02 MTR_2g090905 58.537 41 17 0 2 42 73 113 9.22e-13 59.3
MsG0480023432.01.T02 MTR_6g007737 56.818 44 19 0 2 45 161 204 9.24e-13 62.0
MsG0480023432.01.T02 MTR_1g070425 51.111 45 22 0 1 45 98 142 1.09e-12 60.5
MsG0480023432.01.T02 MTR_8g074900 56.818 44 19 0 2 45 182 225 1.43e-12 60.8
MsG0480023432.01.T02 MTR_2g090950 58.537 41 17 0 2 42 125 165 1.56e-12 60.8
MsG0480023432.01.T02 MTR_6g055030 54.545 44 20 0 2 45 97 140 1.82e-12 60.8
MsG0480023432.01.T02 MTR_6g055030 54.545 44 20 0 2 45 128 171 1.88e-12 61.2
MsG0480023432.01.T02 MTR_1g492830 52.174 46 22 0 2 47 90 135 2.07e-12 60.5
MsG0480023432.01.T02 MTR_7g076250 40.964 83 39 3 1 82 91 164 2.26e-12 59.7
MsG0480023432.01.T02 MTR_2g044570 43.137 51 29 0 2 52 85 135 2.44e-12 60.8
MsG0480023432.01.T02 MTR_7g079290 45.098 51 28 0 2 52 157 207 2.45e-12 60.1
MsG0480023432.01.T02 MTR_8g071815 56.098 41 18 0 2 42 92 132 2.82e-12 59.3
MsG0480023432.01.T02 MTR_3g078450 45.000 60 31 1 2 61 106 163 3.13e-12 59.7
MsG0480023432.01.T02 MTR_5g092750 54.348 46 21 0 2 47 187 232 4.04e-12 59.7
MsG0480023432.01.T02 MTR_4g116460 54.762 42 17 2 2 42 486 526 4.29e-12 60.5
MsG0480023432.01.T02 MTR_2g055790 55.556 45 20 0 2 46 102 146 4.81e-12 58.9
MsG0480023432.01.T02 MTR_4g116460 54.762 42 17 2 2 42 443 483 4.89e-12 60.1
MsG0480023432.01.T02 MTR_1g070140 48.889 45 23 0 1 45 131 175 5.09e-12 60.1
MsG0480023432.01.T02 MTR_3g091620 35.484 93 44 3 2 82 129 217 5.96e-12 59.7
MsG0480023432.01.T02 MTR_5g064980 54.545 44 20 0 2 45 139 182 6.34e-12 59.7
MsG0480023432.01.T02 MTR_8g099495 57.143 42 18 0 2 43 349 390 7.12e-12 59.7
MsG0480023432.01.T02 MTR_3g086700 54.545 44 20 0 2 45 77 120 8.71e-12 58.2
MsG0480023432.01.T02 MTR_6g007680 54.762 42 19 0 2 43 68 109 9.30e-12 57.4
MsG0480023432.01.T02 MTR_7g059360 50.000 44 22 0 2 45 160 203 1.35e-11 58.2
MsG0480023432.01.T02 MTR_8g099515 57.143 42 18 0 2 43 339 380 1.38e-11 58.9
MsG0480023432.01.T02 MTR_8g009190 48.936 47 24 0 2 48 107 153 1.42e-11 58.5
MsG0480023432.01.T02 MTR_3g086730 54.545 44 20 0 2 45 77 120 1.54e-11 58.2
MsG0480023432.01.T02 MTR_3g078470 52.273 44 21 0 2 45 106 149 1.66e-11 57.8
MsG0480023432.01.T02 MTR_5g092790 56.098 41 18 0 2 42 187 227 1.68e-11 58.2
MsG0480023432.01.T02 MTR_5g022920 54.545 44 20 0 2 45 191 234 1.76e-11 57.8
MsG0480023432.01.T02 MTR_8g072020 61.905 42 14 2 2 42 447 487 2.49e-11 58.2
MsG0480023432.01.T02 MTR_8g072020 61.905 42 14 2 2 42 408 448 2.63e-11 58.2
MsG0480023432.01.T02 MTR_4g106680 53.659 41 19 0 2 42 134 174 2.86e-11 57.8
MsG0480023432.01.T02 MTR_4g022410 46.429 56 30 0 2 57 115 170 3.13e-11 56.6
MsG0480023432.01.T02 MTR_5g009210 57.143 42 18 0 2 43 317 358 4.02e-11 57.4
MsG0480023432.01.T02 MTR_4g056590 44.828 58 29 2 1 58 124 178 4.18e-11 56.2
MsG0480023432.01.T02 MTR_4g108830 54.762 42 19 0 2 43 176 217 4.20e-11 56.6
MsG0480023432.01.T02 MTR_4g108830 54.762 42 19 0 2 43 148 189 4.46e-11 56.2
MsG0480023432.01.T02 MTR_5g026260 59.524 42 15 2 2 42 507 547 5.71e-11 57.0
MsG0480023432.01.T02 MTR_4g106960 56.098 41 17 1 2 42 237 276 5.88e-11 57.0
MsG0480023432.01.T02 MTR_4g030070 44.000 50 28 0 2 51 112 161 5.91e-11 56.2
MsG0480023432.01.T02 MTR_6g007670 54.762 42 19 0 2 43 35 76 6.48e-11 56.6
MsG0480023432.01.T02 MTR_7g079280 51.064 47 23 0 2 48 110 156 6.55e-11 55.8
MsG0480023432.01.T02 MTR_1g056350 38.333 60 37 0 2 61 105 164 7.38e-11 55.5
MsG0480023432.01.T02 MTR_2g041200 56.098 41 18 0 2 42 111 151 7.59e-11 55.5
MsG0480023432.01.T01 MTR_8g092930 90.265 113 11 0 46 158 113 225 5.18e-71 213
MsG0480023432.01.T01 MTR_8g092970 93.333 105 7 0 54 158 113 217 3.10e-70 211
MsG0480023432.01.T01 MTR_8g092990 90.476 105 10 0 54 158 123 227 6.89e-67 203
MsG0480023432.01.T01 MTR_8g093010 78.125 128 27 1 31 158 93 219 1.32e-65 199
MsG0480023432.01.T01 MTR_8g092960 78.512 121 23 1 37 157 98 215 3.58e-63 193
MsG0480023432.01.T01 MTR_8g092840 78.632 117 25 0 41 157 109 225 3.89e-63 193
MsG0480023432.01.T01 MTR_8g092985 89.216 102 11 0 43 144 109 210 1.26e-62 192
MsG0480023432.01.T01 MTR_3g095560 74.380 121 26 1 42 157 106 226 2.17e-61 189
MsG0480023432.01.T01 MTR_3g094000 45.714 105 56 1 26 129 72 176 1.23e-27 101
MsG0480023432.01.T01 MTR_7g073200 50.000 94 44 2 26 118 62 153 2.26e-25 95.9
MsG0480023432.01.T01 MTR_3g116000 51.765 85 38 2 43 126 77 159 3.14e-24 93.2
