AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042053.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042053.01.T01 MTR_8g010360 87.546 538 13 2 1 484 1 538 0.0 957
MsG0880042053.01.T01 MTR_8g010360 87.287 527 13 2 1 473 1 527 0.0 935
MsG0880042053.01.T01 MTR_1g077190 37.339 233 96 4 301 483 508 740 2.91e-41 157
MsG0880042053.01.T01 MTR_1g077190 40.157 127 76 0 45 171 181 307 2.64e-20 94.7
MsG0880042053.01.T01 MTR_1g077190 37.339 233 96 4 301 483 514 746 3.71e-41 157
MsG0880042053.01.T01 MTR_1g077190 40.157 127 76 0 45 171 187 313 2.78e-20 94.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042053.01.T01 AT3G03560 47.092 533 199 8 19 484 5 521 1.35e-155 452
MsG0880042053.01.T01 AT5G08440 28.820 517 251 13 54 476 218 711 1.49e-55 197
MsG0880042053.01.T01 AT5G08440 29.151 518 249 14 54 476 218 712 8.31e-55 195
MsG0880042053.01.T01 AT5G08440 29.275 386 203 9 54 390 218 582 1.45e-41 158
MsG0880042053.01.T01 AT5G23490 36.052 233 96 6 301 483 323 552 8.23e-37 143
MsG0880042053.01.T01 AT5G23490 34.375 128 84 0 44 171 26 153 9.07e-18 86.7
MsG0880042053.01.T01 AT5G23490 36.052 233 96 6 301 483 492 721 1.45e-36 144
MsG0880042053.01.T01 AT5G23490 34.375 128 84 0 44 171 195 322 1.16e-17 86.7
MsG0880042053.01.T01 AT5G23490 36.283 226 92 5 301 476 492 715 4.40e-36 142
MsG0880042053.01.T01 AT5G23490 34.375 128 84 0 44 171 195 322 1.17e-17 86.7
MsG0880042053.01.T01 AT5G23510 34.884 215 94 4 312 482 84 296 7.98e-33 127
MsG0880042053.01.T01 AT5G23510 34.884 215 94 4 312 482 45 257 8.27e-33 126
MsG0880042053.01.T01 AT5G23510 34.928 209 90 4 312 476 45 251 3.89e-32 124
MsG0880042053.01.T01 AT5G23490 36.139 202 82 4 301 457 492 691 1.54e-31 129
MsG0880042053.01.T01 AT5G23490 34.375 128 84 0 44 171 195 322 9.60e-18 86.7

Find 116 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTCTCTTTGTATGTTTC+AGG 0.122947 8:+3180729 MsG0880042053.01.T01:CDS
CAGTACCACTTATCTTAATT+TGG 0.128038 8:-3183260 None:intergenic
AGATGGATTCTTCTGAAAAT+TGG 0.139385 8:+3183202 MsG0880042053.01.T01:intron
AACATTGTATTAAGTAAATT+AGG 0.154695 8:+3184943 MsG0880042053.01.T01:three_prime_UTR
TTACAGTATCATTTGATTAT+TGG 0.159888 8:+3184772 MsG0880042053.01.T01:three_prime_UTR
ATTCCCCAGCAAAATCTTAT+TGG 0.213616 8:+3179663 MsG0880042053.01.T01:CDS
CATGGTTTAATTGATCAAAT+TGG 0.263912 8:+3180453 MsG0880042053.01.T01:CDS
GCTTAACAACGATGAGATTC+AGG 0.273041 8:+3176616 MsG0880042053.01.T01:CDS
TGTTGGTGTTGTGGAATATT+TGG 0.276277 8:+3184801 MsG0880042053.01.T01:three_prime_UTR
CAATGTTACAATGTAATTTC+AGG 0.293802 8:-3185015 None:intergenic
CATTGTATTAATTACAGTTT+TGG 0.303454 8:+3185033 MsG0880042053.01.T01:three_prime_UTR
CTAGGATTGCTGGCAGAATA+TGG 0.304704 8:+3178412 MsG0880042053.01.T01:CDS
CAATGTTACAATGTAATTTC+AGG 0.316787 8:-3184927 None:intergenic
AGAATTGGAGAGTTAACTTC+TGG 0.339289 8:+3179427 MsG0880042053.01.T01:CDS
GTCATCTATGCTAGGATTGC+TGG 0.343886 8:+3178402 MsG0880042053.01.T01:CDS
TCATTATGAATGTGATTTGT+CGG 0.364696 8:-3179508 None:intergenic
CGGGCGTTCACTGTGCTTAG+AGG 0.366352 8:-3183625 None:intergenic
ATTCAGAAGGGTCAACTATC+AGG 0.369128 8:+3179764 MsG0880042053.01.T01:CDS
ACATTGTATTAAGTAAATTA+GGG 0.369307 8:+3184944 MsG0880042053.01.T01:three_prime_UTR
TGGGTTCGTGTCAGTGGGTT+CGG 0.372734 8:+3180831 MsG0880042053.01.T01:intron
TCAGTGGGTTCGGCATCTTC+AGG 0.373194 8:+3180841 MsG0880042053.01.T01:intron
GATGGATTCTTCTGAAAATT+GGG 0.373476 8:+3183203 MsG0880042053.01.T01:intron
TCACATTCATAATGAATTCA+TGG 0.378535 8:+3179516 MsG0880042053.01.T01:CDS
GAAATTCTCAAAGGACTTAT+CGG 0.383309 8:+3183302 MsG0880042053.01.T01:CDS
ATCTGCGGTGATGCTATTCC+TGG 0.388358 8:+3180670 MsG0880042053.01.T01:CDS
GGTCAAGGCTCAGAATTTCT+AGG 0.389100 8:+3176638 MsG0880042053.01.T01:CDS
CAAGAAATTCATGCAGATAA+TGG 0.393619 8:+3179451 MsG0880042053.01.T01:CDS
TGTATTCCAATGGACGATAA+AGG 0.424243 8:+3181074 MsG0880042053.01.T01:CDS
AGATTTCTAATGCTGCTGAT+AGG 0.437149 8:+3179787 MsG0880042053.01.T01:CDS
CTAGACTCACTTTCAAATCA+TGG 0.440697 8:-3177430 None:intergenic
TATCCTGTCATATTGCTCAT+TGG 0.450061 8:-3179705 None:intergenic
TAACCATGCTGTTGAAAGTC+CGG 0.453911 8:+3179474 MsG0880042053.01.T01:CDS
GATTGCTGTTTCTTGTATGA+AGG 0.459963 8:+3177086 MsG0880042053.01.T01:CDS
ACTCTATTCTTAAGACGATC+AGG 0.466194 8:+3183234 MsG0880042053.01.T01:CDS
ATTTGAAAATTCTCAATGCC+AGG 0.470912 8:-3180649 None:intergenic
CGCTCAGGACCTAGACACTA+TGG 0.471026 8:+3176858 MsG0880042053.01.T01:CDS
AAGATAGAATTACCTTACTC+TGG 0.474605 8:-3184183 None:intergenic
CACAGGTATTGGATGACAAA+AGG 0.477099 8:+3184664 MsG0880042053.01.T01:intron
ATAGAAGCTAAGAAAATGTA+AGG 0.485093 8:+3184867 MsG0880042053.01.T01:three_prime_UTR
TGCTGGCAGAATATGGTTTG+TGG 0.488103 8:+3178419 MsG0880042053.01.T01:CDS
GACTGCTTCCTCTGTTTCTG+AGG 0.488642 8:+3180554 MsG0880042053.01.T01:CDS
TCGTTGTTAAGCCCGCGCGA+AGG 0.490974 8:-3176605 None:intergenic
TATATGAACCCAGGTGTTAG+TGG 0.491039 8:+3179726 MsG0880042053.01.T01:CDS
CAAAGAGAAGTTCGACGGAC+TGG 0.491588 8:-3180718 None:intergenic
ATCAATTAAACCATGTTGGA+AGG 0.491708 8:-3180445 None:intergenic
CCTTCGAGCAAGATCATTAG+CGG 0.495375 8:-3177375 None:intergenic
TTTGATCAATTAAACCATGT+TGG 0.502162 8:-3180449 None:intergenic
ATTGGCATGCAAGAGAGAAC+TGG 0.504735 8:+3180471 MsG0880042053.01.T01:CDS
CGTTGTTAAGCCCGCGCGAA+GGG 0.508565 8:-3176604 None:intergenic
GGTGTTAGTGGTGATGTAAA+CGG 0.509141 8:+3179738 MsG0880042053.01.T01:CDS
TTCAGTATCCAACTATGTAA+AGG 0.509317 8:+3178462 MsG0880042053.01.T01:CDS
TGACGGCCTTTATCGTCCAT+TGG 0.510180 8:-3181080 None:intergenic
CTGTTAAAAGCCCTTCGCGC+GGG 0.513801 8:+3176594 MsG0880042053.01.T01:CDS
CTCTAAGCACAGTGAACGCC+CGG 0.517034 8:+3183626 MsG0880042053.01.T01:CDS
AATGGACGATAAAGGCCGTC+AGG 0.517378 8:+3181082 MsG0880042053.01.T01:CDS
CATGCGACTCTTCCAGAGTA+AGG 0.517936 8:+3184171 MsG0880042053.01.T01:CDS
AACCATGTTGGAAGGAAGAT+AGG 0.523000 8:-3180437 None:intergenic
GGCACTAGGCAGTACATTGA+AGG 0.524560 8:+3180866 MsG0880042053.01.T01:CDS
GAATTGGAGAGTTAACTTCT+GGG 0.530167 8:+3179428 MsG0880042053.01.T01:CDS
AACTACATACTCTGGATTCG+TGG 0.536633 8:-3181015 None:intergenic
AACCATGCTGTTGAAAGTCC+GGG 0.539042 8:+3179475 MsG0880042053.01.T01:CDS
ACAATTTGTGTTAACATGCT+CGG 0.539879 8:+3183588 MsG0880042053.01.T01:CDS
AGCATGACCACGGGTTGCCA+CGG 0.540991 8:+3184695 MsG0880042053.01.T01:exon
GGATACCAAATTAAGATAAG+TGG 0.543072 8:+3183255 MsG0880042053.01.T01:CDS
TAGACTCACTTTCAAATCAT+GGG 0.552734 8:-3177429 None:intergenic
AATGATCTTGCTCGAAGGAA+AGG 0.555271 8:+3177380 MsG0880042053.01.T01:CDS
CAAATCTTTCTAGATGGCCC+TGG 0.558170 8:+3180631 MsG0880042053.01.T01:intron
TTTACATCACCACTAACACC+TGG 0.560197 8:-3179735 None:intergenic
TATTGGATGACAAAAGGAAA+GGG 0.562151 8:+3184670 MsG0880042053.01.T01:CDS
CTGTCATATTGCTCATTGGT+TGG 0.564575 8:-3179701 None:intergenic
