AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046921.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046921.01.T01 MTR_4g117170 73.099 171 3 1 1 171 1 128 6.54e-82 241
MsG0880046921.01.T01 MTR_4g117120 46.552 174 36 4 1 172 1 119 1.31e-36 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046921.01.T01 AT3G23610 42.771 166 52 1 7 172 20 142 2.20e-42 139
MsG0880046921.01.T01 AT3G23610 42.424 165 52 1 7 171 20 141 3.85e-41 138
MsG0880046921.01.T01 AT3G23610 42.424 165 52 1 7 171 20 141 4.40e-41 138
MsG0880046921.01.T01 AT3G23610 42.424 165 52 1 7 171 20 141 4.64e-41 138
MsG0880046921.01.T01 AT3G23610 42.424 165 52 1 7 171 20 141 4.83e-41 138
MsG0880046921.01.T01 AT3G23610 42.424 165 52 1 7 171 20 141 1.07e-40 137
MsG0880046921.01.T01 AT3G06110 40.152 132 36 1 40 171 27 115 9.65e-25 95.1
MsG0880046921.01.T01 AT3G06110 40.152 132 36 1 40 171 27 115 9.65e-25 95.1
MsG0880046921.01.T01 AT3G06110 35.606 132 32 1 40 171 27 105 1.67e-16 73.6

Find 29 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGGTTAGGGTTTGTTTC+TGG 0.047091 8:+79947107 MsG0880046921.01.T01:intron
AGTAAACTACCTGGTCAATT+TGG 0.246911 8:-79947025 None:intergenic
AACACTTCCACCATTGCTTT+TGG 0.274942 8:-79948306 None:intergenic
TTTGGTTAGGGTTTGTTTCT+GGG 0.275943 8:+79947108 MsG0880046921.01.T01:intron
AAGCAATGGTGGAAGTGTTT+TGG 0.334267 8:+79948310 MsG0880046921.01.T01:CDS
ACAAAAGTGCAACTTTAGTA+TGG 0.339844 8:-79948201 None:intergenic
TGTGAAGACATCGAAGTGTC+TGG 0.378386 8:+79949902 MsG0880046921.01.T01:intron
AGGAATATTATCCTCTTTCA+AGG 0.387832 8:-79947000 None:intergenic
TTTGAATAAATCCTTGAAAG+AGG 0.426736 8:+79946989 MsG0880046921.01.T01:CDS
GGTTTGTTTCTGGGTTCTGT+TGG 0.436373 8:+79947117 MsG0880046921.01.T01:CDS
TTCGTCTATAAAGTTATAGA+TGG 0.457746 8:+79947231 MsG0880046921.01.T01:CDS
TATAACTTTATAGACGAAAT+CGG 0.461496 8:-79947226 None:intergenic
ACGAAATCGGCAGGATGGGC+AGG 0.481636 8:-79947213 None:intergenic
AAACCTGTCAGTGTCATGTC+TGG 0.501987 8:-79947295 None:intergenic
GGTTCTGCTACGAACAAGGT+TGG 0.535751 8:+79947138 MsG0880046921.01.T01:CDS
TGTTGGTTCTGCTACGAACA+AGG 0.539637 8:+79947134 MsG0880046921.01.T01:CDS
TATAGACGAAATCGGCAGGA+TGG 0.543693 8:-79947218 None:intergenic
ACACCAGACATGACACTGAC+AGG 0.543872 8:+79947292 MsG0880046921.01.T01:CDS
ATTGATGAAGCCAAAAGCAA+TGG 0.548070 8:+79948296 MsG0880046921.01.T01:CDS
ATAGACGAAATCGGCAGGAT+GGG 0.557973 8:-79947217 None:intergenic
GTGAAGACATCGAAGTGTCT+GGG 0.563144 8:+79949903 MsG0880046921.01.T01:intron
ACTTTATAGACGAAATCGGC+AGG 0.565177 8:-79947222 None:intergenic
