AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020327.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020327.01.T01 MTR_4g048070 95.833 192 8 0 9 200 54 245 1.25e-135 379
MsG0480020327.01.T01 MTR_4g048190 44.792 96 31 3 35 108 838 933 4.58e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020327.01.T01 AT5G09600 45.652 92 50 0 99 190 84 175 2.42e-23 92.4
MsG0480020327.01.T01 AT5G09600 45.652 92 50 0 99 190 111 202 5.62e-23 92.0
MsG0480020327.01.T01 AT5G09600 45.652 92 50 0 99 190 111 202 5.62e-23 92.0
MsG0480020327.01.T01 AT4G32210 45.652 92 50 0 99 190 111 202 5.62e-23 92.0

Find 67 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTAATAATTACAATTT+AGG 0.170978 4:-39031376 MsG0480020327.01.T01:three_prime_UTR
GGATGGTTTACCTAAGAATT+TGG 0.236328 4:-39037368 MsG0480020327.01.T01:CDS
TGCTAACGTGTTCAATTCTT+TGG 0.256606 4:-39037326 MsG0480020327.01.T01:intron
TCAATTTGCAATAGAATTGC+TGG 0.304214 4:-39031851 MsG0480020327.01.T01:CDS
AGCTTATTCTCCAAATTCTT+AGG 0.311338 4:+39037358 None:intergenic
CATGCTTTCCACATGTCATT+AGG 0.313221 4:-39031445 MsG0480020327.01.T01:three_prime_UTR
ACAGGAAGATGAGGAGATAA+TGG 0.320617 4:+39031902 None:intergenic
GATGGGAAATGAAAATTAAC+CGG 0.340612 4:-39031134 MsG0480020327.01.T01:three_prime_UTR
CACCAATAGCATTGGACTCT+TGG 0.361123 4:+39032135 None:intergenic
AAATTCTACCAAAGGACATT+TGG 0.373053 4:-39037389 MsG0480020327.01.T01:CDS
GAAAGCTGGGGCTGATAAAC+AGG 0.395418 4:+39031884 None:intergenic
AACAATTACTTGCAATTTGA+GGG 0.410821 4:+39031270 None:intergenic
ACCAGACTGCTTTGTCTCAC+TGG 0.412401 4:+39031931 None:intergenic
CATCAGAGATATCAGGCTCT+TGG 0.413078 4:-39032211 MsG0480020327.01.T01:intron
CAACAATTACTTGCAATTTG+AGG 0.415675 4:+39031269 None:intergenic
CTCAGAATCAAACACTGTTC+AGG 0.430029 4:+39031618 None:intergenic
TTGAAAGCGTCGAAGAAAGC+TGG 0.441687 4:+39031870 None:intergenic
GATATACATGAAAGTGGGTT+TGG 0.443895 4:-39031792 MsG0480020327.01.T01:CDS
GCTGACACATTGGGATTGGC+TGG 0.459366 4:-39031989 MsG0480020327.01.T01:CDS
AATTTGGAGAATAAGCTTGC+TGG 0.464287 4:-39037352 MsG0480020327.01.T01:CDS
CAGGAAGATGAGGAGATAAT+GGG 0.473682 4:+39031903 None:intergenic
AATTGCACTATACAGATGAT+AGG 0.483923 4:+39031679 None:intergenic
TTATATGATATACATGAAAG+TGG 0.485153 4:-39031798 MsG0480020327.01.T01:CDS
TAGAATACGAACTGGTAGAA+TGG 0.485364 4:+39031752 None:intergenic
TAAACCATCCAAATGTCCTT+TGG 0.487442 4:+39037381 None:intergenic
TGGACTGGACACTAATGTGC+TGG 0.504894 4:-39032191 MsG0480020327.01.T01:CDS
ACCAGTGAGACAAAGCAGTC+TGG 0.505843 4:-39031932 MsG0480020327.01.T01:CDS
GTGCTGGCTGGAGCTAGATA+TGG 0.506804 4:-39032175 MsG0480020327.01.T01:CDS
TGAAAGCGTCGAAGAAAGCT+GGG 0.509221 4:+39031871 None:intergenic
GAGATATCAGGCTCTTGGAC+TGG 0.510444 4:-39032206 MsG0480020327.01.T01:CDS
AACCAAGAGTCCAATGCTAT+TGG 0.513314 4:-39032137 MsG0480020327.01.T01:intron
TACATGAAAGTGGGTTTGGT+TGG 0.513953 4:-39031788 MsG0480020327.01.T01:CDS
CTGAACAGTGTTTGATTCTG+AGG 0.515913 4:-39031617 MsG0480020327.01.T01:intron
TATATGATATACATGAAAGT+GGG 0.518946 4:-39031797 MsG0480020327.01.T01:CDS
TTGATGAATAGAATACGAAC+TGG 0.519628 4:+39031744 None:intergenic
AAGGAACTCACCAATAGCAT+TGG 0.529259 4:+39032127 None:intergenic
ATGGGAAATGAAAATTAACC+GGG 0.539599 4:-39031133 MsG0480020327.01.T01:three_prime_UTR
ACAGATGATAGGACATGGCT+AGG 0.548357 4:+39031690 None:intergenic
GGGTGCTGACACATTGGGAT+TGG 0.554674 4:-39031993 MsG0480020327.01.T01:CDS
TCTACCAAAGGACATTTGGA+TGG 0.559586 4:-39037385 MsG0480020327.01.T01:CDS
CAATTACTTGCAATTTGAGG+GGG 0.560768 4:+39031272 None:intergenic
CTGGACACTAATGTGCTGGC+TGG 0.565168 4:-39032187 MsG0480020327.01.T01:CDS
AGAAACATTGAGAGAGGTGT+GGG 0.568821 4:-39032013 MsG0480020327.01.T01:CDS
AGGTGTGGGTGCTGACACAT+TGG 0.570843 4:-39031999 MsG0480020327.01.T01:CDS
TACATCACCGAAGTTTCAGA+TGG 0.579114 4:+39031309 None:intergenic
ATAGGGACTCAACACTCTGA+TGG 0.585666 4:-39032038 MsG0480020327.01.T01:intron
TTCAGATGGAAAACAGATGT+AGG 0.588499 4:+39031323 None:intergenic
GGCTGATAAACAGGAAGATG+AGG 0.588637 4:+39031893 None:intergenic
CAGATGATAGGACATGGCTA+GGG 0.600515 4:+39031691 None:intergenic
AAATCTCAACAGCAAGTAGG+TGG 0.601419 4:+39031717 None:intergenic
CAGAAATCTCAACAGCAAGT+AGG 0.602287 4:+39031714 None:intergenic
ATTACTTGCAATTTGAGGGG+GGG 0.604745 4:+39031274 None:intergenic
AAAGCAAGGTGACAGCAGCT+AGG 0.607874 4:+39031822 None:intergenic
GGTGTGGGTGCTGACACATT+GGG 0.614611 4:-39031998 MsG0480020327.01.T01:CDS
GCGGATGAAAATTCTACCAA+AGG 0.622077 4:-39037397 MsG0480020327.01.T01:CDS
AATTACTTGCAATTTGAGGG+GGG 0.624593 4:+39031273 None:intergenic
GAACTGGTAGAATGGATCAA+AGG 0.627943 4:+39031760 None:intergenic
ACAATTACTTGCAATTTGAG+GGG 0.628575 4:+39031271 None:intergenic
AATGAACTCCTAATGACATG+TGG 0.633045 4:+39031437 None:intergenic
TGTGCATGTTATTCTTTCAG+CGG 0.653592 4:-39037416 MsG0480020327.01.T01:CDS
ATGTGGAAAGCATGCCAACA+TGG 0.655221 4:+39031454 None:intergenic
ATGGCAAGAAACATTGAGAG+AGG 0.662658 4:-39032019 MsG0480020327.01.T01:CDS
AAGAAACATTGAGAGAGGTG+TGG 0.666970 4:-39032014 MsG0480020327.01.T01:CDS
GAACGTGCATTTCACTACCC+CGG 0.677428 4:+39031115 None:intergenic
ACTATACAGATGATAGGACA+TGG 0.695753 4:+39031685 None:intergenic
GAAAGCGTCGAAGAAAGCTG+GGG 0.738416 4:+39031872 None:intergenic
TGGGAAATGAAAATTAACCG+GGG 0.755306 4:-39031132 MsG0480020327.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATATATTCAATAATAA+AGG + Chr4:39035978-39035997 None:intergenic 10.0%
