AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036199.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036199.01.T01 MTR_7g009730 89.423 104 10 1 113 215 218 321 1.34e-58 194
MsG0780036199.01.T01 MTR_7g009730 70.588 102 18 1 12 113 62 151 8.65e-39 141
MsG0780036199.01.T01 MTR_3g053330 74.713 87 22 0 112 198 249 335 5.96e-44 154
MsG0780036199.01.T01 MTR_7g110720 77.215 79 18 0 112 190 187 265 2.72e-42 148
MsG0780036199.01.T01 MTR_7g110720 77.215 79 18 0 112 190 214 292 3.72e-42 148
MsG0780036199.01.T01 MTR_4g094412 73.585 106 22 1 113 212 233 338 7.77e-42 148
MsG0780036199.01.T01 MTR_4g094412 73.585 106 22 1 113 212 242 347 8.09e-42 148
MsG0780036199.01.T01 MTR_4g132430 70.103 97 29 0 111 207 124 220 6.91e-41 143
MsG0780036199.01.T01 MTR_2g088000 68.421 95 30 0 112 206 347 441 1.87e-40 146
MsG0780036199.01.T01 MTR_4g132430 70.103 97 29 0 111 207 258 354 5.98e-40 143
MsG0780036199.01.T01 MTR_4g049760 62.500 96 36 0 112 207 288 383 8.96e-39 141
MsG0780036199.01.T01 MTR_4g107970 93.443 61 4 0 113 173 177 237 1.06e-38 140
MsG0780036199.01.T01 MTR_4g107970 93.443 61 4 0 113 173 254 314 1.71e-38 141
MsG0780036199.01.T01 MTR_4g049790 60.417 96 38 0 112 207 310 405 3.77e-37 137
MsG0780036199.01.T01 MTR_2g023930 83.871 62 10 0 112 173 303 364 3.45e-36 134
MsG0780036199.01.T01 MTR_2g045360 52.941 119 45 1 112 230 209 316 5.08e-35 129
MsG0780036199.01.T01 MTR_4g047580 53.125 96 45 0 112 207 279 374 2.35e-31 120
MsG0780036199.01.T01 MTR_4g007060 42.373 118 60 2 92 201 100 217 6.91e-30 112
MsG0780036199.01.T01 MTR_4g007060 42.373 118 60 2 92 201 134 251 1.06e-29 113
MsG0780036199.01.T01 MTR_2g105060 40.870 115 57 1 108 211 88 202 7.34e-26 101
MsG0780036199.01.T01 MTR_2g105060 40.870 115 57 1 108 211 163 277 9.10e-26 102
MsG0780036199.01.T01 MTR_3g106060 61.017 59 23 0 113 171 137 195 3.35e-25 100
MsG0780036199.01.T01 MTR_1g013760 50.602 83 40 1 108 190 135 216 1.02e-24 99.4
MsG0780036199.01.T01 MTR_1g013790 56.250 64 28 0 108 171 95 158 1.92e-24 97.8
MsG0780036199.01.T01 MTR_7g071120 53.521 71 32 1 112 182 322 391 2.11e-22 95.1
MsG0780036199.01.T01 MTR_7g071120 53.448 58 25 2 115 172 167 222 3.71e-13 68.6
MsG0780036199.01.T01 MTR_5g074400 61.667 60 22 1 112 171 418 476 4.78e-22 94.4
MsG0780036199.01.T01 MTR_5g074400 52.542 59 26 2 114 172 243 299 8.59e-14 70.5
MsG0780036199.01.T01 MTR_3g031220 60.000 60 23 1 112 171 363 421 6.95e-22 94.0
MsG0780036199.01.T01 MTR_3g031220 51.613 62 28 2 114 175 198 257 2.94e-14 71.6
MsG0780036199.01.T01 MTR_3g009470 50.588 85 39 2 112 194 493 576 8.65e-22 94.0
MsG0780036199.01.T01 MTR_3g009470 51.724 58 26 2 115 172 281 336 1.64e-12 66.6
MsG0780036199.01.T01 MTR_5g094430 54.412 68 30 1 112 179 228 294 1.33e-21 92.4
MsG0780036199.01.T01 MTR_5g094430 52.542 59 26 2 114 172 66 122 1.25e-12 66.6
MsG0780036199.01.T01 MTR_5g094430 54.412 68 30 1 112 179 250 316 1.33e-21 92.8
MsG0780036199.01.T01 MTR_5g094430 52.542 59 26 2 114 172 88 144 1.02e-12 67.0
MsG0780036199.01.T01 MTR_3g104750 40.179 112 65 2 61 172 52 161 1.42e-21 87.8
MsG0780036199.01.T01 MTR_5g094430 54.412 68 30 1 112 179 362 428 2.53e-21 92.4
MsG0780036199.01.T01 MTR_5g094430 52.542 59 26 2 114 172 200 256 1.66e-12 66.6
MsG0780036199.01.T01 MTR_5g042920 60.000 60 23 1 112 171 318 376 3.28e-21 91.7
MsG0780036199.01.T01 MTR_5g042920 52.542 59 24 3 114 171 151 206 7.38e-13 67.4
MsG0780036199.01.T01 MTR_2g033820 46.667 90 44 2 113 202 202 287 3.34e-21 91.3
MsG0780036199.01.T01 MTR_3g056100 60.000 60 23 1 112 171 400 458 3.86e-21 92.0
MsG0780036199.01.T01 MTR_3g056100 50.847 59 27 2 114 172 243 299 6.15e-12 65.1
MsG0780036199.01.T01 MTR_3g056100 60.000 60 23 1 112 171 413 471 3.98e-21 91.7
MsG0780036199.01.T01 MTR_3g056100 50.847 59 27 2 114 172 243 299 6.08e-12 65.1
MsG0780036199.01.T01 MTR_3g056100 60.000 60 23 1 112 171 256 314 5.66e-21 90.9
MsG0780036199.01.T01 MTR_3g056100 50.847 59 27 2 114 172 99 155 7.00e-12 64.7
MsG0780036199.01.T01 MTR_3g056100 60.000 60 23 1 112 171 269 327 5.67e-21 90.9
MsG0780036199.01.T01 MTR_3g056100 50.847 59 27 2 114 172 99 155 6.41e-12 64.7
MsG0780036199.01.T01 MTR_4g013260 56.452 62 26 1 112 173 334 394 5.76e-21 91.3
MsG0780036199.01.T01 MTR_4g013260 51.724 58 27 1 115 172 185 241 5.28e-15 73.9
MsG0780036199.01.T01 MTR_7g028415 48.649 74 37 1 112 185 91 163 1.70e-20 85.5
MsG0780036199.01.T01 MTR_7g028710 48.649 74 37 1 112 185 91 163 1.70e-20 85.5
MsG0780036199.01.T01 MTR_7g011820 60.000 60 23 1 112 171 408 466 2.03e-20 89.7
MsG0780036199.01.T01 MTR_7g011820 50.000 68 30 3 104 171 220 283 1.91e-12 66.2
MsG0780036199.01.T01 MTR_1g015140 55.738 61 26 1 112 172 100 159 2.97e-20 84.3
MsG0780036199.01.T01 MTR_4g082580 40.769 130 64 6 46 171 214 334 3.22e-20 88.6
MsG0780036199.01.T01 MTR_4g082580 38.824 85 49 2 114 198 145 226 9.40e-11 61.2
MsG0780036199.01.T01 MTR_7g080020 36.154 130 74 3 81 203 461 588 4.13e-20 89.0
MsG0780036199.01.T01 MTR_7g100510 56.944 72 27 3 107 176 355 424 7.82e-20 87.8
MsG0780036199.01.T01 MTR_7g100510 43.011 93 48 4 115 205 190 279 1.74e-13 69.3
