Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048928.01.T01 | RHN70535.1 | 98.284 | 408 | 7 | 0 | 1 | 408 | 24 | 431 | 0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048928.01.T01 | A0MFS5 | 37.097 | 372 | 196 | 8 | 10 | 363 | 73 | 424 | 3.63E-58 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048928.01.T01 | A0A396J2B4 | 98.284 | 408 | 7 | 0 | 1 | 408 | 24 | 431 | 0.0 | 822 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047825.01 | MsG0080048928.01 | 0.831558 | 1.559715e-55 | 1.698719e-52 |
| MsG0080048928.01 | MsG0180000001.01 | 0.813322 | 2.714758e-51 | 1.767269e-48 |
| MsG0080048928.01 | MsG0180000065.01 | 0.811021 | 8.622027e-51 | 5.279101e-48 |
| MsG0080048928.01 | MsG0180000402.01 | 0.818434 | 1.964061e-52 | 1.470139e-49 |
| MsG0080048928.01 | MsG0180000555.01 | 0.839510 | 1.517812e-57 | 2.100715e-54 |
| MsG0080048928.01 | MsG0180000604.01 | 0.800359 | 1.495375e-48 | 6.949185e-46 |
| MsG0080048928.01 | MsG0180000680.01 | 0.805027 | 1.627249e-49 | 8.518406e-47 |
| MsG0080048928.01 | MsG0180000702.01 | 0.807733 | 4.376798e-50 | 2.456591e-47 |
| MsG0080048928.01 | MsG0180000741.01 | 0.856338 | 3.443158e-62 | 8.191040e-59 |
| MsG0080048928.01 | MsG0180000797.01 | 0.815757 | 7.851313e-52 | 5.460912e-49 |
| MsG0080048928.01 | MsG0180000821.01 | 0.812998 | 3.196366e-51 | 2.062615e-48 |
| MsG0080048928.01 | MsG0180000855.01 | 0.819667 | 1.029649e-52 | 7.974214e-50 |
| MsG0080048928.01 | MsG0180001030.01 | 0.810452 | 1.144430e-50 | 6.900883e-48 |
| MsG0080048928.01 | MsG0180001173.01 | 0.849101 | 4.014088e-60 | 7.527592e-57 |
| MsG0080048928.01 | MsG0180001178.01 | 0.803028 | 4.238870e-49 | 2.107774e-46 |
| MsG0080048928.01 | MsG0180001565.01 | 0.802959 | 4.379359e-49 | 2.173861e-46 |
| MsG0080048928.01 | MsG0180001566.01 | 0.839446 | 1.577268e-57 | 2.178791e-54 |
| MsG0080048928.01 | MsG0180001662.01 | 0.800697 | 1.276080e-48 | 5.980799e-46 |
| MsG0080048928.01 | MsG0180001911.01 | 0.817590 | 3.047000e-52 | 2.228207e-49 |
| MsG0080048928.01 | MsG0180002071.01 | 0.834386 | 3.087880e-56 | 3.658854e-53 |
| MsG0080048928.01 | MsG0180002075.01 | 0.833271 | 5.870425e-56 | 6.726688e-53 |
| MsG0080048928.01 | MsG0180002870.01 | 0.813606 | 2.350426e-51 | 1.541981e-48 |
| MsG0080048928.01 | MsG0180002894.01 | 0.837447 | 5.170541e-57 | 6.718482e-54 |
| MsG0080048928.01 | MsG0180002952.01 | 0.840489 | 8.434627e-58 | 1.203354e-54 |
| MsG0080048928.01 | MsG0180003303.01 | 0.814212 | 1.727966e-51 | 1.152339e-48 |
| MsG0080048928.01 | MsG0180003444.01 | 0.848132 | 7.446149e-60 | 1.352869e-56 |
| MsG0080048928.01 | MsG0180003807.01 | 0.817872 | 2.631603e-52 | 1.939437e-49 |
| MsG0080048928.01 | MsG0180003822.01 | 0.804957 | 1.683459e-49 | 8.797398e-47 |
| MsG0080048928.01 | MsG0180004272.01 | 0.805009 | 1.641852e-49 | 8.590895e-47 |
| MsG0080048928.01 | MsG0180004372.01 | 0.801374 | 9.281797e-49 | 4.425451e-46 |
| MsG0080048928.01 | MsG0180004385.01 | 0.823794 | 1.143042e-53 | 9.942432e-51 |
| MsG0080048928.01 | MsG0180004388.01 | 0.817970 | 2.500815e-52 | 1.847922e-49 |
| MsG0080048928.01 | MsG0180004437.01 | 0.810861 | 9.337836e-51 | 5.692863e-48 |
| MsG0080048928.01 | MsG0180004486.01 | 0.808141 | 3.583801e-50 | 2.033208e-47 |
| MsG0080048928.01 | MsG0180004730.01 | 0.828747 | 7.571803e-55 | 7.593198e-52 |
| MsG0080048928.01 | MsG0180004943.01 | 0.802380 | 5.765737e-49 | 2.820375e-46 |
| MsG0080048928.01 | MsG0180005050.01 | 0.805716 | 1.167014e-49 | 6.218738e-47 |
| MsG0080048928.01 | MsG0180005233.01 | 0.820413 | 6.951038e-53 | 5.496450e-50 |
| MsG0080048928.01 | MsG0180005304.01 | 0.842148 | 3.085284e-58 | 4.635396e-55 |
| MsG0080048928.01 | MsG0180005443.01 | 0.806569 | 7.719290e-50 | 4.203855e-47 |
| MsG0080048928.01 | MsG0180005445.01 | 0.826664 | 2.395952e-54 | 2.261529e-51 |
| MsG0080048928.01 | MsG0180005451.01 | 0.822194 | 2.699206e-53 | 2.243415e-50 |
| MsG0080048928.01 | MsG0180005507.01 | 0.805868 | 1.084199e-49 | 5.799973e-47 |
| MsG0080048928.01 | MsG0180005763.01 | 0.801244 | 9.867107e-49 | 4.689297e-46 |
| MsG0080048928.01 | MsG0180005944.01 | 0.809217 | 2.109897e-50 | 1.231552e-47 |
| MsG0080048928.01 | MsG0180006023.01 | 0.838097 | 3.520897e-57 | 4.666729e-54 |
| MsG0080048928.01 | MsG0180006225.01 | 0.805054 | 1.606504e-49 | 8.415912e-47 |
| MsG0080048928.01 | MsG0280006367.01 | 0.825783 | 3.883210e-54 | 3.574652e-51 |
| MsG0080048928.01 | MsG0280006601.01 | 0.801733 | 7.834162e-49 | 3.769186e-46 |
| MsG0080048928.01 | MsG0280006692.01 | 0.809824 | 1.563219e-50 | 9.272630e-48 |
| MsG0080048928.01 | MsG0280007048.01 | 0.812263 | 4.629875e-51 | 2.929988e-48 |
| MsG0080048928.01 | MsG0280007484.01 | 0.811221 | 7.801868e-51 | 4.801887e-48 |
| MsG0080048928.01 | MsG0280007496.01 | 0.800482 | 1.411850e-48 | 6.581132e-46 |
| MsG0080048928.01 | MsG0280007609.01 | 0.812292 | 4.562955e-51 | 2.889914e-48 |
| MsG0080048928.01 | MsG0280007764.01 | 0.813414 | 2.590558e-51 | 1.690709e-48 |
| MsG0080048928.01 | MsG0280007818.01 | 0.802196 | 6.292194e-49 | 3.063155e-46 |
| MsG0080048928.01 | MsG0280007826.01 | 0.824607 | 7.365969e-54 | 6.557198e-51 |
| MsG0080048928.01 | MsG0280007984.01 | 0.818119 | 2.314377e-52 | 1.717229e-49 |
| MsG0080048928.01 | MsG0280008004.01 | 0.820022 | 8.540894e-53 | 6.681205e-50 |
| MsG0080048928.01 | MsG0280008030.01 | 0.824129 | 9.538529e-54 | 8.374807e-51 |
| MsG0080048928.01 | MsG0280008100.01 | 0.813820 | 2.109409e-51 | 1.391869e-48 |
| MsG0080048928.01 | MsG0280008270.01 | 0.817085 | 3.958644e-52 | 2.855131e-49 |
