AlfalfaGEDB | MsG0180004059.01

M. sativa cultivar ZhongmuNo.1 / MsG0180004059.01

KEGG: -
GO: -
PFAM: PF03479

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004059.01.T01	XP_024630808.2	98.16	163	2	1	1	162	113	275	5.52E-103	308

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004059.01.T01	Q8GWQ2	66.013	153	43	2	1	153	99	242	2.35E-53	173

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004059.01.T01	A0A072VM41	98.160	163	2	1	1	162	126	288	6.77e-103	307

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048896.01	MsG0180004059.01	-0.805503	1.293814e-49	6.856189e-47
MsG0180000352.01	MsG0180004059.01	-0.803888	2.811777e-49	1.429501e-46
MsG0180001029.01	MsG0180004059.01	0.811084	8.356714e-51	5.124843e-48
MsG0180001249.01	MsG0180004059.01	-0.807497	4.909989e-50	2.739097e-47
MsG0180001515.01	MsG0180004059.01	0.800919	1.149864e-48	5.420023e-46
MsG0180003237.01	MsG0180004059.01	0.816439	5.528272e-52	3.917098e-49
MsG0180003320.01	MsG0180004059.01	0.805082	1.585123e-49	8.309808e-47
MsG0180003453.01	MsG0180004059.01	-0.805020	1.633259e-49	8.548309e-47
MsG0180004059.01	MsG0180004424.01	0.820789	5.695672e-53	4.550836e-50
MsG0180004059.01	MsG0180004830.01	0.816942	4.263704e-52	3.063432e-49
MsG0180004059.01	MsG0180005127.01	0.801087	1.062509e-48	5.029730e-46
MsG0180004059.01	MsG0180005130.01	0.827235	1.749685e-54	1.679229e-51
MsG0180004059.01	MsG0180005143.01	0.823767	1.159888e-53	1.008171e-50
MsG0180004059.01	MsG0180005146.01	0.807447	5.032851e-50	2.803909e-47
MsG0180004059.01	MsG0180005353.01	0.824590	7.434149e-54	6.614445e-51
MsG0180004059.01	MsG0180005879.01	-0.802991	4.314553e-49	2.143338e-46
MsG0180004059.01	MsG0180006253.01	0.814536	1.465632e-51	9.860444e-49
MsG0180004059.01	MsG0280006316.01	0.827503	1.508896e-54	1.459467e-51
MsG0180004059.01	MsG0280007677.01	0.809724	1.642628e-50	9.718294e-48
MsG0180004059.01	MsG0280007689.01	0.803034	4.225881e-49	2.101657e-46
MsG0180004059.01	MsG0280007910.01	0.800435	1.443212e-48	6.719581e-46
MsG0180004059.01	MsG0280009103.01	-0.808805	2.585797e-50	1.492692e-47
MsG0180004059.01	MsG0280009253.01	0.808010	3.820829e-50	2.160173e-47
MsG0180004059.01	MsG0280010496.01	-0.800365	1.491126e-48	6.930466e-46
MsG0180004059.01	MsG0280010623.01	0.835491	1.626610e-56	1.992303e-53
MsG0180004059.01	MsG0280011017.01	0.826541	2.563316e-54	2.410869e-51
MsG0180004059.01	MsG0280011279.01	-0.802276	6.059148e-49	2.955859e-46
MsG0180004059.01	MsG0380011632.01	-0.803102	4.090916e-49	2.038031e-46
MsG0180004059.01	MsG0380013111.01	-0.800080	1.704641e-48	7.865409e-46
MsG0180004059.01	MsG0380013213.01	0.818825	1.600996e-52	1.211288e-49
MsG0180004059.01	MsG0380015077.01	-0.805427	1.342128e-49	7.098535e-47
MsG0180004059.01	MsG0380015349.01	0.807528	4.838017e-50	2.700992e-47
MsG0180004059.01	MsG0380015660.01	0.802176	6.351992e-49	3.090785e-46
MsG0180004059.01	MsG0380016299.01	0.803550	3.304682e-49	1.665540e-46
MsG0180004059.01	MsG0380016452.01	-0.806286	8.855875e-50	4.788185e-47
MsG0180004059.01	MsG0380016458.01	0.822835	1.915339e-53	1.621401e-50
MsG0180004059.01	MsG0380016463.01	0.815052	1.126537e-51	7.684974e-49
MsG0180004059.01	MsG0380017200.01	0.817604	3.024971e-52	2.212971e-49
MsG0180004059.01	MsG0380017976.01	-0.800551	1.367022e-48	6.383349e-46