TATTCCTTGCCAAATTGACC+AGG 0.585093 8:+79947016 MsG0880046921.01.T01:CDS
GATGAAGCCAAAAGCAATGG+TGG 0.607851 8:+79948299 MsG0880046921.01.T01:CDS
TGAGGAAGTTGCTGACAAAG+AGG 0.622131 8:+79948232 MsG0880046921.01.T01:CDS
ACTACCTGGTCAATTTGGCA+AGG 0.624601 8:-79947020 None:intergenic
ATTGTTATGCTGGAAGATCG+AGG 0.636570 8:+79948336 MsG0880046921.01.T01:CDS
AACATGATGTTGATCAGACA+AGG 0.651098 8:+79949931 MsG0880046921.01.T01:CDS
GTTATGCTGGAAGATCGAGG+AGG 0.814989 8:+79948339 MsG0880046921.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+TGG - Chr8:79949126-79949107 None:intergenic 0.0%
!!! CATCTTAAATATATTTTAAA+TGG + Chr8:79949193-79949212 MsG0880046921.01.T01:intron 10.0%
!! AAATAAAGATGAATGTTATT+TGG + Chr8:79947090-79947109 MsG0880046921.01.T01:intron 15.0%
!! ATATATATATTGGTATGTTA+AGG - Chr8:79949097-79949116 None:intergenic 15.0%
!! TACAATTTACTATAGATATA+TGG - Chr8:79947980-79947999 None:intergenic 15.0%
!!! AAATCATAAATGTATTTTGA+TGG - Chr8:79949239-79949258 None:intergenic 15.0%
!!! AATATCTAAATTTTAATGCA+TGG + Chr8:79949616-79949635 MsG0880046921.01.T01:intron 15.0%
!!! AATCATATCTGTAATTTTAA+AGG - Chr8:79948443-79948462 None:intergenic 15.0%
!!! ATCATATCTGTAATTTTAAA+GGG - Chr8:79948442-79948461 None:intergenic 15.0%
!!! TATAGTAAATTGTATTTTGT+AGG + Chr8:79947986-79948005 MsG0880046921.01.T01:intron 15.0%
!! AAACAATTAGATACAATCAA+TGG - Chr8:79949881-79949900 None:intergenic 20.0%
!! AAAGAAATAACGTTAAAGTA+GGG + Chr8:79947552-79947571 MsG0880046921.01.T01:intron 20.0%
!! ATAGTAACAATAATGTTTAG+TGG - Chr8:79949396-79949415 None:intergenic 20.0%
!! ATTATCAATTTCCATGTTTA+TGG + Chr8:79947488-79947507 MsG0880046921.01.T01:intron 20.0%
!! TAAAGAAATAACGTTAAAGT+AGG + Chr8:79947551-79947570 MsG0880046921.01.T01:intron 20.0%
!! TATAACTTTATAGACGAAAT+CGG - Chr8:79947229-79947248 None:intergenic 20.0%
!! TGCATATTGTATTTAATGTA+AGG + Chr8:79947522-79947541 MsG0880046921.01.T01:intron 20.0%
!!! AATTTTTATTTTGGTGACAA+TGG + Chr8:79947648-79947667 MsG0880046921.01.T01:intron 20.0%
!!! ACAAATTGCATTAATTTTGA+AGG + Chr8:79946959-79946978 MsG0880046921.01.T01:CDS 20.0%
!!! ACTCTAATTTTGAGTTTTTT+AGG + Chr8:79948160-79948179 MsG0880046921.01.T01:intron 20.0%
!!! GGAAATTGATAATATCAATA+AGG - Chr8:79947481-79947500 None:intergenic 20.0%
! AAACGCTTTATAGTATGAAT+TGG + Chr8:79948603-79948622 MsG0880046921.01.T01:intron 25.0%
! AATATGACCATTAAAAAAGG+AGG - Chr8:79948798-79948817 None:intergenic 25.0%
! ACAAGGTTAATCTAATGAAA+CGG - Chr8:79948374-79948393 None:intergenic 25.0%