MsG0480023432.01.T01 MTR_5g024730 44.340 106 52 3 40 138 72 177 7.54e-24 92.8
MsG0480023432.01.T01 MTR_8g073120 45.055 91 44 3 39 125 64 152 3.06e-22 88.6
MsG0480023432.01.T01 MTR_2g035800 45.556 90 48 1 26 115 57 145 4.09e-21 84.3
MsG0480023432.01.T01 MTR_7g108855 35.398 113 63 3 25 128 47 158 9.14e-20 82.0
MsG0480023432.01.T01 MTR_4g094725 54.930 71 31 1 46 115 79 149 9.56e-20 80.9
MsG0480023432.01.T01 MTR_7g117540 46.667 75 38 1 46 120 77 149 4.57e-19 81.6
MsG0480023432.01.T01 MTR_8g023400 35.897 117 68 3 43 154 90 204 4.90e-19 82.0
MsG0480023432.01.T01 MTR_2g096350 35.135 111 68 2 40 149 102 209 6.75e-19 80.1
MsG0480023432.01.T01 MTR_1g043410 34.848 132 72 5 19 147 74 194 1.75e-18 80.5
MsG0480023432.01.T01 MTR_4g120270 44.928 69 35 1 46 114 81 146 6.39e-18 78.6
MsG0480023432.01.T01 MTR_3g110190 42.697 89 43 2 39 120 53 140 1.32e-17 78.6
MsG0480023432.01.T01 MTR_5g082940 41.975 81 46 1 38 117 68 148 1.49e-17 75.5
MsG0480023432.01.T01 MTR_6g055030 45.455 77 40 1 43 117 95 171 1.64e-17 77.8
MsG0480023432.01.T01 MTR_4g129420 39.759 83 50 0 36 118 108 190 2.50e-17 78.2
MsG0480023432.01.T01 MTR_1g100737 41.176 85 46 1 42 122 89 173 3.97e-17 74.7
MsG0480023432.01.T01 MTR_5g064990 37.037 108 63 3 50 152 119 226 4.57e-17 77.0
MsG0480023432.01.T01 MTR_3g099650 42.667 75 41 1 46 118 108 182 5.22e-17 77.0
MsG0480023432.01.T01 MTR_1g492830 30.508 118 78 2 3 119 21 135 2.84e-16 73.2
MsG0480023432.01.T01 MTR_6g087150 50.000 70 34 1 46 115 94 162 3.75e-16 74.7
MsG0480023432.01.T01 MTR_7g116220 34.259 108 59 3 44 139 69 176 3.89e-16 72.0
MsG0480023432.01.T01 MTR_5g064980 37.383 107 55 2 46 150 109 205 4.33e-16 74.3
MsG0480023432.01.T01 MTR_3g464780 58.000 50 21 0 69 118 129 178 6.89e-16 72.8
MsG0480023432.01.T01 MTR_5g026730 34.862 109 66 3 35 139 53 160 7.14e-16 71.2
MsG0480023432.01.T01 MTR_1g082550 42.667 75 41 1 46 118 99 173 8.65e-16 73.6
MsG0480023432.01.T01 MTR_7g113800 43.421 76 39 2 46 118 92 166 1.24e-15 73.2
MsG0480023432.01.T01 MTR_6g007670 43.243 74 40 1 42 115 5 76 1.44e-15 71.6
MsG0480023432.01.T01 MTR_6g007670 47.297 74 37 2 43 115 143 215 5.31e-13 64.7
MsG0480023432.01.T01 MTR_7g076250 31.410 156 91 6 3 154 21 164 1.57e-15 70.5
MsG0480023432.01.T01 MTR_3g086700 39.506 81 47 1 39 117 40 120 1.74e-15 70.5
MsG0480023432.01.T01 MTR_2g436100 37.079 89 55 1 26 114 74 161 1.76e-15 72.0
MsG0480023432.01.T01 MTR_5g030010 38.462 91 49 1 71 154 147 237 1.86e-15 72.8
MsG0480023432.01.T01 MTR_2g041200 39.796 98 42 2 17 114 71 151 1.91e-15 70.1
MsG0480023432.01.T01 MTR_8g099495 34.545 110 69 2 9 115 281 390 2.69e-15 72.4
MsG0480023432.01.T01 MTR_6g007680 43.243 74 41 1 42 115 37 109 2.74e-15 69.3
MsG0480023432.01.T01 MTR_4g093830 39.286 84 41 1 71 154 151 224 3.60e-15 71.6
MsG0480023432.01.T01 MTR_3g071300 44.156 77 40 1 44 117 75 151 3.67e-15 69.3
MsG0480023432.01.T01 MTR_2g090950 40.000 95 52 2 25 114 71 165 3.74e-15 70.5
MsG0480023432.01.T01 MTR_8g089880 35.714 98 59 2 27 124 112 205 3.82e-15 70.9
MsG0480023432.01.T01 MTR_3g086730 37.079 89 54 1 39 125 40 128 4.63e-15 70.1
MsG0480023432.01.T01 MTR_5g064890 54.167 48 22 0 71 118 153 200 4.91e-15 71.2
MsG0480023432.01.T01 MTR_5g071930 47.826 69 34 1 69 137 86 152 5.60e-15 69.3
MsG0480023432.01.T01 MTR_2g009310 61.364 44 17 0 71 114 160 203 5.94e-15 71.2
MsG0480023432.01.T01 MTR_4g063070 58.696 46 19 0 69 114 333 378 6.60e-15 71.2
MsG0480023432.01.T01 MTR_8g066780 44.776 67 37 0 71 137 141 207 7.63e-15 70.9
MsG0480023432.01.T01 MTR_5g066250 34.259 108 58 2 46 153 135 229 9.84e-15 70.9
MsG0480023432.01.T01 MTR_2g090905 34.343 99 60 1 21 114 15 113 9.85e-15 67.0
MsG0480023432.01.T01 MTR_4g056590 37.500 88 48 3 43 130 98 178 1.03e-14 68.6
MsG0480023432.01.T01 MTR_5g034790 40.476 84 45 2 36 117 107 187 1.10e-14 70.5
MsG0480023432.01.T01 MTR_3g100400 43.478 69 38 1 46 114 131 198 1.15e-14 70.5
MsG0480023432.01.T01 MTR_3g078450 38.202 89 52 2 46 133 77 163 1.32e-14 68.6
MsG0480023432.01.T01 MTR_8g074900 39.535 86 46 2 33 117 145 225 1.78e-14 68.6
MsG0480023432.01.T01 MTR_2g055790 36.782 87 51 1 32 118 64 146 2.04e-14 67.8
MsG0480023432.01.T01 MTR_4g030070 33.708 89 57 1 35 123 75 161 2.09e-14 68.2
MsG0480023432.01.T01 MTR_7g116180 53.191 47 22 0 71 117 95 141 3.82e-14 66.6
MsG0480023432.01.T01 MTR_1g074190 51.923 52 25 0 71 122 130 181 3.90e-14 68.9
MsG0480023432.01.T01 MTR_8g063660 36.905 84 52 1 36 119 59 141 4.62e-14 68.6