CAATCTGTTCACGAAGGGAG+AGG 0.565208 8:-3177068 None:intergenic
ATGTAAACGGAGCATTCAGA+AGG 0.570272 8:+3179751 MsG0880042053.01.T01:CDS
TCGGCTGTAACTACATACTC+TGG 0.571630 8:-3181023 None:intergenic
TGAGAAATGCAAACTAGAGA+GGG 0.576355 8:+3177203 MsG0880042053.01.T01:CDS
GGCATCTTCAGGATGGCACT+AGG 0.576862 8:+3180852 MsG0880042053.01.T01:CDS
ATCTTCATGTCATCTATGCT+AGG 0.577473 8:+3178394 MsG0880042053.01.T01:CDS
TACATAGTTGGATACTGAAG+AGG 0.577579 8:-3178458 None:intergenic
TTTGTCGGATTTGCGGAACC+CGG 0.579033 8:-3179493 None:intergenic
TGATGCACTTAATCACGCTC+AGG 0.579821 8:+3176843 MsG0880042053.01.T01:CDS
AAGGCTCAGAATTTCTAGGC+AGG 0.581505 8:+3176642 MsG0880042053.01.T01:CDS
CTTAACAACGATGAGATTCA+GGG 0.582740 8:+3176617 MsG0880042053.01.T01:CDS
AGCAGTTGAGTGTATTCCAA+TGG 0.584863 8:+3181064 MsG0880042053.01.T01:CDS
GTCTCGTCATGCTCATGTGA+AGG 0.586436 8:-3180534 None:intergenic
AACGATGAGATTCAGGGTCA+AGG 0.586447 8:+3176623 MsG0880042053.01.T01:CDS
ACAGCTGTTCTATAAACAAG+TGG 0.587141 8:-3184828 None:intergenic
GACCTATCTTCCTTCCAACA+TGG 0.587812 8:+3180435 MsG0880042053.01.T01:CDS
AATGTGATTTGTCGGATTTG+CGG 0.589636 8:-3179500 None:intergenic
GTTACAATGTAATTTCAGGT+AGG 0.590871 8:-3184923 None:intergenic
AACCCGGACTTTCAACAGCA+TGG 0.591961 8:-3179477 None:intergenic
TCTGTTAAAAGCCCTTCGCG+CGG 0.592133 8:+3176593 MsG0880042053.01.T01:CDS
TTTGAAAATTCTCAATGCCA+GGG 0.594336 8:-3180648 None:intergenic
ACTGCTTCCTCTGTTTCTGA+GGG 0.597603 8:+3180555 MsG0880042053.01.T01:CDS
ATGAGAAATGCAAACTAGAG+AGG 0.598711 8:+3177202 MsG0880042053.01.T01:CDS
TTTGTGTTAACATGCTCGGA+TGG 0.599067 8:+3183592 MsG0880042053.01.T01:CDS
CCGCTAATGATCTTGCTCGA+AGG 0.606083 8:+3177375 MsG0880042053.01.T01:CDS
AACAGCAATCTGTTCACGAA+GGG 0.608091 8:-3177073 None:intergenic
TGGGTTCGGCATCTTCAGGA+TGG 0.610087 8:+3180845 MsG0880042053.01.T01:CDS
GAAAGGGAGAGCATGACCAC+GGG 0.613044 8:+3184686 MsG0880042053.01.T01:exon
TATCAGTTTATCGACATCAT+CGG 0.613449 8:-3181042 None:intergenic
CAACCAATGAGCAATATGAC+AGG 0.619492 8:+3179702 MsG0880042053.01.T01:CDS
GTATTGGATGACAAAAGGAA+AGG 0.619998 8:+3184669 MsG0880042053.01.T01:CDS
ACATACAAAGAGAAGTTCGA+CGG 0.621070 8:-3180723 None:intergenic
GGATTGACCGTGGCAACCCG+TGG 0.623678 8:-3184702 None:intergenic
AGTTTCTGAGAAATTCTCAA+AGG 0.625438 8:+3183293 MsG0880042053.01.T01:CDS
AATTGTGACGAGAGACCACA+TGG 0.632894 8:-3183571 None:intergenic
ATCATTAATCTAGATTGCAG+AGG 0.641867 8:+3178360 MsG0880042053.01.T01:intron
GATAAGTGGTACTGAAGCTG+CGG 0.645103 8:+3183269 MsG0880042053.01.T01:CDS
GGAAAGGGAGAGCATGACCA+CGG 0.645364 8:+3184685 MsG0880042053.01.T01:exon
CTTACTCTGGAAGAGTCGCA+TGG 0.652953 8:-3184170 None:intergenic
TAAATTACCCTCAGAAACAG+AGG 0.657268 8:-3180562 None:intergenic
TTACATCACCACTAACACCT+GGG 0.665988 8:-3179734 None:intergenic
GAAGAGGCATTCATAACGCG+AGG 0.670089 8:-3178442 None:intergenic
ATGACAGGATATATGAACCC+AGG 0.675735 8:+3179717 MsG0880042053.01.T01:CDS
AAACAGCAATCTGTTCACGA+AGG 0.678830 8:-3177074 None:intergenic
TGTAAACGGAGCATTCAGAA+GGG 0.697256 8:+3179752 MsG0880042053.01.T01:CDS
CTGCAGATTAAAGTTCCATG+TGG 0.704102 8:+3183556 MsG0880042053.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAGAATTTC+TGG + Chr8:3179237-3179256 MsG0880042053.01.T01:intron 10.0%
!! AAATAAATTTATAATCTGAA+TGG - Chr8:3177006-3177025 None:intergenic 10.0%
!! ATTAAATAAATAACCAATTT+GGG + Chr8:3183836-3183855 MsG0880042053.01.T01:intron 10.0%
!!! AAAATATAATAGTGTTTTTT+AGG + Chr8:3176885-3176904 MsG0880042053.01.T01:intron 10.0%
!!! ATAATTATTTTTTTAACACT+CGG + Chr8:3183024-3183043 MsG0880042053.01.T01:intron 10.0%
!!! CTTTTTTTTTTTTTTTTTGA+CGG - Chr8:3179231-3179250 None:intergenic 10.0%
!!! TATTATCATGTTTAAATTTT+AGG + Chr8:3178649-3178668 MsG0880042053.01.T01:intron 10.0%
!!! TGAAATATTTTTAAATGAAA+TGG - Chr8:3184342-3184361 None:intergenic 10.0%
!!! TTTTTTCATATAAAAAATTC+AGG - Chr8:3184726-3184745 None:intergenic 10.0%
!! AACATTGTATTAAGTAAATT+AGG + Chr8:3184943-3184962 MsG0880042053.01.T01:three_prime_UTR 15.0%
!! AAGTCAATTATATAGAAAAA+AGG + Chr8:3177950-3177969 MsG0880042053.01.T01:intron 15.0%
!! AAGTCTATATTAGTATAATT+AGG - Chr8:3178776-3178795 None:intergenic 15.0%
!! AATATCCAAAAATTATTTAG+AGG - Chr8:3178961-3178980 None:intergenic 15.0%
!! ACAAAAAAACTTAAAATCTA+TGG - Chr8:3183395-3183414 None:intergenic 15.0%
!! ACATTGTATTAAGTAAATTA+GGG + Chr8:3184944-3184963 MsG0880042053.01.T01:three_prime_UTR 15.0%
!! AGTCTATATTAGTATAATTA+GGG - Chr8:3178775-3178794 None:intergenic 15.0%
!! ATTCAAACTTACATTTAAAA+TGG - Chr8:3184073-3184092 None:intergenic 15.0%
!! CATTAAATAAATAACCAATT+TGG + Chr8:3183835-3183854 MsG0880042053.01.T01:intron 15.0%
!! GAGTGTTAAAAAAATAATTA+TGG - Chr8:3183025-3183044 None:intergenic 15.0%
!! TAAATTAGTTATACATATCA+TGG + Chr8:3181113-3181132 MsG0880042053.01.T01:intron 15.0%
!! TAAGTACATATATTACAAAA+TGG - Chr8:3180393-3180412 None:intergenic 15.0%
!! TGTATACATTATATGAATTA+TGG + Chr8:3181150-3181169 MsG0880042053.01.T01:intron 15.0%
!! TTAGTTTATGAATATTGTTA+AGG + Chr8:3180331-3180350 MsG0880042053.01.T01:intron 15.0%
!!! AACATTGTATTTTTATTTTG+AGG + Chr8:3185071-3185090 MsG0880042053.01.T01:three_prime_UTR 15.0%
!!! ACATTGTATTTTTATTTTGA+GGG + Chr8:3185072-3185091 MsG0880042053.01.T01:three_prime_UTR 15.0%
!!! ATTATGTTAAATTGATGTTT+TGG + Chr8:3178716-3178735 MsG0880042053.01.T01:intron 15.0%
!!! GTTTTTGTTAGTTTTTTTAT+CGG + Chr8:3182616-3182635 MsG0880042053.01.T01:intron 15.0%
!!! GTTTTTTCTATTTTTACAAT+AGG + Chr8:3178078-3178097 MsG0880042053.01.T01:intron 15.0%
!!! TAAAAATTGTTATTCATAGT+TGG + Chr8:3182778-3182797 MsG0880042053.01.T01:intron 15.0%
!!! TTTATCAACAAACATTTTTT+TGG - Chr8:3181914-3181933 None:intergenic 15.0%
!!! TTTTAATCCTAACTAAATAA+GGG + Chr8:3178794-3178813 MsG0880042053.01.T01:intron 15.0%
!! AACTAATTTGAAGAAATTTC+TGG - Chr8:3182041-3182060 None:intergenic 20.0%
!! AATGCAAATTAAGATGAATA+AGG - Chr8:3183156-3183175 None:intergenic 20.0%
!! AGAATCATGTATTATAGATT+AGG - Chr8:3178935-3178954 None:intergenic 20.0%
!! AGGTAATCAACTTAATTTAA+CGG + Chr8:3177157-3177176 MsG0880042053.01.T01:intron 20.0%
!! ATTATCTCAAAAAAATTCAG+GGG - Chr8:3176924-3176943 None:intergenic 20.0%
!! ATTGTAGTTATTAGTTGTTA+GGG - Chr8:3180002-3180021 None:intergenic 20.0%
!! ATTTAAACATGATAATAGAG+TGG - Chr8:3178646-3178665 None:intergenic 20.0%
!! ATTTACATGATCAAATACAA+TGG + Chr8:3179009-3179028 MsG0880042053.01.T01:intron 20.0%
!! ATTTCTGTTGTAAAAGTTAT+AGG + Chr8:3183337-3183356 MsG0880042053.01.T01:intron 20.0%
!! CAATTATATAGAAAAAAGGT+AGG + Chr8:3177954-3177973 MsG0880042053.01.T01:intron 20.0%
!! CAGATTATAAATTTATTTCC+AGG + Chr8:3177008-3177027 MsG0880042053.01.T01:intron 20.0%
!! CATTATCTCAAAAAAATTCA+GGG - Chr8:3176925-3176944 None:intergenic 20.0%