! ACATCTATTATAAAGCTATC+TGG - Chr8:79948013-79948032 None:intergenic 25.0%
! ACTCAAATAATCCATAAACA+TGG - Chr8:79947502-79947521 None:intergenic 25.0%
! TCCAATATGACCATTAAAAA+AGG - Chr8:79948801-79948820 None:intergenic 25.0%
! TTAATGCAATTCTGTCAAAA+TGG + Chr8:79949657-79949676 MsG0880046921.01.T01:intron 25.0%
! TTCGTCTATAAAGTTATAGA+TGG + Chr8:79947231-79947250 MsG0880046921.01.T01:CDS 25.0%
! TTTACACTAGTAAATGGATA+GGG + Chr8:79947315-79947334 MsG0880046921.01.T01:intron 25.0%
! TTTGAATAAATCCTTGAAAG+AGG + Chr8:79946989-79947008 MsG0880046921.01.T01:CDS 25.0%
!! AAATTAGAACCAAGTTTTTC+TGG - Chr8:79948882-79948901 None:intergenic 25.0%
!! AAGATGAATGTTATTTGGTT+AGG + Chr8:79947095-79947114 MsG0880046921.01.T01:intron 25.0%
!! AGATGAATGTTATTTGGTTA+GGG + Chr8:79947096-79947115 MsG0880046921.01.T01:intron 25.0%
!! ATTATGTCCTTGTTTACTTT+GGG + Chr8:79948728-79948747 MsG0880046921.01.T01:intron 25.0%
!! GATCTTTAAAAGTTTAGCAT+GGG + Chr8:79947740-79947759 MsG0880046921.01.T01:intron 25.0%
!! TGATCTTTAAAAGTTTAGCA+TGG + Chr8:79947739-79947758 MsG0880046921.01.T01:intron 25.0%
!!! AAGCATATATGCTCATTTTT+CGG + Chr8:79949539-79949558 MsG0880046921.01.T01:intron 25.0%
!!! CAATTATAAAAGCATCAACA+AGG - Chr8:79948391-79948410 None:intergenic 25.0%
!!! CGGGTATGTAATTTTTATTT+TGG + Chr8:79947639-79947658 MsG0880046921.01.T01:intron 25.0%
!!! TAAATGTATTTTGATGGCTA+TGG - Chr8:79949233-79949252 None:intergenic 25.0%
!!! TCCTTTTTTAATGGTCATAT+TGG + Chr8:79948797-79948816 MsG0880046921.01.T01:intron 25.0%
!!! TTTACTACCTCCTTTTTTAA+TGG + Chr8:79948788-79948807 MsG0880046921.01.T01:intron 25.0%
!!! TTTGAAGTGTTGTTTTAAGT+TGG - Chr8:79948261-79948280 None:intergenic 25.0%
AACTTTAATGACAAGCAACA+TGG - Chr8:79948119-79948138 None:intergenic 30.0%
AATACGTAGAGTTCAAAGTT+AGG + Chr8:79948679-79948698 MsG0880046921.01.T01:intron 30.0%
AGGAATATTATCCTCTTTCA+AGG - Chr8:79947003-79947022 None:intergenic 30.0%
ATACGTAGAGTTCAAAGTTA+GGG + Chr8:79948680-79948699 MsG0880046921.01.T01:intron 30.0%
ATACTGCTGTTCTGTTTATA+TGG + Chr8:79949746-79949765 MsG0880046921.01.T01:intron 30.0%
ATTAGTGAAGAAAATGAAGG+GGG - Chr8:79949776-79949795 None:intergenic 30.0%
CATGGTAAAGGAAGTAAAAA+GGG + Chr8:79949358-79949377 MsG0880046921.01.T01:intron 30.0%
CATTAGTGAAGAAAATGAAG+GGG - Chr8:79949777-79949796 None:intergenic 30.0%
CATTGAATGACTAATGTACA+TGG + Chr8:79947373-79947392 MsG0880046921.01.T01:intron 30.0%
CCATTAGTGAAGAAAATGAA+GGG - Chr8:79949778-79949797 None:intergenic 30.0%
GTTGTACTAGAAAGATGATT+TGG + Chr8:79947439-79947458 MsG0880046921.01.T01:intron 30.0%