MsG0480023432.01.T01 MTR_3g078470 30.702 114 78 1 5 117 36 149 4.80e-14 67.0
MsG0480023432.01.T01 MTR_8g032690 40.580 69 38 1 72 140 19 84 5.52e-14 64.7
MsG0480023432.01.T01 MTR_1g070425 53.191 47 22 0 71 117 96 142 5.55e-14 66.2
MsG0480023432.01.T01 MTR_5g022920 36.905 84 52 1 35 117 151 234 6.24e-14 67.0
MsG0480023432.01.T01 MTR_5g076990 36.290 124 68 4 1 117 32 151 6.32e-14 67.8
MsG0480023432.01.T01 MTR_5g026720 54.545 44 20 0 72 115 93 136 1.63e-13 64.7
MsG0480023432.01.T01 MTR_6g007737 36.585 82 51 1 36 117 124 204 1.69e-13 67.0
MsG0480023432.01.T01 MTR_3g078120 29.091 110 72 3 9 114 20 127 1.86e-13 64.3
MsG0480023432.01.T01 MTR_3g091620 28.676 136 80 4 31 154 87 217 1.89e-13 67.0
MsG0480023432.01.T01 MTR_8g072020 41.304 92 50 3 24 114 399 487 3.45e-13 66.2
MsG0480023432.01.T01 MTR_5g009210 43.939 66 36 1 51 115 293 358 4.16e-13 65.9
MsG0480023432.01.T01 MTR_5g009190 43.939 66 36 1 51 115 272 337 4.24e-13 65.9
MsG0480023432.01.T01 MTR_7g079290 44.643 56 31 0 69 124 152 207 4.31e-13 64.7
MsG0480023432.01.T01 MTR_8g071815 53.333 45 21 0 70 114 88 132 4.44e-13 63.9
MsG0480023432.01.T01 MTR_8g099515 33.613 119 68 3 5 115 265 380 4.61e-13 65.9
MsG0480023432.01.T01 MTR_8g028465 38.667 75 43 1 46 120 91 162 4.64e-13 64.3
MsG0480023432.01.T01 MTR_1g056350 34.286 105 64 3 32 133 62 164 5.32e-13 63.5
MsG0480023432.01.T01 MTR_3g091200 29.310 116 78 3 1 114 260 373 6.39e-13 65.5
MsG0480023432.01.T01 MTR_5g009200 43.939 66 36 1 51 115 328 393 8.66e-13 65.1
MsG0480023432.01.T01 MTR_3g087900 42.500 80 41 3 40 118 40 115 8.95e-13 62.8
MsG0480023432.01.T01 MTR_7g059360 44.068 59 33 0 59 117 145 203 1.15e-12 63.5
MsG0480023432.01.T01 MTR_3g012550 24.516 155 96 4 3 147 30 173 1.18e-12 62.8
MsG0480023432.01.T01 MTR_4g116460 53.333 45 19 2 71 114 440 483 1.35e-12 64.7
MsG0480023432.01.T01 MTR_4g116460 53.333 45 19 2 71 114 483 526 1.38e-12 64.7
MsG0480023432.01.T01 MTR_3g114500 36.000 75 44 2 41 115 44 114 1.68e-12 61.2
MsG0480023432.01.T01 MTR_7g079280 29.524 105 70 2 29 132 67 168 2.19e-12 62.0
MsG0480023432.01.T01 MTR_5g092790 39.241 79 45 2 38 114 150 227 2.28e-12 62.8
MsG0480023432.01.T01 MTR_1g070140 50.000 46 23 0 72 117 130 175 2.33e-12 63.5
MsG0480023432.01.T01 MTR_5g092750 54.167 48 22 0 72 119 185 232 3.49e-12 62.4
MsG0480023432.01.T01 MTR_4g106680 35.443 79 50 1 36 114 97 174 3.80e-12 62.8
MsG0480023432.01.T01 MTR_4g108830 53.191 47 22 0 69 115 143 189 4.41e-12 61.6
MsG0480023432.01.T01 MTR_4g108830 53.191 47 22 0 69 115 171 217 4.46e-12 62.0
MsG0480023432.01.T01 MTR_4g022410 30.275 109 68 1 21 129 70 170 4.57e-12 61.2
MsG0480023432.01.T01 MTR_1g026070 27.723 101 63 2 15 115 24 114 6.77e-12 59.7
MsG0480023432.01.T01 MTR_8g072020 44.156 77 41 2 39 114 373 448 7.26e-12 62.4
MsG0480023432.01.T01 MTR_1g090480 28.226 124 80 2 1 121 34 151 8.18e-12 60.5
MsG0480023432.01.T01 MTR_6g055030 54.545 44 20 0 74 117 97 140 9.38e-12 61.6
MsG0480023432.01.T01 MTR_8g009190 35.366 82 51 1 41 120 72 153 9.64e-12 62.0
MsG0480023432.01.T01 MTR_2g044570 42.593 54 31 0 71 124 82 135 2.52e-11 60.5
MsG0480023432.01.T01 MTR_7g116200 36.486 74 45 1 42 115 65 136 2.65e-11 58.9
MsG0480023432.01.T01 MTR_3g078540 41.270 63 36 1 59 120 66 128 3.60e-11 58.2
MsG0480023432.01.T01 MTR_3g081030 36.364 88 52 2 38 123 85 170 3.66e-11 59.3
MsG0480023432.01.T01 MTR_3g078520 28.261 92 66 0 24 115 55 146 4.32e-11 58.5
MsG0480023432.01.T01 MTR_8g027980 33.333 75 48 1 48 120 93 167 5.18e-11 59.3
MsG0480023432.01.T01 MTR_8g066740 41.333 75 41 1 46 117 77 151 5.43e-11 59.7
MsG0480023432.01.T01 MTR_7g117350 30.841 107 63 3 16 115 255 357 6.25e-11 59.7
MsG0480023432.01.T01 MTR_7g117350 30.841 107 63 3 16 115 263 365 6.27e-11 59.7
MsG0480023432.01.T01 MTR_8g019710 53.333 45 21 0 71 115 53 97 8.74e-11 57.0
MsG0480023432.01.T01 MTR_7g116210 47.727 44 23 0 72 115 35 78 9.38e-11 56.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023432.01.T02 AT1G49210 57.955 88 34 1 1 85 136 223 3.31e-31 109
MsG0480023432.01.T02 AT1G49220 60.976 82 29 2 1 79 136 217 7.37e-30 106
MsG0480023432.01.T02 AT1G49200 57.955 88 34 2 1 85 137 224 1.48e-29 105
MsG0480023432.01.T02 AT3G18773 53.409 88 38 2 1 85 131 218 1.80e-28 102
MsG0480023432.01.T02 AT1G49230 52.874 87 37 1 2 84 133 219 7.38e-26 95.5
MsG0480023432.01.T02 AT5G05280 62.500 56 21 0 1 56 114 169 1.30e-21 83.6