!! GTGTATTGAAAAATAAGTTA+TGG - Chr8:3177549-3177568 None:intergenic 20.0%
!! TAAAAGTTCGAAATTTATCA+CGG - Chr8:3184380-3184399 None:intergenic 20.0%
!! TAACTATCATCTACAATATT+AGG - Chr8:3184258-3184277 None:intergenic 20.0%
!! TATAAAAGAATGAAACTACT+AGG - Chr8:3177648-3177667 None:intergenic 20.0%
!! TCAATTGCCTAATAAAAATA+TGG - Chr8:3177326-3177345 None:intergenic 20.0%
!! TGATAAACACAAATAATATG+AGG - Chr8:3179580-3179599 None:intergenic 20.0%
!! TGTTAGTCATGTATTTAAAA+TGG - Chr8:3184102-3184121 None:intergenic 20.0%
!! TTACAGTATCATTTGATTAT+TGG + Chr8:3184772-3184791 MsG0880042053.01.T01:three_prime_UTR 20.0%
!! TTTACCAAATACATTGAAAA+AGG + Chr8:3182476-3182495 MsG0880042053.01.T01:intron 20.0%
!!! AAAAATGTTTGTTGATAAAC+TGG + Chr8:3181915-3181934 MsG0880042053.01.T01:intron 20.0%
!!! AAATATTTCACACACAATTT+TGG + Chr8:3184352-3184371 MsG0880042053.01.T01:intron 20.0%
!!! AATAACTGCAATTCATTTTA+GGG - Chr8:3184304-3184323 None:intergenic 20.0%
!!! AATTCCTTTTTCAATGTATT+TGG - Chr8:3182483-3182502 None:intergenic 20.0%
!!! AGAGATTTTATCTTACTTTT+AGG - Chr8:3178832-3178851 None:intergenic 20.0%
!!! ATATCATTTCTAAAAGATAC+AGG + Chr8:3183118-3183137 MsG0880042053.01.T01:intron 20.0%
!!! ATTCTTTTTTTTTAATGGAG+TGG + Chr8:3180939-3180958 MsG0880042053.01.T01:intron 20.0%
!!! CAGAAAAAAATGAAAGTTTT+AGG - Chr8:3178154-3178173 None:intergenic 20.0%
!!! CATGTTTAAATTTTAGGTTT+AGG + Chr8:3178655-3178674 MsG0880042053.01.T01:intron 20.0%
!!! CATTGTATTAATTACAGTTT+TGG + Chr8:3185033-3185052 MsG0880042053.01.T01:three_prime_UTR 20.0%
!!! CTATTTTCTATTTTACATAG+CGG - Chr8:3177883-3177902 None:intergenic 20.0%
!!! CTTTTAATCCTAACTAAATA+AGG + Chr8:3178793-3178812 MsG0880042053.01.T01:intron 20.0%
!!! CTTTTAGAAATGATATTGAA+CGG - Chr8:3183114-3183133 None:intergenic 20.0%
!!! TAATTTATTTTCAAACCTGA+CGG - Chr8:3181100-3181119 None:intergenic 20.0%
!!! TAATTTTACCACTTGTATAA+TGG + Chr8:3181273-3181292 MsG0880042053.01.T01:intron 20.0%
!!! TATCACTCAGATTTTTTTTT+TGG + Chr8:3181787-3181806 MsG0880042053.01.T01:intron 20.0%
!!! TTAACAAAACATTCCTTTTT+TGG + Chr8:3184624-3184643 MsG0880042053.01.T01:intron 20.0%
!!! TTACATGCCATATTTTTATT+AGG + Chr8:3177316-3177335 MsG0880042053.01.T01:intron 20.0%
!!! TTGATTATTGGTTTTTTTGT+TGG + Chr8:3184784-3184803 MsG0880042053.01.T01:three_prime_UTR 20.0%
!!! TTTTTTAAGTACGTTTTTCT+TGG + Chr8:3180984-3181003 MsG0880042053.01.T01:intron 20.0%
! AACACAGTAAATGTAATTAC+CGG - Chr8:3183648-3183667 None:intergenic 25.0%
! AAGTGAAACATATAATGCAT+TGG + Chr8:3182444-3182463 MsG0880042053.01.T01:intron 25.0%
! ACTGATATACAAGTAATTGT+TGG - Chr8:3184212-3184231 None:intergenic 25.0%
! ACTGATATCATTATAATTCC+TGG + Chr8:3180811-3180830 MsG0880042053.01.T01:intron 25.0%
! AGAAGAGAAGGAAATTAATA+TGG - Chr8:3180788-3180807 None:intergenic 25.0%
! AGGCTGCATATAAATAAAAA+AGG + Chr8:3177974-3177993 MsG0880042053.01.T01:intron 25.0%
! ATAGAAGCTAAGAAAATGTA+AGG + Chr8:3184867-3184886 MsG0880042053.01.T01:three_prime_UTR 25.0%
! ATAGAATGACACAAATTATG+CGG - Chr8:3179079-3179098 None:intergenic 25.0%
! ATGTTAGGATTACAGAATAA+AGG - Chr8:3180081-3180100 None:intergenic 25.0%
! ATTGACACATATTTGTCTAA+AGG + Chr8:3182282-3182301 MsG0880042053.01.T01:intron 25.0%
! CAATGTTACAATGTAATTTC+AGG - Chr8:3184930-3184949 None:intergenic 25.0%
! CATGGTTTAATTGATCAAAT+TGG + Chr8:3180453-3180472 MsG0880042053.01.T01:CDS 25.0%
! CTCAGATCATGTTTAATATA+TGG + Chr8:3182368-3182387 MsG0880042053.01.T01:intron 25.0%
! CTGATATCATTATAATTCCT+GGG + Chr8:3180812-3180831 MsG0880042053.01.T01:intron 25.0%
! GATGAAAAGTTAAATACCAA+TGG - Chr8:3180766-3180785 None:intergenic 25.0%
! GATTGTAGTTATTAGTTGTT+AGG - Chr8:3180003-3180022 None:intergenic 25.0%
! GCATTATCTCAAAAAAATTC+AGG - Chr8:3176926-3176945 None:intergenic 25.0%
! GGCTGCATATAAATAAAAAA+GGG + Chr8:3177975-3177994 MsG0880042053.01.T01:intron 25.0%
! GTAATATATGTACTTATCCA+CGG + Chr8:3180397-3180416 MsG0880042053.01.T01:intron 25.0%
! GTACTATTAAACACATGAAA+TGG + Chr8:3182974-3182993 MsG0880042053.01.T01:intron 25.0%
! TAAGTCATTCTTGAAGTTAA+TGG + Chr8:3179357-3179376 MsG0880042053.01.T01:intron 25.0%
! TATATCATCTAGTAGAAACT+GGG + Chr8:3178184-3178203 MsG0880042053.01.T01:intron 25.0%
! TCACATTCATAATGAATTCA+TGG + Chr8:3179516-3179535 MsG0880042053.01.T01:CDS 25.0%
! TCTAATGCACCATAAAATTT+GGG - Chr8:3183926-3183945 None:intergenic 25.0%
! TGCTTGATAAATGATAAACA+GGG + Chr8:3178498-3178517 MsG0880042053.01.T01:intron 25.0%
! TGTTAGGATTACAGAATAAA+GGG - Chr8:3180080-3180099 None:intergenic 25.0%
! TTCATAATGAATTCATGGTA+TGG + Chr8:3179521-3179540 MsG0880042053.01.T01:intron 25.0%
! TTCTAATGCACCATAAAATT+TGG - Chr8:3183927-3183946 None:intergenic 25.0%
! TTTCCACAATTTCTGTTATT+AGG + Chr8:3182649-3182668 MsG0880042053.01.T01:intron 25.0%
! TTTGATCAATTAAACCATGT+TGG - Chr8:3180452-3180471 None:intergenic 25.0%
!! AACCATGTGAATTTTTCTAA+AGG + Chr8:3182100-3182119 MsG0880042053.01.T01:intron 25.0%
!! ATCTACTTCAATGACATTTT+AGG + Chr8:3177137-3177156 MsG0880042053.01.T01:intron 25.0%
!! ATCTCTCTGATTGAAATTTT+TGG + Chr8:3179106-3179125 MsG0880042053.01.T01:intron 25.0%
!! ATTGAGAATTTTCAAATCTG+CGG + Chr8:3180655-3180674 MsG0880042053.01.T01:CDS 25.0%
!! ATTTTATTACCATAGTGTCT+AGG - Chr8:3176870-3176889 None:intergenic 25.0%
!! CAATAACTGCAATTCATTTT+AGG - Chr8:3184305-3184324 None:intergenic 25.0%
!! CTCTTCCTCTAAATAATTTT+TGG + Chr8:3178953-3178972 MsG0880042053.01.T01:intron 25.0%
!! GGATATTCTAACATTTTGTA+TGG + Chr8:3178974-3178993 MsG0880042053.01.T01:intron 25.0%
!! GGTGAAAGACAATTTTTAAA+TGG + Chr8:3180492-3180511 MsG0880042053.01.T01:CDS 25.0%
!! TAGAGAGTATGTGTATAAAT+AGG - Chr8:3179954-3179973 None:intergenic 25.0%
!! TCATTATGAATGTGATTTGT+CGG - Chr8:3179511-3179530 None:intergenic 25.0%
!! TGTATTTTGTTCACTATTCT+GGG - Chr8:3182928-3182947 None:intergenic 25.0%
!! TTTTATCTTAAAAGTAGCAC+CGG + Chr8:3183788-3183807 MsG0880042053.01.T01:intron 25.0%
!! TTTTCATACCTTTACATAGT+TGG - Chr8:3178473-3178492 None:intergenic 25.0%
!! TTTTTACAATAGGTCATGTT+TGG + Chr8:3178088-3178107 MsG0880042053.01.T01:intron 25.0%
!!! AAGATCAGTGATTACTTTTT+TGG + Chr8:3179397-3179416 MsG0880042053.01.T01:intron 25.0%
!!! AGGGAAGTTAGTTTTTTATT+TGG - Chr8:3179983-3180002 None:intergenic 25.0%
!!! TCAGCATTTTATTTCTACTA+CGG + Chr8:3177466-3177485 MsG0880042053.01.T01:intron 25.0%
AAAAAGGGAATGATCGAAAA+TGG + Chr8:3177990-3178009 MsG0880042053.01.T01:intron 30.0%
AAAAGTGAATAGAACAAACG+AGG - Chr8:3183080-3183099 None:intergenic 30.0%
AAAAGTTATAGGCAATACCT+TGG + Chr8:3183348-3183367 MsG0880042053.01.T01:intron 30.0%
AAAGTTATAGGCAATACCTT+GGG + Chr8:3183349-3183368 MsG0880042053.01.T01:intron 30.0%
AAATCTCTTAGAATGAGACT+TGG + Chr8:3178844-3178863 MsG0880042053.01.T01:intron 30.0%
AACAGAAATTTGGTTATCGA+AGG - Chr8:3184475-3184494 None:intergenic 30.0%