MsG0780036199.01.T01 MTR_7g079010 59.016 61 24 1 112 172 139 198 8.75e-20 84.7
MsG0780036199.01.T01 MTR_7g109600 43.478 92 44 2 101 187 35 123 1.11e-19 85.1
MsG0780036199.01.T01 MTR_1g086790 46.591 88 45 2 113 199 157 243 1.48e-19 85.9
MsG0780036199.01.T01 MTR_7g080000 56.667 60 25 1 112 171 430 488 1.51e-19 87.4
MsG0780036199.01.T01 MTR_7g080000 42.857 77 39 3 95 171 218 289 2.76e-11 63.2
MsG0780036199.01.T01 MTR_4g094908 57.627 59 25 0 115 173 267 325 2.07e-19 85.5
MsG0780036199.01.T01 MTR_4g094588 39.423 104 58 2 113 212 177 279 2.36e-19 85.5
MsG0780036199.01.T01 MTR_8g096730 44.928 69 37 1 112 180 68 135 7.79e-19 80.5
MsG0780036199.01.T01 MTR_5g016610 54.839 62 28 0 115 176 200 261 8.13e-19 83.2
MsG0780036199.01.T01 MTR_5g097490 55.000 60 26 1 112 171 250 308 1.03e-18 84.3
MsG0780036199.01.T01 MTR_4g130900 46.429 84 41 2 88 171 336 415 1.10e-18 84.7
MsG0780036199.01.T01 MTR_1g009613 55.000 60 27 0 115 174 263 322 1.44e-18 83.2
MsG0780036199.01.T01 MTR_7g109800 41.237 97 51 3 113 207 144 236 3.35e-18 81.6
MsG0780036199.01.T01 MTR_1g070455 56.140 57 25 0 115 171 294 350 3.56e-18 82.4
MsG0780036199.01.T01 MTR_1g077780 43.182 88 48 2 112 199 60 145 1.46e-17 77.0
MsG0780036199.01.T01 MTR_4g122530 36.220 127 56 5 113 227 207 320 1.74e-17 80.9
MsG0780036199.01.T01 MTR_5g091390 52.174 69 32 1 113 181 156 223 2.20e-17 79.7
MsG0780036199.01.T01 MTR_2g032030 47.887 71 37 0 119 189 272 342 2.26e-17 80.9
MsG0780036199.01.T01 MTR_8g087000 53.968 63 29 0 114 176 76 138 2.29e-17 78.6
MsG0780036199.01.T01 MTR_8g087000 53.968 63 29 0 114 176 77 139 2.40e-17 78.6
MsG0780036199.01.T01 MTR_5g044695 87.500 32 4 0 111 142 74 105 3.15e-17 74.7
MsG0780036199.01.T01 MTR_4g127040 48.529 68 35 0 112 179 243 310 3.22e-17 79.3
MsG0780036199.01.T01 MTR_4g007060 45.455 66 30 1 92 151 134 199 3.28e-17 78.2
MsG0780036199.01.T01 MTR_2g032030 47.887 71 37 0 119 189 272 342 5.94e-17 79.3
MsG0780036199.01.T01 MTR_8g092010 44.872 78 40 2 112 187 106 182 6.20e-17 76.3
MsG0780036199.01.T01 MTR_3g108960 53.968 63 26 1 115 174 315 377 1.43e-16 78.2
MsG0780036199.01.T01 MTR_2g083870 45.349 86 45 1 98 183 66 149 1.44e-16 76.6
MsG0780036199.01.T01 MTR_8g028565 46.575 73 39 0 112 184 153 225 1.64e-16 77.4
MsG0780036199.01.T01 MTR_2g024350 39.000 100 54 1 115 207 9 108 1.81e-16 75.9
MsG0780036199.01.T01 MTR_5g043880 55.932 59 25 1 113 171 123 180 2.28e-16 76.6
MsG0780036199.01.T01 MTR_6g038890 87.500 32 4 0 111 142 185 216 2.67e-16 75.1
MsG0780036199.01.T01 MTR_8g092140 53.333 60 27 1 112 171 158 216 3.50e-16 75.1
MsG0780036199.01.T01 MTR_7g062220 55.000 60 26 1 112 171 122 180 3.59e-16 76.3
MsG0780036199.01.T01 MTR_8g007270 53.333 60 27 1 112 171 152 210 3.65e-16 75.1
MsG0780036199.01.T01 MTR_3g095080 53.333 60 27 1 112 171 142 200 3.99e-16 74.7
MsG0780036199.01.T01 MTR_7g079040 34.579 107 68 1 78 184 120 224 4.05e-16 76.3
MsG0780036199.01.T01 MTR_3g095080 53.333 60 27 1 112 171 166 224 4.28e-16 75.1
MsG0780036199.01.T01 MTR_2g016770 54.386 57 26 0 115 171 36 92 5.18e-16 74.3
MsG0780036199.01.T01 MTR_2g016770 54.386 57 26 0 115 171 28 84 6.65e-16 73.9
MsG0780036199.01.T01 MTR_0117s0040 54.386 57 26 0 115 171 75 131 7.17e-16 74.7
MsG0780036199.01.T01 MTR_2g024380 42.308 78 45 0 94 171 231 308 1.05e-15 75.9
MsG0780036199.01.T01 MTR_3g095040 50.000 60 29 1 112 171 116 174 2.70e-15 72.4
MsG0780036199.01.T01 MTR_8g098945 38.554 83 51 0 115 197 130 212 8.89e-15 72.0
MsG0780036199.01.T01 MTR_3g031220 51.613 62 28 2 114 175 198 257 1.62e-14 72.0
MsG0780036199.01.T01 MTR_1g099600 45.455 66 36 0 119 184 190 255 3.98e-14 70.5
MsG0780036199.01.T01 MTR_6g086555 54.839 62 26 2 113 173 205 265 8.21e-14 70.1
MsG0780036199.01.T01 MTR_3g009470 51.724 58 26 2 115 172 281 336 1.20e-12 67.0
MsG0780036199.01.T01 MTR_5g074200 48.276 58 28 2 114 171 220 275 2.60e-12 65.5
MsG0780036199.01.T01 MTR_7g117200 43.038 79 42 2 93 169 98 175 2.08e-11 62.8
MsG0780036199.01.T01 MTR_5g067680 50.877 57 26 1 115 169 203 259 3.54e-11 62.4
MsG0780036199.01.T01 MTR_1g078260 47.541 61 30 2 112 171 245 304 3.91e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036199.01.T01 AT5G15130 69.912 113 27 1 113 218 184 296 2.37e-45 158
MsG0780036199.01.T01 AT5G15130 69.912 113 27 1 113 218 226 338 2.46e-45 159
MsG0780036199.01.T01 AT1G68150 78.313 83 18 0 113 195 234 316 5.30e-45 154
MsG0780036199.01.T01 AT4G04450 75.862 87 21 0 112 198 196 282 2.85e-44 154
MsG0780036199.01.T01 AT4G04450 75.862 87 21 0 112 198 290 376 7.81e-44 154
MsG0780036199.01.T01 AT1G18860 90.164 61 6 0 113 173 238 298 1.47e-38 140
MsG0780036199.01.T01 AT1G62300 73.118 93 25 0 112 204 310 402 4.76e-38 139
MsG0780036199.01.T01 AT4G22070 85.484 62 9 0 112 173 295 356 5.13e-36 133
MsG0780036199.01.T01 AT4G22070 85.484 62 9 0 112 173 295 356 5.13e-36 133
MsG0780036199.01.T01 AT4G22070 85.484 62 9 0 112 173 295 356 5.13e-36 133
MsG0780036199.01.T01 AT4G22070 85.484 62 9 0 112 173 295 356 5.13e-36 133
MsG0780036199.01.T01 AT4G01720 83.607 61 10 0 113 173 238 298 1.76e-34 129