MsG0480023432.01.T02 AT3G10910 71.739 46 13 0 1 46 115 160 1.55e-20 80.9
MsG0480023432.01.T02 AT1G76410 51.899 79 37 1 2 79 106 184 9.36e-19 76.3
MsG0480023432.01.T02 AT1G20823 66.667 45 15 0 2 46 113 157 9.98e-19 76.6
MsG0480023432.01.T02 AT5G01880 56.364 55 22 1 2 56 107 159 5.71e-18 73.6
MsG0480023432.01.T02 AT1G72310 64.444 45 16 0 2 46 129 173 1.15e-17 75.5
MsG0480023432.01.T02 AT3G03550 70.732 41 12 0 2 42 161 201 2.10e-17 75.1
MsG0480023432.01.T02 AT5G17600 68.293 41 13 0 2 42 144 184 2.23e-17 75.1
MsG0480023432.01.T02 AT4G17905 70.732 41 12 0 2 42 183 223 4.13e-17 74.3
MsG0480023432.01.T02 AT4G17905 70.732 41 12 0 2 42 157 197 4.30e-17 73.9
MsG0480023432.01.T02 AT3G05200 38.095 105 38 3 2 81 130 232 1.17e-16 73.2
MsG0480023432.01.T02 AT1G53820 60.976 41 16 0 2 42 122 162 1.68e-16 72.4
MsG0480023432.01.T02 AT4G35480 60.870 46 18 0 1 46 114 159 4.22e-16 69.7
MsG0480023432.01.T02 AT5G47610 48.276 58 30 0 1 58 108 165 1.47e-15 67.8
MsG0480023432.01.T02 AT2G17450 61.364 44 17 0 2 45 104 147 1.76e-15 67.8
MsG0480023432.01.T02 AT4G28890 58.537 41 17 0 2 42 125 165 4.14e-15 68.9
MsG0480023432.01.T02 AT2G20030 58.537 41 17 0 2 42 126 166 7.66e-15 68.2
MsG0480023432.01.T02 AT1G72220 48.387 62 28 1 2 59 179 240 1.08e-14 67.8
MsG0480023432.01.T02 AT4G30400 60.976 41 16 0 2 42 136 176 1.43e-14 67.4
MsG0480023432.01.T02 AT1G72200 43.056 72 24 2 2 72 146 201 1.95e-14 67.0
MsG0480023432.01.T02 AT3G48030 54.545 44 20 0 2 45 209 252 3.36e-14 66.2
MsG0480023432.01.T02 AT4G33565 44.776 67 35 1 2 66 219 285 3.38e-14 66.2
MsG0480023432.01.T02 AT5G40250 53.333 45 21 0 2 46 145 189 3.65e-14 66.2
MsG0480023432.01.T02 AT2G18650 62.222 45 17 0 2 46 128 172 3.91e-14 66.2
MsG0480023432.01.T02 AT5G57750 59.524 42 17 0 2 43 124 165 4.01e-14 64.7
MsG0480023432.01.T02 AT4G17245 57.143 49 20 1 1 48 103 151 4.95e-14 63.5
MsG0480023432.01.T02 AT5G05810 58.537 41 17 0 2 42 148 188 5.17e-14 65.9
MsG0480023432.01.T02 AT3G14320 55.814 43 19 0 1 43 89 131 5.67e-14 64.3
MsG0480023432.01.T02 AT3G48030 54.545 44 20 0 2 45 131 174 8.98e-14 64.7
MsG0480023432.01.T02 AT3G16720 38.667 75 43 2 2 73 121 195 1.11e-13 64.7
MsG0480023432.01.T02 AT4G40070 50.000 52 26 0 2 53 126 177 2.47e-13 63.5
MsG0480023432.01.T02 AT1G28040 61.905 42 16 0 2 43 255 296 2.74e-13 63.5
MsG0480023432.01.T02 AT5G66070 56.818 44 19 0 2 45 178 221 2.82e-13 62.8
MsG0480023432.01.T02 AT5G66070 56.818 44 19 0 2 45 178 221 2.82e-13 62.8
MsG0480023432.01.T02 AT5G27420 56.522 46 20 0 2 47 126 171 3.99e-13 63.2
MsG0480023432.01.T02 AT5G66070 56.818 44 19 0 2 45 202 245 4.05e-13 62.4
MsG0480023432.01.T02 AT5G10380 55.556 45 20 0 2 46 137 181 4.62e-13 62.8
MsG0480023432.01.T02 AT2G46493 59.524 42 17 0 2 43 140 181 5.44e-13 61.2
MsG0480023432.01.T02 AT1G74410 56.818 44 19 0 2 45 178 221 5.45e-13 62.0
MsG0480023432.01.T02 AT4G15975 54.545 44 20 0 2 45 78 121 6.09e-13 62.0
MsG0480023432.01.T02 AT2G35000 53.333 45 21 0 2 46 137 181 6.18e-13 62.8
MsG0480023432.01.T02 AT1G23980 52.174 46 22 0 2 47 146 191 8.53e-13 62.4
MsG0480023432.01.T02 AT3G62690 39.474 76 35 2 2 75 115 181 8.86e-13 61.6
MsG0480023432.01.T02 AT3G18930 51.111 45 22 0 2 46 158 202 9.23e-13 62.4
MsG0480023432.01.T02 AT3G18930 51.111 45 22 0 2 46 158 202 9.23e-13 62.4
MsG0480023432.01.T02 AT3G18930 51.111 45 22 0 2 46 158 202 9.23e-13 62.4
MsG0480023432.01.T02 AT2G27940 43.396 53 30 0 1 53 141 193 1.89e-12 60.5
MsG0480023432.01.T02 AT5G43420 58.537 41 17 0 2 42 140 180 2.96e-12 60.8
MsG0480023432.01.T02 AT2G25410 61.905 42 16 0 2 43 329 370 3.61e-12 60.5
MsG0480023432.01.T02 AT4G09110 56.818 44 19 0 2 45 125 168 3.96e-12 60.1
MsG0480023432.01.T02 AT3G11110 56.098 41 18 0 2 42 109 149 4.11e-12 58.5
MsG0480023432.01.T02 AT2G46494 57.143 42 18 0 2 43 318 359 5.16e-12 60.1
MsG0480023432.01.T02 AT2G47560 54.762 42 19 0 2 43 110 151 5.28e-12 59.3
MsG0480023432.01.T02 AT4G09120 56.818 44 19 0 2 45 125 168 7.61e-12 59.7
MsG0480023432.01.T02 AT1G35330 54.545 44 20 0 2 45 131 174 8.70e-12 59.3
MsG0480023432.01.T02 AT5G06490 40.678 59 35 0 2 60 131 189 8.70e-12 58.2
MsG0480023432.01.T02 AT2G17730 54.762 42 19 0 2 43 198 239 1.01e-11 58.5
MsG0480023432.01.T02 AT5G58580 52.174 46 22 0 1 46 139 184 1.04e-11 58.9
MsG0480023432.01.T02 AT5G36001 59.524 42 17 0 2 43 266 307 1.11e-11 58.9