AACATGATCTGAGAACTAAA+AGG - Chr8:3182361-3182380 None:intergenic 30.0%
AACCAATAGTTGTAACAGTA+TGG + Chr8:3181467-3181486 MsG0880042053.01.T01:intron 30.0%
AACTTCTCTTTGTATGTTTC+AGG + Chr8:3180729-3180748 MsG0880042053.01.T01:CDS 30.0%
AAGAAGAGGTAACAGAAATT+TGG - Chr8:3184485-3184504 None:intergenic 30.0%
AAGATAGAATTACCTTACTC+TGG - Chr8:3184186-3184205 None:intergenic 30.0%
AATATGTTCCATCTCCTTTA+TGG + Chr8:3183528-3183547 MsG0880042053.01.T01:intron 30.0%
AATCTGCAGATAATCCATAA+AGG - Chr8:3183545-3183564 None:intergenic 30.0%
ACAAGTCAAATCTTTCTAGA+TGG + Chr8:3180625-3180644 MsG0880042053.01.T01:intron 30.0%
ACAATTTCTGTTATTAGGAC+AGG + Chr8:3182654-3182673 MsG0880042053.01.T01:intron 30.0%
ACAATTTGTGTTAACATGCT+CGG + Chr8:3183588-3183607 MsG0880042053.01.T01:CDS 30.0%
ACACAGTAAATGTAATTACC+GGG - Chr8:3183647-3183666 None:intergenic 30.0%
ACTCGCTCAAATTGTATAAA+CGG + Chr8:3181520-3181539 MsG0880042053.01.T01:intron 30.0%
AGAAAGTGAAGTTAAAAGTG+AGG + Chr8:3181355-3181374 MsG0880042053.01.T01:intron 30.0%
AGGGCTGCAAAATTTAAATA+TGG + Chr8:3181593-3181612 MsG0880042053.01.T01:intron 30.0%
AGTTCAGAAGCTAGTTAATT+AGG - Chr8:3181447-3181466 None:intergenic 30.0%
ATAAATGAGAAGGCAATATG+AGG - Chr8:3181730-3181749 None:intergenic 30.0%
ATCAATTAAACCATGTTGGA+AGG - Chr8:3180448-3180467 None:intergenic 30.0%
ATCATTAATCTAGATTGCAG+AGG + Chr8:3178360-3178379 MsG0880042053.01.T01:intron 30.0%
ATGAATTATGGCTCAATCTA+TGG + Chr8:3181162-3181181 MsG0880042053.01.T01:intron 30.0%
ATGGTAACTTCCATATTGAA+AGG + Chr8:3178009-3178028 MsG0880042053.01.T01:intron 30.0%
ATGTATACTTTGATGCATGA+AGG + Chr8:3182750-3182769 MsG0880042053.01.T01:intron 30.0%
ATGTCTCGACAAAAGTTAAA+TGG + Chr8:3179831-3179850 MsG0880042053.01.T01:intron 30.0%
ATTGAAAGGTTTACGTATCA+CGG + Chr8:3178023-3178042 MsG0880042053.01.T01:intron 30.0%
ATTTGAAAATTCTCAATGCC+AGG - Chr8:3180652-3180671 None:intergenic 30.0%
CAAGAAATTCATGCAGATAA+TGG + Chr8:3179451-3179470 MsG0880042053.01.T01:CDS 30.0%
CAGTACCACTTATCTTAATT+TGG - Chr8:3183263-3183282 None:intergenic 30.0%
CATATTTGCTTGAACAACTT+AGG + Chr8:3182123-3182142 MsG0880042053.01.T01:intron 30.0%
CTAATGCACCATAAAATTTG+GGG - Chr8:3183925-3183944 None:intergenic 30.0%
CTATATCATCTAGTAGAAAC+TGG + Chr8:3178183-3178202 MsG0880042053.01.T01:intron 30.0%
GAAACTTTGTGTAAGAAGAT+TGG - Chr8:3182857-3182876 None:intergenic 30.0%
GAAATTCTCAAAGGACTTAT+CGG + Chr8:3183302-3183321 MsG0880042053.01.T01:CDS 30.0%
GATACGTAAACCTTTCAATA+TGG - Chr8:3178022-3178041 None:intergenic 30.0%
GATATCAGTAATAGAAGAGA+AGG - Chr8:3180800-3180819 None:intergenic 30.0%
GCATATAACGATAAATGAGA+AGG - Chr8:3181740-3181759 None:intergenic 30.0%
GGATACCAAATTAAGATAAG+TGG + Chr8:3183255-3183274 MsG0880042053.01.T01:CDS 30.0%
GTATACATATCTACATTGCA+TGG - Chr8:3182738-3182757 None:intergenic 30.0%
GTATTTGATCATGTAAATGC+TGG - Chr8:3179007-3179026 None:intergenic 30.0%
GTGATATTCTTATGATGTCT+AGG - Chr8:3181773-3181792 None:intergenic 30.0%
GTGCTTGATAAATGATAAAC+AGG + Chr8:3178497-3178516 MsG0880042053.01.T01:intron 30.0%
GTTAGGAGTTTATCTTTAAG+AGG + Chr8:3180150-3180169 MsG0880042053.01.T01:intron 30.0%
GTTTCTACTAGATGATATAG+CGG - Chr8:3178183-3178202 None:intergenic 30.0%
TAAAATAGAAAATAGAGCCG+CGG + Chr8:3177888-3177907 MsG0880042053.01.T01:intron 30.0%
TAAACTGATCTATTTCGACA+AGG + Chr8:3177670-3177689 MsG0880042053.01.T01:intron 30.0%
TAATGCACCATAAAATTTGG+GGG - Chr8:3183924-3183943 None:intergenic 30.0%
TACATGATCAAATACAATGG+AGG + Chr8:3179012-3179031 MsG0880042053.01.T01:intron 30.0%
TACTTGTATATCAGTGACAA+TGG + Chr8:3184217-3184236 MsG0880042053.01.T01:intron 30.0%
TAGACTCACTTTCAAATCAT+GGG - Chr8:3177432-3177451 None:intergenic 30.0%
TATCAGTTTATCGACATCAT+CGG - Chr8:3181045-3181064 None:intergenic 30.0%
TATGTAATATCCTAGCTAGT+GGG + Chr8:3181554-3181573 MsG0880042053.01.T01:intron 30.0%
TATTGGATGACAAAAGGAAA+GGG + Chr8:3184670-3184689 MsG0880042053.01.T01:CDS 30.0%
TCAGGTAAAATTCTTTCCAT+TGG + Chr8:3180747-3180766 MsG0880042053.01.T01:intron 30.0%
TCTGACAACATAATAGAACT+CGG + Chr8:3181305-3181324 MsG0880042053.01.T01:intron 30.0%
TGACGAGTAACTAAAGAAAT+TGG - Chr8:3177508-3177527 None:intergenic 30.0%
TGTCCTAATAACAGAAATTG+TGG - Chr8:3182655-3182674 None:intergenic 30.0%
TTATGTAATATCCTAGCTAG+TGG + Chr8:3181553-3181572 MsG0880042053.01.T01:intron 30.0%
TTCAGTATCCAACTATGTAA+AGG + Chr8:3178462-3178481 MsG0880042053.01.T01:CDS 30.0%
TTTGAAAATTCTCAATGCCA+GGG - Chr8:3180651-3180670 None:intergenic 30.0%
! AGAGTATTCTCTATTGTGAA+GGG - Chr8:3179884-3179903 None:intergenic 30.0%
! AGATGGATTCTTCTGAAAAT+TGG + Chr8:3183202-3183221 MsG0880042053.01.T01:intron 30.0%
! AGTTTCTGAGAAATTCTCAA+AGG + Chr8:3183293-3183312 MsG0880042053.01.T01:CDS 30.0%
! ATTGCCAATAAGATTTTGCT+GGG - Chr8:3179670-3179689 None:intergenic 30.0%
! ATTTGCACCCTTATTTAGTT+AGG - Chr8:3178804-3178823 None:intergenic 30.0%
! CTGTATTTTGTTCACTATTC+TGG - Chr8:3182929-3182948 None:intergenic 30.0%
! CTGTGCTAAAGTATTAATGA+AGG + Chr8:3181642-3181661 MsG0880042053.01.T01:intron 30.0%
! GATGGATTCTTCTGAAAATT+GGG + Chr8:3183203-3183222 MsG0880042053.01.T01:intron 30.0%
! GGAATTTTCGGAATTAAGAA+TGG + Chr8:3177224-3177243 MsG0880042053.01.T01:CDS 30.0%
! GGCTTTTATTGAGATTTTGA+TGG + Chr8:3178519-3178538 MsG0880042053.01.T01:intron 30.0%
! GTATTTTGTTCACTATTCTG+GGG - Chr8:3182927-3182946 None:intergenic 30.0%
! GTTACAATGTAATTTCAGGT+AGG - Chr8:3184926-3184945 None:intergenic 30.0%
! TAACTTTTGTCGAGACATTA+TGG - Chr8:3179829-3179848 None:intergenic 30.0%
! TAGAGTATTCTCTATTGTGA+AGG - Chr8:3179885-3179904 None:intergenic 30.0%
! TGCCTTTAGAAAAATTCACA+TGG - Chr8:3182105-3182124 None:intergenic 30.0%
! TTCAATTTTCAACCACTATG+CGG - Chr8:3177928-3177947 None:intergenic 30.0%
!! ATTAGCCTTATGATTGTCAA+GGG + Chr8:3179854-3179873 MsG0880042053.01.T01:intron 30.0%
!!! ATTTTAGGTTTAGGCAAAGA+AGG + Chr8:3178664-3178683 MsG0880042053.01.T01:intron 30.0%
!!! CAGCATTTTATTTCTACTAC+GGG + Chr8:3177467-3177486 MsG0880042053.01.T01:intron 30.0%
!!! CCTTTTTTGGACCTTATTTT+GGG + Chr8:3184637-3184656 MsG0880042053.01.T01:intron 30.0%
!!! CTTGTGTTACCTTATTTTCT+CGG - Chr8:3178888-3178907 None:intergenic 30.0%
!!! CTTTTTTGGACCTTATTTTG+GGG + Chr8:3184638-3184657 MsG0880042053.01.T01:intron 30.0%
!!! GATGTTTTTTGCATCTTCTA+AGG - Chr8:3176976-3176995 None:intergenic 30.0%
!!! TACCACATTTTATTTTGTGC+TGG - Chr8:3181864-3181883 None:intergenic 30.0%
!!! TCCTTTTTTGGACCTTATTT+TGG + Chr8:3184636-3184655 MsG0880042053.01.T01:intron 30.0%
!!! TGTTTTAATCCACATACCAT+TGG + Chr8:3183743-3183762 MsG0880042053.01.T01:intron 30.0%
!!! TTTTTTGGACAGGATAGAAT+TGG + Chr8:3179412-3179431 MsG0880042053.01.T01:intron 30.0%
AAAAAATTCAGGATTGACCG+TGG - Chr8:3184715-3184734 None:intergenic 35.0%