MsG0180004059.01	MsG0380018070.01	0.801460	8.910047e-49	4.257485e-46
MsG0180004059.01	MsG0480018406.01	0.823742	1.175750e-53	1.021234e-50
MsG0180004059.01	MsG0480018409.01	0.830964	2.182300e-55	2.335130e-52
MsG0180004059.01	MsG0480018439.01	0.844600	6.838447e-59	1.109657e-55
MsG0180004059.01	MsG0480018559.01	0.802427	5.640678e-49	2.762419e-46
MsG0180004059.01	MsG0480018617.01	0.819698	1.013024e-52	7.852310e-50
MsG0180004059.01	MsG0480018621.01	0.801456	8.927766e-49	4.265454e-46
MsG0180004059.01	MsG0480018625.01	0.800445	1.436401e-48	6.689481e-46
MsG0180004059.01	MsG0480018692.01	0.821430	4.055768e-53	3.298890e-50
MsG0180004059.01	MsG0480018693.01	0.804011	2.650575e-49	1.351770e-46
MsG0180004059.01	MsG0480018697.01	0.810727	9.982563e-51	6.064107e-48
MsG0180004059.01	MsG0480019301.01	0.804349	2.254353e-49	1.159694e-46
MsG0180004059.01	MsG0480019322.01	0.825599	4.293038e-54	3.931129e-51
MsG0180004059.01	MsG0480019325.01	0.801085	1.063355e-48	5.033447e-46
MsG0180004059.01	MsG0480019346.01	0.825047	5.799848e-54	5.228355e-51
MsG0180004059.01	MsG0480019348.01	0.807361	5.248186e-50	2.917262e-47
MsG0180004059.01	MsG0480020285.01	0.800500	1.400030e-48	6.529098e-46
MsG0180004059.01	MsG0480020539.01	0.834388	3.084876e-56	3.655458e-53
MsG0180004059.01	MsG0480021129.01	0.812667	3.777591e-51	2.416408e-48
MsG0180004059.01	MsG0480021133.01	0.804863	1.761396e-49	9.182624e-47
MsG0180004059.01	MsG0480021234.01	0.834120	3.601884e-56	4.233776e-53
MsG0180004059.01	MsG0480023104.01	-0.804106	2.533043e-49	1.294960e-46
MsG0180004059.01	MsG0480023429.01	0.825036	5.834262e-54	5.257670e-51
MsG0180004059.01	MsG0480023431.01	0.818372	2.028816e-52	1.516004e-49
MsG0180004059.01	MsG0480023432.01	0.817686	2.898953e-52	2.125588e-49
MsG0180004059.01	MsG0580024086.01	0.802528	5.374932e-49	2.638886e-46
MsG0180004059.01	MsG0580024649.01	0.818484	1.914007e-52	1.434544e-49
MsG0180004059.01	MsG0580024782.01	0.807480	4.951520e-50	2.760965e-47
MsG0180004059.01	MsG0580024944.01	-0.805956	1.039015e-49	5.570751e-47
MsG0180004059.01	MsG0580024982.01	-0.812876	3.399951e-51	2.186732e-48
MsG0180004059.01	MsG0580024994.01	0.839703	1.352160e-57	1.882437e-54
MsG0180004059.01	MsG0580025007.01	0.834801	2.429784e-56	2.914686e-53
MsG0180004059.01	MsG0580025023.01	0.811665	6.250177e-51	3.891848e-48
MsG0180004059.01	MsG0580025024.01	0.846346	2.301549e-59	3.949537e-56
MsG0180004059.01	MsG0580025961.01	0.812814	3.507567e-51	2.252180e-48
MsG0180004059.01	MsG0580025965.01	0.808919	2.444245e-50	1.415260e-47
MsG0180004059.01	MsG0580026148.01	0.823094	1.666655e-53	1.421224e-50
MsG0180004059.01	MsG0580026211.01	-0.816688	4.861597e-52	3.468355e-49
MsG0180004059.01	MsG0580026492.01	0.812021	5.226549e-51	3.285842e-48
MsG0180004059.01	MsG0580026521.01	0.823880	1.091358e-53	9.515737e-51
MsG0180004059.01	MsG0580027751.01	0.809621	1.728424e-50	1.019842e-47
MsG0180004059.01	MsG0580027752.01	0.818069	2.376159e-52	1.760544e-49
MsG0180004059.01	MsG0580027753.01	0.828123	1.070826e-54	1.054669e-51
MsG0180004059.01	MsG0580027776.01	0.821928	3.109648e-53	2.565196e-50
MsG0180004059.01	MsG0580027777.01	0.822647	2.118575e-53	1.783929e-50
MsG0180004059.01	MsG0580028587.01	0.828839	7.191962e-55	7.231613e-52
MsG0180004059.01	MsG0580029291.01	0.804828	1.791012e-49	9.328449e-47
MsG0180004059.01	MsG0580029937.01	0.835731	1.414671e-56	1.745219e-53