MsG0480023432.01.T02 AT4G35840 54.545 44 20 0 2 45 193 236 1.13e-11 58.5
MsG0480023432.01.T02 AT1G22500 48.889 45 23 0 2 46 120 164 1.55e-11 58.9
MsG0480023432.01.T02 AT3G61550 53.191 47 22 0 2 48 138 184 1.56e-11 57.8
MsG0480023432.01.T02 AT1G35630 40.278 72 41 2 2 72 235 305 2.11e-11 58.2
MsG0480023432.01.T02 AT4G35840 54.762 42 19 0 4 45 227 268 2.96e-11 57.8
MsG0480023432.01.T02 AT1G04360 52.273 44 21 0 2 45 136 179 3.01e-11 57.8
MsG0480023432.01.T02 AT5G42200 47.619 42 22 0 2 43 106 147 3.47e-11 56.2
MsG0480023432.01.T02 AT2G46495 57.143 42 18 0 2 43 322 363 3.53e-11 57.8
MsG0480023432.01.T02 AT4G10160 46.667 45 24 0 2 46 99 143 3.83e-11 57.0
MsG0480023432.01.T02 AT2G35910 40.909 66 39 0 2 67 149 214 3.85e-11 57.0
MsG0480023432.01.T02 AT2G46495 57.143 42 18 0 2 43 294 335 4.30e-11 57.4
MsG0480023432.01.T02 AT4G10150 46.667 45 24 0 2 46 113 157 4.38e-11 57.0
MsG0480023432.01.T02 AT2G46160 51.064 47 23 0 2 48 140 186 6.19e-11 56.2
MsG0480023432.01.T02 AT2G46160 51.064 47 23 0 2 48 140 186 6.19e-11 56.2
MsG0480023432.01.T02 AT3G60220 46.809 47 25 0 2 48 119 165 6.34e-11 57.0
MsG0480023432.01.T02 AT3G47990 54.762 42 18 1 1 42 236 276 9.20e-11 56.6
MsG0480023432.01.T01 AT1G49220 50.000 154 65 6 5 151 69 217 1.25e-43 144
MsG0480023432.01.T01 AT1G49210 49.045 157 74 4 5 157 69 223 2.90e-43 143
MsG0480023432.01.T01 AT1G49200 48.428 159 72 6 5 157 70 224 1.85e-41 138
MsG0480023432.01.T01 AT1G49230 55.652 115 47 1 46 156 105 219 3.80e-39 132
MsG0480023432.01.T01 AT3G18773 52.542 118 53 2 43 157 101 218 6.92e-39 131
MsG0480023432.01.T01 AT5G05280 51.961 102 46 2 28 128 70 169 2.90e-29 105
MsG0480023432.01.T01 AT1G76410 50.617 81 40 0 40 120 72 152 2.77e-25 95.9
MsG0480023432.01.T01 AT5G01880 50.575 87 38 3 43 128 77 159 5.21e-25 94.4
MsG0480023432.01.T01 AT1G20823 49.398 83 42 0 36 118 75 157 3.42e-24 93.6
MsG0480023432.01.T01 AT3G10910 56.164 73 31 1 46 118 89 160 8.42e-24 92.0
MsG0480023432.01.T01 AT5G47610 47.368 76 40 0 55 130 90 165 6.18e-21 84.3
MsG0480023432.01.T01 AT4G40070 31.757 148 94 4 3 147 57 200 1.05e-19 84.0
MsG0480023432.01.T01 AT2G17450 40.860 93 44 2 36 117 55 147 7.31e-19 79.3
MsG0480023432.01.T01 AT3G05200 37.879 132 53 4 49 153 103 232 9.70e-19 82.0
MsG0480023432.01.T01 AT4G17245 59.016 61 24 1 55 114 85 145 2.89e-18 77.4
MsG0480023432.01.T01 AT1G72310 63.265 49 18 0 70 118 125 173 5.52e-18 79.3
MsG0480023432.01.T01 AT1G53820 37.963 108 61 4 26 131 77 180 7.42e-18 79.0
MsG0480023432.01.T01 AT4G09110 43.529 85 46 1 35 117 84 168 1.34e-17 78.2
MsG0480023432.01.T01 AT3G16720 35.780 109 63 4 41 145 90 195 2.37e-17 77.4
MsG0480023432.01.T01 AT4G35480 57.143 56 23 1 71 125 112 167 2.84e-17 75.5
MsG0480023432.01.T01 AT1G35330 43.902 82 44 1 38 117 93 174 3.66e-17 77.0
MsG0480023432.01.T01 AT4G09120 44.706 85 45 1 35 117 84 168 4.18e-17 77.0
MsG0480023432.01.T01 AT3G03550 60.000 50 20 0 71 120 158 207 5.00e-17 77.0
MsG0480023432.01.T01 AT3G14320 47.143 70 35 1 46 115 64 131 6.44e-17 74.7
MsG0480023432.01.T01 AT5G17600 43.373 83 44 2 33 114 104 184 1.04e-16 76.3
MsG0480023432.01.T01 AT1G72200 30.000 150 75 5 3 144 74 201 1.06e-16 76.3
MsG0480023432.01.T01 AT4G17905 68.182 44 14 0 71 114 154 197 1.77e-16 75.1
MsG0480023432.01.T01 AT4G17905 68.182 44 14 0 71 114 180 223 1.80e-16 75.1
MsG0480023432.01.T01 AT2G20030 39.583 96 55 2 46 139 99 193 1.89e-16 75.5
MsG0480023432.01.T01 AT4G15975 43.056 72 39 1 46 117 52 121 2.07e-16 73.9
MsG0480023432.01.T01 AT2G18650 40.964 83 49 0 36 118 90 172 2.14e-16 75.5
MsG0480023432.01.T01 AT1G22500 33.898 118 73 2 3 118 50 164 2.90e-16 75.1
MsG0480023432.01.T01 AT5G57750 39.474 76 46 0 40 115 90 165 3.94e-16 72.8
MsG0480023432.01.T01 AT1G35625 36.538 104 64 2 42 144 203 305 6.45e-16 73.6
MsG0480023432.01.T01 AT3G62690 37.500 104 53 3 46 147 88 181 7.51e-16 72.8
MsG0480023432.01.T01 AT4G09130 45.946 74 38 1 46 117 92 165 1.30e-15 73.2
MsG0480023432.01.T01 AT4G30400 39.241 79 48 0 36 114 98 176 1.83e-15 72.8
MsG0480023432.01.T01 AT4G28890 44.286 70 38 1 46 115 98 166 1.92e-15 72.8
MsG0480023432.01.T01 AT5G27420 44.737 76 40 1 46 119 96 171 2.70e-15 72.0
MsG0480023432.01.T01 AT1G72220 46.970 66 31 1 70 131 175 240 3.70e-15 72.0
MsG0480023432.01.T01 AT2G34990 34.579 107 64 3 14 114 32 138 4.01e-15 71.2
MsG0480023432.01.T01 AT2G34990 34.579 107 64 3 14 114 54 160 4.42e-15 71.2