!!! AGTATTCATTTTAAATAAAT+TGG + Chr4:39033003-39033022 None:intergenic 10.0%
!!! TAAAATTTAACTAGTTTAAT+GGG - Chr4:39031843-39031862 MsG0480020327.01.T01:CDS 10.0%
!!! TTAATTTTTTTTGTTTGAAA+TGG + Chr4:39033362-39033381 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + Chr4:39035497-39035516 None:intergenic 100.0%
!! AAATATTGAAGATAAGAAAT+AGG + Chr4:39032517-39032536 None:intergenic 15.0%
!! ATCATATATATACAATATCT+CGG - Chr4:39034449-39034468 MsG0480020327.01.T01:intron 15.0%
!! ATGCATGATAAATATATATA+TGG + Chr4:39033066-39033085 None:intergenic 15.0%
!! ATGTTTGTTTAAATTAAAAC+TGG - Chr4:39031776-39031795 MsG0480020327.01.T01:CDS 15.0%
!! CAAAAAAAATTAAGATTAGT+TGG - Chr4:39033369-39033388 MsG0480020327.01.T01:intron 15.0%
!! CAACTTAATAATTACAATTT+AGG - Chr4:39037156-39037175 MsG0480020327.01.T01:intron 15.0%
!!! AAAATTTAACTAGTTTAATG+GGG - Chr4:39031844-39031863 MsG0480020327.01.T01:CDS 15.0%
!!! AATAATTCTATTTTGTACTT+AGG - Chr4:39034057-39034076 MsG0480020327.01.T01:intron 15.0%
!!! AATTTTAAAGGTATACAATA+TGG + Chr4:39033709-39033728 None:intergenic 15.0%
!!! ATAATTCTATTTTGTACTTA+GGG - Chr4:39034058-39034077 MsG0480020327.01.T01:intron 15.0%
!!! CTAAAATTTAACTAGTTTAA+TGG - Chr4:39031842-39031861 MsG0480020327.01.T01:CDS 15.0%
!!! GTTTTTTGAAAAAATATGAT+GGG - Chr4:39037381-39037400 MsG0480020327.01.T01:CDS 15.0%
!!! TAGAAAATACGAAATTTTAA+AGG + Chr4:39033721-39033740 None:intergenic 15.0%
!!! TCTAGTTAAATTTCTAAAAA+GGG + Chr4:39032062-39032081 None:intergenic 15.0%
!!! TGTTTTTTGAAAAAATATGA+TGG - Chr4:39037380-39037399 MsG0480020327.01.T01:CDS 15.0%
!! AAAATCTATGAAAACTGTAA+CGG - Chr4:39032084-39032103 MsG0480020327.01.T01:intron 20.0%
!! AAAATGAATACTTGTTTATG+TGG - Chr4:39033011-39033030 MsG0480020327.01.T01:intron 20.0%
!! AAACTATTAATGATAGCAAT+TGG + Chr4:39032812-39032831 None:intergenic 20.0%
!! AAATATGATGAATCAAGAAA+AGG + Chr4:39036950-39036969 None:intergenic 20.0%
!! AATATGATGAATCAAGAAAA+GGG + Chr4:39036949-39036968 None:intergenic 20.0%
!! AATTTAGTAAGTTTGCATAT+TGG - Chr4:39034578-39034597 MsG0480020327.01.T01:intron 20.0%
!! ATGACATTTACATTTCAATA+GGG - Chr4:39036477-39036496 MsG0480020327.01.T01:intron 20.0%
!! ATGTAGAATCAAAAGAAAAT+AGG + Chr4:39032460-39032479 None:intergenic 20.0%
!! ATTTCTAAATCTAATTGCAA+TGG - Chr4:39036285-39036304 MsG0480020327.01.T01:intron 20.0%
!! GATTGAAAAAAAGAAAATGA+TGG + Chr4:39033286-39033305 None:intergenic 20.0%
!! GCTAAAACAAATATACATAT+AGG + Chr4:39033832-39033851 None:intergenic 20.0%
!! GTATATCATATAAAAAAGCA+AGG + Chr4:39036727-39036746 None:intergenic 20.0%
!! TAGTTATACATGGATATAAA+TGG + Chr4:39033042-39033061 None:intergenic 20.0%
!! TATATATGGATAGTTATACA+TGG + Chr4:39033052-39033071 None:intergenic 20.0%
!! TATATGATATACATGAAAGT+GGG - Chr4:39036735-39036754 MsG0480020327.01.T01:intron 20.0%
!! TTAATTTCCATGATTACATA+TGG - Chr4:39034280-39034299 MsG0480020327.01.T01:intron 20.0%
!! TTATACATTAGTCAAAAACA+AGG + Chr4:39037024-39037043 None:intergenic 20.0%
!! TTATATGATATACATGAAAG+TGG - Chr4:39036734-39036753 MsG0480020327.01.T01:intron 20.0%
!!! AAAGTTTGATTAGTTTAATG+GGG - Chr4:39034622-39034641 MsG0480020327.01.T01:intron 20.0%
!!! ATAAAGGTAAGTTTTTATAG+AGG + Chr4:39035962-39035981 None:intergenic 20.0%
!!! ATATTGTTATTTAATTGAGC+TGG - Chr4:39031711-39031730 MsG0480020327.01.T01:CDS 20.0%
!!! ATGATGAATATTTCTAAAGT+AGG - Chr4:39032967-39032986 MsG0480020327.01.T01:intron 20.0%
!!! ATGTATAATGTCATATTTTC+AGG - Chr4:39037036-39037055 MsG0480020327.01.T01:intron 20.0%
!!! CAAAGTTTGATTAGTTTAAT+GGG - Chr4:39034621-39034640 MsG0480020327.01.T01:intron 20.0%
!!! CTAGTTAAATTTCTAAAAAG+GGG + Chr4:39032061-39032080 None:intergenic 20.0%
!!! CTAGTTTTAAGTTTTAATGA+TGG - Chr4:39032698-39032717 MsG0480020327.01.T01:intron 20.0%
!!! CTCTAGTTAAATTTCTAAAA+AGG + Chr4:39032063-39032082 None:intergenic 20.0%
!!! GATTTATTTTTGCTAGTTAT+TGG - Chr4:39032923-39032942 MsG0480020327.01.T01:intron 20.0%
!!! TACAAATTTTTGGTTAATAG+TGG - Chr4:39031480-39031499 MsG0480020327.01.T01:intron 20.0%
!!! TAGTTAAATTTCTAAAAAGG+GGG + Chr4:39032060-39032079 None:intergenic 20.0%
!!! TCATCATATTTGGTTTTTTA+TGG - Chr4:39036959-39036978 MsG0480020327.01.T01:intron 20.0%
!!! TGCGATTTAATACAAATTTT+TGG - Chr4:39031470-39031489 MsG0480020327.01.T01:three_prime_UTR 20.0%
!!! TTTTCATTCTAGAACAAATA+AGG + Chr4:39036199-39036218 None:intergenic 20.0%
!!! TTTTCTTGATTCATCATATT+TGG - Chr4:39036949-39036968 MsG0480020327.01.T01:intron 20.0%
!!! TTTTTTTTTGTTTTGTTGCA+GGG - Chr4:39035890-39035909 MsG0480020327.01.T01:intron 20.0%
!!! TTTTTTTTTTGTTTTGTTGC+AGG - Chr4:39035889-39035908 MsG0480020327.01.T01:intron 20.0%
! AAACTAATTCCATAATACCT+AGG - Chr4:39031952-39031971 MsG0480020327.01.T01:CDS 25.0%
! AAATAGTAGATGAAGTTTCT+AGG + Chr4:39032892-39032911 None:intergenic 25.0%
! AAATCACAATCCATACAATA+TGG + Chr4:39033090-39033109 None:intergenic 25.0%
! AACAATTACTTGCAATTTGA+GGG + Chr4:39037265-39037284 None:intergenic 25.0%
! AACATAAAAAGGTGATTTCT+TGG + Chr4:39033947-39033966 None:intergenic 25.0%
! AATTACTTAAAGCCCAATTA+AGG + Chr4:39035806-39035825 None:intergenic 25.0%
! ACTCAATTTGCAGATAATAA+AGG + Chr4:39036427-39036446 None:intergenic 25.0%
! AGTGTTGCATTTATTATCAT+GGG + Chr4:39034360-39034379 None:intergenic 25.0%