GTTTACACTAGTAAATGGAT+AGG + Chr8:79947314-79947333 MsG0880046921.01.T01:intron 30.0%
TATCGAGAACAAAAGAAATG+TGG - Chr8:79949804-79949823 None:intergenic 30.0%
TCCATTAGTGAAGAAAATGA+AGG - Chr8:79949779-79949798 None:intergenic 30.0%
TTAAAGATCAAAGCACACAA+TGG - Chr8:79947729-79947748 None:intergenic 30.0%
TTAGACTAACCAGAAAAACT+TGG + Chr8:79948870-79948889 MsG0880046921.01.T01:intron 30.0%
! ACAAAAGTGCAACTTTAGTA+TGG - Chr8:79948204-79948223 None:intergenic 30.0%
! GATTATGTCCTTGTTTACTT+TGG + Chr8:79948727-79948746 MsG0880046921.01.T01:intron 30.0%
! TACTAAAGTTGCACTTTTGT+TGG + Chr8:79948204-79948223 MsG0880046921.01.T01:CDS 30.0%
AACATGATGTTGATCAGACA+AGG + Chr8:79949931-79949950 MsG0880046921.01.T01:CDS 35.0%
AGTAAACTACCTGGTCAATT+TGG - Chr8:79947028-79947047 None:intergenic 35.0%
ATGTGACCAGATGCAATATA+AGG + Chr8:79947403-79947422 MsG0880046921.01.T01:intron 35.0%
ATTGATGAAGCCAAAAGCAA+TGG + Chr8:79948296-79948315 MsG0880046921.01.T01:CDS 35.0%
GAACAATGCACTTCAATTGT+TGG - Chr8:79948566-79948585 None:intergenic 35.0%
GACAGGTTTACACTAGTAAA+TGG + Chr8:79947309-79947328 MsG0880046921.01.T01:intron 35.0%
GCATGATTAAGTAAACTACC+TGG - Chr8:79947037-79947056 None:intergenic 35.0%
GCATGGTAAAGGAAGTAAAA+AGG + Chr8:79949357-79949376 MsG0880046921.01.T01:intron 35.0%
TAACGTTAAAGTAGGGCAAA+AGG + Chr8:79947559-79947578 MsG0880046921.01.T01:intron 35.0%
! ATTTGGTTAGGGTTTGTTTC+TGG + Chr8:79947107-79947126 MsG0880046921.01.T01:intron 35.0%
! CCCTTCATTTTCTTCACTAA+TGG + Chr8:79949775-79949794 MsG0880046921.01.T01:intron 35.0%
! CTTTTATAATTGAGTGCCCT+GGG + Chr8:79948399-79948418 MsG0880046921.01.T01:intron 35.0%
! GACTTTGAGAAATCTCTTCA+AGG + Chr8:79949040-79949059 MsG0880046921.01.T01:intron 35.0%
! GCACTTTTGTTGGAAAATTG+AGG + Chr8:79948214-79948233 MsG0880046921.01.T01:CDS 35.0%
! TTTGGTTAGGGTTTGTTTCT+GGG + Chr8:79947108-79947127 MsG0880046921.01.T01:intron 35.0%
! TTTTATAATTGAGTGCCCTG+GGG + Chr8:79948400-79948419 MsG0880046921.01.T01:intron 35.0%
!! AGCTTCATGGGTTTTTCAAA+TGG + Chr8:79949680-79949699 MsG0880046921.01.T01:intron 35.0%
!! AGTTTTACAGAACACCGATT+AGG + Chr8:79947609-79947628 MsG0880046921.01.T01:intron 35.0%
!!! GTTTTGGTTCATTGTTATGC+TGG + Chr8:79948326-79948345 MsG0880046921.01.T01:CDS 35.0%
!!! TGTTACTCACATTTTGACTG+TGG + Chr8:79947176-79947195 MsG0880046921.01.T01:CDS 35.0%
ACACAATGGTAATCGAGTCA+GGG - Chr8:79947715-79947734 None:intergenic 40.0%
ACTTTATAGACGAAATCGGC+AGG - Chr8:79947225-79947244 None:intergenic 40.0%
ATTGTTATGCTGGAAGATCG+AGG + Chr8:79948336-79948355 MsG0880046921.01.T01:CDS 40.0%