MsG0480023432.01.T01 AT1G35630 36.538 104 64 2 42 144 203 305 4.69e-15 71.2
MsG0480023432.01.T01 AT2G35000 34.951 103 63 2 20 118 79 181 5.91e-15 71.2
MsG0480023432.01.T01 AT5G05810 44.928 69 37 1 46 114 121 188 6.89e-15 71.2
MsG0480023432.01.T01 AT5G06490 32.143 112 70 1 26 131 77 188 8.42e-15 68.9
MsG0480023432.01.T01 AT5G66070 40.206 97 51 3 25 117 128 221 9.59e-15 69.3
MsG0480023432.01.T01 AT5G66070 40.206 97 51 3 25 117 128 221 9.59e-15 69.3
MsG0480023432.01.T01 AT2G25410 38.889 90 53 1 28 115 281 370 1.31e-14 70.5
MsG0480023432.01.T01 AT1G74410 37.113 97 57 3 24 117 126 221 1.33e-14 68.9
MsG0480023432.01.T01 AT4G33565 44.286 70 37 1 71 138 216 285 1.39e-14 70.1
MsG0480023432.01.T01 AT1G23980 36.905 84 52 1 36 119 109 191 1.53e-14 70.1
MsG0480023432.01.T01 AT1G28040 40.244 82 48 1 35 115 215 296 2.01e-14 69.3
MsG0480023432.01.T01 AT3G19140 31.858 113 72 2 3 115 15 122 2.14e-14 66.6
MsG0480023432.01.T01 AT2G47560 44.595 74 40 1 43 115 78 151 2.39e-14 68.2
MsG0480023432.01.T01 AT4G09100 38.889 72 42 2 46 115 57 128 2.92e-14 65.9
MsG0480023432.01.T01 AT3G18930 33.673 98 56 2 33 121 108 205 3.41e-14 69.3
MsG0480023432.01.T01 AT3G18930 33.673 98 56 2 33 121 108 205 3.41e-14 69.3
MsG0480023432.01.T01 AT3G18930 33.673 98 56 2 33 121 108 205 3.41e-14 69.3
MsG0480023432.01.T01 AT3G48030 52.083 48 23 0 70 117 127 174 3.74e-14 68.2
MsG0480023432.01.T01 AT2G27940 35.000 80 50 1 46 125 116 193 4.15e-14 67.8
MsG0480023432.01.T01 AT5G66070 38.776 98 53 3 24 117 151 245 4.39e-14 67.8
MsG0480023432.01.T01 AT3G48030 53.191 47 22 0 71 117 206 252 4.39e-14 68.6
MsG0480023432.01.T01 AT5G10380 56.250 48 21 0 71 118 134 181 4.60e-14 68.2
MsG0480023432.01.T01 AT2G35910 36.170 94 59 1 46 139 122 214 7.70e-14 66.6
MsG0480023432.01.T01 AT2G46493 37.805 82 50 1 35 115 100 181 1.20e-13 65.5
MsG0480023432.01.T01 AT2G46494 37.805 82 50 1 35 115 278 359 1.29e-13 67.4
MsG0480023432.01.T01 AT2G46160 30.579 121 69 3 29 140 86 200 1.38e-13 65.9
MsG0480023432.01.T01 AT2G46160 30.579 121 69 3 29 140 86 200 1.38e-13 65.9
MsG0480023432.01.T01 AT5G40250 51.020 49 24 0 70 118 141 189 1.50e-13 67.4
MsG0480023432.01.T01 AT5G42200 41.538 65 37 1 51 115 84 147 1.57e-13 64.7
MsG0480023432.01.T01 AT5G07040 25.439 114 84 1 3 115 24 137 1.76e-13 64.7
MsG0480023432.01.T01 AT2G17730 36.250 80 49 1 38 115 160 239 1.96e-13 65.9
MsG0480023432.01.T01 AT4G35840 34.343 99 59 2 25 117 138 236 2.11e-13 65.9
MsG0480023432.01.T01 AT4G10160 35.443 79 49 1 40 118 67 143 2.40e-13 65.5
MsG0480023432.01.T01 AT2G34000 36.559 93 55 2 44 133 60 151 3.48e-13 63.5
MsG0480023432.01.T01 AT5G43420 59.091 44 18 0 71 114 137 180 3.50e-13 66.2
MsG0480023432.01.T01 AT1G04360 31.897 116 78 1 3 117 64 179 3.73e-13 66.2
MsG0480023432.01.T01 AT5G53110 37.179 78 48 1 39 115 296 373 6.37e-13 65.5
MsG0480023432.01.T01 AT4G17920 42.254 71 39 1 49 117 85 155 6.94e-13 65.1
MsG0480023432.01.T01 AT4G10150 35.443 79 49 1 40 118 81 157 9.37e-13 63.9
MsG0480023432.01.T01 AT1G33480 31.683 101 64 3 46 145 76 172 1.75e-12 63.5
MsG0480023432.01.T01 AT2G46495 40.278 72 41 1 46 115 292 363 1.89e-12 64.3
MsG0480023432.01.T01 AT2G46495 40.278 72 41 1 46 115 264 335 1.94e-12 63.9
MsG0480023432.01.T01 AT1G32361 40.278 72 40 2 46 117 131 199 2.19e-12 63.9
MsG0480023432.01.T01 AT4G26400 43.836 73 33 2 42 114 218 282 2.39e-12 63.9
MsG0480023432.01.T01 AT4G26400 43.836 73 33 2 42 114 218 282 2.39e-12 63.9
MsG0480023432.01.T01 AT5G36001 57.447 47 20 0 69 115 261 307 2.54e-12 63.5
MsG0480023432.01.T01 AT2G35420 41.538 65 37 1 50 114 82 145 2.80e-12 62.8
MsG0480023432.01.T01 AT1G53010 31.298 131 73 4 4 120 51 178 5.19e-12 61.2
MsG0480023432.01.T01 AT5G58580 38.158 76 47 0 43 118 109 184 5.46e-12 62.4
MsG0480023432.01.T01 AT3G61550 43.478 69 33 1 72 140 136 198 7.75e-12 61.2
MsG0480023432.01.T01 AT2G42360 39.130 69 42 0 46 114 82 150 1.06e-11 61.2
MsG0480023432.01.T01 AT3G11110 56.098 41 18 0 74 114 109 149 1.18e-11 59.7
MsG0480023432.01.T01 AT2G18670 34.783 69 45 0 46 114 84 152 2.07e-11 59.7
MsG0480023432.01.T01 AT2G37580 39.189 74 40 1 41 114 116 184 2.15e-11 60.5
MsG0480023432.01.T01 AT2G42350 34.118 85 51 2 33 114 60 142 3.10e-11 59.7
MsG0480023432.01.T01 AT4G09560 41.096 73 41 2 44 115 206 277 3.18e-11 60.8
MsG0480023432.01.T01 AT2G03000 31.461 89 56 2 30 114 435 522 4.03e-11 60.5