! ATCATGGAAATTAACTTCAT+TGG + Chr4:39034274-39034293 None:intergenic 25.0%
! ATTACTTAAAGCCCAATTAA+GGG + Chr4:39035805-39035824 None:intergenic 25.0%
! CAAATTGAGTCTAATCTATT+TGG - Chr4:39036437-39036456 MsG0480020327.01.T01:intron 25.0%
! CAAGAATGAAATTGAATTTC+TGG - Chr4:39033799-39033818 MsG0480020327.01.T01:intron 25.0%
! CACATGTTTGATGAATAAAA+TGG + Chr4:39033329-39033348 None:intergenic 25.0%
! CCATTAAACTAATCAAACTT+TGG + Chr4:39034623-39034642 None:intergenic 25.0%
! CTTCAATATTTGCTTAAATC+TGG - Chr4:39032526-39032545 MsG0480020327.01.T01:intron 25.0%
! GATGACATTTACATTTCAAT+AGG - Chr4:39036476-39036495 MsG0480020327.01.T01:intron 25.0%
! GATTTCTCTCATTTGTTTAA+GGG - Chr4:39033404-39033423 MsG0480020327.01.T01:intron 25.0%
! TAACAATCCTAACTAAAAAC+TGG - Chr4:39035299-39035318 MsG0480020327.01.T01:intron 25.0%
! TAAGCATGAAATGAAATGAT+TGG - Chr4:39031410-39031429 MsG0480020327.01.T01:three_prime_UTR 25.0%
! TAATTATGCATCACATTATC+TGG + Chr4:39036243-39036262 None:intergenic 25.0%
! TATAACAGGCATAACATATA+AGG + Chr4:39034884-39034903 None:intergenic 25.0%
! TGATAACTGTTTACACAAAA+AGG - Chr4:39032011-39032030 MsG0480020327.01.T01:CDS 25.0%
! TGATTTCTCTCATTTGTTTA+AGG - Chr4:39033403-39033422 MsG0480020327.01.T01:intron 25.0%
! TGCAATCAAAGAAACAAAAT+AGG + Chr4:39032400-39032419 None:intergenic 25.0%
! TGTATCTAACTTAAATGACT+AGG + Chr4:39034842-39034861 None:intergenic 25.0%
! TTAAATGACTAGGTACAATT+AGG + Chr4:39034832-39034851 None:intergenic 25.0%
! TTGAAGAAATGGTTATGAAT+TGG + Chr4:39034756-39034775 None:intergenic 25.0%
! TTGTGTAAACAGTTATCAAT+TGG + Chr4:39032009-39032028 None:intergenic 25.0%
!! AAGAAAAAGCATGAAAATTG+TGG + Chr4:39035327-39035346 None:intergenic 25.0%
!! AAGTGTTGCATTTATTATCA+TGG + Chr4:39034361-39034380 None:intergenic 25.0%
!! AGTTAAATTTCTAAAAAGGG+GGG + Chr4:39032059-39032078 None:intergenic 25.0%
!! ATATGCGATAATGCATTTTA+AGG + Chr4:39037318-39037337 None:intergenic 25.0%
!! ATTTTCTCCATATGTAATCA+TGG + Chr4:39034290-39034309 None:intergenic 25.0%
!! CATTTCTTCAAAAGTAGTTT+TGG - Chr4:39034765-39034784 MsG0480020327.01.T01:intron 25.0%
!! TATGCGATAATGCATTTTAA+GGG + Chr4:39037317-39037336 None:intergenic 25.0%
!! TTAGTTTAATGGGGAAATTT+TGG - Chr4:39034631-39034650 MsG0480020327.01.T01:intron 25.0%
!! TTCAATTCGTTGTGATTTTA+GGG - Chr4:39033470-39033489 MsG0480020327.01.T01:intron 25.0%
!! TTTTATACTCGTGTGATATA+TGG - Chr4:39032372-39032391 MsG0480020327.01.T01:intron 25.0%
!!! ATCTACTATTTTCTAGCTAT+GGG - Chr4:39032901-39032920 MsG0480020327.01.T01:intron 25.0%
!!! ATTTTGGAATTTGAATGATG+TGG - Chr4:39035663-39035682 MsG0480020327.01.T01:intron 25.0%
!!! ATTTTGTTTCTTTGATTGCA+TGG - Chr4:39032400-39032419 MsG0480020327.01.T01:intron 25.0%
!!! CAAAACTACTTTTGAAGAAA+TGG + Chr4:39034767-39034786 None:intergenic 25.0%
!!! CCAAAGTTTGATTAGTTTAA+TGG - Chr4:39034620-39034639 MsG0480020327.01.T01:intron 25.0%
!!! GCTGTGATTAAAATTGATTT+TGG - Chr4:39035647-39035666 MsG0480020327.01.T01:intron 25.0%
!!! TTTAGAACTTTTGTGTGATT+GGG - Chr4:39034511-39034530 MsG0480020327.01.T01:intron 25.0%
!!! TTTTGGAATTTGAATGATGT+GGG - Chr4:39035664-39035683 MsG0480020327.01.T01:intron 25.0%
AAAATACAGAGAAGAGATAG+AGG + Chr4:39034006-39034025 None:intergenic 30.0%
AAACAAAATTTCGTGCAAGA+TGG + Chr4:39036166-39036185 None:intergenic 30.0%
AAAGTAGTTCCTTGTAATAG+TGG + Chr4:39035214-39035233 None:intergenic 30.0%
AAATTCTACCAAAGGACATT+TGG - Chr4:39031143-39031162 MsG0480020327.01.T01:three_prime_UTR 30.0%
AATTGCACTATACAGATGAT+AGG + Chr4:39036856-39036875 None:intergenic 30.0%
AATTGCTTCTCAAATTCGTA+AGG + Chr4:39035723-39035742 None:intergenic 30.0%
ACAATTACTTGCAATTTGAG+GGG + Chr4:39037264-39037283 None:intergenic 30.0%
ACACTGATGAATCATGTTTA+AGG - Chr4:39033518-39033537 MsG0480020327.01.T01:intron 30.0%
ACTGATGAATCATGTTTAAG+GGG - Chr4:39033520-39033539 MsG0480020327.01.T01:intron 30.0%
AGCTTATTCTCCAAATTCTT+AGG + Chr4:39031177-39031196 None:intergenic 30.0%
AGGATAAACAGCAACTTAAA+TGG + Chr4:39035838-39035857 None:intergenic 30.0%
AGTACGCTCAACATAATAAT+CGG + Chr4:39036032-39036051 None:intergenic 30.0%
AGTGGAAAAACTAGTAAAAG+TGG + Chr4:39033187-39033206 None:intergenic 30.0%
ATAAAAAGGAAGAAGAGGAT+GGG - Chr4:39032426-39032445 MsG0480020327.01.T01:intron 30.0%
ATAAAAAGGTGATTTCTTGG+AGG + Chr4:39033944-39033963 None:intergenic 30.0%
ATACATGGATATAAATGGAG+AGG + Chr4:39033037-39033056 None:intergenic 30.0%
ATCATGCATTCCATATTGTA+TGG - Chr4:39033077-39033096 MsG0480020327.01.T01:intron 30.0%
ATCGTTATTCTGAACAGAAT+GGG - Chr4:39032119-39032138 MsG0480020327.01.T01:intron 30.0%
ATGCAAATTACTTAAGCTGA+TGG - Chr4:39035236-39035255 MsG0480020327.01.T01:intron 30.0%
ATGGGAAATGAAAATTAACC+GGG - Chr4:39037399-39037418 MsG0480020327.01.T01:CDS 30.0%
ATTATAAGTCCTTGCAAAAC+TGG - Chr4:39034903-39034922 MsG0480020327.01.T01:intron 30.0%
ATTGCTTCTCAAATTCGTAA+GGG + Chr4:39035722-39035741 None:intergenic 30.0%
CAACAATTACTTGCAATTTG+AGG + Chr4:39037266-39037285 None:intergenic 30.0%
CACTGATGAATCATGTTTAA+GGG - Chr4:39033519-39033538 MsG0480020327.01.T01:intron 30.0%
CATTAAGCTGTAACATTTCT+TGG + Chr4:39033766-39033785 None:intergenic 30.0%
CCAGGAAAACTAAATAACAA+CGG + Chr4:39034491-39034510 None:intergenic 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + Chr4:39034950-39034969 None:intergenic 30.0%