AAAATAGAAAATAGAGCCGC+GGG + Chr8:3177889-3177908 MsG0880042053.01.T01:intron 35.0%
AAATCCTAACCATTGGATCA+GGG + Chr8:3180232-3180251 MsG0880042053.01.T01:intron 35.0%
AATCTTCAGTGTTCAACTTC+TGG + Chr8:3182311-3182330 MsG0880042053.01.T01:intron 35.0%
AATGCACCATAAAATTTGGG+GGG - Chr8:3183923-3183942 None:intergenic 35.0%
AATGTGCAGTAACAGAAAAC+AGG - Chr8:3184527-3184546 None:intergenic 35.0%
AATTCATGGTATGGTACTGT+TGG + Chr8:3179530-3179549 MsG0880042053.01.T01:intron 35.0%
ACAGCTGTTCTATAAACAAG+TGG - Chr8:3184831-3184850 None:intergenic 35.0%
ACATACAAAGAGAAGTTCGA+CGG - Chr8:3180726-3180745 None:intergenic 35.0%
ACTCTATTCTTAAGACGATC+AGG + Chr8:3183234-3183253 MsG0880042053.01.T01:CDS 35.0%
ACTTGGTTACTAACAAGACA+GGG + Chr8:3178861-3178880 MsG0880042053.01.T01:intron 35.0%
AGAATTGGAGAGTTAACTTC+TGG + Chr8:3179427-3179446 MsG0880042053.01.T01:CDS 35.0%
AGACTAATTCCAATGGTATG+TGG - Chr8:3183755-3183774 None:intergenic 35.0%
AGATTTCTAATGCTGCTGAT+AGG + Chr8:3179787-3179806 MsG0880042053.01.T01:CDS 35.0%
AGCACAACTTACAAAAGACA+TGG - Chr8:3177255-3177274 None:intergenic 35.0%
AGCCATACTGTTACAACTAT+TGG - Chr8:3181472-3181491 None:intergenic 35.0%
ATCTTCATGTCATCTATGCT+AGG + Chr8:3178394-3178413 MsG0880042053.01.T01:CDS 35.0%
ATGACATGTTAGACTTACAC+GGG + Chr8:3182071-3182090 MsG0880042053.01.T01:intron 35.0%
ATGAGAAATGCAAACTAGAG+AGG + Chr8:3177202-3177221 MsG0880042053.01.T01:CDS 35.0%
ATTCCCCAGCAAAATCTTAT+TGG + Chr8:3179663-3179682 MsG0880042053.01.T01:CDS 35.0%
ATTCCTGGAGAAAAACTTCT+TGG + Chr8:3180685-3180704 MsG0880042053.01.T01:CDS 35.0%
ATTCTGTTATCTTTGTCAGG+GGG + Chr8:3181813-3181832 MsG0880042053.01.T01:intron 35.0%
ATTTCCCTAAGAGTGAAACT+AGG + Chr8:3178224-3178243 MsG0880042053.01.T01:intron 35.0%
CAACTTAATTTAACGGTTGC+AGG + Chr8:3177164-3177183 MsG0880042053.01.T01:intron 35.0%
CAATACGCTAATGATAACAC+TGG - Chr8:3177835-3177854 None:intergenic 35.0%
CACACAACATATACAGATAG+TGG - Chr8:3178286-3178305 None:intergenic 35.0%
CACTATCTGTATATGTTGTG+TGG + Chr8:3178284-3178303 MsG0880042053.01.T01:intron 35.0%
CAGATAATCCATAAAGGAGA+TGG - Chr8:3183539-3183558 None:intergenic 35.0%
CATGACATGTTAGACTTACA+CGG + Chr8:3182070-3182089 MsG0880042053.01.T01:intron 35.0%
CATTAGAAACTCAGCTTTCT+AGG + Chr8:3183939-3183958 MsG0880042053.01.T01:intron 35.0%
CATTCCAATCCATAAAACCA+AGG - Chr8:3176715-3176734 None:intergenic 35.0%
CCCAAAATAAGGTCCAAAAA+AGG - Chr8:3184640-3184659 None:intergenic 35.0%
CGACTCACAGTTATTATGTT+AGG - Chr8:3180096-3180115 None:intergenic 35.0%
CGATTCTGTTATCTTTGTCA+GGG + Chr8:3181811-3181830 MsG0880042053.01.T01:intron 35.0%
CTACGACAACAAAAAAGAAG+AGG - Chr8:3184499-3184518 None:intergenic 35.0%
CTAGACTCACTTTCAAATCA+TGG - Chr8:3177433-3177452 None:intergenic 35.0%
CTATCCTAGTTTCACTCTTA+GGG - Chr8:3178231-3178250 None:intergenic 35.0%
CTGAGTAACCATTATACAAG+TGG - Chr8:3181284-3181303 None:intergenic 35.0%
CTTAACAACGATGAGATTCA+GGG + Chr8:3176617-3176636 MsG0880042053.01.T01:CDS 35.0%
GAAGAACAAATCCTAACCAT+TGG + Chr8:3180225-3180244 MsG0880042053.01.T01:intron 35.0%
GAATTGGAGAGTTAACTTCT+GGG + Chr8:3179428-3179447 MsG0880042053.01.T01:CDS 35.0%
GACCAGCACAAAATAAAATG+TGG + Chr8:3181859-3181878 MsG0880042053.01.T01:intron 35.0%
GAGAGAGTTGTGTAAAAGTT+AGG + Chr8:3180133-3180152 MsG0880042053.01.T01:intron 35.0%
GAGTATTCTCTATTGTGAAG+GGG - Chr8:3179883-3179902 None:intergenic 35.0%
GATTCTGTTATCTTTGTCAG+GGG + Chr8:3181812-3181831 MsG0880042053.01.T01:intron 35.0%
GCACAATCTTGAAAAACAAC+TGG + Chr8:3176798-3176817 MsG0880042053.01.T01:CDS 35.0%
GGTAAAAGTTCCGTATTTGA+CGG + Chr8:3178575-3178594 MsG0880042053.01.T01:intron 35.0%
GTATTGGATGACAAAAGGAA+AGG + Chr8:3184669-3184688 MsG0880042053.01.T01:CDS 35.0%
GTGTTATCATTAGCGTATTG+TGG + Chr8:3177835-3177854 MsG0880042053.01.T01:intron 35.0%
TAAATTACCCTCAGAAACAG+AGG - Chr8:3180565-3180584 None:intergenic 35.0%
TACATAGTTGGATACTGAAG+AGG - Chr8:3178461-3178480 None:intergenic 35.0%
TATCCTGTCATATTGCTCAT+TGG - Chr8:3179708-3179727 None:intergenic 35.0%
TATTGTTCCCTACACATCTT+AGG + Chr8:3182681-3182700 MsG0880042053.01.T01:intron 35.0%
TCCTTAACCAGTACACTAAA+AGG - Chr8:3182396-3182415 None:intergenic 35.0%
TCGATTCTGTTATCTTTGTC+AGG + Chr8:3181810-3181829 MsG0880042053.01.T01:intron 35.0%
TCGTCATTCATGATGATATG+AGG + Chr8:3177522-3177541 MsG0880042053.01.T01:intron 35.0%
TGAGAAATGCAAACTAGAGA+GGG + Chr8:3177203-3177222 MsG0880042053.01.T01:CDS 35.0%
TGTAAGTCTAACATGTCATG+TGG - Chr8:3182070-3182089 None:intergenic 35.0%
TGTATTCCAATGGACGATAA+AGG + Chr8:3181074-3181093 MsG0880042053.01.T01:CDS 35.0%
TGTGATACAACGTACTAACT+CGG + Chr8:3178746-3178765 MsG0880042053.01.T01:intron 35.0%
TTACGTATCACGGTGAATAT+AGG + Chr8:3178033-3178052 MsG0880042053.01.T01:intron 35.0%
TTTAGGCAAAGAAGGAGAAA+AGG + Chr8:3178672-3178691 MsG0880042053.01.T01:intron 35.0%
TTTCTGTTATTAGGACAGGT+AGG + Chr8:3182658-3182677 MsG0880042053.01.T01:intron 35.0%
! AAGTACGTTTTTCTTGGATC+AGG + Chr8:3180990-3181009 MsG0880042053.01.T01:intron 35.0%
! AATGTGATTTGTCGGATTTG+CGG - Chr8:3179503-3179522 None:intergenic 35.0%
! AGGAATGCTTGGATTTTACA+AGG - Chr8:3182893-3182912 None:intergenic 35.0%
! ATGATCCACATATTGGTAAC+CGG - Chr8:3181499-3181518 None:intergenic 35.0%
! ATGATGTCTAGGACAGAAAT+TGG - Chr8:3181762-3181781 None:intergenic 35.0%
! CAAACTAGAGAGGGAATTTT+CGG + Chr8:3177212-3177231 MsG0880042053.01.T01:CDS 35.0%
! CATTGCCAATAAGATTTTGC+TGG - Chr8:3179671-3179690 None:intergenic 35.0%
! CATTTCTGGGTCTATAAAGT+TGG - Chr8:3182253-3182272 None:intergenic 35.0%
! CTGGTAGGTTTTCTTTTTGT+TGG + Chr8:3182330-3182349 MsG0880042053.01.T01:intron 35.0%
! GAATGCTTGGATTTTACAAG+GGG - Chr8:3182891-3182910 None:intergenic 35.0%
! GGAATGCTTGGATTTTACAA+GGG - Chr8:3182892-3182911 None:intergenic 35.0%
! TATGGTTCCTTTTAGTGTAC+TGG + Chr8:3182386-3182405 MsG0880042053.01.T01:intron 35.0%
! TTGCCAATAAGATTTTGCTG+GGG - Chr8:3179669-3179688 None:intergenic 35.0%
! TTTACTGTGTTTCAAGTCCA+TGG + Chr8:3183657-3183676 MsG0880042053.01.T01:intron 35.0%
! TTTCAAGAGTTTTACACCCA+AGG - Chr8:3183368-3183387 None:intergenic 35.0%
! TTTGCATTCGTCACATTTTG+CGG + Chr8:3183168-3183187 MsG0880042053.01.T01:intron 35.0%
!! ACTGCAATTCATTTTAGGGA+TGG - Chr8:3184300-3184319 None:intergenic 35.0%
!! CACACACTCTAAAATTCACA+TGG - Chr8:3181969-3181988 None:intergenic 35.0%
!! GATTAGCCTTATGATTGTCA+AGG + Chr8:3179853-3179872 MsG0880042053.01.T01:intron 35.0%
!! GATTGCTGTTTCTTGTATGA+AGG + Chr8:3177086-3177105 MsG0880042053.01.T01:CDS 35.0%
!! TGTTGGTGTTGTGGAATATT+TGG + Chr8:3184801-3184820 MsG0880042053.01.T01:three_prime_UTR 35.0%
!!! CAGTGATTACTTTTTTGGAC+AGG + Chr8:3179402-3179421 MsG0880042053.01.T01:intron 35.0%
!!! TAACTGTTGCCTTGGTTTTA+TGG + Chr8:3176703-3176722 MsG0880042053.01.T01:intron 35.0%