| MsG0080048928.01 | MsG0280008363.01 | 0.807518 | 4.859792e-50 | 2.712543e-47 |
| MsG0080048928.01 | MsG0280008615.01 | 0.802406 | 5.695321e-49 | 2.787698e-46 |
| MsG0080048928.01 | MsG0280009748.01 | 0.845282 | 4.475800e-59 | 7.421739e-56 |
| MsG0080048928.01 | MsG0280010109.01 | 0.847000 | 1.525020e-59 | 2.672595e-56 |
| MsG0080048928.01 | MsG0280010239.01 | 0.819097 | 1.389093e-52 | 1.058874e-49 |
| MsG0080048928.01 | MsG0280010443.01 | 0.811989 | 5.312686e-51 | 3.337038e-48 |
| MsG0080048928.01 | MsG0280010447.01 | 0.800754 | 1.242549e-48 | 5.832043e-46 |
| MsG0080048928.01 | MsG0280010614.01 | 0.810003 | 1.430261e-50 | 8.524172e-48 |
| MsG0080048928.01 | MsG0280010816.01 | 0.828021 | 1.133036e-54 | 1.112658e-51 |
| MsG0080048928.01 | MsG0280011070.01 | 0.811764 | 5.948029e-51 | 3.713633e-48 |
| MsG0080048928.01 | MsG0280011129.01 | 0.821803 | 3.324343e-53 | 2.732586e-50 |
| MsG0080048928.01 | MsG0280011131.01 | 0.800094 | 1.693338e-48 | 7.816032e-46 |
| MsG0080048928.01 | MsG0280011163.01 | 0.820568 | 6.403792e-53 | 5.085050e-50 |
| MsG0080048928.01 | MsG0280011293.01 | 0.856140 | 3.934772e-62 | 9.298248e-59 |
| MsG0080048928.01 | MsG0280011334.01 | 0.814235 | 1.708483e-51 | 1.140089e-48 |
| MsG0080048928.01 | MsG0280011336.01 | 0.840698 | 7.435860e-58 | 1.067757e-54 |
| MsG0080048928.01 | MsG0380012020.01 | 0.824929 | 6.184921e-54 | 5.556585e-51 |
| MsG0080048928.01 | MsG0380012034.01 | 0.820988 | 5.127336e-53 | 4.119906e-50 |
| MsG0080048928.01 | MsG0380012458.01 | 0.821356 | 4.217144e-53 | 3.423013e-50 |
| MsG0080048928.01 | MsG0380013068.01 | 0.804607 | 1.992180e-49 | 1.031635e-46 |
| MsG0080048928.01 | MsG0380013686.01 | 0.808481 | 3.032800e-50 | 1.736066e-47 |
| MsG0080048928.01 | MsG0380013834.01 | 0.828695 | 7.792669e-55 | 7.803557e-52 |
| MsG0080048928.01 | MsG0380014118.01 | 0.808350 | 3.233715e-50 | 1.844772e-47 |
| MsG0080048928.01 | MsG0380014573.01 | 0.812016 | 5.240930e-51 | 3.294374e-48 |
| MsG0080048928.01 | MsG0380014576.01 | 0.831196 | 1.914178e-55 | 2.062283e-52 |
| MsG0080048928.01 | MsG0380014880.01 | 0.857480 | 1.586334e-62 | 3.920763e-59 |
| MsG0080048928.01 | MsG0380014949.01 | 0.801889 | 7.275358e-49 | 3.514568e-46 |
| MsG0080048928.01 | MsG0380015332.01 | 0.818908 | 1.533524e-52 | 1.162975e-49 |
| MsG0080048928.01 | MsG0380015436.01 | 0.803572 | 3.269272e-49 | 1.648674e-46 |
| MsG0080048928.01 | MsG0380015614.01 | 0.804090 | 2.552150e-49 | 1.304204e-46 |
| MsG0080048928.01 | MsG0380015702.01 | 0.821406 | 4.105746e-53 | 3.337278e-50 |
| MsG0080048928.01 | MsG0380015893.01 | 0.850205 | 1.973542e-60 | 3.836340e-57 |
| MsG0080048928.01 | MsG0380015980.01 | 0.806025 | 1.005129e-49 | 5.398453e-47 |
| MsG0080048928.01 | MsG0380016209.01 | 0.808736 | 2.674477e-50 | 1.541056e-47 |
| MsG0080048928.01 | MsG0380016247.01 | 0.804289 | 2.319997e-49 | 1.191618e-46 |
| MsG0080048928.01 | MsG0380016483.01 | 0.836215 | 1.066399e-56 | 1.335142e-53 |
| MsG0080048928.01 | MsG0380016505.01 | 0.800350 | 1.502189e-48 | 6.979050e-46 |
| MsG0080048928.01 | MsG0380016561.01 | 0.800722 | 1.261068e-48 | 5.914250e-46 |
| MsG0080048928.01 | MsG0380016859.01 | 0.814917 | 1.207053e-51 | 8.203988e-49 |
| MsG0080048928.01 | MsG0380016905.01 | 0.808002 | 3.835653e-50 | 2.168107e-47 |
| MsG0080048928.01 | MsG0380017177.01 | 0.813386 | 2.627468e-51 | 1.713496e-48 |
| MsG0080048928.01 | MsG0380017195.01 | 0.807598 | 4.674935e-50 | 2.614541e-47 |
| MsG0080048928.01 | MsG0380017232.01 | 0.811136 | 8.139850e-51 | 4.998739e-48 |
| MsG0080048928.01 | MsG0380017233.01 | 0.828467 | 8.846882e-55 | 8.801021e-52 |
| MsG0080048928.01 | MsG0380017266.01 | -0.820872 | 5.450625e-53 | 4.365372e-50 |
| MsG0080048928.01 | MsG0380017335.01 | 0.995669 | 1.247659e-218 | 1.884873e-211 |
| MsG0080048928.01 | MsG0380017375.01 | 0.814056 | 1.870715e-51 | 1.242292e-48 |
| MsG0080048928.01 | MsG0380017431.01 | 0.837359 | 5.446992e-57 | 7.057731e-54 |
| MsG0080048928.01 | MsG0380017498.01 | 0.814504 | 1.489370e-51 | 1.001219e-48 |
| MsG0080048928.01 | MsG0380017631.01 | 0.800895 | 1.162826e-48 | 5.477835e-46 |
| MsG0080048928.01 | MsG0380017941.01 | 0.807061 | 6.074459e-50 | 3.350366e-47 |
| MsG0080048928.01 | MsG0480018251.01 | 0.824360 | 8.420216e-54 | 7.441387e-51 |
| MsG0080048928.01 | MsG0480018321.01 | 0.801610 | 8.300552e-49 | 3.981160e-46 |
| MsG0080048928.01 | MsG0480018637.01 | 0.802997 | 4.300884e-49 | 2.136896e-46 |
| MsG0080048928.01 | MsG0480018640.01 | 0.829695 | 4.457792e-55 | 4.597186e-52 |
| MsG0080048928.01 | MsG0480019289.01 | 0.816793 | 4.603931e-52 | 3.294100e-49 |
| MsG0080048928.01 | MsG0480019442.01 | 0.800371 | 1.487029e-48 | 6.912556e-46 |
| MsG0080048928.01 | MsG0480019493.01 | 0.814304 | 1.649019e-51 | 1.102530e-48 |
| MsG0080048928.01 | MsG0480019970.01 | 0.833907 | 4.072968e-56 | 4.757497e-53 |
| MsG0080048928.01 | MsG0480020242.01 | 0.821894 | 3.166949e-53 | 2.610016e-50 |
| MsG0080048928.01 | MsG0480020331.01 | 0.811316 | 7.442242e-51 | 4.591715e-48 |
| MsG0080048928.01 | MsG0480020540.01 | 0.839878 | 1.217677e-57 | 1.704471e-54 |
| MsG0080048928.01 | MsG0480020634.01 | 0.808211 | 3.461456e-50 | 1.967513e-47 |
| MsG0080048928.01 | MsG0480020719.01 | 0.805380 | 1.372834e-49 | 7.252179e-47 |
| MsG0080048928.01 | MsG0480020720.01 | 0.811462 | 6.918030e-51 | 4.285021e-48 |
| MsG0080048928.01 | MsG0480021061.01 | 0.802736 | 4.869105e-49 | 2.403410e-46 |
| MsG0080048928.01 | MsG0480021426.01 | 0.807336 | 5.312932e-50 | 2.951430e-47 |
| MsG0080048928.01 | MsG0480021778.01 | 0.829492 | 4.993818e-55 | 5.118998e-52 |