GATGGGAAATGAAAATTAAC+CGG - Chr4:39037398-39037417 MsG0480020327.01.T01:CDS 30.0%
GCAAGGACTTATAATATAAC+AGG + Chr4:39034898-39034917 None:intergenic 30.0%
GGATAAACAGCAACTTAAAT+GGG + Chr4:39035837-39035856 None:intergenic 30.0%
GGTTACTTAATTCTGCATAT+TGG - Chr4:39031797-39031816 MsG0480020327.01.T01:CDS 30.0%
GTTATGAATTGGATATGCTT+AGG + Chr4:39034745-39034764 None:intergenic 30.0%
TAAAAAGGTGATTTCTTGGA+GGG + Chr4:39033943-39033962 None:intergenic 30.0%
TATAAGGAAAAGATGTCCAA+CGG + Chr4:39034868-39034887 None:intergenic 30.0%
TCAAAATTCCATTGTACCTA+GGG - Chr4:39034693-39034712 MsG0480020327.01.T01:intron 30.0%
TCAATTTGCAATAGAATTGC+TGG - Chr4:39036681-39036700 MsG0480020327.01.T01:intron 30.0%
TCTCTATGATCTATCTGAAT+AGG + Chr4:39035378-39035397 None:intergenic 30.0%
TGAAAATTCTGCCTTAATTG+CGG + Chr4:39035089-39035108 None:intergenic 30.0%
TTCAAAATTCCATTGTACCT+AGG - Chr4:39034692-39034711 MsG0480020327.01.T01:intron 30.0%
TTCTGTATGAAGCTAAGATA+TGG - Chr4:39035614-39035633 MsG0480020327.01.T01:intron 30.0%
TTGATGAATAGAATACGAAC+TGG + Chr4:39036791-39036810 None:intergenic 30.0%
! CTAGATATCTGAGATATACA+CGG + Chr4:39035350-39035369 None:intergenic 30.0%
! CTTCAATTCGTTGTGATTTT+AGG - Chr4:39033469-39033488 MsG0480020327.01.T01:intron 30.0%
! TCTTTTACATCAGAGATATC+AGG - Chr4:39036314-39036333 MsG0480020327.01.T01:intron 30.0%
! TTCACAACATTTTTGCACAT+AGG + Chr4:39034404-39034423 None:intergenic 30.0%
! TTTGAAGTAACTGTTAGTAG+TGG - Chr4:39034023-39034042 MsG0480020327.01.T01:intron 30.0%
! TTTTTACTACTCTGTGTTGT+GGG - Chr4:39033576-39033595 MsG0480020327.01.T01:intron 30.0%
!! ATTTAAGTTGCTGTTTATCC+TGG - Chr4:39035837-39035856 MsG0480020327.01.T01:intron 30.0%
!! GAAGTTGATATAAGACTAAG+AGG - Chr4:39034421-39034440 MsG0480020327.01.T01:intron 30.0%
!! GTTTAGAACTTTTGTGTGAT+TGG - Chr4:39034510-39034529 MsG0480020327.01.T01:intron 30.0%
!! TGATTGCATGGTTGATAAAA+AGG - Chr4:39032412-39032431 MsG0480020327.01.T01:intron 30.0%
!! TTTAAGTTGCTGTTTATCCT+GGG - Chr4:39035838-39035857 MsG0480020327.01.T01:intron 30.0%
!!! AGTTTTGGCTGAACATAAAA+AGG + Chr4:39033958-39033977 None:intergenic 30.0%
!!! CATCTACTATTTTCTAGCTA+TGG - Chr4:39032900-39032919 MsG0480020327.01.T01:intron 30.0%
!!! CTTTTAACTTTTGGGTGATT+GGG - Chr4:39031734-39031753 MsG0480020327.01.T01:CDS 30.0%
!!! TTCAAAAGTAGTTTTGGACA+TGG - Chr4:39034771-39034790 MsG0480020327.01.T01:intron 30.0%
AAAACCACATGCATCATGAA+TGG - Chr4:39032555-39032574 MsG0480020327.01.T01:intron 35.0%
AAACCTAAAGCATAGTGACA+CGG + Chr4:39036088-39036107 None:intergenic 35.0%
AAACTCAATCACGAAAACCT+AGG + Chr4:39031972-39031991 None:intergenic 35.0%
AATCATGTTTAAGGGGTTCA+CGG - Chr4:39033527-39033546 MsG0480020327.01.T01:intron 35.0%
AATGAACTCCTAATGACATG+TGG + Chr4:39037098-39037117 None:intergenic 35.0%
AATTACTTGCAATTTGAGGG+GGG + Chr4:39037262-39037281 None:intergenic 35.0%
AATTTGGAGAATAAGCTTGC+TGG - Chr4:39031180-39031199 MsG0480020327.01.T01:three_prime_UTR 35.0%
ACAGCCATCAGATTAAATCA+AGG - Chr4:39033153-39033172 MsG0480020327.01.T01:intron 35.0%
ACAGTGATACAGTAATTGGT+AGG - Chr4:39035769-39035788 MsG0480020327.01.T01:intron 35.0%
ACATATTAAAAACACAGCCC+AGG + Chr4:39035858-39035877 None:intergenic 35.0%
ACCAAAAAATCATGTCTGAG+AGG + Chr4:39035581-39035600 None:intergenic 35.0%
ACTATACAGATGATAGGACA+TGG + Chr4:39036850-39036869 None:intergenic 35.0%
AGACAGTTGATTGGATCTAA+TGG - Chr4:39033628-39033647 MsG0480020327.01.T01:intron 35.0%
AGTGAATCTAGACAGTTGAT+TGG - Chr4:39033619-39033638 MsG0480020327.01.T01:intron 35.0%
ATAGGTAGTAAAGAGGGAAA+AGG + Chr4:39034386-39034405 None:intergenic 35.0%
ATTGGGCAAATTTAGTGCAT+AGG - Chr4:39031751-39031770 MsG0480020327.01.T01:CDS 35.0%
CAATTACTTGCAATTTGAGG+GGG + Chr4:39037263-39037282 None:intergenic 35.0%
CACAACACAGAGTAGTAAAA+AGG + Chr4:39033577-39033596 None:intergenic 35.0%
CAGCCATCAGATTAAATCAA+GGG - Chr4:39033154-39033173 MsG0480020327.01.T01:intron 35.0%
CTACCCTTGATTTAATCTGA+TGG + Chr4:39033160-39033179 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + Chr4:39034947-39034966 None:intergenic 35.0%
GATAAAAAGGAAGAAGAGGA+TGG - Chr4:39032425-39032444 MsG0480020327.01.T01:intron 35.0%
GATCGTTATTCTGAACAGAA+TGG - Chr4:39032118-39032137 MsG0480020327.01.T01:intron 35.0%
GGATGGTTTACCTAAGAATT+TGG - Chr4:39031164-39031183 MsG0480020327.01.T01:three_prime_UTR 35.0%
GGTTACAGTGATACAGTAAT+TGG - Chr4:39035765-39035784 MsG0480020327.01.T01:intron 35.0%
GTTGAAGACAACCCTTAATT+GGG - Chr4:39035791-39035810 MsG0480020327.01.T01:intron 35.0%
TAAACCATCCAAATGTCCTT+TGG + Chr4:39031154-39031173 None:intergenic 35.0%
TACTCTAAGCCACTATTACA+AGG - Chr4:39035202-39035221 MsG0480020327.01.T01:intron 35.0%
TAGAATACGAACTGGTAGAA+TGG + Chr4:39036783-39036802 None:intergenic 35.0%
TCACGAAAACCTAGGTATTA+TGG + Chr4:39031964-39031983 None:intergenic 35.0%
TGCTAACGTGTTCAATTCTT+TGG - Chr4:39031206-39031225 MsG0480020327.01.T01:three_prime_UTR 35.0%
TGGGAAATGAAAATTAACCG+GGG - Chr4:39037400-39037419 MsG0480020327.01.T01:CDS 35.0%
TGGTACTAGAATGTATGTCA+AGG + Chr4:39036146-39036165 None:intergenic 35.0%
TGTATGAAGCTAAGATATGG+AGG - Chr4:39035617-39035636 MsG0480020327.01.T01:intron 35.0%
TGTGCATGTTATTCTTTCAG+CGG - Chr4:39031116-39031135 MsG0480020327.01.T01:three_prime_UTR 35.0%
TTCAGATGGAAAACAGATGT+AGG + Chr4:39037212-39037231 None:intergenic 35.0%