MsG0780036199.01.T01 AT1G69810 67.532 77 24 1 113 188 202 278 9.82e-32 119
MsG0780036199.01.T01 AT1G69810 67.532 77 24 1 113 188 144 220 1.33e-31 118
MsG0780036199.01.T01 AT4G31800 52.941 85 39 1 108 192 105 188 6.58e-28 106
MsG0780036199.01.T01 AT4G31800 52.941 85 39 1 108 192 170 253 7.27e-28 108
MsG0780036199.01.T01 AT2G25000 60.938 64 25 0 108 171 97 160 6.51e-26 101
MsG0780036199.01.T01 AT2G25000 60.938 64 25 0 108 171 97 160 6.51e-26 101
MsG0780036199.01.T01 AT2G25000 60.938 64 25 0 108 171 119 182 1.35e-25 100
MsG0780036199.01.T01 AT2G25000 60.938 64 25 0 108 171 140 203 1.63e-25 100
MsG0780036199.01.T01 AT1G80840 56.061 66 29 0 108 173 140 205 1.65e-25 101
MsG0780036199.01.T01 AT5G56270 45.918 98 50 2 112 209 485 579 6.44e-23 97.1
MsG0780036199.01.T01 AT5G56270 50.877 57 26 2 115 171 274 328 1.10e-11 64.3
MsG0780036199.01.T01 AT2G38470 53.947 76 33 2 112 187 360 433 9.01e-23 96.7
MsG0780036199.01.T01 AT2G38470 51.724 58 26 2 115 172 185 240 2.25e-13 69.3
MsG0780036199.01.T01 AT1G13960 59.677 62 24 1 112 173 254 314 8.29e-22 92.4
MsG0780036199.01.T01 AT1G13960 53.448 58 25 2 114 171 76 131 2.45e-13 68.6
MsG0780036199.01.T01 AT4G26640 35.766 137 68 4 112 229 203 338 1.01e-21 92.4
MsG0780036199.01.T01 AT4G26640 46.479 71 36 2 102 172 23 91 1.82e-12 66.2
MsG0780036199.01.T01 AT4G26640 35.766 137 68 4 112 229 203 338 1.01e-21 92.4
MsG0780036199.01.T01 AT4G26640 46.479 71 36 2 102 172 23 91 1.82e-12 66.2
MsG0780036199.01.T01 AT4G26640 35.766 137 68 4 112 229 203 338 1.01e-21 92.4
MsG0780036199.01.T01 AT4G26640 46.479 71 36 2 102 172 23 91 1.82e-12 66.2
MsG0780036199.01.T01 AT4G26640 35.766 137 68 4 112 229 203 338 1.01e-21 92.4
MsG0780036199.01.T01 AT4G26640 46.479 71 36 2 102 172 23 91 1.82e-12 66.2
MsG0780036199.01.T01 AT1G13960 59.677 62 24 1 112 173 407 467 1.19e-21 93.2
MsG0780036199.01.T01 AT1G13960 53.448 58 25 2 114 171 229 284 1.51e-13 69.7
MsG0780036199.01.T01 AT2G04880 58.065 62 25 1 112 173 281 341 1.44e-21 92.8
MsG0780036199.01.T01 AT2G04880 42.553 94 49 4 112 203 109 199 8.93e-14 70.5
MsG0780036199.01.T01 AT2G04880 58.065 62 25 1 112 173 305 365 1.77e-21 92.8
MsG0780036199.01.T01 AT2G04880 50.820 61 28 2 112 172 109 167 9.54e-14 70.1
MsG0780036199.01.T01 AT4G26640 35.766 137 68 4 112 229 307 442 1.90e-21 92.4
MsG0780036199.01.T01 AT4G26640 46.479 71 36 2 102 172 127 195 1.75e-12 66.6
MsG0780036199.01.T01 AT4G26640 35.766 137 68 4 112 229 339 474 1.92e-21 92.8
MsG0780036199.01.T01 AT4G26640 46.479 71 36 2 102 172 159 227 1.61e-12 66.6
MsG0780036199.01.T01 AT4G26640 35.766 137 68 4 112 229 379 514 2.32e-21 92.4
MsG0780036199.01.T01 AT4G26640 46.479 71 36 2 102 172 199 267 1.80e-12 66.6
MsG0780036199.01.T01 AT2G03340 60.000 60 23 1 112 171 413 471 3.73e-21 91.7
MsG0780036199.01.T01 AT2G03340 55.000 60 25 2 114 173 250 307 2.12e-14 72.0
MsG0780036199.01.T01 AT5G13080 53.968 63 28 1 112 174 65 126 6.34e-21 85.9
MsG0780036199.01.T01 AT5G49520 38.596 114 53 3 113 212 220 330 6.87e-21 90.5
MsG0780036199.01.T01 AT5G26170 56.667 60 25 1 112 171 111 169 1.24e-20 85.9
MsG0780036199.01.T01 AT2G23320 61.017 59 23 0 115 173 241 299 1.29e-20 88.6
MsG0780036199.01.T01 AT1G29860 47.778 90 42 2 113 202 135 219 1.94e-20 87.8
MsG0780036199.01.T01 AT2G37260 47.253 91 43 2 87 173 236 325 2.42e-20 88.6
MsG0780036199.01.T01 AT2G37260 50.000 70 28 3 115 179 84 151 1.04e-13 69.7
MsG0780036199.01.T01 AT2G37260 47.253 91 43 2 87 173 238 327 2.49e-20 88.2
MsG0780036199.01.T01 AT2G37260 50.000 70 28 3 115 179 86 153 9.88e-14 69.7
MsG0780036199.01.T01 AT3G01080 60.000 60 23 1 112 171 304 362 2.95e-20 89.0
MsG0780036199.01.T01 AT3G01080 50.000 58 27 2 114 171 167 222 8.32e-11 61.6
MsG0780036199.01.T01 AT1G55600 57.627 59 24 1 114 172 307 364 3.05e-20 89.0
MsG0780036199.01.T01 AT5G41570 57.143 63 26 1 112 174 96 157 3.23e-20 84.7
MsG0780036199.01.T01 AT3G01080 60.000 60 23 1 112 171 342 400 3.26e-20 89.0
MsG0780036199.01.T01 AT3G01080 50.000 58 27 2 114 171 205 260 8.39e-11 61.6
MsG0780036199.01.T01 AT2G37260 47.253 91 43 2 87 173 318 407 4.50e-20 88.2
MsG0780036199.01.T01 AT2G37260 54.386 57 24 2 115 171 166 220 1.29e-13 69.7
MsG0780036199.01.T01 AT1G64000 57.143 63 26 1 112 174 112 173 5.85e-20 84.7
MsG0780036199.01.T01 AT1G29280 52.308 65 31 0 114 178 74 138 1.11e-19 85.1
MsG0780036199.01.T01 AT4G26440 43.878 98 50 3 112 209 370 462 1.30e-19 87.4
MsG0780036199.01.T01 AT3G04670 53.623 69 31 1 115 183 263 330 2.81e-19 85.1
MsG0780036199.01.T01 AT5G07100 54.839 62 27 1 112 173 139 199 7.40e-19 82.0
MsG0780036199.01.T01 AT5G07100 39.189 74 44 1 114 187 24 96 6.41e-11 60.5
MsG0780036199.01.T01 AT5G07100 54.839 62 27 1 112 173 139 199 7.40e-19 82.0
MsG0780036199.01.T01 AT5G07100 39.189 74 44 1 114 187 24 96 6.41e-11 60.5
MsG0780036199.01.T01 AT5G07100 54.839 62 27 1 112 173 139 199 7.40e-19 82.0
MsG0780036199.01.T01 AT5G07100 39.189 74 44 1 114 187 24 96 6.41e-11 60.5
MsG0780036199.01.T01 AT5G07100 54.839 62 27 1 112 173 139 199 7.40e-19 82.0
MsG0780036199.01.T01 AT5G07100 39.189 74 44 1 114 187 24 96 6.41e-11 60.5
