AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038997.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038997.01.T01 MTR_7g066340 68.277 476 93 3 1 418 1 476 0.0 616
MsG0780038997.01.T01 MTR_7g066310 66.059 439 84 2 9 418 4 406 0.0 553
MsG0780038997.01.T01 MTR_7g066350 57.709 454 122 8 1 392 1 446 9.20e-161 461
MsG0780038997.01.T01 MTR_7g066260 53.086 486 153 7 6 418 9 492 1.16e-157 454
MsG0780038997.01.T01 MTR_7g066280 58.391 435 52 4 91 418 1 413 2.96e-154 442
MsG0780038997.01.T01 MTR_1g041315 54.709 446 126 8 7 379 9 451 3.09e-154 445
MsG0780038997.01.T01 MTR_7g066400 52.967 455 130 8 1 392 1 434 3.78e-150 433
MsG0780038997.01.T01 MTR_7g066360 50.928 485 151 10 6 417 8 478 7.43e-137 400
MsG0780038997.01.T01 MTR_7g066570 48.560 486 147 7 3 395 5 480 2.17e-133 395
MsG0780038997.01.T01 MTR_7g012680 49.327 446 172 7 3 397 5 447 5.61e-128 377
MsG0780038997.01.T01 MTR_7g066290 50.328 457 130 9 6 396 9 434 1.19e-126 373
MsG0780038997.01.T01 MTR_7g066290 30.055 183 108 5 1 174 256 427 6.74e-11 64.3
MsG0780038997.01.T01 MTR_7g066580 48.124 453 148 12 18 395 1 441 3.79e-121 359
MsG0780038997.01.T01 MTR_7g058710 44.939 494 156 12 1 395 1 477 4.76e-118 353
MsG0780038997.01.T01 MTR_2g029400 48.463 423 148 12 6 384 8 404 4.18e-113 337
MsG0780038997.01.T01 MTR_2g029400 29.082 196 110 6 201 389 10 183 5.05e-11 64.3
MsG0780038997.01.T01 MTR_7g066430 37.113 485 201 11 12 395 4 485 4.57e-93 289
MsG0780038997.01.T01 MTR_7g066410 35.119 504 204 10 13 395 11 512 3.36e-89 280
MsG0780038997.01.T01 MTR_7g066410 38.053 113 62 3 12 123 284 389 4.97e-11 64.7
MsG0780038997.01.T01 MTR_7g066490 38.283 431 194 8 12 402 16 414 3.68e-86 269
MsG0780038997.01.T01 MTR_1g014060 43.223 391 191 10 21 395 9 384 1.34e-84 264
MsG0780038997.01.T01 MTR_7g058700 42.155 427 156 11 24 395 531 921 1.86e-83 274
MsG0780038997.01.T01 MTR_7g066480 36.569 443 191 7 11 397 15 423 6.40e-82 258
MsG0780038997.01.T01 MTR_7g062300 34.647 482 211 14 1 391 1 469 7.46e-73 236
MsG0780038997.01.T01 MTR_7g063660 32.766 470 225 7 11 395 8 471 1.45e-72 235
MsG0780038997.01.T01 MTR_7g063920 36.136 440 219 8 5 395 4 430 1.88e-72 234
MsG0780038997.01.T01 MTR_7g066680 46.823 299 96 5 157 392 37 335 1.84e-71 228
MsG0780038997.01.T01 MTR_7g063880 33.680 481 221 13 5 402 4 469 2.30e-69 227
MsG0780038997.01.T01 MTR_7g063830 34.141 454 218 10 5 395 3 438 1.80e-68 224
MsG0780038997.01.T01 MTR_7g063840 32.558 473 227 10 1 391 1 463 1.98e-67 222