TTGCACATAGGTAGTAAAGA+GGG + Chr4:39034392-39034411 None:intergenic 35.0%
TTGGGCAAATTTAGTGCATA+GGG - Chr4:39031752-39031771 MsG0480020327.01.T01:CDS 35.0%
TTTGCACATAGGTAGTAAAG+AGG + Chr4:39034393-39034412 None:intergenic 35.0%
! AGGTCTGTTCAAGTTAAAAC+TGG - Chr4:39034553-39034572 MsG0480020327.01.T01:intron 35.0%
! AGTAGATGAAGTTTCTAGGA+AGG + Chr4:39032888-39032907 None:intergenic 35.0%
! CTTTTTACTACTCTGTGTTG+TGG - Chr4:39033575-39033594 MsG0480020327.01.T01:intron 35.0%
! GATATACATGAAAGTGGGTT+TGG - Chr4:39036740-39036759 MsG0480020327.01.T01:intron 35.0%
! GTAGATGAAGTTTCTAGGAA+GGG + Chr4:39032887-39032906 None:intergenic 35.0%
! TCACTATGCTTTAGGTTTAG+CGG - Chr4:39036090-39036109 MsG0480020327.01.T01:intron 35.0%
! TCTTGGAGGGCTTAATTTTA+AGG + Chr4:39033930-39033949 None:intergenic 35.0%
!! AAGTTTTTCAGCACAGTATG+TGG + Chr4:39032597-39032616 None:intergenic 35.0%
!! AGGGCTTAATTTTAAGGAAG+TGG + Chr4:39033924-39033943 None:intergenic 35.0%
!! AGTTCTGAACTGTCAACTTT+AGG - Chr4:39035459-39035478 MsG0480020327.01.T01:intron 35.0%
!! ATGGATTAGCTACAAGTCTA+AGG + Chr4:39033267-39033286 None:intergenic 35.0%
!! ATTCGTTGTGATTTTAGGGA+TGG - Chr4:39033474-39033493 MsG0480020327.01.T01:intron 35.0%
!! CGATTGAGTTTTGACAATAC+TGG - Chr4:39031567-39031586 MsG0480020327.01.T01:intron 35.0%
!! CTGTTTTCCATCTGAAACTT+CGG - Chr4:39037216-39037235 MsG0480020327.01.T01:intron 35.0%
!! CTTAATTTTAAGGAAGTGGG+TGG + Chr4:39033920-39033939 None:intergenic 35.0%
!! CTTGTTTTCTTCAACCATGT+TGG - Chr4:39037064-39037083 MsG0480020327.01.T01:intron 35.0%
!! GGGCTTAATTTTAAGGAAGT+GGG + Chr4:39033923-39033942 None:intergenic 35.0%
!! GGTTGATAAAAAGGAAGAAG+AGG - Chr4:39032421-39032440 MsG0480020327.01.T01:intron 35.0%
!! GTTGTTTTGTTGTGTACTAC+TGG - Chr4:39031335-39031354 MsG0480020327.01.T01:three_prime_UTR 35.0%
!! TCACACAAAAGTTCTAAACC+AGG + Chr4:39034509-39034528 None:intergenic 35.0%
!! TCTATTTGGCTTTCTTAACG+TGG - Chr4:39036451-39036470 MsG0480020327.01.T01:intron 35.0%
!! TGGATTAGCTACAAGTCTAA+GGG + Chr4:39033266-39033285 None:intergenic 35.0%
!! TGGATTTTTGAGGGTTTAGT+AGG + Chr4:39033900-39033919 None:intergenic 35.0%
!! TTCGTTGTGATTTTAGGGAT+GGG - Chr4:39033475-39033494 MsG0480020327.01.T01:intron 35.0%
!!! ACCTCTCAGACATGATTTTT+TGG - Chr4:39035577-39035596 MsG0480020327.01.T01:intron 35.0%
!!! ACTGTGACTGTGTCATTTTT+TGG - Chr4:39033665-39033684 MsG0480020327.01.T01:intron 35.0%
!!! ATGGGGAAATTTTGGCTTAA+TGG - Chr4:39034639-39034658 MsG0480020327.01.T01:intron 35.0%
!!! ATTGGGCAAGTTTTGAGTAT+GGG - Chr4:39034528-39034547 MsG0480020327.01.T01:intron 35.0%
!!! CCGTTGTTATTTAGTTTTCC+TGG - Chr4:39034488-39034507 MsG0480020327.01.T01:intron 35.0%
!!! GCTTTTAACTTTTGGGTGAT+TGG - Chr4:39031733-39031752 MsG0480020327.01.T01:CDS 35.0%
!!! GGGCTTTAAGTAATTTTACC+CGG - Chr4:39035811-39035830 MsG0480020327.01.T01:intron 35.0%
!!! TGAGCTGGCTTTTAACTTTT+GGG - Chr4:39031726-39031745 MsG0480020327.01.T01:CDS 35.0%
!!! TGGGGAAATTTTGGCTTAAT+GGG - Chr4:39034640-39034659 MsG0480020327.01.T01:intron 35.0%
!!! TGTCACTTTTATGCTCTTGT+AGG - Chr4:39032335-39032354 MsG0480020327.01.T01:intron 35.0%
!!! TGTGGTTCCAGTTTTTAGTT+AGG + Chr4:39035309-39035328 None:intergenic 35.0%
!!! TTGAGCTGGCTTTTAACTTT+TGG - Chr4:39031725-39031744 MsG0480020327.01.T01:CDS 35.0%
!!! TTGTCTCACTGGTTTTACTT+GGG + Chr4:39036593-39036612 None:intergenic 35.0%
!!! TTTGTCTCACTGGTTTTACT+TGG + Chr4:39036594-39036613 None:intergenic 35.0%
AAAACTCAATCGCAGATCAC+GGG + Chr4:39031559-39031578 None:intergenic 40.0%
AAACAGCAACTTAAATGGGC+CGG + Chr4:39035833-39035852 None:intergenic 40.0%
AAATCTCAACAGCAAGTAGG+TGG + Chr4:39036818-39036837 None:intergenic 40.0%
AACAAGCATACAACCCAACA+TGG + Chr4:39032732-39032751 None:intergenic 40.0%
AACCAAGAGTCCAATGCTAT+TGG - Chr4:39036395-39036414 MsG0480020327.01.T01:intron 40.0%
AAGAAACATTGAGAGAGGTG+TGG - Chr4:39036518-39036537 MsG0480020327.01.T01:intron 40.0%
AAGGAACTCACCAATAGCAT+TGG + Chr4:39036408-39036427 None:intergenic 40.0%
ACAGGAAGATGAGGAGATAA+TGG + Chr4:39036633-39036652 None:intergenic 40.0%
ACAGTGAAATCATGGAAACG+TGG + Chr4:39034333-39034352 None:intergenic 40.0%
AGAAGAGATAGAGGACAATG+AGG + Chr4:39033997-39034016 None:intergenic 40.0%
ATCTGATAGCAGGGAAAAAG+AGG - Chr4:39034100-39034119 MsG0480020327.01.T01:intron 40.0%
ATGCATCATGAATGGAGCTT+AGG - Chr4:39032563-39032582 MsG0480020327.01.T01:intron 40.0%
ATGGCAAGAAACATTGAGAG+AGG - Chr4:39036513-39036532 MsG0480020327.01.T01:intron 40.0%
ATTACTTGCAATTTGAGGGG+GGG + Chr4:39037261-39037280 None:intergenic 40.0%
CAAAACTCAATCGCAGATCA+CGG + Chr4:39031560-39031579 None:intergenic 40.0%
CAAATTCGTAAGGGCAACAT+AGG + Chr4:39035713-39035732 None:intergenic 40.0%
CACTCACAACATGTCAAAGA+AGG + Chr4:39036121-39036140 None:intergenic 40.0%
CAGAAATCTCAACAGCAAGT+AGG + Chr4:39036821-39036840 None:intergenic 40.0%
CAGGAAGATGAGGAGATAAT+GGG + Chr4:39036632-39036651 None:intergenic 40.0%
CAGTGAAATCATGGAAACGT+GGG + Chr4:39034332-39034351 None:intergenic 40.0%
CATGCTTTCCACATGTCATT+AGG - Chr4:39037087-39037106 MsG0480020327.01.T01:intron 40.0%
CCAGAACAGAGTAGTGAAAA+GGG - Chr4:39033212-39033231 MsG0480020327.01.T01:intron 40.0%
CCAGGTAGTAAATCAGTCAA+AGG + Chr4:39031611-39031630 None:intergenic 40.0%
CTAACCAAAGGTCGCAATTT+AGG - Chr4:39035049-39035068 MsG0480020327.01.T01:intron 40.0%