MsG0780036199.01.T01 AT4G24240 52.239 67 32 0 114 180 281 347 9.37e-19 84.0
MsG0780036199.01.T01 AT4G18170 55.738 61 26 1 113 173 171 230 9.89e-19 83.6
MsG0780036199.01.T01 AT5G28650 53.846 65 29 1 119 183 267 330 1.09e-18 83.6
MsG0780036199.01.T01 AT2G46130 57.377 61 25 1 112 172 28 87 1.19e-18 78.6
MsG0780036199.01.T01 AT5G07100 56.667 60 25 1 112 171 232 290 1.27e-18 83.2
MsG0780036199.01.T01 AT2G30590 56.897 58 25 0 115 172 314 371 1.33e-18 84.0
MsG0780036199.01.T01 AT5G46350 43.373 83 46 1 113 195 182 263 1.37e-18 83.2
MsG0780036199.01.T01 AT2G47260 45.349 86 42 2 113 194 173 257 1.65e-18 83.2
MsG0780036199.01.T01 AT4G30935 45.882 85 39 2 112 190 329 412 1.97e-18 84.0
MsG0780036199.01.T01 AT1G69310 59.322 59 23 1 113 171 146 203 2.99e-18 81.6
MsG0780036199.01.T01 AT1G69310 59.322 59 23 1 113 171 146 203 2.99e-18 81.6
MsG0780036199.01.T01 AT1G69310 59.322 59 23 1 113 171 146 203 2.99e-18 81.6
MsG0780036199.01.T01 AT2G30250 43.820 89 39 2 95 173 299 386 4.70e-18 82.4
MsG0780036199.01.T01 AT2G30250 40.449 89 42 4 93 172 136 222 9.94e-11 61.2
MsG0780036199.01.T01 AT2G24570 46.341 82 40 1 115 196 244 321 1.26e-17 80.5
MsG0780036199.01.T01 AT4G31550 56.140 57 25 0 115 171 247 303 1.50e-17 80.5
MsG0780036199.01.T01 AT4G31550 56.140 57 25 0 115 171 246 302 1.56e-17 80.5
MsG0780036199.01.T01 AT3G58710 45.161 93 49 1 81 173 40 130 1.86e-17 79.3
MsG0780036199.01.T01 AT3G01970 51.613 62 29 1 112 173 63 123 2.21e-17 76.6
MsG0780036199.01.T01 AT5G64810 51.667 60 28 1 112 171 108 166 2.68e-17 77.4
MsG0780036199.01.T01 AT2G21900 45.455 66 35 1 107 172 102 166 3.43e-17 77.4
MsG0780036199.01.T01 AT3G58710 38.843 121 67 2 60 173 9 129 3.57e-17 78.6
MsG0780036199.01.T01 AT3G62340 56.667 60 25 1 113 172 117 175 8.73e-17 77.8
MsG0780036199.01.T01 AT1G30650 50.794 63 31 0 119 181 222 284 1.02e-16 79.0
MsG0780036199.01.T01 AT4G39410 55.000 60 26 1 112 171 221 279 1.10e-16 77.8
MsG0780036199.01.T01 AT2G44745 53.333 60 27 1 112 171 143 201 1.41e-16 75.9
MsG0780036199.01.T01 AT2G34830 50.794 63 31 0 119 181 220 282 2.96e-16 77.4
MsG0780036199.01.T01 AT4G01250 45.205 73 40 0 112 184 126 198 3.23e-16 76.3
MsG0780036199.01.T01 AT2G34830 50.794 63 31 0 119 181 229 291 3.43e-16 77.4
MsG0780036199.01.T01 AT5G52830 50.000 66 33 0 119 184 170 235 1.06e-15 75.5
MsG0780036199.01.T01 AT4G23550 42.308 78 45 0 112 189 138 215 1.86e-15 74.3
MsG0780036199.01.T01 AT5G43290 49.275 69 34 1 103 171 103 170 2.93e-15 73.6
MsG0780036199.01.T01 AT4G31800 59.091 44 18 0 108 151 170 213 3.02e-15 72.8
MsG0780036199.01.T01 AT5G45050 33.607 122 77 1 92 209 1130 1251 5.05e-14 71.2
MsG0780036199.01.T01 AT5G45050 33.607 122 77 1 92 209 1019 1140 5.58e-14 71.2
MsG0780036199.01.T01 AT5G45050 33.607 122 77 1 92 209 1158 1279 5.61e-14 71.2
MsG0780036199.01.T01 AT2G46130 52.459 61 24 2 112 172 28 83 1.90e-13 64.7
MsG0780036199.01.T01 AT1G69310 54.237 59 22 2 113 171 146 199 4.14e-13 67.4
MsG0780036199.01.T01 AT4G11070 43.038 79 41 2 93 169 122 198 1.07e-11 63.5
MsG0780036199.01.T01 AT4G11070 43.038 79 41 2 93 169 90 166 1.21e-11 63.2
MsG0780036199.01.T01 AT2G40740 51.724 58 26 1 114 169 173 230 1.30e-11 63.2
MsG0780036199.01.T01 AT5G45260 43.836 73 39 1 119 189 1213 1285 1.42e-11 64.3
MsG0780036199.01.T01 AT2G40740 51.724 58 26 1 114 169 182 239 1.68e-11 63.2
MsG0780036199.01.T01 AT2G46400 38.000 100 59 2 73 169 62 161 2.43e-11 62.4
MsG0780036199.01.T01 AT5G24110 40.278 72 41 1 100 169 99 170 2.83e-11 62.4
MsG0780036199.01.T01 AT3G01080 50.000 58 27 2 114 171 205 260 5.86e-11 61.6
MsG0780036199.01.T01 AT4G23810 41.772 79 42 2 93 169 139 215 9.48e-11 60.8

Find 95 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACAACAATTCCACATTT+TGG 0.137155 7:+4618408 MsG0780036199.01.T01:CDS
GAACAATAATAACAATAAAT+AGG 0.162892 7:+4618680 MsG0780036199.01.T01:three_prime_UTR
AACAATTTGTTGAATCAAAA+TGG 0.181145 7:+4619012 MsG0780036199.01.T01:three_prime_UTR
TCTTTCTCTTTAGGTTTGTT+AGG 0.187408 7:-4617152 None:intergenic
TCCATATCTTCTTTCTCTTT+AGG 0.253785 7:-4617161 None:intergenic
GATGATATTGGTGTGAAATT+TGG 0.273603 7:-4618651 None:intergenic
TTGTTGGAAACAAATTATTA+TGG 0.295644 7:-4618524 None:intergenic
GCTTCTTTCTTATACTCATT+TGG 0.300183 7:-4617113 None:intergenic
GTATATACCTGTTTCCTAAC+TGG 0.305967 7:-4617951 None:intergenic
ACATGTCATCAGCACATCTT+TGG 0.314882 7:-4618238 None:intergenic
AACAATAATAACAATAAATA+GGG 0.321815 7:+4618681 MsG0780036199.01.T01:three_prime_UTR
AGAAATAGAGAGAATGGTTT+AGG 0.336259 7:+4618943 MsG0780036199.01.T01:three_prime_UTR
GATCCTCCACTGATGTTATA+TGG 0.336883 7:+4619241 MsG0780036199.01.T01:three_prime_UTR
GGATGTCAATGGAGGAAATA+TGG 0.344144 7:+4617861 MsG0780036199.01.T01:CDS
GCTGCAGTTTCGTCGATTGT+AGG 0.370957 7:+4618890 MsG0780036199.01.T01:three_prime_UTR
AGAGAGAATGGTTTAGGTGC+AGG 0.371097 7:+4618949 MsG0780036199.01.T01:three_prime_UTR
CTTTCTCTTTAGGTTTGTTA+GGG 0.381231 7:-4617151 None:intergenic
AACCCCTTCAAGGCAAGCTT+TGG 0.383268 7:+4618811 MsG0780036199.01.T01:three_prime_UTR
TGGATTAGACTCTAAATATA+TGG 0.384134 7:+4617199 MsG0780036199.01.T01:CDS