MsG0780038997.01.T01 MTR_7g063900 34.280 493 215 12 1 395 1 482 3.32e-65 216
MsG0780038997.01.T01 MTR_4g019310 32.742 507 218 17 6 401 2 496 9.82e-63 210
MsG0780038997.01.T01 MTR_4g017830 30.443 519 241 12 1 406 1 512 4.95e-61 206
MsG0780038997.01.T01 MTR_4g017440 31.124 498 232 11 6 395 8 502 3.86e-60 204
MsG0780038997.01.T01 MTR_7g063890 33.888 481 214 12 11 395 26 498 1.10e-58 199
MsG0780038997.01.T01 MTR_3g007740 32.735 446 228 12 11 395 8 442 5.31e-56 191
MsG0780038997.01.T01 MTR_7g063670 32.684 462 214 12 8 395 13 451 6.02e-56 191
MsG0780038997.01.T01 MTR_3g065200 31.441 458 179 10 10 382 1 408 1.71e-54 187
MsG0780038997.01.T01 MTR_4g017610 29.897 485 235 13 2 392 3 476 7.70e-54 186
MsG0780038997.01.T01 MTR_7g066390 55.682 176 46 2 246 417 1 148 1.94e-53 175
MsG0780038997.01.T01 MTR_4g017470 29.106 481 255 10 1 401 1 475 7.71e-52 181
MsG0780038997.01.T01 MTR_4g017470 26.957 230 131 7 198 407 5 217 2.10e-15 78.2
MsG0780038997.01.T01 MTR_7g063820 35.587 281 142 5 149 395 203 478 2.17e-42 155
MsG0780038997.01.T01 MTR_7g063820 50.420 119 56 2 1 119 1 116 9.97e-26 109
MsG0780038997.01.T01 MTR_7g063720 39.252 214 117 4 195 395 13 226 2.21e-40 144
MsG0780038997.01.T01 MTR_7g063720 33.846 130 73 5 2 128 16 135 1.63e-12 67.4
MsG0780038997.01.T01 MTR_7g062280 33.333 297 140 7 135 391 203 481 2.53e-40 150
MsG0780038997.01.T01 MTR_7g062280 48.031 127 64 1 1 127 1 125 4.86e-27 113
MsG0780038997.01.T01 MTR_7g062280 37.736 106 60 2 15 119 269 369 1.79e-12 69.3
MsG0780038997.01.T01 MTR_4g019340 34.066 273 146 5 137 383 237 501 5.15e-37 141
MsG0780038997.01.T01 MTR_4g019340 37.302 126 67 2 10 123 35 160 4.83e-18 86.7
MsG0780038997.01.T01 MTR_7g100420 31.477 413 194 11 15 395 42 397 2.35e-34 132
MsG0780038997.01.T01 MTR_4g017550 27.122 483 223 18 26 393 3 471 2.55e-34 133
MsG0780038997.01.T01 MTR_4g017410 31.525 295 160 10 152 417 219 500 9.69e-26 109
MsG0780038997.01.T01 MTR_4g017410 38.889 144 76 5 6 137 3 146 3.62e-22 99.0
MsG0780038997.01.T01 MTR_7g062270 45.536 112 60 1 13 124 11 121 5.06e-24 103
MsG0780038997.01.T01 MTR_7g063850 31.507 219 114 5 208 395 69 282 3.66e-23 99.0
MsG0780038997.01.T01 MTR_8g023240 21.757 478 276 12 1 396 29 490 4.69e-20 92.8
MsG0780038997.01.T01 MTR_4g019330 34.286 175 85 4 219 391 32 178 9.85e-19 84.0
MsG0780038997.01.T01 MTR_8g445860 28.182 220 115 5 208 388 16 231 1.17e-18 85.1
MsG0780038997.01.T01 MTR_8g445860 26.728 217 125 7 4 200 5 207 1.65e-13 70.1