| MsG0080048928.01 | MsG0480021784.01 | 0.822772 | 1.981138e-53 | 1.674105e-50 |
| MsG0080048928.01 | MsG0480021896.01 | -0.815153 | 1.069488e-51 | 7.315891e-49 |
| MsG0080048928.01 | MsG0480021900.01 | 0.842837 | 2.025537e-58 | 3.109567e-55 |
| MsG0080048928.01 | MsG0480021918.01 | 0.801874 | 7.329669e-49 | 3.539341e-46 |
| MsG0080048928.01 | MsG0480022094.01 | 0.859810 | 3.196194e-63 | 8.550058e-60 |
| MsG0080048928.01 | MsG0480022115.01 | 0.858170 | 9.898869e-63 | 2.503850e-59 |
| MsG0080048928.01 | MsG0480022228.01 | 0.821574 | 3.755847e-53 | 3.067197e-50 |
| MsG0080048928.01 | MsG0480022259.01 | 0.805685 | 1.184915e-49 | 6.308997e-47 |
| MsG0080048928.01 | MsG0480022262.01 | 0.805079 | 1.587275e-49 | 8.320451e-47 |
| MsG0080048928.01 | MsG0480022318.01 | 0.812335 | 4.465777e-51 | 2.831702e-48 |
| MsG0080048928.01 | MsG0480022451.01 | 0.802666 | 5.035052e-49 | 2.480686e-46 |
| MsG0080048928.01 | MsG0480022597.01 | 0.846298 | 2.370901e-59 | 4.062128e-56 |
| MsG0080048928.01 | MsG0480022598.01 | 0.839412 | 1.609671e-57 | 2.221251e-54 |
| MsG0080048928.01 | MsG0480023172.01 | 0.809968 | 1.455488e-50 | 8.666277e-48 |
| MsG0080048928.01 | MsG0480023251.01 | 0.802754 | 4.828510e-49 | 2.384421e-46 |
| MsG0080048928.01 | MsG0480023377.01 | 0.814753 | 1.312261e-51 | 8.880012e-49 |
| MsG0080048928.01 | MsG0480023488.01 | 0.822928 | 1.821962e-53 | 1.546381e-50 |
| MsG0080048928.01 | MsG0480023500.01 | 0.800547 | 1.369119e-48 | 6.392569e-46 |
| MsG0080048928.01 | MsG0480023554.01 | 0.803089 | 4.117092e-49 | 2.050347e-46 |
| MsG0080048928.01 | MsG0480023654.01 | 0.804757 | 1.853663e-49 | 9.636929e-47 |
| MsG0080048928.01 | MsG0480023718.01 | 0.823637 | 1.244320e-53 | 1.077497e-50 |
| MsG0080048928.01 | MsG0480023873.01 | 0.821864 | 3.218953e-53 | 2.650564e-50 |
| MsG0080048928.01 | MsG0580024114.01 | 0.817150 | 3.829206e-52 | 2.766662e-49 |
| MsG0080048928.01 | MsG0580024157.01 | 0.865722 | 4.805894e-65 | 1.579553e-61 |
| MsG0080048928.01 | MsG0580024304.01 | 0.812342 | 4.448523e-51 | 2.821290e-48 |
| MsG0080048928.01 | MsG0580024418.01 | 0.801924 | 7.157924e-49 | 3.460627e-46 |
| MsG0080048928.01 | MsG0580024421.01 | 0.847943 | 8.396985e-60 | 1.516678e-56 |
| MsG0080048928.01 | MsG0580024618.01 | 0.800554 | 1.365079e-48 | 6.374797e-46 |
| MsG0080048928.01 | MsG0580024682.01 | 0.822735 | 2.020304e-53 | 1.705454e-50 |
| MsG0080048928.01 | MsG0580024733.01 | 0.816940 | 4.266595e-52 | 3.065318e-49 |
| MsG0080048928.01 | MsG0580024960.01 | 0.827194 | 1.790214e-54 | 1.716070e-51 |
| MsG0080048928.01 | MsG0580025008.01 | 0.815304 | 9.899051e-52 | 6.799760e-49 |
| MsG0080048928.01 | MsG0580025025.01 | 0.815192 | 1.048468e-51 | 7.179638e-49 |
| MsG0080048928.01 | MsG0580025184.01 | 0.818668 | 1.737935e-52 | 1.309182e-49 |
| MsG0080048928.01 | MsG0580025352.01 | 0.810326 | 1.218758e-50 | 7.324645e-48 |
| MsG0080048928.01 | MsG0580025532.01 | 0.809977 | 1.449141e-50 | 8.630493e-48 |
| MsG0080048928.01 | MsG0580025555.01 | 0.803253 | 3.808127e-49 | 1.904578e-46 |
| MsG0080048928.01 | MsG0580025900.01 | 0.832473 | 9.264226e-56 | 1.036560e-52 |
| MsG0080048928.01 | MsG0580025907.01 | 0.818152 | 2.275241e-52 | 1.689693e-49 |
| MsG0080048928.01 | MsG0580026002.01 | 0.800456 | 1.429309e-48 | 6.658149e-46 |
| MsG0080048928.01 | MsG0580026595.01 | 0.804169 | 2.458064e-49 | 1.258635e-46 |
| MsG0080048928.01 | MsG0580027261.01 | 0.815972 | 7.029143e-52 | 4.917641e-49 |
| MsG0080048928.01 | MsG0580027628.01 | 0.822105 | 2.829751e-53 | 2.345996e-50 |
| MsG0080048928.01 | MsG0580028747.01 | 0.817627 | 2.989772e-52 | 2.188567e-49 |
| MsG0080048928.01 | MsG0580029189.01 | 0.800720 | 1.262412e-48 | 5.920205e-46 |
| MsG0080048928.01 | MsG0580029198.01 | 0.822415 | 2.397724e-53 | 2.005664e-50 |
| MsG0080048928.01 | MsG0580029208.01 | 0.802991 | 4.314373e-49 | 2.143255e-46 |
| MsG0080048928.01 | MsG0580029327.01 | 0.818943 | 1.505481e-52 | 1.142872e-49 |
| MsG0080048928.01 | MsG0580029444.01 | 0.815168 | 1.061514e-51 | 7.264064e-49 |
| MsG0080048928.01 | MsG0580029550.01 | 0.803749 | 3.004581e-49 | 1.522005e-46 |
| MsG0080048928.01 | MsG0580029622.01 | 0.833047 | 6.672361e-56 | 7.595511e-53 |
| MsG0080048928.01 | MsG0580029629.01 | 0.821205 | 4.569575e-53 | 3.693800e-50 |
| MsG0080048928.01 | MsG0580029639.01 | 0.820628 | 6.203158e-53 | 4.933697e-50 |
| MsG0080048928.01 | MsG0580029704.01 | 0.816325 | 5.861349e-52 | 4.140669e-49 |
| MsG0080048928.01 | MsG0580029801.01 | 0.811647 | 6.305741e-51 | 3.924617e-48 |
| MsG0080048928.01 | MsG0580030204.01 | 0.811754 | 5.976635e-51 | 3.730568e-48 |
| MsG0080048928.01 | MsG0580030235.01 | 0.814008 | 1.916749e-51 | 1.271213e-48 |
| MsG0080048928.01 | MsG0680030321.01 | 0.838378 | 2.980594e-57 | 3.984790e-54 |
| MsG0080048928.01 | MsG0680030684.01 | 0.812128 | 4.954169e-51 | 3.123727e-48 |
| MsG0080048928.01 | MsG0680030685.01 | 0.810294 | 1.237971e-50 | 7.433754e-48 |
| MsG0080048928.01 | MsG0680031114.01 | 0.814537 | 1.464555e-51 | 9.853549e-49 |
| MsG0080048928.01 | MsG0680031133.01 | 0.806854 | 6.719319e-50 | 3.686308e-47 |
| MsG0080048928.01 | MsG0680031654.01 | 0.802424 | 5.647609e-49 | 2.765602e-46 |
| MsG0080048928.01 | MsG0680033302.01 | 0.800298 | 1.538925e-48 | 7.140558e-46 |
| MsG0080048928.01 | MsG0680033392.01 | 0.809510 | 1.825944e-50 | 1.074109e-47 |
| MsG0080048928.01 | MsG0680034739.01 | 0.805084 | 1.583588e-49 | 8.302112e-47 |
| MsG0080048928.01 | MsG0680034757.01 | 0.848383 | 6.348485e-60 | 1.162920e-56 |