Find 34 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAATCCATGGTTGCATTT+AGG 0.236983 4:-85142834 None:intergenic
TTGCATTAAACTCCATTATA+AGG 0.292690 4:+85142590 MsG0480023432.01.T01:CDS
ACCACTAGAACCTGAAGATT+TGG 0.300487 4:+85143001 MsG0480023432.01.T01:CDS
CATTATAAGGTGTGCCTTAA+GGG 0.301317 4:+85142603 MsG0480023432.01.T01:CDS
TGAATCGTTATAATAGTTTC+TGG 0.311667 4:-85142978 None:intergenic
CGAAGAGTCGTTGTTGTTGA+TGG 0.313102 4:-85142638 None:intergenic
CCATTATAAGGTGTGCCTTA+AGG 0.325361 4:+85142602 MsG0480023432.01.T01:CDS
AGCAAATAAAAGCACATAAT+AGG 0.335356 4:-85142564 None:intergenic
TAGTTACGCTCCAAATCTTC+AGG 0.356200 4:-85143011 None:intergenic
CTTGAAACTTGTCGGAAGAT+TGG 0.358710 4:+85142921 MsG0480023432.01.T01:CDS
CCTTAAGGCACACCTTATAA+TGG 0.373664 4:-85142602 None:intergenic
AAGATTTGGAGCGTAACTAT+AGG 0.385286 4:+85143015 MsG0480023432.01.T01:CDS
CAACAACAATTCACCTCAAT+TGG 0.398418 4:+85142672 MsG0480023432.01.T01:CDS
TCTGGCACTGGCAACACAAT+TGG 0.406141 4:-85142960 None:intergenic
ATGTTCGTTGCATTGACAAA+TGG 0.437642 4:+85142856 MsG0480023432.01.T01:CDS
AGATTTGGAGCGTAACTATA+GGG 0.450405 4:+85143016 MsG0480023432.01.T01:CDS
AATGCCTTCTTGAAACTTGT+CGG 0.456546 4:+85142913 MsG0480023432.01.T01:CDS
GTTATAATAGTTTCTGGCAC+TGG 0.477505 4:-85142972 None:intergenic
CAGCTGAATAACTCACTGTT+GGG 0.480794 4:-85142731 None:intergenic
AGAAGGCATTGTCTACACTT+TGG 0.485230 4:-85142900 None:intergenic
GATCCTTTGTTGACCAATTG+AGG 0.485311 4:-85142685 None:intergenic
TTGCATTGACAAATGGCTAA+AGG 0.492896 4:+85142863 MsG0480023432.01.T01:CDS
GGCTACGTTTGAAACCCTTA+AGG 0.504858 4:-85142617 None:intergenic
TCGGAAGATTGGTGGGTCGC+AGG 0.513588 4:+85142932 MsG0480023432.01.T01:CDS
GAAACTTGTCGGAAGATTGG+TGG 0.516541 4:+85142924 MsG0480023432.01.T01:CDS
TCAGCTGAATAACTCACTGT+TGG 0.529659 4:-85142732 None:intergenic
AAACTTGTCGGAAGATTGGT+GGG 0.571944 4:+85142925 MsG0480023432.01.T01:CDS
TCTTCCGACAAGTTTCAAGA+AGG 0.582332 4:-85142917 None:intergenic
TGTCTCTCAGAGTTCACAAA+GGG 0.586259 4:+85142792 MsG0480023432.01.T01:CDS
TCCAAATCTTCAGGTTCTAG+TGG 0.587103 4:-85143002 None:intergenic
ATACACTCTATATCTAGACT+TGG 0.610683 4:-85142765 None:intergenic
TCACCTCAATTGGTCAACAA+AGG 0.615305 4:+85142682 MsG0480023432.01.T01:CDS
TGCAACGAACATGAAATCCA+TGG 0.629921 4:-85142845 None:intergenic
ATGTCTCTCAGAGTTCACAA+AGG 0.686490 4:+85142791 MsG0480023432.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGAATCGTTATAATAGTTTC+TGG - Chr4:85142981-85143000 None:intergenic 25.0%
! TTGCATTAAACTCCATTATA+AGG + Chr4:85142590-85142609 MsG0480023432.01.T01:CDS 25.0%
!! AGCAAATAAAAGCACATAAT+AGG - Chr4:85142567-85142586 None:intergenic 25.0%
ATACACTCTATATCTAGACT+TGG - Chr4:85142768-85142787 None:intergenic 30.0%
! ATTTTACCTAAATGCAACCA+TGG + Chr4:85142828-85142847 MsG0480023432.01.T01:CDS 30.0%
AATGCCTTCTTGAAACTTGT+CGG + Chr4:85142913-85142932 MsG0480023432.01.T01:CDS 35.0%
CAACAACAATTCACCTCAAT+TGG + Chr4:85142672-85142691 MsG0480023432.01.T01:CDS 35.0%
CATTATAAGGTGTGCCTTAA+GGG + Chr4:85142603-85142622 MsG0480023432.01.T01:CDS 35.0%
TGAAATCCATGGTTGCATTT+AGG - Chr4:85142837-85142856 None:intergenic 35.0%
! AAGATTTGGAGCGTAACTAT+AGG + Chr4:85143015-85143034 MsG0480023432.01.T01:CDS 35.0%
! AGATTTGGAGCGTAACTATA+GGG + Chr4:85143016-85143035 MsG0480023432.01.T01:CDS 35.0%
! ATGTTCGTTGCATTGACAAA+TGG + Chr4:85142856-85142875 MsG0480023432.01.T01:CDS 35.0%
! TTGCATTGACAAATGGCTAA+AGG + Chr4:85142863-85142882 MsG0480023432.01.T01:CDS 35.0%
!! GTTATAATAGTTTCTGGCAC+TGG - Chr4:85142975-85142994 None:intergenic 35.0%
AAACTTGTCGGAAGATTGGT+GGG + Chr4:85142925-85142944 MsG0480023432.01.T01:CDS 40.0%
ACCACTAGAACCTGAAGATT+TGG + Chr4:85143001-85143020 MsG0480023432.01.T01:CDS 40.0%
ATGTCTCTCAGAGTTCACAA+AGG + Chr4:85142791-85142810 MsG0480023432.01.T01:CDS 40.0%
CAGCTGAATAACTCACTGTT+GGG - Chr4:85142734-85142753 None:intergenic 40.0%
CCATTATAAGGTGTGCCTTA+AGG + Chr4:85142602-85142621 MsG0480023432.01.T01:CDS 40.0%
CCTTAAGGCACACCTTATAA+TGG - Chr4:85142605-85142624 None:intergenic 40.0%
CTTGAAACTTGTCGGAAGAT+TGG + Chr4:85142921-85142940 MsG0480023432.01.T01:CDS 40.0%
GATCCTTTGTTGACCAATTG+AGG - Chr4:85142688-85142707 None:intergenic 40.0%
TAGTTACGCTCCAAATCTTC+AGG - Chr4:85143014-85143033 None:intergenic 40.0%
TCACCTCAATTGGTCAACAA+AGG + Chr4:85142682-85142701 MsG0480023432.01.T01:CDS 40.0%
TCAGCTGAATAACTCACTGT+TGG - Chr4:85142735-85142754 None:intergenic 40.0%
TCTTCCGACAAGTTTCAAGA+AGG - Chr4:85142920-85142939 None:intergenic 40.0%
TGCAACGAACATGAAATCCA+TGG - Chr4:85142848-85142867 None:intergenic 40.0%
TGTCTCTCAGAGTTCACAAA+GGG + Chr4:85142792-85142811 MsG0480023432.01.T01:CDS 40.0%
! TCCAAATCTTCAGGTTCTAG+TGG - Chr4:85143005-85143024 None:intergenic 40.0%
!! AGAAGGCATTGTCTACACTT+TGG - Chr4:85142903-85142922 None:intergenic 40.0%
GAAACTTGTCGGAAGATTGG+TGG + Chr4:85142924-85142943 MsG0480023432.01.T01:CDS 45.0%
! CGAAGAGTCGTTGTTGTTGA+TGG - Chr4:85142641-85142660 None:intergenic 45.0%
! GGCTACGTTTGAAACCCTTA+AGG - Chr4:85142620-85142639 None:intergenic 45.0%
!! TCTGGCACTGGCAACACAAT+TGG - Chr4:85142963-85142982 None:intergenic 50.0%
! TCGGAAGATTGGTGGGTCGC+AGG + Chr4:85142932-85142951 MsG0480023432.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 85142550 85143046 85142550 ID=MsG0480023432.01;Name=MsG0480023432.01
Chr4 mRNA 85142570 85143046 85142570 ID=MsG0480023432.01.T01;Parent=MsG0480023432.01;Name=MsG0480023432.01.T01;_AED=0.15;_eAED=0.19;_QI=0|-1|0|1|-1|1|1|0|158
Chr4 exon 85142570 85143046 85142570 ID=MsG0480023432.01.T01:exon:2812;Parent=MsG0480023432.01.T01
Chr4 CDS 85142570 85143046 85142570 ID=MsG0480023432.01.T01:cds;Parent=MsG0480023432.01.T01
Chr4 mRNA 85142786 85143046 85142786 ID=MsG0480023432.01.T02;Parent=MsG0480023432.01;Name=MsG0480023432.01.T02;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|0|1|0|86
Chr4 exon 85142786 85143046 85142786 ID=MsG0480023432.01.T02:exon:2813;Parent=MsG0480023432.01.T02
Chr4 CDS 85142786 85143046 85142786 ID=MsG0480023432.01.T02:cds;Parent=MsG0480023432.01.T02
Chr4 mRNA 85142550 85142741 85142550 ID=MsG0480023432.01.T03;Parent=MsG0480023432.01;Name=MsG0480023432.01.T03;_AED=0.36;_eAED=0.36;_QI=0|-1|0|1|-1|0|1|0|63
Chr4 exon 85142550 85142741 85142550 ID=MsG0480023432.01.T03:exon:2814;Parent=MsG0480023432.01.T03
Chr4 CDS 85142550 85142741 85142550 ID=MsG0480023432.01.T03:cds;Parent=MsG0480023432.01.T03
Chr4 mRNA 85142847 85142882 85142847 ID=MsG0480023432.01.T04;Parent=MsG0480023432.01;Name=MsG0480023432.01.T04;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|0|1|0|11
Chr4 exon 85142847 85142882 85142847 ID=MsG0480023432.01.T04:exon:2815;Parent=MsG0480023432.01.T04
Chr4 CDS 85142847 85142882 85142847 ID=MsG0480023432.01.T04:cds;Parent=MsG0480023432.01.T04
Gene Sequence