CTGTCAAAATGGAGCTTCAT+GGG + Chr8:79949668-79949687 MsG0880046921.01.T01:intron 40.0%
GTTAAAGTAGGGCAAAAGGA+AGG + Chr8:79947563-79947582 MsG0880046921.01.T01:intron 40.0%
TAGTACTCGACACATCCAAT+AGG - Chr8:79947907-79947926 None:intergenic 40.0%
TATTCCTTGCCAAATTGACC+AGG + Chr8:79947016-79947035 MsG0880046921.01.T01:CDS 40.0%
TCACATGCCCAAAGTAAACA+AGG - Chr8:79948738-79948757 None:intergenic 40.0%
TCTGTCAAAATGGAGCTTCA+TGG + Chr8:79949667-79949686 MsG0880046921.01.T01:intron 40.0%
TGACTAATGAAACCGCGATT+TGG - Chr8:79949013-79949032 None:intergenic 40.0%
TGGCATATCTGATGAAGTCT+CGG + Chr8:79948930-79948949 MsG0880046921.01.T01:intron 40.0%
TTTATAATTGAGTGCCCTGG+GGG + Chr8:79948401-79948420 MsG0880046921.01.T01:intron 40.0%
! AACACTTCCACCATTGCTTT+TGG - Chr8:79948309-79948328 None:intergenic 40.0%
! GCTTTTATAATTGAGTGCCC+TGG + Chr8:79948398-79948417 MsG0880046921.01.T01:intron 40.0%
! TTTGATGGCTATGGCTATAG+AGG - Chr8:79949224-79949243 None:intergenic 40.0%
!!! AAGCAATGGTGGAAGTGTTT+TGG + Chr8:79948310-79948329 MsG0880046921.01.T01:CDS 40.0%
AAACCTGTCAGTGTCATGTC+TGG - Chr8:79947298-79947317 None:intergenic 45.0%
AAAGTAGGGCAAAAGGAAGG+AGG + Chr8:79947566-79947585 MsG0880046921.01.T01:intron 45.0%
AAGTAGGGCAAAAGGAAGGA+GGG + Chr8:79947567-79947586 MsG0880046921.01.T01:intron 45.0%
AATGATGTCACACTGGAAGG+TGG - Chr8:79948909-79948928 None:intergenic 45.0%
AATGGTAATCGAGTCAGGGT+CGG - Chr8:79947711-79947730 None:intergenic 45.0%
ACTACCTGGTCAATTTGGCA+AGG - Chr8:79947023-79947042 None:intergenic 45.0%
ATAGACGAAATCGGCAGGAT+GGG - Chr8:79947220-79947239 None:intergenic 45.0%
ATGCCACAATGATGTCACAC+TGG - Chr8:79948916-79948935 None:intergenic 45.0%
CACAATGATGTCACACTGGA+AGG - Chr8:79948912-79948931 None:intergenic 45.0%
CACACAATGGTAATCGAGTC+AGG - Chr8:79947716-79947735 None:intergenic 45.0%
CACTACTCGACACTTCAGAT+AGG + Chr8:79947775-79947794 MsG0880046921.01.T01:intron 45.0%
CTTCCAGTGTGACATCATTG+TGG + Chr8:79948910-79948929 MsG0880046921.01.T01:intron 45.0%
GATGAAGCCAAAAGCAATGG+TGG + Chr8:79948299-79948318 MsG0880046921.01.T01:CDS 45.0%
GCATATCTGATGAAGTCTCG+GGG + Chr8:79948932-79948951 MsG0880046921.01.T01:intron 45.0%
GCTCGACCTTATATTGCATC+TGG - Chr8:79947412-79947431 None:intergenic 45.0%
GGCATATCTGATGAAGTCTC+GGG + Chr8:79948931-79948950 MsG0880046921.01.T01:intron 45.0%
GTAATCTAGCAGAGTGTGCA+TGG + Chr8:79949340-79949359 MsG0880046921.01.T01:intron 45.0%
GTGACAATGGTGCGTGTTTA+GGG + Chr8:79947661-79947680 MsG0880046921.01.T01:intron 45.0%