!!! TCCTTTTAGTGTACTGGTTA+AGG + Chr8:3182392-3182411 MsG0880042053.01.T01:intron 35.0%
!!! TGGTTTTTTTGTTGGTGTTG+TGG + Chr8:3184792-3184811 MsG0880042053.01.T01:three_prime_UTR 35.0%
!!! TTGCGGTTATTTTTGACAGA+TGG + Chr8:3183185-3183204 MsG0880042053.01.T01:intron 35.0%
AAACAGCAATCTGTTCACGA+AGG - Chr8:3177077-3177096 None:intergenic 40.0%
AACAGCAATCTGTTCACGAA+GGG - Chr8:3177076-3177095 None:intergenic 40.0%
AACCATGTTGGAAGGAAGAT+AGG - Chr8:3180440-3180459 None:intergenic 40.0%
AACTACATACTCTGGATTCG+TGG - Chr8:3181018-3181037 None:intergenic 40.0%
AATCATGTTAAGAAGCCACC+AGG - Chr8:3179278-3179297 None:intergenic 40.0%
AATGATCTTGCTCGAAGGAA+AGG + Chr8:3177380-3177399 MsG0880042053.01.T01:CDS 40.0%
ACATTAGCATGCATTCACCA+TGG - Chr8:3183677-3183696 None:intergenic 40.0%
ACTTCGATACTCTCTCATCA+CGG + Chr8:3182216-3182235 MsG0880042053.01.T01:intron 40.0%
ACTTGACAGTAGAGTAGTGA+TGG + Chr8:3178599-3178618 MsG0880042053.01.T01:intron 40.0%
AGCAGTTGAGTGTATTCCAA+TGG + Chr8:3181064-3181083 MsG0880042053.01.T01:CDS 40.0%
ATCATGTTAAGAAGCCACCA+GGG - Chr8:3179277-3179296 None:intergenic 40.0%
ATGACAGGATATATGAACCC+AGG + Chr8:3179717-3179736 MsG0880042053.01.T01:CDS 40.0%
ATGCACCATAAAATTTGGGG+GGG - Chr8:3183922-3183941 None:intergenic 40.0%
ATTCAGAAGGGTCAACTATC+AGG + Chr8:3179764-3179783 MsG0880042053.01.T01:CDS 40.0%
ATTCCAACTGCCTATGTTTC+CGG - Chr8:3183810-3183829 None:intergenic 40.0%
ATTTCGACAAGGTTTCACAC+TGG + Chr8:3177681-3177700 MsG0880042053.01.T01:intron 40.0%
CAAATCCTAACCATTGGATC+AGG + Chr8:3180231-3180250 MsG0880042053.01.T01:intron 40.0%
CAACCAATGAGCAATATGAC+AGG + Chr8:3179702-3179721 MsG0880042053.01.T01:CDS 40.0%
CAATCTCATGCTGCATTTCT+GGG - Chr8:3182266-3182285 None:intergenic 40.0%
CCAACAGAGACTAATTCCAA+TGG - Chr8:3183762-3183781 None:intergenic 40.0%
CGTAATGTTAACTGTTGCCT+TGG + Chr8:3176695-3176714 MsG0880042053.01.T01:intron 40.0%
CTGCAGATTAAAGTTCCATG+TGG + Chr8:3183556-3183575 MsG0880042053.01.T01:intron 40.0%
CTGTCAAGTTCCGTCAAATA+CGG - Chr8:3178588-3178607 None:intergenic 40.0%
CTGTCATATTGCTCATTGGT+TGG - Chr8:3179704-3179723 None:intergenic 40.0%
GCGAGTAATGATCCACATAT+TGG - Chr8:3181506-3181525 None:intergenic 40.0%
GCTATCCTAGTTTCACTCTT+AGG - Chr8:3178232-3178251 None:intergenic 40.0%
GCTTAACAACGATGAGATTC+AGG + Chr8:3176616-3176635 MsG0880042053.01.T01:CDS 40.0%
GGAAACCCTTGACAATCATA+AGG - Chr8:3179862-3179881 None:intergenic 40.0%
GGAATCTCCTCATGTATTTC+TGG + Chr8:3178305-3178324 MsG0880042053.01.T01:intron 40.0%
GGAGAAAAACTTCTTGGATG+TGG + Chr8:3180691-3180710 MsG0880042053.01.T01:CDS 40.0%
TAACCATGCTGTTGAAAGTC+CGG + Chr8:3179474-3179493 MsG0880042053.01.T01:CDS 40.0%
TAGCCAAAGTAGTCCTTACA+AGG + Chr8:3176753-3176772 MsG0880042053.01.T01:intron 40.0%
TATATGAACCCAGGTGTTAG+TGG + Chr8:3179726-3179745 MsG0880042053.01.T01:CDS 40.0%
TCAATCTCATGCTGCATTTC+TGG - Chr8:3182267-3182286 None:intergenic 40.0%
TGCGCACACACATCAAATTA+AGG + Chr8:3178554-3178573 MsG0880042053.01.T01:intron 40.0%
TTACATCACCACTAACACCT+GGG - Chr8:3179737-3179756 None:intergenic 40.0%
TTCAGTGTTCAACTTCTGGT+AGG + Chr8:3182315-3182334 MsG0880042053.01.T01:intron 40.0%
TTCTAATGCTGCTGATAGGT+TGG + Chr8:3179791-3179810 MsG0880042053.01.T01:intron 40.0%
TTGCTCGTGAAAAAAGTTCC+TGG - Chr8:3177029-3177048 None:intergenic 40.0%
TTTACATCACCACTAACACC+TGG - Chr8:3179738-3179757 None:intergenic 40.0%
TTTGTGTTAACATGCTCGGA+TGG + Chr8:3183592-3183611 MsG0880042053.01.T01:CDS 40.0%
! AAAAGTAGCACCGGAAACAT+AGG + Chr8:3183797-3183816 MsG0880042053.01.T01:intron 40.0%
! AAGCCTTGTAAGGACTACTT+TGG - Chr8:3176759-3176778 None:intergenic 40.0%
! ATGTAAACGGAGCATTCAGA+AGG + Chr8:3179751-3179770 MsG0880042053.01.T01:CDS 40.0%
! ATTGCTAGCCTAAGATGTGT+AGG - Chr8:3182692-3182711 None:intergenic 40.0%
! ATTGCTGCTTCATGCATTTC+GGG + Chr8:3179201-3179220 MsG0880042053.01.T01:intron 40.0%
! CATCCAAGAAGTTTTTCTCC+AGG - Chr8:3180691-3180710 None:intergenic 40.0%
! CATTGCTGCTTCATGCATTT+CGG + Chr8:3179200-3179219 MsG0880042053.01.T01:intron 40.0%
! CCATTGGAATTAGTCTCTGT+TGG + Chr8:3183759-3183778 MsG0880042053.01.T01:intron 40.0%
! GACTTGGTTACTAACAAGAC+AGG + Chr8:3178860-3178879 MsG0880042053.01.T01:intron 40.0%
! GGTGTTAGTGGTGATGTAAA+CGG + Chr8:3179738-3179757 MsG0880042053.01.T01:CDS 40.0%
! TGTAAACGGAGCATTCAGAA+GGG + Chr8:3179752-3179771 MsG0880042053.01.T01:CDS 40.0%
! TTGCTAGCCTAAGATGTGTA+GGG - Chr8:3182691-3182710 None:intergenic 40.0%
!! CACAGGTATTGGATGACAAA+AGG + Chr8:3184664-3184683 MsG0880042053.01.T01:intron 40.0%
!!! AACTTTTTTCACGAGCAAGG+GGG + Chr8:3177031-3177050 MsG0880042053.01.T01:CDS 40.0%
!!! AGGAACTTTTTTCACGAGCA+AGG + Chr8:3177028-3177047 MsG0880042053.01.T01:intron 40.0%
!!! GAACTTTTTTCACGAGCAAG+GGG + Chr8:3177030-3177049 MsG0880042053.01.T01:CDS 40.0%
!!! GGAACTTTTTTCACGAGCAA+GGG + Chr8:3177029-3177048 MsG0880042053.01.T01:intron 40.0%
!!! GTTGCCTTGGTTTTATGGAT+TGG + Chr8:3176708-3176727 MsG0880042053.01.T01:intron 40.0%
AACCATGCTGTTGAAAGTCC+GGG + Chr8:3179475-3179494 MsG0880042053.01.T01:CDS 45.0%
AACGATGAGATTCAGGGTCA+AGG + Chr8:3176623-3176642 MsG0880042053.01.T01:CDS 45.0%
AATTGTGACGAGAGACCACA+TGG - Chr8:3183574-3183593 None:intergenic 45.0%
ACCTGTGTCTCCCCAAAATA+AGG - Chr8:3184651-3184670 None:intergenic 45.0%
ACTAGGCAGTACATTGAAGG+TGG + Chr8:3180869-3180888 MsG0880042053.01.T01:intron 45.0%
AGACAGGGTCCGAGAAAATA+AGG + Chr8:3178876-3178895 MsG0880042053.01.T01:intron 45.0%
ATATCCTAGCTAGTGGGATG+AGG + Chr8:3181560-3181579 MsG0880042053.01.T01:intron 45.0%
ATTCACATGGTGTGTGTGTG+TGG - Chr8:3181956-3181975 None:intergenic 45.0%
ATTGGCATGCAAGAGAGAAC+TGG + Chr8:3180471-3180490 MsG0880042053.01.T01:CDS 45.0%
CAAATCTTTCTAGATGGCCC+TGG + Chr8:3180631-3180650 MsG0880042053.01.T01:intron 45.0%
CCTTCGAGCAAGATCATTAG+CGG - Chr8:3177378-3177397 None:intergenic 45.0%
CTAGGATTGCTGGCAGAATA+TGG + Chr8:3178412-3178431 MsG0880042053.01.T01:CDS 45.0%
GACCTATCTTCCTTCCAACA+TGG + Chr8:3180435-3180454 MsG0880042053.01.T01:CDS 45.0%
GCAGCAACCAGAAATACATG+AGG - Chr8:3178315-3178334 None:intergenic 45.0%
GGTCAAGGCTCAGAATTTCT+AGG + Chr8:3176638-3176657 MsG0880042053.01.T01:CDS 45.0%
GTCATCTATGCTAGGATTGC+TGG + Chr8:3178402-3178421 MsG0880042053.01.T01:CDS 45.0%
GTGAAACTAGGATAGCATCG+CGG + Chr8:3178236-3178255 MsG0880042053.01.T01:intron 45.0%
TCGGCTGTAACTACATACTC+TGG - Chr8:3181026-3181045 None:intergenic 45.0%
TCTCGCGTTCTGCAAAGAAA+CGG - Chr8:3184136-3184155 None:intergenic 45.0%
TGACAGTAGAGTAGTGATGG+CGG + Chr8:3178602-3178621 MsG0880042053.01.T01:intron 45.0%
TGACTCCGGTTACCAATATG+TGG + Chr8:3181491-3181510 MsG0880042053.01.T01:intron 45.0%
TGATGCACTTAATCACGCTC+AGG + Chr8:3176843-3176862 MsG0880042053.01.T01:CDS 45.0%
TGATGCCGCAATTTAGTCAG+CGG - Chr8:3184442-3184461 None:intergenic 45.0%