>MsG0480023432.01.T03

ATGATAGTTGCTGTCCTATTATGTGCTTTTATTTGCTCACTTGCATTAAACTCCATTATAAGGTGTGCCTTAAGGGTTTCAAACGTAGCCATCAACAACAACGACTCTTCGTTGAGTTCGAGCAACAACAATTCACCTCAATTGGTCAACAAAGGATCAAGAAGAAAGTTCTCAAGAAATTCCCAACAGTGA

>MsG0480023432.01.T02

ATGATATGTCTCTCAGAGTTCACAAAGGGTGAAAAATTGCGCATTTTACCTAAATGCAACCATGGATTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCAAAGTGTAGACAATGCCTTCTTGAAACTTGTCGGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCAGTGCCAGAAACTATTATAACGATTCAACCACTAGAACCTGAAGATTTGGAGCGTAACTATAGGGAAATATAA

>MsG0480023432.01.T04

ATGGATTTCATGTTCGTTGCATTGACAAATGGCTAA

>MsG0480023432.01.T01

ATGTGCTTTTATTTGCTCACTTGCATTAAACTCCATTATAAGGTGTGCCTTAAGGGTTTCAAACGTAGCCATCAACAACAACGACTCTTCGTTGAGTTCGAGCAACAACAATTCACCTCAATTGGTCAACAAAGGATCAAGAAGAAAGTTCTCAAGAAATTCCCAACAGTGAGTTATTCAGCTGAGTTGAAGCTACCAAGTCTAGATATAGAGTGTATGATATGTCTCTCAGAGTTCACAAAGGGTGAAAAATTGCGCATTTTACCTAAATGCAACCATGGATTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCAAAGTGTAGACAATGCCTTCTTGAAACTTGTCGGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCAGTGCCAGAAACTATTATAACGATTCAACCACTAGAACCTGAAGATTTGGAGCGTAACTATAGGGAAATATAA

Protein sequence

>MsG0480023432.01.T03

MIVAVLLCAFICSLALNSIIRCALRVSNVAINNNDSSLSSSNNNSPQLVNKGSRRKFSRNSQQ*

>MsG0480023432.01.T02

MICLSEFTKGEKLRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPIVLPVPETIITIQPLEPEDLERNYREI*

>MsG0480023432.01.T04

MDFMFVALTNG*

>MsG0480023432.01.T01

MCFYLLTCIKLHYKVCLKGFKRSHQQQRLFVEFEQQQFTSIGQQRIKKKVLKKFPTVSYSAELKLPSLDIECMICLSEFTKGEKLRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPIVLPVPETIITIQPLEPEDLERNYREI*