MsG0180004059.01	MsG0580029938.01	0.831702	1.436706e-55	1.571520e-52
MsG0180004059.01	MsG0680030754.01	-0.808660	2.776455e-50	1.596686e-47
MsG0180004059.01	MsG0680031200.01	0.840250	9.738419e-58	1.379150e-54
MsG0180004059.01	MsG0680032026.01	0.842810	2.059771e-58	3.159397e-55
MsG0180004059.01	MsG0680032461.01	0.834852	2.357858e-56	2.832942e-53
MsG0180004059.01	MsG0680033347.01	0.802452	5.572908e-49	2.730896e-46
MsG0180004059.01	MsG0680034316.01	0.807539	4.810644e-50	2.686476e-47
MsG0180004059.01	MsG0680034969.01	0.818089	2.350750e-52	1.742696e-49
MsG0180004059.01	MsG0680034974.01	0.842661	2.256106e-58	3.444417e-55
MsG0180004059.01	MsG0680034980.01	0.809888	1.514658e-50	8.999330e-48
MsG0180004059.01	MsG0780035930.01	0.813626	2.327285e-51	1.527613e-48
MsG0180004059.01	MsG0780035932.01	0.840149	1.034917e-57	1.461109e-54
MsG0180004059.01	MsG0780036054.01	0.805919	1.058150e-49	5.667792e-47
MsG0180004059.01	MsG0780036208.01	0.831696	1.441898e-55	1.576844e-52
MsG0180004059.01	MsG0780036258.01	0.815367	9.585481e-52	6.595902e-49
MsG0180004059.01	MsG0780036259.01	0.837289	5.676270e-57	7.339170e-54
MsG0180004059.01	MsG0780036376.01	0.822079	2.869503e-53	2.377175e-50
MsG0180004059.01	MsG0780036583.01	-0.803391	3.564326e-49	1.788997e-46
MsG0180004059.01	MsG0780036649.01	0.828112	1.077092e-54	1.060540e-51
MsG0180004059.01	MsG0780038657.01	0.816059	6.722625e-52	4.714557e-49
MsG0180004059.01	MsG0780038848.01	-0.800430	1.446677e-48	6.734934e-46
MsG0180004059.01	MsG0780039805.01	-0.800466	1.422341e-48	6.627285e-46
MsG0180004059.01	MsG0780040615.01	0.818623	1.779708e-52	1.338921e-49
MsG0180004059.01	MsG0780040658.01	0.822658	2.105697e-53	1.773601e-50
MsG0180004059.01	MsG0780040670.01	0.800971	1.122052e-48	5.296001e-46
MsG0180004059.01	MsG0780040716.01	0.824961	6.078412e-54	5.465823e-51
MsG0180004059.01	MsG0780040719.01	0.811208	7.853452e-51	4.832005e-48
MsG0180004059.01	MsG0780040977.01	0.811935	5.458472e-51	3.423420e-48
MsG0180004059.01	MsG0780040991.01	0.831739	1.407255e-55	1.541002e-52
MsG0180004059.01	MsG0780041289.01	-0.808120	3.620883e-50	2.053076e-47
MsG0180004059.01	MsG0880042728.01	0.801139	1.036852e-48	4.914597e-46
MsG0180004059.01	MsG0880043259.01	-0.812358	4.412489e-51	2.799646e-48
MsG0180004059.01	MsG0880043459.01	0.810294	1.237961e-50	7.433754e-48
MsG0180004059.01	MsG0880043530.01	0.820546	6.479353e-53	5.142131e-50
MsG0180004059.01	MsG0880043997.01	0.800044	1.733480e-48	7.991153e-46
MsG0180004059.01	MsG0880044026.01	0.808730	2.682231e-50	1.545313e-47
MsG0180004059.01	MsG0880044712.01	0.806908	6.545994e-50	3.596116e-47
MsG0180004059.01	MsG0880045851.01	0.803506	3.374186e-49	1.698647e-46
MsG0180004059.01	MsG0880046038.01	0.809917	1.492847e-50	8.876780e-48
MsG0180004059.01	MsG0880046759.01	-0.809980	1.446936e-50	8.618155e-48
MsG0180004059.01	MsG0880046870.01	0.800212	1.602311e-48	7.418090e-46
MsG0180004059.01	MsG0880046923.01	0.825892	3.658043e-54	3.377833e-51
MsG0180004059.01	MsG0880047312.01	0.830234	3.294086e-55	3.450364e-52
MsG0180004059.01	MsG0880047460.01	0.837130	6.231205e-57	8.017763e-54
MsG0180004059.01	MsG0880047537.01	0.845406	4.142836e-59	6.896873e-56
MsG0180004059.01	MsG0880047723.01	-0.801469	8.873630e-49	4.240985e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004059.01.T01	MTR_1g073860	98.160	163	2	1	1	162	126	288	1.72e-106	307