TGCACCATAAAATTTGGGGG+GGG - Chr8:3183921-3183940 None:intergenic 45.0%
TGCTGGCAGAATATGGTTTG+TGG + Chr8:3178419-3178438 MsG0880042053.01.T01:CDS 45.0%
TTCACATGGTGTGTGTGTGT+GGG - Chr8:3181955-3181974 None:intergenic 45.0%
! AAGCAGCATCAAGCCTTGTA+AGG - Chr8:3176769-3176788 None:intergenic 45.0%
! AAGGCTCAGAATTTCTAGGC+AGG + Chr8:3176642-3176661 MsG0880042053.01.T01:CDS 45.0%
! GATAAGTGGTACTGAAGCTG+CGG + Chr8:3183269-3183288 MsG0880042053.01.T01:CDS 45.0%
! TCTTGCCGCTGACTAAATTG+CGG + Chr8:3184434-3184453 MsG0880042053.01.T01:intron 45.0%
! TGTAACAGTATGGCTGACTC+CGG + Chr8:3181477-3181496 MsG0880042053.01.T01:intron 45.0%
!! ACTGCTTCCTCTGTTTCTGA+GGG + Chr8:3180555-3180574 MsG0880042053.01.T01:CDS 45.0%
!! TGAGAGAGTATCGAAGTCGA+AGG - Chr8:3182213-3182232 None:intergenic 45.0%
!! TTTTGGGGAGACACAGGTAT+TGG + Chr8:3184653-3184672 MsG0880042053.01.T01:intron 45.0%
!!! ACCTTATTTTGGGGAGACAC+AGG + Chr8:3184647-3184666 MsG0880042053.01.T01:intron 45.0%
!! ATAATATTAATAACAAATAT+AGG - Chr8:3180263-3180282 None:intergenic 5.0%
!! TAATATTAATAACAAATATA+GGG - Chr8:3180262-3180281 None:intergenic 5.0%
!!! AAAAAATTCTTTTTTTTTAA+TGG + Chr8:3180934-3180953 MsG0880042053.01.T01:intron 5.0%
AACCCGGACTTTCAACAGCA+TGG - Chr8:3179480-3179499 None:intergenic 50.0%
AATGGACGATAAAGGCCGTC+AGG + Chr8:3181082-3181101 MsG0880042053.01.T01:CDS 50.0%
AATTCCTGGGTTCGTGTCAG+TGG + Chr8:3180825-3180844 MsG0880042053.01.T01:intron 50.0%
ACCATAAAATTTGGGGGGGG+GGG - Chr8:3183918-3183937 None:intergenic 50.0%
AGCTCCCAAAGAGATCGCAA+AGG + Chr8:3182807-3182826 MsG0880042053.01.T01:intron 50.0%
ATCTGCGGTGATGCTATTCC+TGG + Chr8:3180670-3180689 MsG0880042053.01.T01:CDS 50.0%
ATTCCTGGGTTCGTGTCAGT+GGG + Chr8:3180826-3180845 MsG0880042053.01.T01:intron 50.0%
CAAAGAGAAGTTCGACGGAC+TGG - Chr8:3180721-3180740 None:intergenic 50.0%
CAATCTGTTCACGAAGGGAG+AGG - Chr8:3177071-3177090 None:intergenic 50.0%
CACCATAAAATTTGGGGGGG+GGG - Chr8:3183919-3183938 None:intergenic 50.0%
CACGCCTTTGCGATCTCTTT+GGG - Chr8:3182814-3182833 None:intergenic 50.0%
CATGCGACTCTTCCAGAGTA+AGG + Chr8:3184171-3184190 MsG0880042053.01.T01:CDS 50.0%
CCGCTAATGATCTTGCTCGA+AGG + Chr8:3177375-3177394 MsG0880042053.01.T01:CDS 50.0%
CTCGCGTTCTGCAAAGAAAC+GGG - Chr8:3184135-3184154 None:intergenic 50.0%
CTGTCTTACTTTCTCCCTGG+TGG + Chr8:3179260-3179279 MsG0880042053.01.T01:intron 50.0%
GCACCATAAAATTTGGGGGG+GGG - Chr8:3183920-3183939 None:intergenic 50.0%
GGCACTAGGCAGTACATTGA+AGG + Chr8:3180866-3180885 MsG0880042053.01.T01:CDS 50.0%
GTCTCGTCATGCTCATGTGA+AGG - Chr8:3180537-3180556 None:intergenic 50.0%
GTGTGTGGGGGGTTTAGATA+TGG - Chr8:3181941-3181960 None:intergenic 50.0%
TAGGTCATTGCCTGCAAGCA+AGG - Chr8:3177629-3177648 None:intergenic 50.0%
TCACATGGTGTGTGTGTGTG+GGG - Chr8:3181954-3181973 None:intergenic 50.0%
TCACGCCTTTGCGATCTCTT+TGG - Chr8:3182815-3182834 None:intergenic 50.0%
TCGCGTTCTGCAAAGAAACG+GGG - Chr8:3184134-3184153 None:intergenic 50.0%
TCTGTTAAAAGCCCTTCGCG+CGG + Chr8:3176593-3176612 MsG0880042053.01.T01:CDS 50.0%
TGACGGCCTTTATCGTCCAT+TGG - Chr8:3181083-3181102 None:intergenic 50.0%
TGCATCTGGAGAGGAATGCT+TGG - Chr8:3182904-3182923 None:intergenic 50.0%
TGGCTGTCTTACTTTCTCCC+TGG + Chr8:3179257-3179276 MsG0880042053.01.T01:intron 50.0%
TTTGTCGGATTTGCGGAACC+CGG - Chr8:3179496-3179515 None:intergenic 50.0%
! AAATAGCGGAAGCCGCATAG+TGG + Chr8:3177913-3177932 MsG0880042053.01.T01:intron 50.0%
! CTTACTCTGGAAGAGTCGCA+TGG - Chr8:3184173-3184192 None:intergenic 50.0%
!! AGTAGTGATGGCGGAGATCA+TGG + Chr8:3178611-3178630 MsG0880042053.01.T01:intron 50.0%
!! GAAGAGGCATTCATAACGCG+AGG - Chr8:3178445-3178464 None:intergenic 50.0%
!! GACTGCTTCCTCTGTTTCTG+AGG + Chr8:3180554-3180573 MsG0880042053.01.T01:CDS 50.0%
!! GAGAGTATCGAAGTCGAAGG+TGG - Chr8:3182210-3182229 None:intergenic 50.0%
!! TCACTATTCTGGGGTGCATC+TGG - Chr8:3182918-3182937 None:intergenic 50.0%
ACATGGTGTGTGTGTGTGGG+GGG - Chr8:3181952-3181971 None:intergenic 55.0%
AGAGCCTCATCCCACTAGCT+AGG - Chr8:3181567-3181586 None:intergenic 55.0%
ATAAAATTTGGGGGGGGGGG+GGG - Chr8:3183915-3183934 None:intergenic 55.0%
ATAGAGCCGCGGGCAAATAG+CGG + Chr8:3177899-3177918 MsG0880042053.01.T01:intron 55.0%
CACATGGTGTGTGTGTGTGG+GGG - Chr8:3181953-3181972 None:intergenic 55.0%
CATAAAATTTGGGGGGGGGG+GGG - Chr8:3183916-3183935 None:intergenic 55.0%
CATACGCAAGGTTCGGGAAG+GGG - Chr8:3183863-3183882 None:intergenic 55.0%
CCATAAAATTTGGGGGGGGG+GGG - Chr8:3183917-3183936 None:intergenic 55.0%
CCATACAGTGCCTTGCTTGC+AGG + Chr8:3177616-3177635 MsG0880042053.01.T01:intron 55.0%
CCTAACCATTGGATCAGGGC+AGG + Chr8:3180236-3180255 MsG0880042053.01.T01:intron 55.0%
CCTGCCCTGATCCAATGGTT+AGG - Chr8:3180239-3180258 None:intergenic 55.0%
CGCTCAGGACCTAGACACTA+TGG + Chr8:3176858-3176877 MsG0880042053.01.T01:CDS 55.0%
CTAAAGCTCCCGCATACGCA+AGG - Chr8:3183875-3183894 None:intergenic 55.0%
CTCTAAGCACAGTGAACGCC+CGG + Chr8:3183626-3183645 MsG0880042053.01.T01:CDS 55.0%
CTGTTAAAAGCCCTTCGCGC+GGG + Chr8:3176594-3176613 MsG0880042053.01.T01:CDS 55.0%
CTTCCCGAACCTTGCGTATG+CGG + Chr8:3183863-3183882 MsG0880042053.01.T01:intron 55.0%
GCACCGGAAACATAGGCAGT+TGG + Chr8:3183804-3183823 MsG0880042053.01.T01:intron 55.0%
GCATACGCAAGGTTCGGGAA+GGG - Chr8:3183864-3183883 None:intergenic 55.0%
GGCATCTTCAGGATGGCACT+AGG + Chr8:3180852-3180871 MsG0880042053.01.T01:CDS 55.0%
TCTCTGCGCAAGTTCTTCCG+TGG - Chr8:3180417-3180436 None:intergenic 55.0%
TGGGTTCGGCATCTTCAGGA+TGG + Chr8:3180845-3180864 MsG0880042053.01.T01:CDS 55.0%
TTCCCGAACCTTGCGTATGC+GGG + Chr8:3183864-3183883 MsG0880042053.01.T01:intron 55.0%
TTCGGGAAGGGGTCCCAAAT+TGG - Chr8:3183852-3183871 None:intergenic 55.0%
TTTGTCAGGGGGAGCTAGTG+AGG + Chr8:3181824-3181843 MsG0880042053.01.T01:intron 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + Chr8:3183880-3183899 MsG0880042053.01.T01:intron 55.0%
! ATGGCGGAGATCATGGAGGA+TGG + Chr8:3178618-3178637 MsG0880042053.01.T01:intron 55.0%
! CTTGATGCTGCTTGTGCTGC+AGG + Chr8:3176776-3176795 MsG0880042053.01.T01:intron 55.0%
! GAAAGGGAGAGCATGACCAC+GGG + Chr8:3184686-3184705 MsG0880042053.01.T01:exon 55.0%
! GGAAAGGGAGAGCATGACCA+CGG + Chr8:3184685-3184704 MsG0880042053.01.T01:exon 55.0%
! TCAGTGGGTTCGGCATCTTC+AGG + Chr8:3180841-3180860 MsG0880042053.01.T01:intron 55.0%
! TGCGGCAGTCTCAGAAGTGT+TGG - Chr8:3179061-3179080 None:intergenic 55.0%
! TGGGTTCGTGTCAGTGGGTT+CGG + Chr8:3180831-3180850 MsG0880042053.01.T01:intron 55.0%
!! AGTGATGGCGGAGATCATGG+AGG + Chr8:3178614-3178633 MsG0880042053.01.T01:intron 55.0%
!! ATTCTGGGGTGCATCTGGAG+AGG - Chr8:3182913-3182932 None:intergenic 55.0%
!! CCTGCAAGCAAGGCACTGTA+TGG - Chr8:3177619-3177638 None:intergenic 55.0%
ACGAGCAAGGGGGCAAGAAG+AGG + Chr8:3177041-3177060 MsG0880042053.01.T01:CDS 60.0%