| MsG0080048928.01 | MsG0680035764.01 | 0.824240 | 8.983551e-54 | 7.912102e-51 |
| MsG0080048928.01 | MsG0780036018.01 | 0.805969 | 1.032470e-49 | 5.537515e-47 |
| MsG0080048928.01 | MsG0780036609.01 | 0.801146 | 1.033448e-48 | 4.899222e-46 |
| MsG0080048928.01 | MsG0780036630.01 | 0.801576 | 8.436405e-49 | 4.042927e-46 |
| MsG0080048928.01 | MsG0780036696.01 | 0.804805 | 1.810775e-49 | 9.425824e-47 |
| MsG0080048928.01 | MsG0780036773.01 | 0.810042 | 1.402835e-50 | 8.369221e-48 |
| MsG0080048928.01 | MsG0780036789.01 | 0.810268 | 1.254463e-50 | 7.527748e-48 |
| MsG0080048928.01 | MsG0780036950.01 | 0.837293 | 5.663435e-57 | 7.323412e-54 |
| MsG0080048928.01 | MsG0780037975.01 | 0.821372 | 4.180616e-53 | 3.394883e-50 |
| MsG0080048928.01 | MsG0780038051.01 | 0.815436 | 9.251921e-52 | 6.378577e-49 |
| MsG0080048928.01 | MsG0780038092.01 | 0.807206 | 5.660314e-50 | 3.133770e-47 |
| MsG0080048928.01 | MsG0780038391.01 | 0.801411 | 9.117864e-49 | 4.351373e-46 |
| MsG0080048928.01 | MsG0780038401.01 | 0.807904 | 4.024758e-50 | 2.268934e-47 |
| MsG0080048928.01 | MsG0780038443.01 | 0.810030 | 1.411639e-50 | 8.419054e-48 |
| MsG0080048928.01 | MsG0780038602.01 | 0.838776 | 2.352565e-57 | 3.183650e-54 |
| MsG0080048928.01 | MsG0780038603.01 | 0.812788 | 3.554338e-51 | 2.280682e-48 |
| MsG0080048928.01 | MsG0780038644.01 | 0.836491 | 9.071433e-57 | 1.144965e-53 |
| MsG0080048928.01 | MsG0780039655.01 | 0.816725 | 4.768767e-52 | 3.405656e-49 |
| MsG0080048928.01 | MsG0780039712.01 | 0.812015 | 5.244243e-51 | 3.296344e-48 |
| MsG0080048928.01 | MsG0780039717.01 | 0.843748 | 1.157785e-58 | 1.829167e-55 |
| MsG0080048928.01 | MsG0780039777.01 | 0.846782 | 1.749118e-59 | 3.044396e-56 |
| MsG0080048928.01 | MsG0780039845.01 | 0.830316 | 3.145662e-55 | 3.302352e-52 |
| MsG0080048928.01 | MsG0780040044.01 | 0.844510 | 7.230418e-59 | 1.169952e-55 |
| MsG0080048928.01 | MsG0780040261.01 | 0.801210 | 1.002707e-48 | 4.761110e-46 |
| MsG0080048928.01 | MsG0780040389.01 | 0.801369 | 9.303874e-49 | 4.435489e-46 |
| MsG0080048928.01 | MsG0780040488.01 | 0.838791 | 2.331491e-57 | 3.156577e-54 |
| MsG0080048928.01 | MsG0780040591.01 | 0.809228 | 2.098786e-50 | 1.225428e-47 |
| MsG0080048928.01 | MsG0780040669.01 | 0.805259 | 1.455300e-49 | 7.663558e-47 |
| MsG0080048928.01 | MsG0780040726.01 | 0.807946 | 3.941924e-50 | 2.224845e-47 |
| MsG0080048928.01 | MsG0780040947.01 | 0.803681 | 3.103433e-49 | 1.569297e-46 |
| MsG0080048928.01 | MsG0780041033.01 | 0.836413 | 9.496186e-57 | 1.195831e-53 |
| MsG0080048928.01 | MsG0780041101.01 | 0.802893 | 4.518502e-49 | 2.239236e-46 |
| MsG0080048928.01 | MsG0780041127.01 | 0.801611 | 8.299785e-49 | 3.980845e-46 |
| MsG0080048928.01 | MsG0780041192.01 | 0.803094 | 4.107226e-49 | 2.045693e-46 |
| MsG0080048928.01 | MsG0780041229.01 | 0.810767 | 9.787811e-51 | 5.952077e-48 |
| MsG0080048928.01 | MsG0780041300.01 | 0.826471 | 2.664438e-54 | 2.500996e-51 |
| MsG0080048928.01 | MsG0780041305.01 | 0.809413 | 1.915992e-50 | 1.124233e-47 |
| MsG0080048928.01 | MsG0780041469.01 | 0.823739 | 1.177727e-53 | 1.022868e-50 |
| MsG0080048928.01 | MsG0780041671.01 | 0.840427 | 8.754017e-58 | 1.246491e-54 |
| MsG0080048928.01 | MsG0880042053.01 | 0.833126 | 6.379333e-56 | 7.279006e-53 |
| MsG0080048928.01 | MsG0880042161.01 | 0.814799 | 1.281427e-51 | 8.682478e-49 |
| MsG0080048928.01 | MsG0880042543.01 | 0.808172 | 3.528881e-50 | 2.003775e-47 |
| MsG0080048928.01 | MsG0880042829.01 | 0.825952 | 3.540565e-54 | 3.274968e-51 |
| MsG0080048928.01 | MsG0880043059.01 | 0.801926 | 7.148556e-49 | 3.456341e-46 |
| MsG0080048928.01 | MsG0880043480.01 | 0.825643 | 4.190723e-54 | 3.842242e-51 |
| MsG0080048928.01 | MsG0880043522.01 | 0.818466 | 1.932055e-52 | 1.447439e-49 |
| MsG0080048928.01 | MsG0880044237.01 | 0.807118 | 5.909128e-50 | 3.263886e-47 |
| MsG0080048928.01 | MsG0880044574.01 | 0.804031 | 2.625216e-49 | 1.339526e-46 |
| MsG0080048928.01 | MsG0880044732.01 | 0.837647 | 4.594004e-57 | 6.006702e-54 |
| MsG0080048928.01 | MsG0880044917.01 | 0.802705 | 4.942550e-49 | 2.437661e-46 |
| MsG0080048928.01 | MsG0880045415.01 | 0.809620 | 1.728907e-50 | 1.020107e-47 |
| MsG0080048928.01 | MsG0880045448.01 | 0.813065 | 3.090589e-51 | 1.997841e-48 |
| MsG0080048928.01 | MsG0880045583.01 | 0.812742 | 3.636944e-51 | 2.331071e-48 |
| MsG0080048928.01 | MsG0880045639.01 | 0.819366 | 1.206024e-52 | 9.261351e-50 |
| MsG0080048928.01 | MsG0880045756.01 | 0.814532 | 1.468614e-51 | 9.879536e-49 |
| MsG0080048928.01 | MsG0880045803.01 | 0.815480 | 9.047000e-52 | 6.245201e-49 |
| MsG0080048928.01 | MsG0880046027.01 | 0.825752 | 3.950133e-54 | 3.632883e-51 |
| MsG0080048928.01 | MsG0880046091.01 | 0.801024 | 1.094304e-48 | 5.172092e-46 |
| MsG0080048928.01 | MsG0880046669.01 | 0.801443 | 8.983441e-49 | 4.290671e-46 |
| MsG0080048928.01 | MsG0880046762.01 | 0.827637 | 1.401523e-54 | 1.360757e-51 |
| MsG0080048928.01 | MsG0880046921.01 | 0.810817 | 9.543103e-51 | 5.811116e-48 |
| MsG0080048928.01 | MsG0880047294.01 | 0.801065 | 1.073424e-48 | 5.078480e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048928.01.T01 | MTR_3g105530 | 98.284 | 408 | 7 | 0 | 1 | 408 | 24 | 431 | 0.0 | 816 |
| MsG0080048928.01.T01 | MTR_0153s0070 | 89.461 | 408 | 8 | 1 | 1 | 408 | 1 | 373 | 0.0 | 724 |
| MsG0080048928.01.T01 | MTR_0153s0070 | 98.361 | 305 | 5 | 0 | 1 | 305 | 31 | 335 | 0.0 | 617 |
| MsG0080048928.01.T01 | MTR_7g117270 | 34.384 | 349 | 206 | 6 | 37 | 378 | 110 | 442 | 2.01e-50 | 178 |