MsG0180004059.01.T01	MTR_1g044155	88.136	118	14	0	1	118	158	275	4.41e-56	180
MsG0180004059.01.T01	MTR_1g079810	66.897	145	40	1	1	145	106	242	4.74e-51	166
MsG0180004059.01.T01	MTR_3g068035	73.770	122	32	0	1	122	111	232	5.41e-51	166
MsG0180004059.01.T01	MTR_4g098450	69.421	121	37	0	1	121	108	228	8.14e-47	154
MsG0180004059.01.T01	MTR_7g080980	69.106	123	38	0	1	123	89	211	9.78e-47	153
MsG0180004059.01.T01	MTR_5g091630	65.574	122	42	0	1	122	79	200	3.91e-45	149
MsG0180004059.01.T01	MTR_5g011520	72.131	122	34	0	1	122	132	253	1.30e-44	149
MsG0180004059.01.T01	MTR_5g080580	68.644	118	37	0	1	118	121	238	4.13e-44	148
MsG0180004059.01.T01	MTR_8g036060	72.951	122	33	0	1	122	118	239	1.73e-42	144
MsG0180004059.01.T01	MTR_3g100470	48.936	141	68	2	1	137	106	246	7.62e-42	141
MsG0180004059.01.T01	MTR_5g066020	46.541	159	68	4	1	156	85	229	4.34e-41	138
MsG0180004059.01.T01	MTR_1g073870	65.323	124	28	3	10	133	61	169	6.01e-29	106
MsG0180004059.01.T01	MTR_1g079780	40.741	108	63	1	3	109	116	223	1.97e-19	83.6
MsG0180004059.01.T01	MTR_6g061670	38.739	111	65	1	1	108	135	245	4.29e-18	79.7
MsG0180004059.01.T01	MTR_6g061670	38.739	111	65	1	1	108	130	240	4.30e-18	79.7
MsG0180004059.01.T01	MTR_5g010330	35.032	157	85	6	8	155	146	294	7.63e-18	79.0
MsG0180004059.01.T01	MTR_1g061530	37.500	120	71	2	3	118	148	267	1.35e-17	79.0
MsG0180004059.01.T01	MTR_5g089600	29.921	127	78	3	1	116	109	235	6.20e-17	75.5
MsG0180004059.01.T01	MTR_8g036160	35.099	151	90	2	1	147	147	293	3.99e-16	74.7
MsG0180004059.01.T01	MTR_7g116320	40.566	106	63	0	3	108	150	255	4.82e-16	74.3
MsG0180004059.01.T01	MTR_8g078930	31.447	159	91	5	1	145	6	160	5.65e-16	71.2
MsG0180004059.01.T01	MTR_7g116320	38.983	118	68	1	3	116	150	267	4.23e-15	71.2
MsG0180004059.01.T01	MTR_7g074935	47.692	65	34	0	1	65	132	196	6.83e-15	70.9
MsG0180004059.01.T01	MTR_4g098460	39.286	112	58	3	3	108	88	195	6.92e-15	70.5
MsG0180004059.01.T01	MTR_1g076710	38.739	111	64	2	1	108	139	248	1.15e-14	70.5
MsG0180004059.01.T01	MTR_8g098390	37.736	106	62	3	6	108	176	280	1.77e-14	70.1
MsG0180004059.01.T01	MTR_4g055813	38.017	121	71	3	3	120	26	145	3.79e-14	68.6
MsG0180004059.01.T01	MTR_1g053685	29.655	145	92	2	1	135	117	261	5.13e-14	68.2
MsG0180004059.01.T01	MTR_4g098460	37.931	116	59	3	3	108	88	200	2.46e-13	66.2
MsG0180004059.01.T01	MTR_5g011620	29.078	141	96	2	1	139	120	258	4.18e-13	66.6
MsG0180004059.01.T01	MTR_7g077120	35.385	130	78	2	1	127	162	288	4.42e-13	65.9
MsG0180004059.01.T01	MTR_4g055803	37.500	120	69	3	3	116	132	251	4.87e-13	66.2
MsG0180004059.01.T01	MTR_5g011610	28.689	122	85	1	3	124	65	184	6.78e-13	65.5
MsG0180004059.01.T01	MTR_5g089700	31.148	122	72	3	1	112	107	226	1.55e-12	63.5
MsG0180004059.01.T01	MTR_1g032910	30.159	126	78	1	1	116	135	260	2.37e-12	63.5
MsG0180004059.01.T01	MTR_5g011680	30.233	129	82	3	3	124	149	276	4.47e-12	62.8
MsG0180004059.01.T01	MTR_4g101990	42.424	66	38	0	1	66	149	214	4.88e-12	63.2
MsG0180004059.01.T01	MTR_4g055833	36.885	122	71	3	1	116	127	248	7.68e-12	62.4
MsG0180004059.01.T01	MTR_4g057525	29.365	126	79	2	1	116	68	193	7.96e-12	61.6
MsG0180004059.01.T01	MTR_6g060670	39.623	106	62	2	3	108	184	287	1.66e-11	61.2
MsG0180004059.01.T01	MTR_4g057487	29.365	126	79	2	1	116	49	174	2.05e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180004059.01.T01	AT4G14465	66.013	153	43	2	1	153	99	242	2.39e-54	173