CGCATACGCAAGGTTCGGGA+AGG - Chr8:3183865-3183884 None:intergenic 60.0%
CGGGCGTTCACTGTGCTTAG+AGG - Chr8:3183628-3183647 None:intergenic 60.0%
CGTTGTTAAGCCCGCGCGAA+GGG - Chr8:3176607-3176626 None:intergenic 60.0%
CTCCCGCATACGCAAGGTTC+GGG - Chr8:3183869-3183888 None:intergenic 60.0%
GAACCCACTGACACGAACCC+AGG - Chr8:3180832-3180851 None:intergenic 60.0%
GCTCCCGCATACGCAAGGTT+CGG - Chr8:3183870-3183889 None:intergenic 60.0%
TAAAATTTGGGGGGGGGGGG+GGG - Chr8:3183914-3183933 None:intergenic 60.0%
TAGGGCCTGCCCTGATCCAA+TGG - Chr8:3180244-3180263 None:intergenic 60.0%
TCGTTGTTAAGCCCGCGCGA+AGG - Chr8:3176608-3176627 None:intergenic 60.0%
! AGCATGACCACGGGTTGCCA+CGG + Chr8:3184695-3184714 MsG0880042053.01.T01:exon 60.0%
! CCCCCCCCCCCCAAATTTTA+TGG + Chr8:3183914-3183933 MsG0880042053.01.T01:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + Chr8:3183881-3183900 MsG0880042053.01.T01:intron 60.0%
AAAATTTGGGGGGGGGGGGG+GGG - Chr8:3183913-3183932 None:intergenic 65.0%
CGGCTTCCGCTATTTGCCCG+CGG - Chr8:3177908-3177927 None:intergenic 65.0%
GGATTGACCGTGGCAACCCG+TGG - Chr8:3184705-3184724 None:intergenic 65.0%
AAATTTGGGGGGGGGGGGGG+GGG - Chr8:3183912-3183931 None:intergenic 70.0%
AATTTGGGGGGGGGGGGGGG+GGG - Chr8:3183911-3183930 None:intergenic 75.0%
! ATTTGGGGGGGGGGGGGGGG+GGG - Chr8:3183910-3183929 None:intergenic 80.0%
! GGGGGGGGGGGGGGGCAGCC+CGG - Chr8:3183902-3183921 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr8 gene 3176587 3185151 3176587 ID=MsG0880042053.01;Name=MsG0880042053.01
Chr8 mRNA 3176587 3185151 3176587 ID=MsG0880042053.01.T01;Parent=MsG0880042053.01;Name=MsG0880042053.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0.87|1|1|0.62|0.58|17|450|484
Chr8 exon 3176587 3176663 3176587 ID=MsG0880042053.01.T01:exon:2079;Parent=MsG0880042053.01.T01
Chr8 exon 3176798 3176879 3176798 ID=MsG0880042053.01.T01:exon:2080;Parent=MsG0880042053.01.T01
Chr8 exon 3177030 3177107 3177030 ID=MsG0880042053.01.T01:exon:2081;Parent=MsG0880042053.01.T01
Chr8 exon 3177186 3177245 3177186 ID=MsG0880042053.01.T01:exon:2082;Parent=MsG0880042053.01.T01
Chr8 exon 3177338 3177442 3177338 ID=MsG0880042053.01.T01:exon:2083;Parent=MsG0880042053.01.T01
Chr8 exon 3178373 3178483 3178373 ID=MsG0880042053.01.T01:exon:2084;Parent=MsG0880042053.01.T01
Chr8 exon 3179424 3179537 3179424 ID=MsG0880042053.01.T01:exon:2085;Parent=MsG0880042053.01.T01
Chr8 exon 3179651 3179808 3179651 ID=MsG0880042053.01.T01:exon:2086;Parent=MsG0880042053.01.T01
Chr8 exon 3180434 3180576 3180434 ID=MsG0880042053.01.T01:exon:2087;Parent=MsG0880042053.01.T01
Chr8 exon 3180644 3180750 3180644 ID=MsG0880042053.01.T01:exon:2088;Parent=MsG0880042053.01.T01
Chr8 exon 3180845 3180887 3180845 ID=MsG0880042053.01.T01:exon:2089;Parent=MsG0880042053.01.T01
Chr8 exon 3181012 3181103 3181012 ID=MsG0880042053.01.T01:exon:2090;Parent=MsG0880042053.01.T01
Chr8 exon 3183204 3183323 3183204 ID=MsG0880042053.01.T01:exon:2091;Parent=MsG0880042053.01.T01
Chr8 exon 3183562 3183647 3183562 ID=MsG0880042053.01.T01:exon:2092;Parent=MsG0880042053.01.T01
Chr8 exon 3184147 3184192 3184147 ID=MsG0880042053.01.T01:exon:2093;Parent=MsG0880042053.01.T01
Chr8 exon 3184669 3185151 3184669 ID=MsG0880042053.01.T01:exon:2094;Parent=MsG0880042053.01.T01
Chr8 CDS 3176587 3176663 3176587 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3176798 3176879 3176798 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3177030 3177107 3177030 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3177186 3177245 3177186 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3177338 3177442 3177338 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3178373 3178483 3178373 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3179424 3179537 3179424 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3179651 3179808 3179651 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3180434 3180576 3180434 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3180644 3180750 3180644 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3180845 3180887 3180845 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3181012 3181103 3181012 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3183204 3183323 3183204 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3183562 3183647 3183562 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3184147 3184192 3184147 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 CDS 3184669 3184701 3184669 ID=MsG0880042053.01.T01:cds;Parent=MsG0880042053.01.T01
Chr8 three_prime_UTR 3184702 3185151 3184702 ID=MsG0880042053.01.T01:three_prime_utr;Parent=MsG0880042053.01.T01
Gene Sequence

>MsG0880042053.01.T01

ATGTCTTCTGTTAAAAGCCCTTCGCGCGGGCTTAACAACGATGAGATTCAGGGTCAAGGCTCAGAATTTCTAGGCAGGCACAATCTTGAAAAACAACTGGCTCAAAGCAATTTCAAAAGCAATGATGCACTTAATCACGCTCAGGACCTAGACACTATGGAACTTTTTTCACGAGCAAGGGGGCAAGAAGAGGAGATCCTCTCCCTTCGTGAACAGATTGCTGTTTCTTGTATGAAGGAGTTGCAGCTAGTGAATGAGAAATGCAAACTAGAGAGGGAATTTTCGGAATTAAGAATGGCAATTGATGACAAGCAAAATGAAGCTATCACATCTGCCGCTAATGATCTTGCTCGAAGGAAAGGTTATCTAGAAGAAAATTTAAAACTTGCCCATGATTTGAAAATTGCAGAGGACGAGCGATATATCTTCATGTCATCTATGCTAGGATTGCTGGCAGAATATGGTTTGTGGCCTCGCGTTATGAATGCCTCTTCAGTATCCAACTATGTAAAGGATAGAATTGGAGAGTTAACTTCTGGGCAAGAAATTCATGCAGATAATGGTAACCATGCTGTTGAAAGTCCGGGTTCCGCAAATCCGACAAATCACATTCATAATGAATTCATGTTTCAGCATAACATTCCCCAGCAAAATCTTATTGGCAATGAACAAAATCACCAACCAATGAGCAATATGACAGGATATATGAACCCAGGTGTTAGTGGTGATGTAAACGGAGCATTCAGAAGGGTCAACTATCAGGAGATTTCTAATGCTGCTGATAGAGACCTATCTTCCTTCCAACATGGTTTAATTGATCAAATTGGCATGCAAGAGAGAACTGGTGAAAGACAATTTTTAAATGGCAATATCAACTTGTATCAACCTTCACATGAGCATGACGAGACTGCTTCCTCTGTTTCTGAGGATGGCCCTGGCATTGAGAATTTTCAAATCTGCGGTGATGCTATTCCTGGAGAAAAACTTCTTGGATGTGGATATCCAGTCCGTCGAACTTCTCTTTGTATGTTTCAGTGGGTTCGGCATCTTCAGGATGGCACTAGGCAGTACATTGAAGGAGCCACGAATCCAGAGTATGTAGTTACAGCCGATGATGTCGATAAACTGATAGCAGTTGAGTGTATTCCAATGGACGATAAAGGCCGTCAGATGGATTCTTCTGAAAATTGGGAACAAGCAACTCTATTCTTAAGACGATCAGGATACCAAATTAAGATAAGTGGTACTGAAGCTGCGGTAGTTTCTGAGAAATTCTCAAAGGACTTATCGATTAAAGTTCCATGTGGTCTCTCGTCACAATTTGTGTTAACATGCTCGGATGGATCTTCTCATCCTCTAAGCACAGTGAACGCCCGAACGCGAGACACACTTGTGTTAACCATGCGACTCTTCCAGAGTAAGGTATTGGATGACAAAAGGAAAGGGAGAGCATGA

Protein sequence

>MsG0880042053.01.T01

MSSVKSPSRGLNNDEIQGQGSEFLGRHNLEKQLAQSNFKSNDALNHAQDLDTMELFSRARGQEEEILSLREQIAVSCMKELQLVNEKCKLEREFSELRMAIDDKQNEAITSAANDLARRKGYLEENLKLAHDLKIAEDERYIFMSSMLGLLAEYGLWPRVMNASSVSNYVKDRIGELTSGQEIHADNGNHAVESPGSANPTNHIHNEFMFQHNIPQQNLIGNEQNHQPMSNMTGYMNPGVSGDVNGAFRRVNYQEISNAADRDLSSFQHGLIDQIGMQERTGERQFLNGNINLYQPSHEHDETASSVSEDGPGIENFQICGDAIPGEKLLGCGYPVRRTSLCMFQWVRHLQDGTRQYIEGATNPEYVVTADDVDKLIAVECIPMDDKGRQMDSSENWEQATLFLRRSGYQIKISGTEAAVVSEKFSKDLSIKVPCGLSSQFVLTCSDGSSHPLSTVNARTRDTLVLTMRLFQSKVLDDKRKGRA*