| MsG0080048928.01.T01 | MTR_6g033595 | 31.877 | 389 | 244 | 8 | 1 | 374 | 36 | 418 | 1.50e-47 | 169 |
| MsG0080048928.01.T01 | MTR_1g072550 | 33.237 | 346 | 213 | 6 | 17 | 354 | 39 | 374 | 1.10e-45 | 162 |
| MsG0080048928.01.T01 | MTR_7g088530 | 34.024 | 338 | 196 | 10 | 67 | 399 | 99 | 414 | 2.99e-45 | 162 |
| MsG0080048928.01.T01 | MTR_1g032040 | 33.140 | 344 | 212 | 6 | 19 | 354 | 41 | 374 | 1.89e-44 | 159 |
| MsG0080048928.01.T01 | MTR_1g032380 | 33.140 | 344 | 212 | 6 | 19 | 354 | 41 | 374 | 1.89e-44 | 159 |
| MsG0080048928.01.T01 | MTR_8g089370 | 31.962 | 316 | 202 | 7 | 34 | 344 | 58 | 365 | 4.86e-41 | 150 |
| MsG0080048928.01.T01 | MTR_2g067960 | 31.300 | 377 | 221 | 9 | 37 | 381 | 37 | 407 | 5.18e-40 | 148 |
| MsG0080048928.01.T01 | MTR_7g107280 | 29.016 | 386 | 238 | 10 | 34 | 401 | 53 | 420 | 1.05e-38 | 144 |
| MsG0080048928.01.T01 | MTR_1g019170 | 30.882 | 340 | 211 | 7 | 2 | 340 | 14 | 330 | 2.99e-38 | 143 |
| MsG0080048928.01.T01 | MTR_3g029990 | 31.765 | 340 | 208 | 8 | 2 | 340 | 14 | 330 | 1.31e-37 | 144 |
| MsG0080048928.01.T01 | MTR_3g029990 | 31.765 | 340 | 208 | 8 | 2 | 340 | 14 | 330 | 1.56e-37 | 144 |
| MsG0080048928.01.T01 | MTR_3g074730 | 32.248 | 307 | 193 | 6 | 39 | 340 | 83 | 379 | 4.42e-36 | 137 |
| MsG0080048928.01.T01 | MTR_1g098960 | 32.776 | 299 | 177 | 8 | 43 | 340 | 57 | 332 | 9.97e-36 | 136 |
| MsG0080048928.01.T01 | MTR_3g030020 | 33.333 | 282 | 166 | 7 | 60 | 340 | 27 | 287 | 1.27e-35 | 135 |
| MsG0080048928.01.T01 | MTR_3g083350 | 31.498 | 327 | 187 | 8 | 38 | 344 | 81 | 390 | 9.24e-33 | 130 |
| MsG0080048928.01.T01 | MTR_6g043850 | 28.895 | 353 | 228 | 9 | 19 | 363 | 36 | 373 | 1.03e-30 | 124 |
| MsG0080048928.01.T01 | MTR_3g063230 | 27.273 | 363 | 235 | 9 | 2 | 349 | 43 | 391 | 9.48e-30 | 119 |
| MsG0080048928.01.T01 | MTR_7g018630 | 28.025 | 314 | 215 | 5 | 32 | 344 | 72 | 375 | 4.11e-28 | 115 |
| MsG0080048928.01.T01 | MTR_4g053720 | 28.116 | 345 | 213 | 7 | 7 | 334 | 18 | 344 | 1.05e-24 | 104 |
| MsG0080048928.01.T01 | MTR_3g063230 | 27.401 | 354 | 222 | 12 | 2 | 349 | 43 | 367 | 6.01e-23 | 100 |
| MsG0080048928.01.T01 | MTR_3g448960 | 28.094 | 299 | 166 | 10 | 43 | 340 | 57 | 307 | 3.52e-22 | 98.6 |
| MsG0080048928.01.T01 | MTR_8g102038 | 31.771 | 192 | 113 | 5 | 92 | 274 | 56 | 238 | 1.83e-15 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048928.01.T01 | AT5G21970 | 66.839 | 386 | 119 | 5 | 1 | 385 | 43 | 420 | 0.0 | 519 |
| MsG0080048928.01.T01 | AT5G21970 | 66.839 | 386 | 119 | 5 | 1 | 385 | 43 | 420 | 0.0 | 519 |
| MsG0080048928.01.T01 | AT4G01037 | 37.097 | 372 | 196 | 8 | 10 | 363 | 73 | 424 | 3.70e-59 | 201 |
| MsG0080048928.01.T01 | AT4G33495 | 33.773 | 379 | 223 | 11 | 2 | 365 | 38 | 403 | 5.72e-48 | 169 |
| MsG0080048928.01.T01 | AT3G63090 | 31.467 | 375 | 238 | 7 | 12 | 379 | 40 | 402 | 2.87e-47 | 167 |
| MsG0080048928.01.T01 | AT5G48040 | 32.295 | 353 | 209 | 8 | 18 | 356 | 44 | 380 | 7.54e-45 | 160 |
| MsG0080048928.01.T01 | AT1G79120 | 32.070 | 343 | 211 | 6 | 15 | 345 | 64 | 396 | 3.62e-44 | 159 |
| MsG0080048928.01.T01 | AT1G79120 | 32.070 | 343 | 211 | 6 | 15 | 345 | 64 | 396 | 3.62e-44 | 159 |
| MsG0080048928.01.T01 | AT2G31290 | 31.285 | 358 | 217 | 7 | 14 | 364 | 29 | 364 | 5.37e-43 | 155 |
| MsG0080048928.01.T01 | AT2G31290 | 31.285 | 358 | 217 | 7 | 14 | 364 | 29 | 364 | 5.37e-43 | 155 |
| MsG0080048928.01.T01 | AT5G45790 | 31.088 | 386 | 236 | 10 | 2 | 377 | 60 | 425 | 7.22e-41 | 150 |
| MsG0080048928.01.T01 | AT5G45790 | 33.613 | 357 | 200 | 11 | 38 | 377 | 4 | 340 | 9.66e-41 | 148 |
| MsG0080048928.01.T01 | AT4G08940 | 31.529 | 314 | 194 | 6 | 34 | 340 | 83 | 382 | 1.05e-40 | 149 |
| MsG0080048928.01.T01 | AT5G62990 | 35.152 | 330 | 176 | 9 | 35 | 344 | 81 | 392 | 2.59e-40 | 150 |
| MsG0080048928.01.T01 | AT3G58520 | 32.827 | 329 | 202 | 8 | 33 | 349 | 55 | 376 | 2.85e-40 | 148 |
| MsG0080048928.01.T01 | AT1G06440 | 30.000 | 360 | 223 | 8 | 2 | 344 | 23 | 370 | 3.29e-36 | 137 |
| MsG0080048928.01.T01 | AT3G58520 | 34.138 | 290 | 174 | 7 | 72 | 349 | 80 | 364 | 4.46e-36 | 137 |
| MsG0080048928.01.T01 | AT1G71850 | 27.461 | 386 | 261 | 7 | 7 | 387 | 25 | 396 | 4.24e-34 | 132 |
| MsG0080048928.01.T01 | AT4G24320 | 28.767 | 292 | 195 | 6 | 68 | 352 | 78 | 363 | 2.72e-23 | 101 |
| MsG0080048928.01.T01 | AT2G39120 | 27.707 | 314 | 216 | 6 | 32 | 344 | 52 | 355 | 2.88e-23 | 100 |
Find 73 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAACTGGAATAACCATTTC+TGG | 0.211698 | contig546end:-10196 | None:intergenic |
| AAAAGGGTGCATAGTTATTA+TGG | 0.236478 | contig546end:+10730 | MsG0080048928.01.T01:CDS |
| TCAGAGATTCTGTGAGGTTT+TGG | 0.253264 | contig546end:-10253 | None:intergenic |
| CTTAGTCTTGTTGGCTATAG+AGG | 0.357273 | contig546end:+11090 | MsG0080048928.01.T01:CDS |
| TTGTTTCTTGGAATTCTGAA+TGG | 0.380201 | contig546end:+10593 | MsG0080048928.01.T01:CDS |
| ACAGGAAATTTCAAAGGAAA+TGG | 0.381695 | contig546end:-10700 | None:intergenic |
| GGATGTGGAGCTTGAGCAAC+AGG | 0.382512 | contig546end:+11206 | MsG0080048928.01.T01:CDS |
| AGCTCTATAAGGATCGTAAC+GGG | 0.395197 | contig546end:+10305 | MsG0080048928.01.T01:CDS |
| GAGAAGCTTCTTAGTCTTGT+TGG | 0.399437 | contig546end:+11081 | MsG0080048928.01.T01:CDS |
| AACAGAAGCTTATGATGGTT+CGG | 0.405777 | contig546end:+11023 | MsG0080048928.01.T01:CDS |
| AAACCCTTTGCATCAGCATA+AGG | 0.409922 | contig546end:-10793 | None:intergenic |
| AAGATCGAAGCAAGAAGAAA+AGG | 0.422615 | contig546end:+10092 | MsG0080048928.01.T01:CDS |
| ACTCCCAACGGAAGTGAGTT+AGG | 0.429164 | contig546end:-10909 | None:intergenic |