MsG0180004059.01.T01	AT3G04570	72.222	126	27	1	1	118	112	237	5.09e-46	153
MsG0180004059.01.T01	AT2G42940	63.115	122	45	0	1	122	85	206	6.54e-44	145
MsG0180004059.01.T01	AT4G17800	68.033	122	39	0	1	122	114	235	6.99e-44	147
MsG0180004059.01.T01	AT2G35270	63.710	124	45	0	1	124	110	233	9.23e-44	146
MsG0180004059.01.T01	AT1G76500	64.341	129	37	1	1	120	104	232	3.15e-41	140
MsG0180004059.01.T01	AT5G49700	48.366	153	69	3	1	143	88	240	1.57e-40	137
MsG0180004059.01.T01	AT2G45430	62.585	147	51	2	1	143	121	267	2.17e-40	138
MsG0180004059.01.T01	AT3G60870	65.487	113	37	1	1	113	91	201	1.83e-39	134
MsG0180004059.01.T01	AT4G12050	69.106	123	37	1	1	122	150	272	6.08e-39	135
MsG0180004059.01.T01	AT4G22810	68.000	125	37	1	1	122	137	261	9.05e-39	134
MsG0180004059.01.T01	AT3G55560	57.241	145	44	2	1	127	120	264	2.27e-36	128
MsG0180004059.01.T01	AT1G14490	46.980	149	69	3	1	139	54	202	2.87e-33	117
MsG0180004059.01.T01	AT1G14490	46.980	149	69	3	1	139	35	183	3.46e-33	117
MsG0180004059.01.T01	AT4G35390	65.254	118	39	1	1	116	95	212	5.37e-30	111
MsG0180004059.01.T01	AT1G20900	61.417	127	40	1	1	118	118	244	6.27e-28	105
MsG0180004059.01.T01	AT5G62260	38.462	117	69	1	3	116	167	283	1.66e-20	85.9
MsG0180004059.01.T01	AT4G17950	44.248	113	58	2	1	108	226	338	8.11e-20	85.5
MsG0180004059.01.T01	AT5G62260	39.450	109	63	1	3	108	167	275	5.15e-19	83.2
MsG0180004059.01.T01	AT5G62260	39.450	109	63	1	3	108	167	275	5.15e-19	83.2
MsG0180004059.01.T01	AT3G04590	37.037	108	68	0	1	108	176	283	1.13e-18	82.0
MsG0180004059.01.T01	AT4G12080	39.823	113	61	2	1	108	175	285	1.21e-18	81.6
MsG0180004059.01.T01	AT3G04590	37.037	108	68	0	1	108	176	283	1.28e-18	81.3
MsG0180004059.01.T01	AT1G63470	39.640	111	63	2	1	108	182	291	1.97e-18	81.3
MsG0180004059.01.T01	AT5G51590	38.053	113	63	2	1	108	183	293	3.50e-18	80.9
MsG0180004059.01.T01	AT4G25320	39.450	109	63	1	3	108	173	281	1.78e-17	78.6
MsG0180004059.01.T01	AT2G33620	39.640	111	64	2	1	108	168	278	1.29e-16	75.9
MsG0180004059.01.T01	AT2G33620	39.640	111	64	2	1	108	168	278	1.29e-16	75.9
MsG0180004059.01.T01	AT2G33620	39.640	111	64	2	1	108	168	278	1.29e-16	75.9
MsG0180004059.01.T01	AT2G33620	39.640	111	64	2	1	108	168	278	1.29e-16	75.9
MsG0180004059.01.T01	AT2G45850	38.596	114	67	1	1	111	167	280	1.75e-15	72.8
MsG0180004059.01.T01	AT2G45850	38.596	114	67	1	1	111	167	280	1.75e-15	72.8
MsG0180004059.01.T01	AT2G45850	37.500	112	67	1	1	109	167	278	2.15e-14	69.3
MsG0180004059.01.T01	AT1G63480	31.544	149	84	5	1	132	165	312	3.39e-13	66.6
MsG0180004059.01.T01	AT1G63480	31.544	149	84	5	1	132	165	312	3.39e-13	66.6
MsG0180004059.01.T01	AT1G63480	31.544	149	84	5	1	132	159	306	3.70e-13	66.2
MsG0180004059.01.T01	AT1G63480	31.544	149	84	5	1	132	159	306	3.70e-13	66.2
MsG0180004059.01.T01	AT1G63480	31.544	149	84	5	1	132	159	306	3.70e-13	66.2
MsG0180004059.01.T01	AT1G63480	31.544	149	84	5	1	132	159	306	3.70e-13	66.2
MsG0180004059.01.T01	AT1G63480	31.544	149	84	5	1	132	159	306	3.70e-13	66.2
MsG0180004059.01.T01	AT5G46640	44.643	112	57	2	1	108	185	295	6.63e-13	65.9
MsG0180004059.01.T01	AT4G00200	37.607	117	70	1	1	114	128	244	1.31e-12	64.7
MsG0180004059.01.T01	AT4G00200	37.607	117	70	1	1	114	128	244	1.31e-12	64.7
MsG0180004059.01.T01	AT4G22770	36.719	128	78	1	1	125	155	282	1.56e-12	64.3