MsG0780038997.01.T01 MTR_2g067310 51.852 81 34 1 23 103 58 133 3.92e-17 80.9
MsG0780038997.01.T01 MTR_0150s0010 27.111 225 124 4 203 388 8 231 1.27e-16 79.3
MsG0780038997.01.T01 MTR_0150s0010 36.458 96 54 2 1 96 1 89 7.23e-11 62.4
MsG0780038997.01.T01 MTR_7g063760 50.000 66 32 1 331 395 2 67 1.05e-13 66.2
MsG0780038997.01.T01 MTR_4g019240 35.246 122 65 5 3 114 4 121 2.98e-13 68.2
MsG0780038997.01.T01 MTR_1g115455 32.824 131 74 4 6 130 3 125 1.07e-12 67.8
MsG0780038997.01.T01 MTR_1g115440 30.357 224 116 10 1 200 1 208 1.45e-12 67.4
MsG0780038997.01.T01 MTR_1g115450 37.778 90 51 1 7 96 2 86 2.57e-12 64.3
MsG0780038997.01.T01 MTR_1g115470 38.462 91 51 1 12 102 6 91 3.23e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038997.01.T01 AT5G43240 25.838 507 265 14 15 417 12 511 4.29e-41 152
MsG0780038997.01.T01 AT5G43240 25.838 507 265 14 15 417 12 511 4.29e-41 152
MsG0780038997.01.T01 AT5G43240 25.838 507 265 14 15 417 12 511 4.29e-41 152
MsG0780038997.01.T01 AT3G09110 29.560 318 161 9 12 270 9 322 3.55e-36 135
MsG0780038997.01.T01 AT5G01140 25.203 492 254 13 12 417 9 472 5.58e-34 132
MsG0780038997.01.T01 AT3G09120 28.254 315 154 9 11 259 5 313 3.02e-27 110
MsG0780038997.01.T01 AT3G09140 30.450 289 167 8 137 395 209 493 4.85e-25 107
MsG0780038997.01.T01 AT3G09140 39.231 130 73 3 1 128 1 126 2.10e-20 93.6
MsG0780038997.01.T01 AT3G09140 30.216 278 162 7 148 395 246 521 2.79e-24 105
MsG0780038997.01.T01 AT3G09140 39.231 130 73 3 1 128 1 126 2.27e-20 93.6
MsG0780038997.01.T01 AT5G43240 27.500 320 184 11 137 417 57 367 5.77e-24 102
MsG0780038997.01.T01 AT5G01120 27.445 317 181 9 140 417 201 507 3.77e-23 102
MsG0780038997.01.T01 AT5G01120 40.952 105 62 0 15 119 12 116 5.45e-19 89.4
MsG0780038997.01.T01 AT5G01130 26.087 276 182 4 137 401 186 450 8.81e-22 97.4
MsG0780038997.01.T01 AT5G01130 38.596 114 67 2 1 114 1 111 4.00e-15 77.4
MsG0780038997.01.T01 AT5G01150 40.741 108 64 0 12 119 9 116 8.87e-20 91.7
MsG0780038997.01.T01 AT5G01150 26.582 316 191 8 118 396 169 480 2.16e-19 90.5
MsG0780038997.01.T01 AT5G37320 25.949 316 195 11 105 395 178 479 5.12e-16 80.1
MsG0780038997.01.T01 AT5G37320 36.207 116 66 4 12 122 7 119 4.90e-13 71.2

Find 77 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGCTTATGTTGATATTA+AGG 0.164334 7:+56582127 None:intergenic
TTTCTACCTTTGGCTTCTTT+AGG 0.164499 7:+56577425 None:intergenic
TAGAGCACCATTAACGTTTA+TGG 0.174129 7:-56578249 MsG0780038997.01.T01:CDS