TAGCAGAGTGTGCATGGTAA+AGG + Chr8:79949346-79949365 MsG0880046921.01.T01:intron 45.0%
TATAGACGAAATCGGCAGGA+TGG - Chr8:79947221-79947240 None:intergenic 45.0%
TCTCTCTCTCTCTCTCCTAT+TGG + Chr8:79947889-79947908 MsG0880046921.01.T01:intron 45.0%
TGAGGAAGTTGCTGACAAAG+AGG + Chr8:79948232-79948251 MsG0880046921.01.T01:CDS 45.0%
! ACAGAACACCGATTAGGACA+GGG + Chr8:79947615-79947634 MsG0880046921.01.T01:intron 45.0%
! ATGAGAGTGCACAGCATTTG+AGG + Chr8:79948092-79948111 MsG0880046921.01.T01:intron 45.0%
! GTGAAGACATCGAAGTGTCT+GGG + Chr8:79949903-79949922 MsG0880046921.01.T01:intron 45.0%
! TACAGAACACCGATTAGGAC+AGG + Chr8:79947614-79947633 MsG0880046921.01.T01:intron 45.0%
! TGTGAAGACATCGAAGTGTC+TGG + Chr8:79949902-79949921 MsG0880046921.01.T01:intron 45.0%
!! CTATCTGAAGTGTCGAGTAG+TGG - Chr8:79947777-79947796 None:intergenic 45.0%
!! GGTTTGTTTCTGGGTTCTGT+TGG + Chr8:79947117-79947136 MsG0880046921.01.T01:CDS 45.0%
!! TGTTGGTTCTGCTACGAACA+AGG + Chr8:79947134-79947153 MsG0880046921.01.T01:CDS 45.0%
!!! ACTCACATTTTGACTGTGGC+TGG + Chr8:79947180-79947199 MsG0880046921.01.T01:CDS 45.0%
!!! CTCACATTTTGACTGTGGCT+GGG + Chr8:79947181-79947200 MsG0880046921.01.T01:CDS 45.0%
!! AAAAAAAAATTATAAAAGAA+AGG - Chr8:79949593-79949612 None:intergenic 5.0%
AAATGTTAGCAAGTGCCCCC+AGG - Chr8:79948419-79948438 None:intergenic 50.0%
AATGTTAGCAAGTGCCCCCA+GGG - Chr8:79948418-79948437 None:intergenic 50.0%
ACAATGGTGCGTGTTTAGGG+AGG + Chr8:79947664-79947683 MsG0880046921.01.T01:intron 50.0%
ACACCAGACATGACACTGAC+AGG + Chr8:79947292-79947311 MsG0880046921.01.T01:CDS 50.0%
ATACCCGACCCTGTCCTAAT+CGG - Chr8:79947626-79947645 None:intergenic 50.0%
GGTGACAATGGTGCGTGTTT+AGG + Chr8:79947660-79947679 MsG0880046921.01.T01:intron 50.0%
GGTTCTGCTACGAACAAGGT+TGG + Chr8:79947138-79947157 MsG0880046921.01.T01:CDS 50.0%
GTGTCGAGTACTAGAGAGAG+AGG + Chr8:79947914-79947933 MsG0880046921.01.T01:intron 50.0%
GTTATGCTGGAAGATCGAGG+AGG + Chr8:79948339-79948358 MsG0880046921.01.T01:CDS 50.0%
TCGCGGTTTCATTAGTCAGC+TGG + Chr8:79949015-79949034 MsG0880046921.01.T01:intron 50.0%
! AACACCGATTAGGACAGGGT+CGG + Chr8:79947619-79947638 MsG0880046921.01.T01:intron 50.0%
AAAAGGAAGGAGGGAAGCGG+CGG + Chr8:79947576-79947595 MsG0880046921.01.T01:intron 55.0%
ATGGTGCGTGTTTAGGGAGG+CGG + Chr8:79947667-79947686 MsG0880046921.01.T01:intron 55.0%
CCACAAGCAGCTCCAAATCG+CGG + Chr8:79948998-79949017 MsG0880046921.01.T01:intron 55.0%
GGCAAAAGGAAGGAGGGAAG+CGG + Chr8:79947573-79947592 MsG0880046921.01.T01:intron 55.0%
! ACACCGATTAGGACAGGGTC+GGG + Chr8:79947620-79947639 MsG0880046921.01.T01:intron 55.0%