MsG0180004059.01.T01	AT4G22770	36.719	128	78	1	1	125	155	282	1.56e-12	64.3
MsG0180004059.01.T01	AT3G61310	36.607	112	68	1	3	111	171	282	3.65e-11	60.5

Find 56 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTGTACTTGGCTGGAGGTC+AGG	0.342488	1:-72640287	MsG0180004059.01.T01:CDS
GGTGCTGTTGTAGCACTTCA+TGG	0.358357	1:-72640382	MsG0180004059.01.T01:CDS
CCTGCTCCACCAGGTTCAAC+TGG	0.375523	1:-72640316	MsG0180004059.01.T01:CDS
GTAGTTGGAGGTTGTGTTGT+TGG	0.411543	1:-72640259	MsG0180004059.01.T01:CDS
GGAGGTCAGGGTCAGGTAGT+TGG	0.413964	1:-72640274	MsG0180004059.01.T01:CDS
TGCAACTGATGACCAATTCC+TGG	0.414250	1:+72640076	None:intergenic
GGATCACCTCCACCAGGAAT+TGG	0.417679	1:-72640088	MsG0180004059.01.T01:CDS
CTACCTGGTCCTGCTCCACC+AGG	0.428797	1:-72640325	MsG0180004059.01.T01:CDS
GTGCAAGGTGGAGGAGCGTC+TGG	0.440396	1:-72640112	MsG0180004059.01.T01:CDS
CTTGGCTGGAGGTCAGGGTC+AGG	0.442843	1:-72640281	MsG0180004059.01.T01:CDS
AACTGGTCTTACAGTGTACT+TGG	0.444380	1:-72640299	MsG0180004059.01.T01:CDS
AGGAATTGGTCATCAGTTGC+AGG	0.445128	1:-72640074	MsG0180004059.01.T01:CDS
GTTGGAACTCTTGTTGCAGT+TGG	0.451198	1:-72640241	MsG0180004059.01.T01:CDS
TTGGTCATCAGTTGCAGGGT+GGG	0.456584	1:-72640069	MsG0180004059.01.T01:CDS
GCGGGAGGTGTGCAAGGTGG+AGG	0.466037	1:-72640121	MsG0180004059.01.T01:CDS
ACAAAGCATGAAGAAGGATC+TGG	0.467331	1:+72640043	None:intergenic
TGCACACCTCCCGCAGAACC+AGG	0.475741	1:+72640130	None:intergenic
CCAGTTGAACCTGGTGGAGC+AGG	0.482936	1:+72640316	None:intergenic
AATGAAGGGCCTGGTTCTGC+GGG	0.484847	1:-72640139	MsG0180004059.01.T01:CDS
GGTTCTGCGGGAGGTGTGCA+AGG	0.486519	1:-72640127	MsG0180004059.01.T01:CDS
CTGTTGTAGCACTTCATGGT+AGG	0.488288	1:-72640378	MsG0180004059.01.T01:CDS
GTGTACTTGGCTGGAGGTCA+GGG	0.493209	1:-72640286	MsG0180004059.01.T01:CDS
TTCTGCTATATCAGCTCCAC+CGG	0.501001	1:+72640504	None:intergenic
AGGTAGAAAAGTCCCGGTTA+AGG	0.506619	1:+72640342	None:intergenic
GATGATAATGATAATAATGA+AGG	0.507615	1:-72640154	MsG0180004059.01.T01:CDS
GGTCAGGGTCAGGTAGTTGG+AGG	0.515248	1:-72640271	MsG0180004059.01.T01:CDS
CTTAGACAACCTTCAGCTCC+TGG	0.520193	1:-72640403	MsG0180004059.01.T01:CDS
AATTATACAAAGCATGAAGA+AGG	0.533761	1:+72640037	None:intergenic
GGTCTTACAGTGTACTTGGC+TGG	0.537231	1:-72640295	MsG0180004059.01.T01:CDS
AATGATAATAATGAAGGGCC+TGG	0.537636	1:-72640148	MsG0180004059.01.T01:CDS
TAATGAAGGGCCTGGTTCTG+CGG	0.545608	1:-72640140	MsG0180004059.01.T01:CDS
GTTTGTGTTCTCAGTGGAAG+TGG	0.555754	1:-72640445	MsG0180004059.01.T01:CDS
GAACCTGGTGGAGCAGGACC+AGG	0.556098	1:+72640322	None:intergenic
GTGTGGCACAATTCGCAAGA+AGG	0.565025	1:-72640480	MsG0180004059.01.T01:CDS
AGCCATGTCATGGAGGTAGC+CGG	0.569908	1:-72640523	None:intergenic
GAAGGGCCTGGTTCTGCGGG+AGG	0.573762	1:-72640136	MsG0180004059.01.T01:CDS
CGCGGTGTTTGTGTTCTCAG+TGG	0.579327	1:-72640451	MsG0180004059.01.T01:CDS
TCATTATCATCGTCATCAAG+TGG	0.580583	1:+72640166	None:intergenic
ACTGTAAGACCAGTTGAACC+TGG	0.584188	1:+72640307	None:intergenic
AGGACCAGGTAGAAAAGTCC+CGG	0.591266	1:+72640336	None:intergenic
TCTGCGGGAGGTGTGCAAGG+TGG	0.595107	1:-72640124	MsG0180004059.01.T01:CDS
ACAACAGCACCAGGAGCTGA+AGG	0.601528	1:+72640394	None:intergenic
TGAAGTGCTACAACAGCACC+AGG	0.605157	1:+72640385	None:intergenic
ATGATAATGATAATAATGAA+GGG	0.605731	1:-72640153	MsG0180004059.01.T01:CDS