CAATATTCAGTTTCATATTC+TGG 0.189480 7:+56582433 None:intergenic
GATCCTAAATCCCCTATTTC+TGG 0.194829 7:-56578281 MsG0780038997.01.T01:CDS
TTCTACCTTTGGCTTCTTTA+GGG 0.200899 7:+56577426 None:intergenic
CTAGCATATCCTCCAGAAAT+AGG 0.222209 7:+56578269 None:intergenic
CCCACCTCCGATATGTTTCT+TGG 0.228014 7:+56578662 None:intergenic
GTCAGACTTCATATTTAAAA+AGG 0.246204 7:-56578708 MsG0780038997.01.T01:CDS
TGAGCACCTGCTGAGTTTCT+TGG 0.260438 7:+56582459 None:intergenic
CCTCCAGAAATAGGGGATTT+AGG 0.261981 7:+56578278 None:intergenic
CAAAGTTATCATTAGAGTTT+TGG 0.270973 7:-56582709 MsG0780038997.01.T01:CDS
TAATCTTCTCAAATTGTCTT+TGG 0.289830 7:-56578747 MsG0780038997.01.T01:CDS
TCTGTCACCATAAACGTTAA+TGG 0.361232 7:+56578242 None:intergenic
TAGCATATCCTCCAGAAATA+GGG 0.363628 7:+56578270 None:intergenic
GAGGAAATGGTCGTTAATAT+TGG 0.365896 7:-56578140 MsG0780038997.01.T01:CDS
TAAATTATCAATGCAGCTTA+AGG 0.378298 7:+56578469 None:intergenic
TATTCCCTATTACCTCCTTC+TGG 0.379109 7:+56578117 None:intergenic
AAATGCTTGGATTAGTTAGT+AGG 0.380859 7:+56578387 None:intergenic
TTGTAGGTATCGGTAATATC+TGG 0.383676 7:+56578342 None:intergenic
TTTATATGGTTGCAGGGTCT+CGG 0.412461 7:-56578013 MsG0780038997.01.T01:intron
AATATTGAAGCACTGAGCTT+TGG 0.420564 7:-56582567 MsG0780038997.01.T01:CDS
GGCAGGAAGTGGACCTGATC+AGG 0.425569 7:-56577473 MsG0780038997.01.T01:intron
ACTTAATGACGTGGAGGAAA+TGG 0.429758 7:-56578153 MsG0780038997.01.T01:CDS
AAGATATGAAATACCATCAA+TGG 0.434003 7:+56578193 None:intergenic
GATGGCAAATTAACCTGATC+AGG 0.438614 7:+56577460 None:intergenic
CCACCTCCGATATGTTTCTT+GGG 0.453693 7:+56578663 None:intergenic
TGAGCTCAGAAAAGTGCTTA+AGG 0.457575 7:-56578427 MsG0780038997.01.T01:CDS
AAAGGAACAATGTGATGAAA+TGG 0.461572 7:-56578627 MsG0780038997.01.T01:CDS
CTACCTTTGGCTTCTTTAGG+GGG 0.462976 7:+56577428 None:intergenic
ATTTCCTCCACGTCATTAAG+TGG 0.469324 7:+56578155 None:intergenic
TATTGACGATACTGAAACCT+TGG 0.482310 7:-56582415 MsG0780038997.01.T01:CDS
TTAAATATGAAGTCTGACAT+AGG 0.484007 7:+56578713 None:intergenic
TTCATATCTTGAAAGAATGA+AGG 0.484244 7:-56578180 MsG0780038997.01.T01:CDS
TCAAACTGCATGGAAATGCT+TGG 0.492207 7:+56578374 None:intergenic
GGTGGGGATCGGTGAAGAAA+AGG 0.492250 7:-56578645 MsG0780038997.01.T01:CDS
TATCAACATAAGCAAGAAAG+AGG 0.508368 7:-56582121 MsG0780038997.01.T01:intron
TTTGTCTACTTGTTCTGCTG+AGG 0.512309 7:+56582728 None:intergenic
GATCTTGTTTATTGAAGCAG+AGG 0.517035 7:-56578570 MsG0780038997.01.T01:CDS
CCCAAGAAACATATCGGAGG+TGG 0.517641 7:-56578663 MsG0780038997.01.T01:CDS