| AAGCAAACCCGGGGTGTGTT+CGG | 0.431409 | contig546end:-10671 | None:intergenic |
| AGGATCGTAACGGGGTGTTA+TGG | 0.444477 | contig546end:+10314 | MsG0080048928.01.T01:CDS |
| TCTCCTTATGCTGATGCAAA+GGG | 0.446830 | contig546end:+10790 | MsG0080048928.01.T01:CDS |
| TCGAAGCAGCAACAGAGAAA+TGG | 0.448143 | contig546end:+10125 | MsG0080048928.01.T01:CDS |
| GTTCTTTAGAATTCGATAAG+AGG | 0.449761 | contig546end:+10824 | MsG0080048928.01.T01:CDS |
| TTTATAACTTATTGAGGAGG+AGG | 0.454242 | contig546end:+11309 | MsG0080048928.01.T01:three_prime_UTR |
| TGATTCTGATGTGGAGGACT+TGG | 0.465301 | contig546end:+11185 | MsG0080048928.01.T01:CDS |
| GATTCTGAGATGGATGTTAG+AGG | 0.467647 | contig546end:+11264 | MsG0080048928.01.T01:CDS |
| TCTCGAACAAGAACCAGAAA+TGG | 0.467938 | contig546end:+10183 | MsG0080048928.01.T01:CDS |
| TGTTTCTTGGAATTCTGAAT+GGG | 0.470467 | contig546end:+10594 | MsG0080048928.01.T01:CDS |
| CTTCTTCTCAATCTCTGTGA+TGG | 0.477726 | contig546end:-10617 | None:intergenic |
| TAATGTGAAAGAGATCGAAC+TGG | 0.482436 | contig546end:-10211 | None:intergenic |
| AGATCGAAGCAAGAAGAAAA+GGG | 0.484434 | contig546end:+10093 | MsG0080048928.01.T01:CDS |
| GTCTCCTTATGCTGATGCAA+AGG | 0.487202 | contig546end:+10789 | MsG0080048928.01.T01:CDS |
| GAATAAGACGATTGTGGAAG+GGG | 0.488073 | contig546end:+10639 | MsG0080048928.01.T01:CDS |
| GAAGAAGAATAAGACGATTG+TGG | 0.490121 | contig546end:+10633 | MsG0080048928.01.T01:CDS |
| AATGGTAGCGAAAGCAAACC+CGG | 0.509498 | contig546end:-10682 | None:intergenic |
| AGGAAGGAAGAAGAAGTTTG+AGG | 0.519477 | contig546end:+11110 | MsG0080048928.01.T01:CDS |
| TCAGAATCGTCCTCGAGTAA+AGG | 0.523469 | contig546end:-11249 | None:intergenic |
| AAGAATAAGACGATTGTGGA+AGG | 0.524672 | contig546end:+10637 | MsG0080048928.01.T01:CDS |
| TATTAAATTGCATGTTCTTG+AGG | 0.525501 | contig546end:-11362 | None:intergenic |
| TTCTTTAGAATTCGATAAGA+GGG | 0.527132 | contig546end:+10825 | MsG0080048928.01.T01:CDS |
| TACTAGGTTGCTTATGATGT+CGG | 0.530829 | contig546end:+10423 | MsG0080048928.01.T01:CDS |
| GGTTGATAAACGTGTTCAGT+TGG | 0.531073 | contig546end:+10444 | MsG0080048928.01.T01:CDS |
| GATGCAAAGGGTTTGAAACC+TGG | 0.532506 | contig546end:+10802 | MsG0080048928.01.T01:CDS |
| AAGCTGCTGAATATGTTACT+AGG | 0.532919 | contig546end:+10407 | MsG0080048928.01.T01:CDS |
| CAATGAGTTCTAAAATCCAT+TGG | 0.537215 | contig546end:-10502 | None:intergenic |
| TCACCTAACTCACTTCCGTT+GGG | 0.539444 | contig546end:+10906 | MsG0080048928.01.T01:CDS |
| AGTGATGAGGAAGGCGGTGA+TGG | 0.540545 | contig546end:+11144 | MsG0080048928.01.T01:CDS |
| TTTGATGGAAGAACACAAAA+GGG | 0.543427 | contig546end:+10363 | MsG0080048928.01.T01:CDS |
| ACAGGATACCTTGGAGTACA+AGG | 0.547237 | contig546end:+11224 | MsG0080048928.01.T01:CDS |
| AACTGAAACCGAACACACCC+CGG | 0.548649 | contig546end:+10663 | MsG0080048928.01.T01:CDS |
| ATCACCTAACTCACTTCCGT+TGG | 0.553764 | contig546end:+10905 | MsG0080048928.01.T01:CDS |
| TTATCGAATTCTAAAGAACC+AGG | 0.555066 | contig546end:-10820 | None:intergenic |
| ACTGAAACCGAACACACCCC+GGG | 0.560385 | contig546end:+10664 | MsG0080048928.01.T01:CDS |
| GTCTTGTTGGCTATAGAGGA+AGG | 0.560921 | contig546end:+11094 | MsG0080048928.01.T01:CDS |
| AAATTTACAGGAAATTTCAA+AGG | 0.561249 | contig546end:-10706 | None:intergenic |
| GCTTGAGCAACAGGATACCT+TGG | 0.563372 | contig546end:+11215 | MsG0080048928.01.T01:CDS |
| TGATGTGGAGGACTTGGATG+TGG | 0.571180 | contig546end:+11191 | MsG0080048928.01.T01:CDS |
| ATTCTGAGATGGATGTTAGA+GGG | 0.571949 | contig546end:+11265 | MsG0080048928.01.T01:CDS |
| AACTCAACATCGTCAAGAGA+AGG | 0.575314 | contig546end:-10562 | None:intergenic |
| TTATGCCTCAGAAGTTGATG+AGG | 0.583152 | contig546end:+10935 | MsG0080048928.01.T01:CDS |
| ACTCGAGGACGATTCTGAGA+TGG | 0.584295 | contig546end:+11254 | MsG0080048928.01.T01:CDS |
| AGAATAAGACGATTGTGGAA+GGG | 0.588082 | contig546end:+10638 | MsG0080048928.01.T01:CDS |
| GCTTCAGAGTGATTCTGATG+TGG | 0.588652 | contig546end:+11176 | MsG0080048928.01.T01:CDS |
| CGTAACGGGGTGTTATGGTG+TGG | 0.588860 | contig546end:+10319 | MsG0080048928.01.T01:CDS |
| GGCGGATAGTGATAGTGATG+AGG | 0.590246 | contig546end:+11131 | MsG0080048928.01.T01:CDS |
| GAGCTCTATAAGGATCGTAA+CGG | 0.593963 | contig546end:+10304 | MsG0080048928.01.T01:CDS |
| TAAAGGATCCTTGTACTCCA+AGG | 0.600584 | contig546end:-11232 | None:intergenic |
| AAGGAAGAAGAAGTTTGAGG+CGG | 0.603463 | contig546end:+11113 | MsG0080048928.01.T01:CDS |
| TCAGAGTGATTCTGATGTGG+AGG | 0.607726 | contig546end:+11179 | MsG0080048928.01.T01:CDS |
| AAAAGCCTCATCAACTTCTG+AGG | 0.608858 | contig546end:-10940 | None:intergenic |
| AGTGATAGTGATGAGGAAGG+CGG | 0.642676 | contig546end:+11138 | MsG0080048928.01.T01:CDS |
| GATAGTGATAGTGATGAGGA+AGG | 0.653348 | contig546end:+11135 | MsG0080048928.01.T01:CDS |
| GAGGCATAACTAACTCCCAA+CGG | 0.662694 | contig546end:-10921 | None:intergenic |
| ATGGTAGCGAAAGCAAACCC+GGG | 0.662877 | contig546end:-10681 | None:intergenic |
| GTACAAGGATCCTTTACTCG+AGG | 0.671532 | contig546end:+11239 | MsG0080048928.01.T01:CDS |
| GCTCTATAAGGATCGTAACG+GGG | 0.700866 | contig546end:+10306 | MsG0080048928.01.T01:CDS |
| AGAAAATCAGAGATTCTGTG+AGG | 0.714200 | contig546end:-10259 | None:intergenic |
| TGGTAGCGAAAGCAAACCCG+GGG | 0.722533 | contig546end:-10680 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATGTATACTAAATAA+AGG | + | contig546end:11443-11462 | MsG0080048928.01.T01:three_prime_UTR | 10.0% |
| !!! | AATTTCCTGTAAATTTTAAA+AGG | + | contig546end:10713-10732 | MsG0080048928.01.T01:CDS | 15.0% |
| !!! | ATTTCCTGTAAATTTTAAAA+GGG | + | contig546end:10714-10733 | MsG0080048928.01.T01:CDS | 15.0% |