CTAGTTTAATGGGGAAGCTT+CGG - Chr4:39031853-39031872 MsG0480020327.01.T01:CDS 40.0%
CTCAGAATCAAACACTGTTC+AGG + Chr4:39036917-39036936 None:intergenic 40.0%
CTGAACAGTGTTTGATTCTG+AGG - Chr4:39036915-39036934 MsG0480020327.01.T01:intron 40.0%
CTGGAACAATGCATTTGTTC+AGG + Chr4:39036224-39036243 None:intergenic 40.0%
GAACTGGTAGAATGGATCAA+AGG + Chr4:39036775-39036794 None:intergenic 40.0%
GACCTGCTGTGTTGAAATTT+GGG + Chr4:39033444-39033463 None:intergenic 40.0%
GAGTACTATCTATCCGATGT+GGG - Chr4:39034969-39034988 MsG0480020327.01.T01:intron 40.0%
GCGGATGAAAATTCTACCAA+AGG - Chr4:39031135-39031154 MsG0480020327.01.T01:three_prime_UTR 40.0%
GCTAATGCATGATGCTTACT+AGG - Chr4:39035128-39035147 MsG0480020327.01.T01:intron 40.0%
GGTTGAAGACAACCCTTAAT+TGG - Chr4:39035790-39035809 MsG0480020327.01.T01:intron 40.0%
GTTCAGAATAACGATCAAGC+AGG + Chr4:39032114-39032133 None:intergenic 40.0%
GTTCTGTAGTGTTTAGCAGA+GGG - Chr4:39034188-39034207 MsG0480020327.01.T01:intron 40.0%
TAAAGCATAGTGACACGGTT+CGG + Chr4:39036083-39036102 None:intergenic 40.0%
TAAGTTAGATACACCTCCGT+TGG - Chr4:39034849-39034868 MsG0480020327.01.T01:intron 40.0%
TACATCACCGAAGTTTCAGA+TGG + Chr4:39037226-39037245 None:intergenic 40.0%
TACCTGGCTGCAAAAATGTT+TGG - Chr4:39031624-39031643 MsG0480020327.01.T01:three_prime_UTR 40.0%
TCTACCAAAGGACATTTGGA+TGG - Chr4:39031147-39031166 MsG0480020327.01.T01:three_prime_UTR 40.0%
TGACCTGCTGTGTTGAAATT+TGG + Chr4:39033445-39033464 None:intergenic 40.0%
TGGCTTAATGGGAGATTCAT+CGG - Chr4:39034651-39034670 MsG0480020327.01.T01:intron 40.0%
TGGGCAAATTTAGTGCATAG+GGG - Chr4:39031753-39031772 MsG0480020327.01.T01:CDS 40.0%
TGGGCATAACAGTGAAATCA+TGG + Chr4:39034341-39034360 None:intergenic 40.0%
TGTACTTAGGGAAGTTGTGA+TGG - Chr4:39034070-39034089 MsG0480020327.01.T01:intron 40.0%
TGTGCACACAACTAGTTAGA+AGG + Chr4:39034809-39034828 None:intergenic 40.0%
TGTTCTGTAGTGTTTAGCAG+AGG - Chr4:39034187-39034206 MsG0480020327.01.T01:intron 40.0%
! AACCATAGCCTTGCAAAATG+AGG + Chr4:39032280-39032299 None:intergenic 40.0%
! AGAAACATTGAGAGAGGTGT+GGG - Chr4:39036519-39036538 MsG0480020327.01.T01:intron 40.0%
! AGAGTACTATCTATCCGATG+TGG - Chr4:39034968-39034987 MsG0480020327.01.T01:intron 40.0%
! CCTTTGACTGATTTACTACC+TGG - Chr4:39031608-39031627 MsG0480020327.01.T01:intron 40.0%
! CCTTTTCACTACTCTGTTCT+GGG + Chr4:39033214-39033233 None:intergenic 40.0%
! TACATGAAAGTGGGTTTGGT+TGG - Chr4:39036744-39036763 MsG0480020327.01.T01:intron 40.0%
! TTCCAAACATTTTTGCAGCC+AGG + Chr4:39031629-39031648 None:intergenic 40.0%
! TTCCTCATTTTGCAAGGCTA+TGG - Chr4:39032275-39032294 MsG0480020327.01.T01:intron 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + Chr4:39035007-39035026 None:intergenic 40.0%
!! TGAAAGTGACACTGTTTCTG+CGG - Chr4:39035744-39035763 MsG0480020327.01.T01:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + Chr4:39035006-39035025 None:intergenic 40.0%
!!! AGTAGTTTTGGACATGGATG+TGG - Chr4:39034777-39034796 MsG0480020327.01.T01:intron 40.0%
!!! CACTGTTTTAACCGAATTCG+CGG + Chr4:39035532-39035551 None:intergenic 40.0%
!!! GATTGGGCAAGTTTTGAGTA+TGG - Chr4:39034527-39034546 MsG0480020327.01.T01:intron 40.0%
!!! GTAGTTTTGGACATGGATGT+GGG - Chr4:39034778-39034797 MsG0480020327.01.T01:intron 40.0%
AACAGCAACTTAAATGGGCC+GGG + Chr4:39035832-39035851 None:intergenic 45.0%
AACATCACAGCTAGCAGAAC+TGG + Chr4:39032844-39032863 None:intergenic 45.0%
AAGGAAAAGATGTCCAACGG+AGG + Chr4:39034865-39034884 None:intergenic 45.0%
ACAAACAGCCCTAGGTACAA+TGG + Chr4:39034704-39034723 None:intergenic 45.0%
ACAGATGATAGGACATGGCT+AGG + Chr4:39036845-39036864 None:intergenic 45.0%
ACTACTCTGTGTTGTGGGTT+AGG - Chr4:39033581-39033600 MsG0480020327.01.T01:intron 45.0%
ACTTGATCACAAACAGCCCT+AGG + Chr4:39034712-39034731 None:intergenic 45.0%
AGAGATAGAGGACAATGAGG+AGG + Chr4:39033994-39034013 None:intergenic 45.0%
AGCCTTGCAAAATGAGGAAC+AGG + Chr4:39032274-39032293 None:intergenic 45.0%
AGCTCCATTCATGATGCATG+TGG + Chr4:39032562-39032581 None:intergenic 45.0%
AGGAAGAAGAGGATGGGATT+CGG - Chr4:39032432-39032451 MsG0480020327.01.T01:intron 45.0%
AGGTCGCAATTTAGGTGACT+AGG - Chr4:39035057-39035076 MsG0480020327.01.T01:intron 45.0%
AGTCGTTTGAGAGGAAGTTG+GGG - Chr4:39034128-39034147 MsG0480020327.01.T01:intron 45.0%
ATAGGGACTCAACACTCTGA+TGG - Chr4:39036494-39036513 MsG0480020327.01.T01:intron 45.0%
ATGAGGAACAGGAGAAACAG+AGG + Chr4:39032263-39032282 None:intergenic 45.0%
CACCCAAATTTCAACACAGC+AGG - Chr4:39033439-39033458 MsG0480020327.01.T01:intron 45.0%
CAGATGATAGGACATGGCTA+GGG + Chr4:39036844-39036863 None:intergenic 45.0%
CAGTCGTTTGAGAGGAAGTT+GGG - Chr4:39034127-39034146 MsG0480020327.01.T01:intron 45.0%
CATCAGAGATATCAGGCTCT+TGG - Chr4:39036321-39036340 MsG0480020327.01.T01:intron 45.0%
CCCAGAACAGAGTAGTGAAA+AGG - Chr4:39033211-39033230 MsG0480020327.01.T01:intron 45.0%
CCTCAAAGCCAACACAATGA+AGG - Chr4:39035005-39035024 MsG0480020327.01.T01:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + Chr4:39035016-39035035 None:intergenic 45.0%
CTGCAATGAAGGCTAACCAA+AGG - Chr4:39035037-39035056 MsG0480020327.01.T01:intron 45.0%
CTGTGTGTATGCACTACAGT+GGG - Chr4:39032752-39032771 MsG0480020327.01.T01:intron 45.0%
GATGGATGCCTTTCCATGTT+GGG - Chr4:39032716-39032735 MsG0480020327.01.T01:intron 45.0%
GCATACAACCCAACATGGAA+AGG + Chr4:39032727-39032746 None:intergenic 45.0%