GTGTTCTTGATTGTTCATAT+TGG 0.389663 7:-4618473 None:intergenic
TCACACCAATATCATCCATT+TGG 0.393132 7:+4618658 MsG0780036199.01.T01:three_prime_UTR
TTGTTCCAAATGGATGATAT+TGG 0.395825 7:-4618663 None:intergenic
GGAATGAAGAAATGTTGTTT+TGG 0.395896 7:-4618495 None:intergenic
GCAAGAAGAAATAGAGAGAA+TGG 0.396269 7:+4618937 MsG0780036199.01.T01:three_prime_UTR
CTGCTCTTAGAGACAGAAAA+TGG 0.396322 7:-4619122 None:intergenic
GCAGCATCAATGATGGTATC+AGG 0.396478 7:+4618344 MsG0780036199.01.T01:CDS
AGCAATCAACTTCAACTTCA+TGG 0.396953 7:-4615941 None:intergenic
ACCTAAAGAGAAAGAAGATA+TGG 0.399352 7:+4617160 MsG0780036199.01.T01:CDS
TCAGCCAAAGCTTGCCTTGA+AGG 0.406538 7:-4618815 None:intergenic
ATTGTTATTATTGTTCCAAA+TGG 0.426970 7:-4618673 None:intergenic
GATCCTCTACCATTGTTGTA+TGG 0.428045 7:-4619281 None:intergenic
GAGAGAATGGTTTAGGTGCA+GGG 0.431975 7:+4618950 MsG0780036199.01.T01:three_prime_UTR
GGAAACAAATTATTATGGTT+TGG 0.447828 7:-4618519 None:intergenic
CAAGTTATCAAACCCCTTCA+AGG 0.448201 7:+4618801 MsG0780036199.01.T01:three_prime_UTR
TAGAGTCTAATCCAAGACTT+AGG 0.454455 7:-4617190 None:intergenic
GTTAGGTCAAGAGTGATTGT+TGG 0.454975 7:-4618540 None:intergenic
AAATTGTTTGAAACCATTTG+AGG 0.460922 7:-4618997 None:intergenic
CAGCCAAAGCTTGCCTTGAA+GGG 0.463069 7:-4618814 None:intergenic
TTGCACCAGCATGCCCAGTT+AGG 0.463809 7:+4617937 MsG0780036199.01.T01:CDS
ATGGAAGTTAACCTAAGTCT+TGG 0.464788 7:+4617179 MsG0780036199.01.T01:CDS
AGCATGCCCAGTTAGGAAAC+AGG 0.467255 7:+4617944 MsG0780036199.01.T01:CDS
CGATAGTATGCTCTTGGACA+TGG 0.469854 7:-4617906 None:intergenic
TTGATATTGTTAACAATGGA+TGG 0.469868 7:-4619158 None:intergenic
ACTTGGTGAGTATCCTCAAA+TGG 0.474336 7:+4618984 MsG0780036199.01.T01:three_prime_UTR
ATAAGGATGAAGGAGAAGTT+AGG 0.476278 7:-4618557 None:intergenic
TTGTTGAATCAAAATGGAAA+AGG 0.477286 7:+4619018 MsG0780036199.01.T01:three_prime_UTR
AACAAATTATTATGGTTTGG+TGG 0.478026 7:-4618516 None:intergenic
TATGGACAAAAGATAGCAAA+AGG 0.482613 7:+4617879 MsG0780036199.01.T01:CDS
GTGCAACGATAGTATGCTCT+TGG 0.484000 7:-4617912 None:intergenic
AGCTATGTTTGATGATGATA+AGG 0.489640 7:-4618574 None:intergenic
GAGGATCTAATTTCCTCGTA+GGG 0.489762 7:+4619297 MsG0780036199.01.T01:three_prime_UTR
GAGACAGAAAATGGCAATGA+AGG 0.505559 7:-4619113 None:intergenic
AAATGGAAAAGGATGTTTGA+AGG 0.506495 7:+4619029 MsG0780036199.01.T01:three_prime_UTR
ATCTTAATCACAACATATGA+AGG 0.508764 7:+4618263 MsG0780036199.01.T01:CDS
AGATTATTTGGCGAAAATCT+CGG 0.509888 7:-4618606 None:intergenic
TGTTTCCTAACTGGGCATGC+TGG 0.511634 7:-4617942 None:intergenic
ACTCATTTGGACTTCTTCCA+AGG 0.530874 7:-4617100 None:intergenic
TTCAGCTGCAGCATCAATGA+TGG 0.531666 7:+4618337 MsG0780036199.01.T01:CDS
GCTATAACTGAGTGAAGACT+TGG 0.533345 7:-4618866 None:intergenic
GAGTTTGTGTCACTTTGCCT+TGG 0.535145 7:+4617083 MsG0780036199.01.T01:CDS
TCTTCAATCTCTGAACTGCT+AGG 0.535963 7:-4615897 None:intergenic
ATTGTTGATATTGTTAACAA+TGG 0.540285 7:-4619162 None:intergenic
AATGGAAAAGGATGTTTGAA+GGG 0.540904 7:+4619030 MsG0780036199.01.T01:three_prime_UTR
GTTGGTGAGTTTCCAAAATG+TGG 0.541213 7:-4618420 None:intergenic
GCAGGGTTGAATTTGAAACT+TGG 0.541526 7:+4618967 MsG0780036199.01.T01:three_prime_UTR
AACTCACCAACACAACTCAA+TGG 0.541569 7:+4618432 MsG0780036199.01.T01:CDS
TATATACCTGTTTCCTAACT+GGG 0.545205 7:-4617950 None:intergenic
TCTTTCAAACAGATGAATGA+TGG 0.549199 7:+4617840 MsG0780036199.01.T01:intron
AGAGGATCTAATTTCCTCGT+AGG 0.552505 7:+4619296 MsG0780036199.01.T01:three_prime_UTR
ACTTGTCGTCAGTGGCTACA+TGG 0.555548 7:-4619345 None:intergenic
TTTAGACCATTGAGTTGTGT+TGG 0.558988 7:-4618438 None:intergenic
AAGGCAAAGTGACACAAACT+CGG 0.562482 7:-4617081 None:intergenic
TGTGAAATTTGGTTGTTGTG+TGG 0.564092 7:-4618640 None:intergenic
TTTGATGATGATAAGGATGA+AGG 0.564477 7:-4618567 None:intergenic
AGCCAAAGCTTGCCTTGAAG+GGG 0.565025 7:-4618813 None:intergenic
AGATGAATGATGGATGTCAA+TGG 0.566197 7:+4617850 MsG0780036199.01.T01:intron
TGATTGCTCTACTGAACAAG+AGG 0.569404 7:+4615956 MsG0780036199.01.T01:CDS
GCTGATGCTGTTACTTGAAG+AGG 0.585701 7:-4618299 None:intergenic
GCACCATACAACAATGGTAG+AGG 0.595665 7:+4619278 MsG0780036199.01.T01:three_prime_UTR
ATATTGTTAACAATGGATGG+AGG 0.596810 7:-4619155 None:intergenic
ATTCAACGACTTGTCGTCAG+TGG 0.604026 7:-4619353 None:intergenic
TACTGAACAAGAGGTTACAA+AGG 0.612360 7:+4615965 MsG0780036199.01.T01:CDS
GGACAAGGATCAAACAATGG+TGG 0.624982 7:+4618911 MsG0780036199.01.T01:three_prime_UTR
CTGATGCTGTTACTTGAAGA+GGG 0.633343 7:-4618298 None:intergenic
TCAAGTAACAGCATCAGCCA+TGG 0.634105 7:+4618304 MsG0780036199.01.T01:CDS
AGGCAAAGTGACACAAACTC+GGG 0.648244 7:-4617080 None:intergenic
GTTTCGTCGATTGTAGGACA+AGG 0.650226 7:+4618896 MsG0780036199.01.T01:three_prime_UTR
AGCTGAAGTTGTATATGCCA+TGG 0.650411 7:-4618321 None:intergenic
ACTGTACCATATAACATCAG+TGG 0.658228 7:-4619247 None:intergenic
GTACCATATAACATCAGTGG+AGG 0.679030 7:-4619244 None:intergenic
CTGACTGCACCATACAACAA+TGG 0.684485 7:+4619272 MsG0780036199.01.T01:three_prime_UTR
GTAGGACAAGGATCAAACAA+TGG 0.686881 7:+4618908 MsG0780036199.01.T01:three_prime_UTR
TGAATGATGGATGTCAATGG+AGG 0.707535 7:+4617853 MsG0780036199.01.T01:CDS