CAAGGTGGAGGAGCGTCTGG+TGG	0.620899	1:-72640109	MsG0180004059.01.T01:CDS
GGAATTGGTCATCAGTTGCA+GGG	0.626929	1:-72640073	MsG0180004059.01.T01:CDS
TCTGGTGGATCACCTCCACC+AGG	0.634778	1:-72640094	MsG0180004059.01.T01:CDS
TGATGACCAATTCCTGGTGG+AGG	0.640940	1:+72640082	None:intergenic
AGCTGATATAGCAGAAAGTG+TGG	0.642948	1:-72640497	MsG0180004059.01.T01:CDS
CTTACAGTGTACTTGGCTGG+AGG	0.650202	1:-72640292	MsG0180004059.01.T01:CDS
ATTGGTCATCAGTTGCAGGG+TGG	0.653304	1:-72640070	MsG0180004059.01.T01:CDS
AACTGATGACCAATTCCTGG+TGG	0.683488	1:+72640079	None:intergenic
CATGTCATGGAGGTAGCCGG+TGG	0.697813	1:-72640520	None:intergenic
GTAAGACCAGTTGAACCTGG+TGG	0.698978	1:+72640310	None:intergenic
AGTAGCATTAGTAAACGTAG+CGG	0.707477	1:+72640201	None:intergenic
TTCGCAAGAAGGCGTCAACG+CGG	0.746882	1:-72640469	MsG0180004059.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATGATAATGATAATAATGAA+GGG	-	Chr1:72640400-72640419	MsG0180004059.01.T01:CDS	15.0%
!!!	GATGATAATGATAATAATGA+AGG	-	Chr1:72640399-72640418	MsG0180004059.01.T01:CDS	20.0%
!!	TTTGAGATTTTGTCCTTAAC+CGG	-	Chr1:72640198-72640217	MsG0180004059.01.T01:CDS	30.0%
	AATGATAATAATGAAGGGCC+TGG	-	Chr1:72640405-72640424	MsG0180004059.01.T01:CDS	35.0%
	AGTAGCATTAGTAAACGTAG+CGG	+	Chr1:72640355-72640374	None:intergenic	35.0%
	TCATTATCATCGTCATCAAG+TGG	+	Chr1:72640390-72640409	None:intergenic	35.0%
!	TTGAGATTTTGTCCTTAACC+GGG	-	Chr1:72640199-72640218	MsG0180004059.01.T01:CDS	35.0%
	ACAAAGCATGAAGAAGGATC+TGG	+	Chr1:72640513-72640532	None:intergenic	40.0%
	AGCTGATATAGCAGAAAGTG+TGG	-	Chr1:72640056-72640075	MsG0180004059.01.T01:CDS	40.0%
!!	AACTGGTCTTACAGTGTACT+TGG	-	Chr1:72640254-72640273	MsG0180004059.01.T01:CDS	40.0%
	AACTGATGACCAATTCCTGG+TGG	+	Chr1:72640477-72640496	None:intergenic	45.0%
	ACTGTAAGACCAGTTGAACC+TGG	+	Chr1:72640249-72640268	None:intergenic	45.0%
	AGGAATTGGTCATCAGTTGC+AGG	-	Chr1:72640479-72640498	MsG0180004059.01.T01:CDS	45.0%
	AGGTAGAAAAGTCCCGGTTA+AGG	+	Chr1:72640214-72640233	None:intergenic	45.0%
	CTGTTGTAGCACTTCATGGT+AGG	-	Chr1:72640175-72640194	MsG0180004059.01.T01:CDS	45.0%
	GGAATTGGTCATCAGTTGCA+GGG	-	Chr1:72640480-72640499	MsG0180004059.01.T01:CDS	45.0%
	GTAGTTGGAGGTTGTGTTGT+TGG	-	Chr1:72640294-72640313	MsG0180004059.01.T01:CDS	45.0%
	GTTGGAACTCTTGTTGCAGT+TGG	-	Chr1:72640312-72640331	MsG0180004059.01.T01:CDS	45.0%
	GTTTGTGTTCTCAGTGGAAG+TGG	-	Chr1:72640108-72640127	MsG0180004059.01.T01:CDS	45.0%
	TGCAACTGATGACCAATTCC+TGG	+	Chr1:72640480-72640499	None:intergenic	45.0%
	TTCTGCTATATCAGCTCCAC+CGG	+	Chr1:72640052-72640071	None:intergenic	45.0%
!	TTAACCGGGACTTTTCTACC+TGG	-	Chr1:72640213-72640232	MsG0180004059.01.T01:CDS	45.0%
	AGGACCAGGTAGAAAAGTCC+CGG	+	Chr1:72640220-72640239	None:intergenic	50.0%
	ATTGGTCATCAGTTGCAGGG+TGG	-	Chr1:72640483-72640502	MsG0180004059.01.T01:CDS	50.0%
	CTTACAGTGTACTTGGCTGG+AGG	-	Chr1:72640261-72640280	MsG0180004059.01.T01:CDS	50.0%
	CTTAGACAACCTTCAGCTCC+TGG	-	Chr1:72640150-72640169	MsG0180004059.01.T01:CDS	50.0%
	GGTCTTACAGTGTACTTGGC+TGG	-	Chr1:72640258-72640277	MsG0180004059.01.T01:CDS	50.0%
	GTAAGACCAGTTGAACCTGG+TGG	+	Chr1:72640246-72640265	None:intergenic	50.0%
	GTGTGGCACAATTCGCAAGA+AGG	-	Chr1:72640073-72640092	MsG0180004059.01.T01:CDS	50.0%
	TGATGACCAATTCCTGGTGG+AGG	+	Chr1:72640474-72640493	None:intergenic	50.0%
	TTGGTCATCAGTTGCAGGGT+GGG	-	Chr1:72640484-72640503	MsG0180004059.01.T01:CDS	50.0%