GGAGAGTCATGGGAAAACAT+TGG - Chr4:39031883-39031902 MsG0480020327.01.T01:CDS 45.0%
GGCTGATAAACAGGAAGATG+AGG + Chr4:39036642-39036661 None:intergenic 45.0%
GGTCGCAATTTAGGTGACTA+GGG - Chr4:39035058-39035077 MsG0480020327.01.T01:intron 45.0%
GGTGTCTACATCTGATAGCA+GGG - Chr4:39034091-39034110 MsG0480020327.01.T01:intron 45.0%
GTCACCTAAATTGCGACCTT+TGG + Chr4:39035056-39035075 None:intergenic 45.0%
GTCAGACTGTCTGCTGTTAT+TGG - Chr4:39032775-39032794 MsG0480020327.01.T01:intron 45.0%
GTCGCAATTTAGGTGACTAG+GGG - Chr4:39035059-39035078 MsG0480020327.01.T01:intron 45.0%
TAACGAACGAGGATGAACAG+TGG + Chr4:39033241-39033260 None:intergenic 45.0%
TCGCAGATCACGGGAAATAA+CGG + Chr4:39031550-39031569 None:intergenic 45.0%
TCTGTGTGTATGCACTACAG+TGG - Chr4:39032751-39032770 MsG0480020327.01.T01:intron 45.0%
TGGTGTCTACATCTGATAGC+AGG - Chr4:39034090-39034109 MsG0480020327.01.T01:intron 45.0%
TGTGTGTATGCACTACAGTG+GGG - Chr4:39032753-39032772 MsG0480020327.01.T01:intron 45.0%
TTGAGGGTTTAGTAGGCTGT+AGG + Chr4:39033893-39033912 None:intergenic 45.0%
! ACACGGTTCGGAATTTGCTT+CGG + Chr4:39036071-39036090 None:intergenic 45.0%
! AGCCAACACAATGAAGGTGT+TGG - Chr4:39035011-39035030 MsG0480020327.01.T01:intron 45.0%
! ATGTGGAAAGCATGCCAACA+TGG + Chr4:39037081-39037100 None:intergenic 45.0%
! CACCAATAGCATTGGACTCT+TGG + Chr4:39036400-39036419 None:intergenic 45.0%
! CCCTTTTCACTACTCTGTTC+TGG + Chr4:39033215-39033234 None:intergenic 45.0%
! CCTTACAAGCCAGTTTTGCA+AGG + Chr4:39034915-39034934 None:intergenic 45.0%
! CTCCTGTTCCTCATTTTGCA+AGG - Chr4:39032269-39032288 MsG0480020327.01.T01:intron 45.0%
! GAACCGTGTCACTATGCTTT+AGG - Chr4:39036082-39036101 MsG0480020327.01.T01:intron 45.0%
! GATGGGTGGCTAATGTTTTG+TGG - Chr4:39033492-39033511 MsG0480020327.01.T01:intron 45.0%
! GGAGGAAGTGGAACAAGTTT+TGG + Chr4:39033973-39033992 None:intergenic 45.0%
! TACTCTGTTCTGGGCTTAAG+TGG + Chr4:39033205-39033224 None:intergenic 45.0%
! TCGGAATTTGCTTCGGTATG+TGG + Chr4:39036064-39036083 None:intergenic 45.0%
! TGATGGATGCCTTTCCATGT+TGG - Chr4:39032715-39032734 MsG0480020327.01.T01:intron 45.0%
! TTCTAAAAAGGGGGGAGACA+TGG + Chr4:39032051-39032070 None:intergenic 45.0%
! TTTTGGACATGGATGTGGGT+TGG - Chr4:39034782-39034801 MsG0480020327.01.T01:intron 45.0%
!! AGGAAGTGGGTGGATTTTTG+AGG + Chr4:39033910-39033929 None:intergenic 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG - Chr4:39034917-39034936 MsG0480020327.01.T01:intron 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - Chr4:39035014-39035033 MsG0480020327.01.T01:intron 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + Chr4:39035008-39035027 None:intergenic 45.0%
!! CCTTGCAAAACTGGCTTGTA+AGG - Chr4:39034912-39034931 MsG0480020327.01.T01:intron 45.0%
!! GGAAGTGGGTGGATTTTTGA+GGG + Chr4:39033909-39033928 None:intergenic 45.0%
!! GTTGTGATTTTAGGGATGGG+TGG - Chr4:39033478-39033497 MsG0480020327.01.T01:intron 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + Chr4:39035005-39035024 None:intergenic 45.0%
!! TGAAAGCGTCGAAGAAAGCT+GGG + Chr4:39036664-39036683 None:intergenic 45.0%
!! TTGAAAGCGTCGAAGAAAGC+TGG + Chr4:39036665-39036684 None:intergenic 45.0%
!!! GCAAGTTTTGAGTATGGGTG+AGG - Chr4:39034533-39034552 MsG0480020327.01.T01:intron 45.0%
!!! GTCATCTGCTGCTTGTTTTG+TGG - Chr4:39032664-39032683 MsG0480020327.01.T01:intron 45.0%
AAAGCAAGGTGACAGCAGCT+AGG + Chr4:39036713-39036732 None:intergenic 50.0%
AACCGAATTCGCGGTTCTCT+GGG + Chr4:39035523-39035542 None:intergenic 50.0%
ACCAGACTGCTTTGTCTCAC+TGG + Chr4:39036604-39036623 None:intergenic 50.0%
ACCAGTGAGACAAAGCAGTC+TGG - Chr4:39036600-39036619 MsG0480020327.01.T01:intron 50.0%
AGAGGTTAGAACGCACGTTC+TGG + Chr4:39035563-39035582 None:intergenic 50.0%
AGGGTTTAGTAGGCTGTAGG+AGG + Chr4:39033890-39033909 None:intergenic 50.0%
CATGTTTAAGGGGTTCACGG+AGG - Chr4:39033530-39033549 MsG0480020327.01.T01:intron 50.0%
CCAACTTCCTCTCAAACGAC+TGG + Chr4:39034129-39034148 None:intergenic 50.0%
CCAGTCGTTTGAGAGGAAGT+TGG - Chr4:39034126-39034145 MsG0480020327.01.T01:intron 50.0%
CGGTTTGATGGGAGAGTCAT+GGG - Chr4:39031873-39031892 MsG0480020327.01.T01:CDS 50.0%
GAAAGCTGGGGCTGATAAAC+AGG + Chr4:39036651-39036670 None:intergenic 50.0%
GAACGTGCATTTCACTACCC+CGG + Chr4:39037420-39037439 None:intergenic 50.0%
GAGATATCAGGCTCTTGGAC+TGG - Chr4:39036326-39036345 MsG0480020327.01.T01:intron 50.0%
GAGGTTAGAACGCACGTTCT+GGG + Chr4:39035562-39035581 None:intergenic 50.0%
GATAGAGGACAATGAGGAGG+AGG + Chr4:39033991-39034010 None:intergenic 50.0%
GCAATTTAGGTGACTAGGGG+CGG - Chr4:39035062-39035081 MsG0480020327.01.T01:intron 50.0%
TAACCGAATTCGCGGTTCTC+TGG + Chr4:39035524-39035543 None:intergenic 50.0%
TTGAGAGGAAGTTGGGGCTT+TGG - Chr4:39034134-39034153 MsG0480020327.01.T01:intron 50.0%
TTGCCTGAGACTCGCACAAA+TGG - Chr4:39032184-39032203 MsG0480020327.01.T01:CDS 50.0%
! ATGGGGAAGCTTCGGTTTGA+TGG - Chr4:39031861-39031880 MsG0480020327.01.T01:CDS 50.0%
! GAGGTATCCAGTCGTTTGAG+AGG - Chr4:39034119-39034138 MsG0480020327.01.T01:intron 50.0%
! GGAAGTTGGGGCTTTGGTTT+AGG - Chr4:39034140-39034159 MsG0480020327.01.T01:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + Chr4:39034985-39035004 None:intergenic 50.0%
! GGGTGGCTAATGTTTTGTGG+CGG - Chr4:39033495-39033514 MsG0480020327.01.T01:intron 50.0%
! GTCTAAGGGCATAACGAACG+AGG + Chr4:39033252-39033271 None:intergenic 50.0%