ACTGATGTTATATGGTACAG+TGG 0.714333 7:+4619249 MsG0780036199.01.T01:three_prime_UTR
AGAAGATTCAAAACCCTACG+AGG 0.715735 7:-4619310 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATAATAACAATAAATA+GGG + Chr7:4618681-4618700 MsG0780036199.01.T01:three_prime_UTR 10.0%
!! AGAAATACTTAAATTTAATT+TGG + Chr7:4617502-4617521 MsG0780036199.01.T01:intron 10.0%
!! ATTATTATATATATAACATG+TGG - Chr7:4616710-4616729 None:intergenic 10.0%
!!! ATTTTTTTTTTATGCTTATA+GGG - Chr7:4618130-4618149 None:intergenic 10.0%
!!! TATTTTTTTTTTATGCTTAT+AGG - Chr7:4618131-4618150 None:intergenic 10.0%
!! AGTCATAAAAAGATTTAATA+AGG - Chr7:4616572-4616591 None:intergenic 15.0%
!! GAACAATAATAACAATAAAT+AGG + Chr7:4618680-4618699 MsG0780036199.01.T01:three_prime_UTR 15.0%
!! TCTCTATACAATAATATATA+AGG - Chr7:4618158-4618177 None:intergenic 15.0%
!!! AATTTTATTTCTTCTTCATA+TGG + Chr7:4616629-4616648 MsG0780036199.01.T01:intron 15.0%
!!! ATTTTTTGCTTTCAAAATAT+CGG - Chr7:4618104-4618123 None:intergenic 15.0%
!!! TTATCCTTATTAATCTTTTT+AGG + Chr7:4616741-4616760 MsG0780036199.01.T01:intron 15.0%
!!! TTTTCTAGTTTCAAATTTAT+TGG + Chr7:4616241-4616260 MsG0780036199.01.T01:intron 15.0%
!! AACAATATGACTGATTATAT+AGG + Chr7:4616299-4616318 MsG0780036199.01.T01:intron 20.0%
!! AGACAAAAAAAGAAGAAAAT+CGG - Chr7:4617669-4617688 None:intergenic 20.0%
!! ATATTGAAAAAACTCAAGTT+AGG + Chr7:4618729-4618748 MsG0780036199.01.T01:three_prime_UTR 20.0%
!! ATGAACAAAACAATAATACA+TGG - Chr7:4616435-4616454 None:intergenic 20.0%
!! ATGTCCTAAAAAGATTAATA+AGG - Chr7:4616748-4616767 None:intergenic 20.0%
!! ATTGTTGATATTGTTAACAA+TGG - Chr7:4619165-4619184 None:intergenic 20.0%
!! GAACAAAAACTAAGATTATT+TGG - Chr7:4618621-4618640 None:intergenic 20.0%
!! TTGTTGGAAACAAATTATTA+TGG - Chr7:4618527-4618546 None:intergenic 20.0%
!!! AACAATTTGTTGAATCAAAA+TGG + Chr7:4619012-4619031 MsG0780036199.01.T01:three_prime_UTR 20.0%
!!! ACCTGAAATCATATAAATTT+TGG - Chr7:4618218-4618237 None:intergenic 20.0%
!!! ACTTGAGTTTTTTCAATATT+AGG - Chr7:4618728-4618747 None:intergenic 20.0%
!!! ATTGTTATTATTGTTCCAAA+TGG - Chr7:4618676-4618695 None:intergenic 20.0%
!!! CCTGAAATCATATAAATTTT+GGG - Chr7:4618217-4618236 None:intergenic 20.0%
!!! CTTGAGTTTTTTCAATATTA+GGG - Chr7:4618727-4618746 None:intergenic 20.0%
!!! TTGATGATTTGTTATGTATA+AGG + Chr7:4616085-4616104 MsG0780036199.01.T01:intron 20.0%
! AAGAAAAATTAGTGAGGATT+AGG - Chr7:4616002-4616021 None:intergenic 25.0%
! AAGTTGAAGTTGAAGAAAAA+AGG + Chr7:4617282-4617301 MsG0780036199.01.T01:intron 25.0%
! ATCTTAATCACAACATATGA+AGG + Chr7:4618263-4618282 MsG0780036199.01.T01:CDS 25.0%
! CCCAAAATTTATATGATTTC+AGG + Chr7:4618214-4618233 MsG0780036199.01.T01:intron 25.0%
! GGAAACAAATTATTATGGTT+TGG - Chr7:4618522-4618541 None:intergenic 25.0%
! GGTCACTATATCATAAAAAT+TGG + Chr7:4617523-4617542 MsG0780036199.01.T01:intron 25.0%
! TTGATATTGTTAACAATGGA+TGG - Chr7:4619161-4619180 None:intergenic 25.0%
! TTGTTGAATCAAAATGGAAA+AGG + Chr7:4619018-4619037 MsG0780036199.01.T01:three_prime_UTR 25.0%
!! AAATTGTTTGAAACCATTTG+AGG - Chr7:4619000-4619019 None:intergenic 25.0%
!! AACAAATTATTATGGTTTGG+TGG - Chr7:4618519-4618538 None:intergenic 25.0%
!! ATAACTTTTAACAGCTAACA+AGG - Chr7:4616480-4616499 None:intergenic 25.0%
!! TGGATTAGACTCTAAATATA+TGG + Chr7:4617199-4617218 MsG0780036199.01.T01:CDS 25.0%
!! TTTTCCTGGAAATGATTAAA+AGG - Chr7:4618755-4618774 None:intergenic 25.0%
!!! GATTTTGATAGAAATTTTCC+TGG - Chr7:4618769-4618788 None:intergenic 25.0%
!!! TAAAGTTTTGTTGTTGTAGA+AGG - Chr7:4616200-4616219 None:intergenic 25.0%
AAATGGAAAAGGATGTTTGA+AGG + Chr7:4619029-4619048 MsG0780036199.01.T01:three_prime_UTR 30.0%
AAATTAGTGAGGATTAGGAT+TGG - Chr7:4615997-4616016 None:intergenic 30.0%
AATGGAAAAGGATGTTTGAA+GGG + Chr7:4619030-4619049 MsG0780036199.01.T01:three_prime_UTR 30.0%
AATTCTTCTGAGCTATTCAT+TGG - Chr7:4617254-4617273 None:intergenic 30.0%
ACCTAAAGAGAAAGAAGATA+TGG + Chr7:4617160-4617179 MsG0780036199.01.T01:CDS 30.0%
AGAAATAGAGAGAATGGTTT+AGG + Chr7:4618943-4618962 MsG0780036199.01.T01:three_prime_UTR 30.0%
AGATTATTTGGCGAAAATCT+CGG - Chr7:4618609-4618628 None:intergenic 30.0%
ATATTGTTAACAATGGATGG+AGG - Chr7:4619158-4619177 None:intergenic 30.0%
ATCATACCGACAAAAATACT+AGG - Chr7:4616805-4616824 None:intergenic 30.0%
ATGCTGTACAATATTGTTGT+AGG + Chr7:4616333-4616352 MsG0780036199.01.T01:intron 30.0%
CAAACTAAAATGTGCTAATG+AGG + Chr7:4616889-4616908 MsG0780036199.01.T01:intron 30.0%
CTCCTAGAATTCAAAATCAT+AGG - Chr7:4616867-4616886 None:intergenic 30.0%
CTCTAAATATATGGTACCAT+CGG + Chr7:4617208-4617227 MsG0780036199.01.T01:intron 30.0%
GATGATATTGGTGTGAAATT+TGG - Chr7:4618654-4618673 None:intergenic 30.0%
GCTTCTTTCTTATACTCATT+TGG - Chr7:4617116-4617135 None:intergenic 30.0%
GTGTTCTTGATTGTTCATAT+TGG - Chr7:4618476-4618495 None:intergenic 30.0%
TAGAGAGATTGTTTGTGTTT+AGG + Chr7:4616276-4616295 MsG0780036199.01.T01:intron 30.0%
TATATACCTGTTTCCTAACT+GGG - Chr7:4617953-4617972 None:intergenic 30.0%
TATGGACAAAAGATAGCAAA+AGG + Chr7:4617879-4617898 MsG0780036199.01.T01:CDS 30.0%