!	TGAAGTGCTACAACAGCACC+AGG	+	Chr1:72640171-72640190	None:intergenic	50.0%
!!	GGTGCTGTTGTAGCACTTCA+TGG	-	Chr1:72640171-72640190	MsG0180004059.01.T01:CDS	50.0%
!!	TAATGAAGGGCCTGGTTCTG+CGG	-	Chr1:72640413-72640432	MsG0180004059.01.T01:CDS	50.0%
	ACAACAGCACCAGGAGCTGA+AGG	+	Chr1:72640162-72640181	None:intergenic	55.0%
	AGTGTACTTGGCTGGAGGTC+AGG	-	Chr1:72640266-72640285	MsG0180004059.01.T01:CDS	55.0%
	CGCGGTGTTTGTGTTCTCAG+TGG	-	Chr1:72640102-72640121	MsG0180004059.01.T01:CDS	55.0%
	GGATCACCTCCACCAGGAAT+TGG	-	Chr1:72640465-72640484	MsG0180004059.01.T01:CDS	55.0%
	GTGTACTTGGCTGGAGGTCA+GGG	-	Chr1:72640267-72640286	MsG0180004059.01.T01:CDS	55.0%
!!	AATGAAGGGCCTGGTTCTGC+GGG	-	Chr1:72640414-72640433	MsG0180004059.01.T01:CDS	55.0%
!!	TTCGCAAGAAGGCGTCAACG+CGG	-	Chr1:72640084-72640103	MsG0180004059.01.T01:CDS	55.0%
	CCAGTTGAACCTGGTGGAGC+AGG	+	Chr1:72640240-72640259	None:intergenic	60.0%
	CCTGCTCCACCAGGTTCAAC+TGG	-	Chr1:72640237-72640256	MsG0180004059.01.T01:CDS	60.0%
	GGAGGTCAGGGTCAGGTAGT+TGG	-	Chr1:72640279-72640298	MsG0180004059.01.T01:CDS	60.0%
	GGTCAGGGTCAGGTAGTTGG+AGG	-	Chr1:72640282-72640301	MsG0180004059.01.T01:CDS	60.0%
!	TCTGGTGGATCACCTCCACC+AGG	-	Chr1:72640459-72640478	MsG0180004059.01.T01:CDS	60.0%
	CTACCTGGTCCTGCTCCACC+AGG	-	Chr1:72640228-72640247	MsG0180004059.01.T01:CDS	65.0%
	CTTGGCTGGAGGTCAGGGTC+AGG	-	Chr1:72640272-72640291	MsG0180004059.01.T01:CDS	65.0%
	GAACCTGGTGGAGCAGGACC+AGG	+	Chr1:72640234-72640253	None:intergenic	65.0%
	TGCACACCTCCCGCAGAACC+AGG	+	Chr1:72640426-72640445	None:intergenic	65.0%
!	GGTTCTGCGGGAGGTGTGCA+AGG	-	Chr1:72640426-72640445	MsG0180004059.01.T01:CDS	65.0%
!	TCTGCGGGAGGTGTGCAAGG+TGG	-	Chr1:72640429-72640448	MsG0180004059.01.T01:CDS	65.0%
!!	CAAGGTGGAGGAGCGTCTGG+TGG	-	Chr1:72640444-72640463	MsG0180004059.01.T01:CDS	65.0%
!!	GTGCAAGGTGGAGGAGCGTC+TGG	-	Chr1:72640441-72640460	MsG0180004059.01.T01:CDS	65.0%
!	GCGGGAGGTGTGCAAGGTGG+AGG	-	Chr1:72640432-72640451	MsG0180004059.01.T01:CDS	70.0%
!!	GAAGGGCCTGGTTCTGCGGG+AGG	-	Chr1:72640417-72640436	MsG0180004059.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	72640039	72640536	72640039	ID=MsG0180004059.01;Name=MsG0180004059.01
Chr1	mRNA	72640039	72640536	72640039	ID=MsG0180004059.01.T01;Parent=MsG0180004059.01;Name=MsG0180004059.01.T01;_AED=0.48;_eAED=0.48;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|165
Chr1	exon	72640039	72640536	72640039	ID=MsG0180004059.01.T01:exon:5112;Parent=MsG0180004059.01.T01
Chr1	CDS	72640039	72640536	72640039	ID=MsG0180004059.01.T01:cds;Parent=MsG0180004059.01.T01

Gene Sequence

>MsG0180004059.01.T01

ATGGAGGTAGCCGGTGGAGCTGATATAGCAGAAAGTGTGGCACAATTCGCAAGAAGGCGTCAACGCGGTGTTTGTGTTCTCAGTGGAAGTGGCTCTGTAGCTAATGTTACTCTTAGACAACCTTCAGCTCCTGGTGCTGTTGTAGCACTTCATGGTAGGTTTGAGATTTTGTCCTTAACCGGGACTTTTCTACCTGGTCCTGCTCCACCAGGTTCAACTGGTCTTACAGTGTACTTGGCTGGAGGTCAGGGTCAGGTAGTTGGAGGTTGTGTTGTTGGAACTCTTGTTGCAGTTGGATCTGTTATGCTTATTGCCGCTACGTTTACTAATGCTACTTATGAGAGACTTCCACTTGATGACGATGATAATGATAATAATGAAGGGCCTGGTTCTGCGGGAGGTGTGCAAGGTGGAGGAGCGTCTGGTGGATCACCTCCACCAGGAATTGGTCATCAGTTGCAGGGTGGGCTTCCAGATCCTTCTTCATGCTTTGTATAA

Protein sequence

>MsG0180004059.01.T01

MEVAGGADIAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVVGGCVVGTLVAVGSVMLIAATFTNATYERLPLDDDDNDNNEGPGSAGGVQGGGASGGSPPPGIGHQLQGGLPDPSSCFV*