| !!! | CAAAATTTTATAACTTATTG+AGG | + | contig546end:11303-11322 | MsG0080048928.01.T01:three_prime_UTR | 15.0% |
| !! | AAATTTACAGGAAATTTCAA+AGG | - | contig546end:10709-10728 | None:intergenic | 20.0% |
| !! | TGAAAAGATAAAAATGTTTC+AGG | + | contig546end:10753-10772 | MsG0080048928.01.T01:CDS | 20.0% |
| !!! | AATTTTATAACTTATTGAGG+AGG | + | contig546end:11306-11325 | MsG0080048928.01.T01:three_prime_UTR | 20.0% |
| !!! | TATTTTTTATGTTTCTGAGA+GGG | + | contig546end:10978-10997 | MsG0080048928.01.T01:CDS | 20.0% |
| ! | TATAGAGCTCAAAAAGTTTA+GGG | - | contig546end:10294-10313 | None:intergenic | 25.0% |
| ! | TATTAAATTGCATGTTCTTG+AGG | - | contig546end:11365-11384 | None:intergenic | 25.0% |
| ! | TTATAGAGCTCAAAAAGTTT+AGG | - | contig546end:10295-10314 | None:intergenic | 25.0% |
| !! | TTTTTAACAGAAGCTTATGA+TGG | + | contig546end:11018-11037 | MsG0080048928.01.T01:CDS | 25.0% |
| !!! | AATGGATTTTAGAACTCATT+GGG | + | contig546end:10504-10523 | MsG0080048928.01.T01:CDS | 25.0% |
| !!! | AGAAATCTCCTTTGTTTTTA+TGG | + | contig546end:11055-11074 | MsG0080048928.01.T01:CDS | 25.0% |
| !!! | ATTTTTTATGTTTCTGAGAG+GGG | + | contig546end:10979-10998 | MsG0080048928.01.T01:CDS | 25.0% |
| !!! | GTATTTTTTATGTTTCTGAG+AGG | + | contig546end:10977-10996 | MsG0080048928.01.T01:CDS | 25.0% |
| !!! | TAAACTTTTTGAGCTCTATA+AGG | + | contig546end:10294-10313 | MsG0080048928.01.T01:CDS | 25.0% |
| !!! | TTCTTTAGAATTCGATAAGA+GGG | + | contig546end:10825-10844 | MsG0080048928.01.T01:CDS | 25.0% |
| ACAGGAAATTTCAAAGGAAA+TGG | - | contig546end:10703-10722 | None:intergenic | 30.0% | |
| AGATAAAAATGTTTCAGGAG+AGG | + | contig546end:10758-10777 | MsG0080048928.01.T01:CDS | 30.0% | |
| ATAGAGCTCAAAAAGTTTAG+GGG | - | contig546end:10293-10312 | None:intergenic | 30.0% | |
| TGTTTCTTGGAATTCTGAAT+GGG | + | contig546end:10594-10613 | MsG0080048928.01.T01:CDS | 30.0% | |
| TTTATAACTTATTGAGGAGG+AGG | + | contig546end:11309-11328 | MsG0080048928.01.T01:three_prime_UTR | 30.0% | |
| TTTGATGGAAGAACACAAAA+GGG | + | contig546end:10363-10382 | MsG0080048928.01.T01:CDS | 30.0% | |
| ! | AAAAGGGTGCATAGTTATTA+TGG | + | contig546end:10730-10749 | MsG0080048928.01.T01:CDS | 30.0% |
| ! | TTATCGAATTCTAAAGAACC+AGG | - | contig546end:10823-10842 | None:intergenic | 30.0% |
| ! | TTGTTTCTTGGAATTCTGAA+TGG | + | contig546end:10593-10612 | MsG0080048928.01.T01:CDS | 30.0% |
| ! | TTTTGATGGAAGAACACAAA+AGG | + | contig546end:10362-10381 | MsG0080048928.01.T01:CDS | 30.0% |
| !! | CAATGAGTTCTAAAATCCAT+TGG | - | contig546end:10505-10524 | None:intergenic | 30.0% |
| !! | GTTCTTTAGAATTCGATAAG+AGG | + | contig546end:10824-10843 | MsG0080048928.01.T01:CDS | 30.0% |
| !!! | AATCTCCTTTGTTTTTATGG+AGG | + | contig546end:11058-11077 | MsG0080048928.01.T01:CDS | 30.0% |
| !!! | ATCTCCTTTGTTTTTATGGA+GGG | + | contig546end:11059-11078 | MsG0080048928.01.T01:CDS | 30.0% |
| !!! | CAATGGATTTTAGAACTCAT+TGG | + | contig546end:10503-10522 | MsG0080048928.01.T01:CDS | 30.0% |
| !!! | TGCACCCTTTTAAAATTTAC+AGG | - | contig546end:10721-10740 | None:intergenic | 30.0% |
| !!! | TTAGTTTTACAGTTGAGAAG+AGG | + | contig546end:10872-10891 | MsG0080048928.01.T01:CDS | 30.0% |
| !!! | TTTTTTATGTTTCTGAGAGG+GGG | + | contig546end:10980-10999 | MsG0080048928.01.T01:CDS | 30.0% |
| AACAGAAGCTTATGATGGTT+CGG | + | contig546end:11023-11042 | MsG0080048928.01.T01:CDS | 35.0% | |
| AAGAATAAGACGATTGTGGA+AGG | + | contig546end:10637-10656 | MsG0080048928.01.T01:CDS | 35.0% | |
| AAGATCGAAGCAAGAAGAAA+AGG | + | contig546end:10092-10111 | MsG0080048928.01.T01:CDS | 35.0% | |
| AAGCTGCTGAATATGTTACT+AGG | + | contig546end:10407-10426 | MsG0080048928.01.T01:CDS | 35.0% | |
| AGAAAATCAGAGATTCTGTG+AGG | - | contig546end:10262-10281 | None:intergenic | 35.0% | |
| AGAATAAGACGATTGTGGAA+GGG | + | contig546end:10638-10657 | MsG0080048928.01.T01:CDS | 35.0% | |
| AGATCGAAGCAAGAAGAAAA+GGG | + | contig546end:10093-10112 | MsG0080048928.01.T01:CDS | 35.0% | |
| GAAGAAGAATAAGACGATTG+TGG | + | contig546end:10633-10652 | MsG0080048928.01.T01:CDS | 35.0% | |
| TAATGTGAAAGAGATCGAAC+TGG | - | contig546end:10214-10233 | None:intergenic | 35.0% | |
| TACTAGGTTGCTTATGATGT+CGG | + | contig546end:10423-10442 | MsG0080048928.01.T01:CDS | 35.0% | |
| TTCTCCCTCCATAAAAACAA+AGG | - | contig546end:11066-11085 | None:intergenic | 35.0% | |
| ! | AGGCTTTTGCTTAAACATTG+TGG | + | contig546end:10955-10974 | MsG0080048928.01.T01:CDS | 35.0% |
| ! | TCTTGACGATGTTGAGTTTT+TGG | + | contig546end:10567-10586 | MsG0080048928.01.T01:CDS | 35.0% |
| ! | TTTTACAGTTGAGAAGAGGT+TGG | + | contig546end:10876-10895 | MsG0080048928.01.T01:CDS | 35.0% |
| !! | ATTCTGAGATGGATGTTAGA+GGG | + | contig546end:11265-11284 | MsG0080048928.01.T01:CDS | 35.0% |
| !! | GCAAAAAGCTGAAGTTTTGA+TGG | + | contig546end:10348-10367 | MsG0080048928.01.T01:CDS | 35.0% |
| !!! | AAGAGATTTTGGTTTGCCAA+TGG | + | contig546end:10486-10505 | MsG0080048928.01.T01:CDS | 35.0% |
| !!! | AGTTTTTGGAGCTTGTTTCT+TGG | + | contig546end:10581-10600 | MsG0080048928.01.T01:CDS | 35.0% |
| AAAAGCCTCATCAACTTCTG+AGG | - | contig546end:10943-10962 | None:intergenic | 40.0% | |
| AAACCCTTTGCATCAGCATA+AGG | - | contig546end:10796-10815 | None:intergenic | 40.0% | |
| AACTCAACATCGTCAAGAGA+AGG | - | contig546end:10565-10584 | None:intergenic | 40.0% | |
| AAGGAAGAAGAAGTTTGAGG+CGG | + | contig546end:11113-11132 | MsG0080048928.01.T01:CDS | 40.0% | |
| AGCTCTATAAGGATCGTAAC+GGG | + | contig546end:10305-10324 | MsG0080048928.01.T01:CDS | 40.0% | |