TCCATATCTTCTTTCTCTTT+AGG - Chr7:4617164-4617183 None:intergenic 30.0%
TCTTCTTCATATGGTATAGT+TGG + Chr7:4616638-4616657 MsG0780036199.01.T01:intron 30.0%
TCTTTCAAACAGATGAATGA+TGG + Chr7:4617840-4617859 MsG0780036199.01.T01:intron 30.0%
TTGCACAAGAAAAATTAGTG+AGG - Chr7:4616008-4616027 None:intergenic 30.0%
TTGTTCCAAATGGATGATAT+TGG - Chr7:4618666-4618685 None:intergenic 30.0%
! AATTAGTTGATACTAACCGT+GGG - Chr7:4617420-4617439 None:intergenic 30.0%
! ACTCTAGTTTGACACAAAAA+TGG + Chr7:4616158-4616177 MsG0780036199.01.T01:intron 30.0%
! ATCACAACAATTCCACATTT+TGG + Chr7:4618408-4618427 MsG0780036199.01.T01:CDS 30.0%
! CTATGATTTTGAATTCTAGG+AGG + Chr7:4616865-4616884 MsG0780036199.01.T01:intron 30.0%
! CTCCTATGATTTTGAATTCT+AGG + Chr7:4616862-4616881 MsG0780036199.01.T01:intron 30.0%
! CTCTAGTTTGACACAAAAAT+GGG + Chr7:4616159-4616178 MsG0780036199.01.T01:intron 30.0%
! TAATTAGTTGATACTAACCG+TGG - Chr7:4617421-4617440 None:intergenic 30.0%
! TCTTTCTCTTTAGGTTTGTT+AGG - Chr7:4617155-4617174 None:intergenic 30.0%
!! AGCTATGTTTGATGATGATA+AGG - Chr7:4618577-4618596 None:intergenic 30.0%
!! CTTTCTCTTTAGGTTTGTTA+GGG - Chr7:4617154-4617173 None:intergenic 30.0%
!! GGAATGAAGAAATGTTGTTT+TGG - Chr7:4618498-4618517 None:intergenic 30.0%
!! TCATAGCCTAGTATTTTTGT+CGG + Chr7:4616796-4616815 MsG0780036199.01.T01:intron 30.0%
!! TTTGATGATGATAAGGATGA+AGG - Chr7:4618570-4618589 None:intergenic 30.0%
!!! TTTTTAGCTTGTGAACTTGT+TGG - Chr7:4619077-4619096 None:intergenic 30.0%
AAAATGTGCTAATGAGGAGA+TGG + Chr7:4616895-4616914 MsG0780036199.01.T01:intron 35.0%
AAATCAGATACTAACTCCGA+TGG - Chr7:4617227-4617246 None:intergenic 35.0%
AAATGTGCTAATGAGGAGAT+GGG + Chr7:4616896-4616915 MsG0780036199.01.T01:intron 35.0%
ACTGATGTTATATGGTACAG+TGG + Chr7:4619249-4619268 MsG0780036199.01.T01:three_prime_UTR 35.0%
ACTGTACCATATAACATCAG+TGG - Chr7:4619250-4619269 None:intergenic 35.0%
AGCAATCAACTTCAACTTCA+TGG - Chr7:4615944-4615963 None:intergenic 35.0%
ATAAGGATGAAGGAGAAGTT+AGG - Chr7:4618560-4618579 None:intergenic 35.0%
ATGGAAGTTAACCTAAGTCT+TGG + Chr7:4617179-4617198 MsG0780036199.01.T01:CDS 35.0%
CAATGAACGACAAACAAATG+AGG - Chr7:4618019-4618038 None:intergenic 35.0%
GATCTTAGAGTTTGTGAAGT+GGG + Chr7:4618044-4618063 MsG0780036199.01.T01:intron 35.0%
GCAAGAAGAAATAGAGAGAA+TGG + Chr7:4618937-4618956 MsG0780036199.01.T01:three_prime_UTR 35.0%
GTATATACCTGTTTCCTAAC+TGG - Chr7:4617954-4617973 None:intergenic 35.0%
TACTGAACAAGAGGTTACAA+AGG + Chr7:4615965-4615984 MsG0780036199.01.T01:CDS 35.0%
TAGAGTCTAATCCAAGACTT+AGG - Chr7:4617193-4617212 None:intergenic 35.0%
TAGCTCAGAAGAATTACCAA+AGG + Chr7:4617259-4617278 MsG0780036199.01.T01:intron 35.0%
TCACACCAATATCATCCATT+TGG + Chr7:4618658-4618677 MsG0780036199.01.T01:three_prime_UTR 35.0%
TCTTCAACTTCAACTTCCTT+TGG - Chr7:4617278-4617297 None:intergenic 35.0%
TGATCTTAGAGTTTGTGAAG+TGG + Chr7:4618043-4618062 MsG0780036199.01.T01:intron 35.0%
TGTGAAATTTGGTTGTTGTG+TGG - Chr7:4618643-4618662 None:intergenic 35.0%
TTCGTCACTAATTTGATGCT+AGG + Chr7:4617619-4617638 MsG0780036199.01.T01:intron 35.0%
! TAGGCCTTTTAATCATTTCC+AGG + Chr7:4618748-4618767 MsG0780036199.01.T01:three_prime_UTR 35.0%
! TTTAGACCATTGAGTTGTGT+TGG - Chr7:4618441-4618460 None:intergenic 35.0%
!! AGATGAATGATGGATGTCAA+TGG + Chr7:4617850-4617869 MsG0780036199.01.T01:intron 35.0%
AACTCACCAACACAACTCAA+TGG + Chr7:4618432-4618451 MsG0780036199.01.T01:CDS 40.0%
AAGGCAAAGTGACACAAACT+CGG - Chr7:4617084-4617103 None:intergenic 40.0%
ACATGTCATCAGCACATCTT+TGG - Chr7:4618241-4618260 None:intergenic 40.0%
ACTCATTTGGACTTCTTCCA+AGG - Chr7:4617103-4617122 None:intergenic 40.0%
AGAAGATTCAAAACCCTACG+AGG - Chr7:4619313-4619332 None:intergenic 40.0%
AGAGGATCTAATTTCCTCGT+AGG + Chr7:4619296-4619315 MsG0780036199.01.T01:three_prime_UTR 40.0%
AGCTAAATGTGATACTCCCA+CGG + Chr7:4617401-4617420 MsG0780036199.01.T01:intron 40.0%
AGCTGAAGTTGTATATGCCA+TGG - Chr7:4618324-4618343 None:intergenic 40.0%
CAAGTTATCAAACCCCTTCA+AGG + Chr7:4618801-4618820 MsG0780036199.01.T01:three_prime_UTR 40.0%
CTGCTCTTAGAGACAGAAAA+TGG - Chr7:4619125-4619144 None:intergenic 40.0%
GAGACAGAAAATGGCAATGA+AGG - Chr7:4619116-4619135 None:intergenic 40.0%
GAGGATCTAATTTCCTCGTA+GGG + Chr7:4619297-4619316 MsG0780036199.01.T01:three_prime_UTR 40.0%
GATCCTCCACTGATGTTATA+TGG + Chr7:4619241-4619260 MsG0780036199.01.T01:three_prime_UTR 40.0%
GATCCTCTACCATTGTTGTA+TGG - Chr7:4619284-4619303 None:intergenic 40.0%
GCTATAACTGAGTGAAGACT+TGG - Chr7:4618869-4618888 None:intergenic 40.0%
GGATGTCAATGGAGGAAATA+TGG + Chr7:4617861-4617880 MsG0780036199.01.T01:CDS 40.0%
GGTAAACAATCTTCTCCAAG+CGG + Chr7:4618068-4618087 MsG0780036199.01.T01:intron 40.0%
GTACCATATAACATCAGTGG+AGG - Chr7:4619247-4619266 None:intergenic 40.0%
GTAGGACAAGGATCAAACAA+TGG + Chr7:4618908-4618927 MsG0780036199.01.T01:three_prime_UTR 40.0%
GTCAAAGAAACGAAGCTGAA+GGG - Chr7:4616987-4617006 None:intergenic 40.0%
GTTAGGTCAAGAGTGATTGT+TGG - Chr7:4618543-4618562 None:intergenic 40.0%
TCTTCAATCTCTGAACTGCT+AGG - Chr7:4615900-4615919 None:intergenic 40.0%
TGATTGCTCTACTGAACAAG+AGG + Chr7:4615956-4615975 MsG0780036199.01.T01:CDS 40.0%