ACGAAATCGGCAGGATGGGC+AGG - Chr8:79947216-79947235 None:intergenic 60.0%
TGGTGCGTGTTTAGGGAGGC+GGG + Chr8:79947668-79947687 MsG0880046921.01.T01:intron 60.0%
! CCGCGATTTGGAGCTGCTTG+TGG - Chr8:79949001-79949020 None:intergenic 60.0%
AGGAGGGAAGCGGCGGTAGT+CGG + Chr8:79947583-79947602 MsG0880046921.01.T01:intron 65.0%
CGTGTTTAGGGAGGCGGGTC+AGG + Chr8:79947673-79947692 MsG0880046921.01.T01:intron 65.0%
GTTTAGGGAGGCGGGTCAGG+TGG + Chr8:79947676-79947695 MsG0880046921.01.T01:intron 65.0%
GGAGGGAAGCGGCGGTAGTC+GGG + Chr8:79947584-79947603 MsG0880046921.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 79946909 79949969 79946909 ID=MsG0880046921.01;Name=MsG0880046921.01
Chr8 mRNA 79946909 79949969 79946909 ID=MsG0880046921.01.T01;Parent=MsG0880046921.01;Name=MsG0880046921.01.T01;_AED=0.49;_eAED=0.64;_QI=0|0|0|1|0.66|0.75|4|0|191
Chr8 exon 79946909 79947037 79946909 ID=MsG0880046921.01.T01:exon:10176;Parent=MsG0880046921.01.T01
Chr8 exon 79947117 79947323 79947117 ID=MsG0880046921.01.T01:exon:10177;Parent=MsG0880046921.01.T01
Chr8 exon 79948182 79948360 79948182 ID=MsG0880046921.01.T01:exon:10178;Parent=MsG0880046921.01.T01
Chr8 exon 79949909 79949969 79949909 ID=MsG0880046921.01.T01:exon:10179;Parent=MsG0880046921.01.T01
Chr8 CDS 79946909 79947037 79946909 ID=MsG0880046921.01.T01:cds;Parent=MsG0880046921.01.T01
Chr8 CDS 79947117 79947323 79947117 ID=MsG0880046921.01.T01:cds;Parent=MsG0880046921.01.T01
Chr8 CDS 79948182 79948360 79948182 ID=MsG0880046921.01.T01:cds;Parent=MsG0880046921.01.T01
Chr8 CDS 79949909 79949969 79949909 ID=MsG0880046921.01.T01:cds;Parent=MsG0880046921.01.T01
Gene Sequence

>MsG0880046921.01.T01

ATGGCTACAACATCAGAAGCTATGAATGAATTCGACGAATCGATGAAGAAACAAATTGCATTAATTTTGAAGGTTGTGCTTTTGAATAAATCCTTGAAAGAGGATAATATTCCTTGCCAAATTGACCAGGGTTTGTTTCTGGGTTCTGTTGGTTCTGCTACGAACAAGGTTGGTTTGAAAAATGTCAATGTTACTCACATTTTGACTGTGGCTGGGAAACTTGCACCTGCCCATCCTGCCGATTTCGTCTATAAAGTTATAGATGGTATGTTTCTTTTATGTATTTCTTATTGCACTGACACAGACACCAGACATGACACTGACAGGTTTACACTAGCATGTAGTAGTACAATATCCATACTAAAGTTGCACTTTTGTTGGAAAATTGAGGAAGTTGCTGACAAAGAGGATACCAACTTAAAACAACACTTCAAAGAGTGTTTTGATTTTATTGATGAAGCCAAAAGCAATGGTGGAAGTGTTTTGGTTCATTGTTATGCTGGAAGATCGAGGAGACATCGAAGTGTCTGGGTAGAGAACATGATGTTGATCAGACAAGGTAGTGTAGATGATTAG
Protein sequence

>MsG0880046921.01.T01

MATTSEAMNEFDESMKKQIALILKVVLLNKSLKEDNIPCQIDQGLFLGSVGSATNKVGLKNVNVTHILTVAGKLAPAHPADFVYKVIDGMFLLCISYCTDTDTRHDTDRFTLACSSTISILKLHFCWKIEEVADKEDTNLKQHFKECFDFIDEAKSNGGSVLVHCYAGRSRRHRSVWVENMMLIRQGSVDD*