TTTCTCACCTTTCCCTTGGG+AGG 0.518315 7:-56578521 MsG0780038997.01.T01:CDS
TTTAGACCCAAGAAACATAT+CGG 0.527517 7:-56578669 MsG0780038997.01.T01:CDS
TCTACCTTTGGCTTCTTTAG+GGG 0.532812 7:+56577427 None:intergenic
TCTATTTGCTGAGGCAGAGA+AGG 0.537242 7:-56582664 MsG0780038997.01.T01:CDS
ACTCCAATGTCATCCATTGA+TGG 0.546893 7:-56578206 MsG0780038997.01.T01:CDS
AACATATCGGAGGTGGGGAT+CGG 0.549762 7:-56578656 MsG0780038997.01.T01:CDS
TATGTACTGGTTGAGGCCGT+TGG 0.555448 7:+56577952 None:intergenic
TTAAATCTCCTCCAGAAGCA+TGG 0.561651 7:-56582183 MsG0780038997.01.T01:intron
TAACACTCCTCCCAAGGGAA+AGG 0.572666 7:+56578514 None:intergenic
AGCATATCCTCCAGAAATAG+GGG 0.573043 7:+56578271 None:intergenic
TCAACATCTGCTTTGACCAA+CGG 0.573453 7:-56577968 MsG0780038997.01.T01:CDS
CTCGTCATCACAGAGGTAGA+AGG 0.576970 7:+56582389 None:intergenic
ATCAAGCCAAGAAACTCAGC+AGG 0.578098 7:-56582465 MsG0780038997.01.T01:CDS
GTTTATGGTGACAGATGAGT+TGG 0.578154 7:-56578234 MsG0780038997.01.T01:CDS
CATATGTAACACTCCTCCCA+AGG 0.585037 7:+56578508 None:intergenic
CCAAGAAACATATCGGAGGT+GGG 0.589222 7:-56578662 MsG0780038997.01.T01:CDS
GTTCGTGAGTTCAAACTGCA+TGG 0.593454 7:+56578364 None:intergenic
ACTAACCTATGTACTGGTTG+AGG 0.600521 7:+56577945 None:intergenic
AAATAAAGTTCTATTTGCTG+AGG 0.602370 7:-56582673 MsG0780038997.01.T01:CDS
AGGGACCATTGCAAAACTTG+TGG 0.604088 7:-56582601 MsG0780038997.01.T01:CDS
CGTTAATATTGGCCAGAAGG+AGG 0.604404 7:-56578129 MsG0780038997.01.T01:intron
ATACCATCAATGGATGACAT+TGG 0.606080 7:+56578203 None:intergenic
GGTCGTTAATATTGGCCAGA+AGG 0.607810 7:-56578132 MsG0780038997.01.T01:CDS
TAGTGAACTAACCTATGTAC+TGG 0.608380 7:+56577939 None:intergenic
CAAGAAACATATCGGAGGTG+GGG 0.611642 7:-56578661 MsG0780038997.01.T01:CDS
TTTCCTCCACGTCATTAAGT+GGG 0.626773 7:+56578156 None:intergenic
CCTAAATCCCCTATTTCTGG+AGG 0.628731 7:-56578278 MsG0780038997.01.T01:CDS
AACGGCCTCAACCAGTACAT+AGG 0.634113 7:-56577950 MsG0780038997.01.T01:intron
ACAGAGGTAGAAGGACTCCA+AGG 0.653082 7:+56582398 None:intergenic
ATATGTAACACTCCTCCCAA+GGG 0.664294 7:+56578509 None:intergenic
GTTGGTCAAAGCAGATGTTG+AGG 0.676855 7:+56577970 None:intergenic
GAAGGTCCCACTTAATGACG+TGG 0.677276 7:-56578162 MsG0780038997.01.T01:CDS
GGAGTGTTACATATGCTCGA+AGG 0.683354 7:-56578500 MsG0780038997.01.T01:CDS
GGTCCCACTTAATGACGTGG+AGG 0.698921 7:-56578159 MsG0780038997.01.T01:CDS
TCTTTGGTCACAGACATGCA+AGG 0.711493 7:-56582496 MsG0780038997.01.T01:CDS
AGACCCAAGAAACATATCGG+AGG 0.718632 7:-56578666 MsG0780038997.01.T01:CDS