| AGGAAGGAAGAAGAAGTTTG+AGG | + | contig546end:11110-11129 | MsG0080048928.01.T01:CDS | 40.0% | |
| CGAACTGGAATAACCATTTC+TGG | - | contig546end:10199-10218 | None:intergenic | 40.0% | |
| CTTCTTCTCAATCTCTGTGA+TGG | - | contig546end:10620-10639 | None:intergenic | 40.0% | |
| GAATAAGACGATTGTGGAAG+GGG | + | contig546end:10639-10658 | MsG0080048928.01.T01:CDS | 40.0% | |
| GAGCTCTATAAGGATCGTAA+CGG | + | contig546end:10304-10323 | MsG0080048928.01.T01:CDS | 40.0% | |
| TAAAGGATCCTTGTACTCCA+AGG | - | contig546end:11235-11254 | None:intergenic | 40.0% | |
| TCTCCTTATGCTGATGCAAA+GGG | + | contig546end:10790-10809 | MsG0080048928.01.T01:CDS | 40.0% | |
| TCTCGAACAAGAACCAGAAA+TGG | + | contig546end:10183-10202 | MsG0080048928.01.T01:CDS | 40.0% | |
| TTCACCACACGAAAAAGTTG+AGG | - | contig546end:10541-10560 | None:intergenic | 40.0% | |
| ! | GATAGTGATAGTGATGAGGA+AGG | + | contig546end:11135-11154 | MsG0080048928.01.T01:CDS | 40.0% |
| ! | GCGCATTTTCGAAGAGATTT+TGG | + | contig546end:10475-10494 | MsG0080048928.01.T01:CDS | 40.0% |
| ! | TCAGAGATTCTGTGAGGTTT+TGG | - | contig546end:10256-10275 | None:intergenic | 40.0% |
| !! | CTTAGTCTTGTTGGCTATAG+AGG | + | contig546end:11090-11109 | MsG0080048928.01.T01:CDS | 40.0% |
| !! | GAGAAGCTTCTTAGTCTTGT+TGG | + | contig546end:11081-11100 | MsG0080048928.01.T01:CDS | 40.0% |
| !! | GATTCTGAGATGGATGTTAG+AGG | + | contig546end:11264-11283 | MsG0080048928.01.T01:CDS | 40.0% |
| !! | GGTTGATAAACGTGTTCAGT+TGG | + | contig546end:10444-10463 | MsG0080048928.01.T01:CDS | 40.0% |
| !! | TTATGCCTCAGAAGTTGATG+AGG | + | contig546end:10935-10954 | MsG0080048928.01.T01:CDS | 40.0% |
| !!! | AGATTCTGTGAGGTTTTGGA+AGG | - | contig546end:10252-10271 | None:intergenic | 40.0% |
| !!! | GTATCCTCAACTTTTTCGTG+TGG | + | contig546end:10534-10553 | MsG0080048928.01.T01:CDS | 40.0% |
| ACAGGATACCTTGGAGTACA+AGG | + | contig546end:11224-11243 | MsG0080048928.01.T01:CDS | 45.0% | |
| ATCACCTAACTCACTTCCGT+TGG | + | contig546end:10905-10924 | MsG0080048928.01.T01:CDS | 45.0% | |
| GAGGCATAACTAACTCCCAA+CGG | - | contig546end:10924-10943 | None:intergenic | 45.0% | |
| GCTCTATAAGGATCGTAACG+GGG | + | contig546end:10306-10325 | MsG0080048928.01.T01:CDS | 45.0% | |
| GCTTCAGAGTGATTCTGATG+TGG | + | contig546end:11176-11195 | MsG0080048928.01.T01:CDS | 45.0% | |
| GTACAAGGATCCTTTACTCG+AGG | + | contig546end:11239-11258 | MsG0080048928.01.T01:CDS | 45.0% | |
| GTCTCCTTATGCTGATGCAA+AGG | + | contig546end:10789-10808 | MsG0080048928.01.T01:CDS | 45.0% | |
| TCACCTAACTCACTTCCGTT+GGG | + | contig546end:10906-10925 | MsG0080048928.01.T01:CDS | 45.0% | |
| TCAGAATCGTCCTCGAGTAA+AGG | - | contig546end:11252-11271 | None:intergenic | 45.0% | |
| TCAGAGTGATTCTGATGTGG+AGG | + | contig546end:11179-11198 | MsG0080048928.01.T01:CDS | 45.0% | |
| TCGAAGCAGCAACAGAGAAA+TGG | + | contig546end:10125-10144 | MsG0080048928.01.T01:CDS | 45.0% | |
| TGATTCTGATGTGGAGGACT+TGG | + | contig546end:11185-11204 | MsG0080048928.01.T01:CDS | 45.0% | |
| ! | AATGGTAGCGAAAGCAAACC+CGG | - | contig546end:10685-10704 | None:intergenic | 45.0% |
| ! | AGTGATAGTGATGAGGAAGG+CGG | + | contig546end:11138-11157 | MsG0080048928.01.T01:CDS | 45.0% |
| ! | GATGCAAAGGGTTTGAAACC+TGG | + | contig546end:10802-10821 | MsG0080048928.01.T01:CDS | 45.0% |
| ! | GTCTTGTTGGCTATAGAGGA+AGG | + | contig546end:11094-11113 | MsG0080048928.01.T01:CDS | 45.0% |
| AACTGAAACCGAACACACCC+CGG | + | contig546end:10663-10682 | MsG0080048928.01.T01:CDS | 50.0% | |
| ACTCCCAACGGAAGTGAGTT+AGG | - | contig546end:10912-10931 | None:intergenic | 50.0% | |
| GCTTGAGCAACAGGATACCT+TGG | + | contig546end:11215-11234 | MsG0080048928.01.T01:CDS | 50.0% | |
| TGATGTGGAGGACTTGGATG+TGG | + | contig546end:11191-11210 | MsG0080048928.01.T01:CDS | 50.0% | |
| ! | ACTCGAGGACGATTCTGAGA+TGG | + | contig546end:11254-11273 | MsG0080048928.01.T01:CDS | 50.0% |
| ! | AGGATCGTAACGGGGTGTTA+TGG | + | contig546end:10314-10333 | MsG0080048928.01.T01:CDS | 50.0% |
| ! | ATGGTAGCGAAAGCAAACCC+GGG | - | contig546end:10684-10703 | None:intergenic | 50.0% |
| ! | ATGTTTCTGAGAGGGGGAAG+AGG | + | contig546end:10986-11005 | MsG0080048928.01.T01:CDS | 50.0% |
| ! | GGCGGATAGTGATAGTGATG+AGG | + | contig546end:11131-11150 | MsG0080048928.01.T01:CDS | 50.0% |
| AAGCAAACCCGGGGTGTGTT+CGG | - | contig546end:10674-10693 | None:intergenic | 55.0% | |
| ACTGAAACCGAACACACCCC+GGG | + | contig546end:10664-10683 | MsG0080048928.01.T01:CDS | 55.0% | |
| AGTGATGAGGAAGGCGGTGA+TGG | + | contig546end:11144-11163 | MsG0080048928.01.T01:CDS | 55.0% | |
| GGATGTGGAGCTTGAGCAAC+AGG | + | contig546end:11206-11225 | MsG0080048928.01.T01:CDS | 55.0% | |
| ! | CGTAACGGGGTGTTATGGTG+TGG | + | contig546end:10319-10338 | MsG0080048928.01.T01:CDS | 55.0% |
| ! | TGGTAGCGAAAGCAAACCCG+GGG | - | contig546end:10683-10702 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig546end | gene | 10070 | 11472 | 10070 | ID=MsG0080048928.01;Name=MsG0080048928.01 |
| contig546end | mRNA | 10070 | 11472 | 10070 | ID=MsG0080048928.01.T01;Parent=MsG0080048928.01;Name=MsG0080048928.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|176|408 |
| contig546end | exon | 10070 | 11472 | 10070 | ID=MsG0080048928.01.T01:exon:1594;Parent=MsG0080048928.01.T01 |
| contig546end | CDS | 10070 | 11296 | 10070 | ID=MsG0080048928.01.T01:cds;Parent=MsG0080048928.01.T01 |
| contig546end | three_prime_UTR | 11297 | 11472 | 11297 | ID=MsG0080048928.01.T01:three_prime_utr;Parent=MsG0080048928.01.T01 |
| Gene Sequence |
| Protein sequence |