! TCGGTTTGATGGGAGAGTCA+TGG - Chr4:39031872-39031891 MsG0480020327.01.T01:CDS 50.0%
! TGGACTGGACACTAATGTGC+TGG - Chr4:39036341-39036360 MsG0480020327.01.T01:intron 50.0%
! TGGGGAAGCTTCGGTTTGAT+GGG - Chr4:39031862-39031881 MsG0480020327.01.T01:CDS 50.0%
! TGGGGCTTTGGTTTAGGCAA+GGG - Chr4:39034146-39034165 MsG0480020327.01.T01:intron 50.0%
! TTGGGGCTTTGGTTTAGGCA+AGG - Chr4:39034145-39034164 MsG0480020327.01.T01:intron 50.0%
!! ACTCTGTGTTGTGGGTTAGG+TGG - Chr4:39033584-39033603 MsG0480020327.01.T01:intron 50.0%
!! GAAAGCGTCGAAGAAAGCTG+GGG + Chr4:39036663-39036682 None:intergenic 50.0%
ACCGAATTCGCGGTTCTCTG+GGG + Chr4:39035522-39035541 None:intergenic 55.0%
GGACAATGAGGAGGAGGAAG+TGG + Chr4:39033985-39034004 None:intergenic 55.0%
! CTGGACACTAATGTGCTGGC+TGG - Chr4:39036345-39036364 MsG0480020327.01.T01:intron 55.0%
! GCTGACACATTGGGATTGGC+TGG - Chr4:39036543-39036562 MsG0480020327.01.T01:intron 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - Chr4:39035026-39035045 MsG0480020327.01.T01:intron 55.0%
! TAGAACGCACGTTCTGGGCA+TGG + Chr4:39035557-39035576 None:intergenic 55.0%
!! AGGTGTGGGTGCTGACACAT+TGG - Chr4:39036533-39036552 MsG0480020327.01.T01:intron 55.0%
!! GGGTGCTGACACATTGGGAT+TGG - Chr4:39036539-39036558 MsG0480020327.01.T01:intron 55.0%
!! GGTGTGGGTGCTGACACATT+GGG - Chr4:39036534-39036553 MsG0480020327.01.T01:intron 55.0%
!! GTGCCATTTGTGCGAGTCTC+AGG + Chr4:39032190-39032209 None:intergenic 55.0%
!! GTGCTGGCTGGAGCTAGATA+TGG - Chr4:39036357-39036376 MsG0480020327.01.T01:intron 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + Chr4:39035002-39035021 None:intergenic 55.0%
CCCCCAGAGAACCGCGAATT+CGG - Chr4:39035518-39035537 MsG0480020327.01.T01:intron 60.0%
CCGAATTCGCGGTTCTCTGG+GGG + Chr4:39035521-39035540 None:intergenic 60.0%
CGAATTCGCGGTTCTCTGGG+GGG + Chr4:39035520-39035539 None:intergenic 60.0%
CTAGGGGCGGACCGCAATTA+AGG - Chr4:39035075-39035094 MsG0480020327.01.T01:intron 60.0%
! AATTCGCGGTTCTCTGGGGG+GGG + Chr4:39035518-39035537 None:intergenic 60.0%
! GAATTCGCGGTTCTCTGGGG+GGG + Chr4:39035519-39035538 None:intergenic 60.0%
! ATTCGCGGTTCTCTGGGGGG+GGG + Chr4:39035517-39035536 None:intergenic 65.0%
! TTCGCGGTTCTCTGGGGGGG+GGG + Chr4:39035516-39035535 None:intergenic 70.0%
! TCGCGGTTCTCTGGGGGGGG+GGG + Chr4:39035515-39035534 None:intergenic 75.0%
!! CGCGGTTCTCTGGGGGGGGG+GGG + Chr4:39035514-39035533 None:intergenic 80.0%
!! CGGTTCTCTGGGGGGGGGGG+GGG + Chr4:39035512-39035531 None:intergenic 80.0%
!! GCGGTTCTCTGGGGGGGGGG+GGG + Chr4:39035513-39035532 None:intergenic 80.0%
!! GGTTCTCTGGGGGGGGGGGG+GGG + Chr4:39035511-39035530 None:intergenic 80.0%
!! GTTCTCTGGGGGGGGGGGGG+GGG + Chr4:39035510-39035529 None:intergenic 80.0%
!! TTCTCTGGGGGGGGGGGGGG+GGG + Chr4:39035509-39035528 None:intergenic 80.0%
!! TCTCTGGGGGGGGGGGGGGG+GGG + Chr4:39035508-39035527 None:intergenic 85.0%
! TCTGGGGGGGGGGGGGGGGG+GGG + Chr4:39035506-39035525 None:intergenic 90.0%
!! CTCTGGGGGGGGGGGGGGGG+GGG + Chr4:39035507-39035526 None:intergenic 90.0%
! CTGGGGGGGGGGGGGGGGGG+GGG + Chr4:39035505-39035524 None:intergenic 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + Chr4:39035504-39035523 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr4 gene 39031111 39037443 39031111 ID=MsG0480020327.01;Name=MsG0480020327.01
Chr4 mRNA 39031111 39037443 39031111 ID=MsG0480020327.01.T01;Parent=MsG0480020327.01;Name=MsG0480020327.01.T01;_AED=0.43;_eAED=0.44;_QI=0|1|0.75|1|0.66|0.5|4|429|200
Chr4 exon 39031111 39031496 39031111 ID=MsG0480020327.01.T01:exon:15008;Parent=MsG0480020327.01.T01
Chr4 exon 39031618 39032056 39031618 ID=MsG0480020327.01.T01:exon:15007;Parent=MsG0480020327.01.T01
Chr4 exon 39032138 39032227 39032138 ID=MsG0480020327.01.T01:exon:15006;Parent=MsG0480020327.01.T01
Chr4 exon 39037327 39037443 39037327 ID=MsG0480020327.01.T01:exon:15005;Parent=MsG0480020327.01.T01
Chr4 CDS 39037327 39037443 39037327 ID=MsG0480020327.01.T01:cds;Parent=MsG0480020327.01.T01
Chr4 CDS 39032138 39032227 39032138 ID=MsG0480020327.01.T01:cds;Parent=MsG0480020327.01.T01
Chr4 CDS 39031661 39032056 39031661 ID=MsG0480020327.01.T01:cds;Parent=MsG0480020327.01.T01
Chr4 three_prime_UTR 39031618 39031660 39031618 ID=MsG0480020327.01.T01:three_prime_utr;Parent=MsG0480020327.01.T01
Chr4 three_prime_UTR 39031111 39031496 39031111 ID=MsG0480020327.01.T01:three_prime_utr;Parent=MsG0480020327.01.T01
Gene Sequence

>MsG0480020327.01.T01

TTGAATGTGCATGTTATTCTTTCAGCGGATGAAAATTCTACCAAAGGACATTTGGATGGTTTACCTAAGAATTTGGAGAATAAGCTTGCTGGTCATGCTAACGTGTTCAATTCTTTGAGATATCAGGCTCTTGGACTGGACACTAATGTGCTGGCTGGAGCTAGATATGGTACTCAAGTTAGTGCAACCAAGAGTCCAATGCTATTGGGACTCAACACTCTGATGGCAAGAAACATTGAGAGAGGTGTGGGTGCTGACACATTGGGATTGGCTGGTCATAGACGTTTTATGAGTGACATCCCAAGTAAAACCAGTGAGACAAAGCAGTCTGGTTTTCGCCCATTATCTCCTCATCTTCCTGTTTATCAGCCCCAGCTTTCTTCGACGCTTTCAATTTGCAATAGAATTGCTGGAGCTTTCCTAGCTGCTGTCACCTTGCTTTTTTATATGATATACATGAAAGTGGGTTTGGTTGGTCTCACCTTTGATCCATTCTACCAGTTCGTATTCTATTCATCAAAACTCCACCTACTTGCTGTTGAGATTTCTGCCCTAGCCATGTCCTATCATCTGTATAGTGCAATTCGTCATTTATTCATATGA
Protein sequence

>MsG0480020327.01.T01

LNVHVILSADENSTKGHLDGLPKNLENKLAGHANVFNSLRYQALGLDTNVLAGARYGTQVSATKSPMLLGLNTLMARNIERGVGADTLGLAGHRRFMSDIPSKTSETKQSGFRPLSPHLPVYQPQLSSTLSICNRIAGAFLAAVTLLFYMIYMKVGLVGLTFDPFYQFVFYSSKLHLLAVEISALAMSYHLYSAIRHLFI*