TGCAAGTCTCGTCATCACAG+AGG 0.722120 7:+56582382 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+GGG + Chr7:56580746-56580765 None:intergenic 0.0%
!! TAATAATAATAATAATAATA+AGG + Chr7:56580747-56580766 None:intergenic 0.0%
!! TATTATTATTATTATTATTA+GGG - Chr7:56580747-56580766 MsG0780038997.01.T01:intron 0.0%
!! TTATTATTATTATTATTATT+AGG - Chr7:56580746-56580765 MsG0780038997.01.T01:intron 0.0%
!! AAAGAAAAAAACAATTATTT+AGG + Chr7:56578220-56578239 None:intergenic 10.0%
!! ATAAATTAACATATATGTAA+CGG - Chr7:56580117-56580136 MsG0780038997.01.T01:intron 10.0%
!! CATAGATTATTATTATTATT+AGG - Chr7:56580226-56580245 MsG0780038997.01.T01:intron 10.0%
!! TAAAAGAATTAGTTATAAAT+TGG - Chr7:56582412-56582431 MsG0780038997.01.T01:CDS 10.0%
!!! ACAAAAATTAACTTTAAAAT+AGG - Chr7:56580611-56580630 MsG0780038997.01.T01:intron 10.0%
!!! CAAAAATTAACTTTAAAATA+GGG - Chr7:56580612-56580631 MsG0780038997.01.T01:intron 10.0%
!!! TAATGATTGAAAATTTTATA+GGG + Chr7:56580328-56580347 None:intergenic 10.0%
!! AAATGCTATTAAAATTAAGT+AGG + Chr7:56580849-56580868 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + Chr7:56580848-56580867 None:intergenic 15.0%
!! ACAATATTTGATTGTTTATA+TGG - Chr7:56582134-56582153 MsG0780038997.01.T01:CDS 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + Chr7:56581040-56581059 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - Chr7:56581170-56581189 MsG0780038997.01.T01:intron 15.0%
!!! AAATGCTATTTAAATTAAGT+AGG - Chr7:56581260-56581279 MsG0780038997.01.T01:intron 15.0%
!!! AAATTTTCAATCATTACTTT+TGG - Chr7:56580332-56580351 MsG0780038997.01.T01:intron 15.0%
!!! AATGCTATTTAAATTAAGTA+GGG - Chr7:56581261-56581280 MsG0780038997.01.T01:intron 15.0%
!!! AATTTTGCAATAATTTTTTG+CGG + Chr7:56581005-56581024 None:intergenic 15.0%
!!! ATATGAGTTTACTTTAAAAT+AGG + Chr7:56580360-56580379 None:intergenic 15.0%
!!! GTAATGATTGAAAATTTTAT+AGG + Chr7:56580329-56580348 None:intergenic 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - Chr7:56580643-56580662 MsG0780038997.01.T01:intron 15.0%
!!! TATGAGTTTACTTTAAAATA+GGG + Chr7:56580359-56580378 None:intergenic 15.0%
!!! TCTTTTGATCTTTTAATATA+TGG + Chr7:56579061-56579080 None:intergenic 15.0%
!!! TTTGTTATCTTTTAAATGTT+TGG + Chr7:56578810-56578829 None:intergenic 15.0%
!!! TTTTAATTACTCAATTTGAA+TGG + Chr7:56582503-56582522 None:intergenic 15.0%
!! AAAACAATTATTTAGGAAAC+CGG + Chr7:56578213-56578232 None:intergenic 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + Chr7:56580910-56580929 None:intergenic 20.0%