TGTCAAAGAAACGAAGCTGA+AGG - Chr7:4616988-4617007 None:intergenic 40.0%
! ACTTGGTGAGTATCCTCAAA+TGG + Chr7:4618984-4619003 MsG0780036199.01.T01:three_prime_UTR 40.0%
! CTGATGCTGTTACTTGAAGA+GGG - Chr7:4618301-4618320 None:intergenic 40.0%
! GAAACTCTGACTCTTTTAGC+AGG - Chr7:4617375-4617394 None:intergenic 40.0%
! GCAGGGTTGAATTTGAAACT+TGG + Chr7:4618967-4618986 MsG0780036199.01.T01:three_prime_UTR 40.0%
! GTTGGTGAGTTTCCAAAATG+TGG - Chr7:4618423-4618442 None:intergenic 40.0%
!! TGAATGATGGATGTCAATGG+AGG + Chr7:4617853-4617872 MsG0780036199.01.T01:CDS 40.0%
AGAGAGAATGGTTTAGGTGC+AGG + Chr7:4618949-4618968 MsG0780036199.01.T01:three_prime_UTR 45.0%
AGGCAAAGTGACACAAACTC+GGG - Chr7:4617083-4617102 None:intergenic 45.0%
ATTCAACGACTTGTCGTCAG+TGG - Chr7:4619356-4619375 None:intergenic 45.0%
CGATAGTATGCTCTTGGACA+TGG - Chr7:4617909-4617928 None:intergenic 45.0%
CTGACTGCACCATACAACAA+TGG + Chr7:4619272-4619291 MsG0780036199.01.T01:three_prime_UTR 45.0%
CTTAGAGTTTGTGAAGTGGG+TGG + Chr7:4618047-4618066 MsG0780036199.01.T01:intron 45.0%
GAGAGAATGGTTTAGGTGCA+GGG + Chr7:4618950-4618969 MsG0780036199.01.T01:three_prime_UTR 45.0%
GCACCATACAACAATGGTAG+AGG + Chr7:4619278-4619297 MsG0780036199.01.T01:three_prime_UTR 45.0%
GCAGCATCAATGATGGTATC+AGG + Chr7:4618344-4618363 MsG0780036199.01.T01:CDS 45.0%
GGACAAGGATCAAACAATGG+TGG + Chr7:4618911-4618930 MsG0780036199.01.T01:three_prime_UTR 45.0%
GTGCAACGATAGTATGCTCT+TGG - Chr7:4617915-4617934 None:intergenic 45.0%
TCAAGTAACAGCATCAGCCA+TGG + Chr7:4618304-4618323 MsG0780036199.01.T01:CDS 45.0%
TTCAGCTGCAGCATCAATGA+TGG + Chr7:4618337-4618356 MsG0780036199.01.T01:CDS 45.0%
! GCTGATGCTGTTACTTGAAG+AGG - Chr7:4618302-4618321 None:intergenic 45.0%
! GTTTCGTCGATTGTAGGACA+AGG + Chr7:4618896-4618915 MsG0780036199.01.T01:three_prime_UTR 45.0%
!! GAGTTTGTGTCACTTTGCCT+TGG + Chr7:4617083-4617102 MsG0780036199.01.T01:CDS 45.0%
!! ATAAAAAATTTAAATAATGA+TGG - Chr7:4617699-4617718 None:intergenic 5.0%
AACCCCTTCAAGGCAAGCTT+TGG + Chr7:4618811-4618830 MsG0780036199.01.T01:three_prime_UTR 50.0%
ACTTGTCGTCAGTGGCTACA+TGG - Chr7:4619348-4619367 None:intergenic 50.0%
AGCATGCCCAGTTAGGAAAC+AGG + Chr7:4617944-4617963 MsG0780036199.01.T01:CDS 50.0%
AGCCAAAGCTTGCCTTGAAG+GGG - Chr7:4618816-4618835 None:intergenic 50.0%
ATCGGTGTGTTCTATCCGCT+TGG - Chr7:4618086-4618105 None:intergenic 50.0%
CAGCCAAAGCTTGCCTTGAA+GGG - Chr7:4618817-4618836 None:intergenic 50.0%
TCAGCCAAAGCTTGCCTTGA+AGG - Chr7:4618818-4618837 None:intergenic 50.0%
TGTTTCCTAACTGGGCATGC+TGG - Chr7:4617945-4617964 None:intergenic 50.0%
! GCTGCAGTTTCGTCGATTGT+AGG + Chr7:4618890-4618909 MsG0780036199.01.T01:three_prime_UTR 50.0%
TTGCACCAGCATGCCCAGTT+AGG + Chr7:4617937-4617956 MsG0780036199.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 4615850 4619383 4615850 ID=MsG0780036199.01;Name=MsG0780036199.01
Chr7 mRNA 4615850 4619383 4615850 ID=MsG0780036199.01.T01;Parent=MsG0780036199.01;Name=MsG0780036199.01.T01;_AED=0.27;_eAED=0.28;_QI=30|0.33|0.75|1|1|1|4|902|231
Chr7 exon 4615850 4615986 4615850 ID=MsG0780036199.01.T01:exon:2584;Parent=MsG0780036199.01.T01
Chr7 exon 4616992 4617220 4616992 ID=MsG0780036199.01.T01:exon:2585;Parent=MsG0780036199.01.T01
Chr7 exon 4617852 4617965 4617852 ID=MsG0780036199.01.T01:exon:2586;Parent=MsG0780036199.01.T01
Chr7 exon 4618236 4619383 4618236 ID=MsG0780036199.01.T01:exon:2587;Parent=MsG0780036199.01.T01
Chr7 five_prime_UTR 4615850 4615879 4615850 ID=MsG0780036199.01.T01:five_prime_utr;Parent=MsG0780036199.01.T01
Chr7 CDS 4615880 4615986 4615880 ID=MsG0780036199.01.T01:cds;Parent=MsG0780036199.01.T01
Chr7 CDS 4616992 4617220 4616992 ID=MsG0780036199.01.T01:cds;Parent=MsG0780036199.01.T01
Chr7 CDS 4617852 4617965 4617852 ID=MsG0780036199.01.T01:cds;Parent=MsG0780036199.01.T01
Chr7 CDS 4618236 4618481 4618236 ID=MsG0780036199.01.T01:cds;Parent=MsG0780036199.01.T01
Chr7 three_prime_UTR 4618482 4619383 4618482 ID=MsG0780036199.01.T01:three_prime_utr;Parent=MsG0780036199.01.T01
Gene Sequence

>MsG0780036199.01.T01

ATGTCAAAAATGTCGATCCTAGCAGTTCAGAGATTGAAGAGAAAAGAGTTACTTCAATTATCCATGAAGTTGAAGTTGATTGCTCTACTGAACAAGAGGTTACAAAGCTTCGTTTCTTTGACATTGTTAACAAAGACTTCTATGAAAGATATAGAAGATTCGTCAACTAATTCACACGAAGAAATCGATGAAGAACCCGAGTTTGTGTCACTTTGCCTTGGAAGAAGTCCAAATGAGTATAAGAAAGAAGCAAAAAACATTGAAAACCCTAACAAACCTAAAGAGAAAGAAGATATGGAAGTTAACCTAAGTCTTGGATTAGACTCTAAATATATGATGAATGATGGATGTCAATGGAGGAAATATGGACAAAAGATAGCAAAAGGAAATCCATGTCCAAGAGCATACTATCGTTGCACAGTTGCACCAGCATGCCCAGTTAGGAAACAGGTCCAAAGATGTGCTGATGACATGTCAATCTTAATCACAACATATGAAGGAACACACAATCACCCTCTTCAAGTAACAGCATCAGCCATGGCATATACAACTTCAGCTGCAGCATCAATGATGGTATCAGGTTCATCAACATCATCATCATCACATCAAAATCAAAATGTTCATCACAACAATTCCACATTTTGGAAACTCACCAACACAACTCAATGGTCTAAATTTCAATCATCACCAATATGA

Protein sequence

>MsG0780036199.01.T01

MSKMSILAVQRLKRKELLQLSMKLKLIALLNKRLQSFVSLTLLTKTSMKDIEDSSTNSHEEIDEEPEFVSLCLGRSPNEYKKEAKNIENPNKPKEKEDMEVNLSLGLDSKYMMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDMSILITTYEGTHNHPLQVTASAMAYTTSAAASMMVSGSSTSSSSHQNQNVHHNNSTFWKLTNTTQWSKFQSSPI*