!! AAGAATTAGTTATAAATTGG+AGG - Chr7:56582415-56582434 MsG0780038997.01.T01:CDS 20.0%
!! AGAAATGATTGTGATAATAT+TGG + Chr7:56578725-56578744 None:intergenic 20.0%
!! AGGTAAAACTTCTATTTAAA+TGG - Chr7:56579329-56579348 MsG0780038997.01.T01:intron 20.0%
!! ATCTTGATGAAAAATATCTT+TGG - Chr7:56577649-56577668 MsG0780038997.01.T01:intron 20.0%
!! ATGACATATTTGCATAATAT+TGG - Chr7:56579818-56579837 MsG0780038997.01.T01:intron 20.0%
!! ATGTAAAAATCTTACATCAA+CGG + Chr7:56578453-56578472 None:intergenic 20.0%
!! GGTAAAACTTCTATTTAAAT+GGG - Chr7:56579330-56579349 MsG0780038997.01.T01:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + Chr7:56580911-56580930 None:intergenic 20.0%
!! TAATAATAATCTATGAAGCA+CGG + Chr7:56580221-56580240 None:intergenic 20.0%
!! TAGAAAAAGAAGAGAATTAA+AGG - Chr7:56582530-56582549 MsG0780038997.01.T01:CDS 20.0%
!!! AAATATGTCATTTATGCTTT+TGG + Chr7:56579809-56579828 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + Chr7:56580639-56580658 None:intergenic 20.0%
!!! AAGTTGAAAGAAAATTTTAG+AGG - Chr7:56580671-56580690 MsG0780038997.01.T01:intron 20.0%
!!! AATATGTCATTTATGCTTTT+GGG + Chr7:56579808-56579827 None:intergenic 20.0%
!!! AGTTGAAAGAAAATTTTAGA+GGG - Chr7:56580672-56580691 MsG0780038997.01.T01:intron 20.0%
!!! AGTTTTTAAAGTTTAAACTC+TGG + Chr7:56582442-56582461 None:intergenic 20.0%
!!! ATAAGGGTTAAATATGTTTT+TGG + Chr7:56580730-56580749 None:intergenic 20.0%
!!! ATGAAAAGTTGGTAATTATA+AGG + Chr7:56580270-56580289 None:intergenic 20.0%
!!! ATGTATCATGAAGTTTTTTT+TGG + Chr7:56582253-56582272 None:intergenic 20.0%
!!! ATTTGTTTTAGATATTTGTC+TGG + Chr7:56578309-56578328 None:intergenic 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - Chr7:56580642-56580661 MsG0780038997.01.T01:intron 20.0%
!!! TATATTTCATGTGTTAGTTT+AGG + Chr7:56579885-56579904 None:intergenic 20.0%
!!! TTATGATTTTTTGTAGGTAT+CGG + Chr7:56581832-56581851 None:intergenic 20.0%
!!! TTCTCGTTTTATTTTTATTG+TGG + Chr7:56578612-56578631 None:intergenic 20.0%
!!! TTTGTTTTAGATATTTGTCT+GGG + Chr7:56578308-56578327 None:intergenic 20.0%
!!! TTTTCCTTATGATTTTTTGT+AGG + Chr7:56581838-56581857 None:intergenic 20.0%
! AAAAATTAACAAACGTGTCA+AGG - Chr7:56578911-56578930 MsG0780038997.01.T01:intron 25.0%
! AAAATTAACAAACGTGTCAA+GGG - Chr7:56578912-56578931 MsG0780038997.01.T01:intron 25.0%
! AACCGTAGATGAATTAATAA+AGG - Chr7:56579924-56579943 MsG0780038997.01.T01:intron 25.0%
! AAGATATGAAATACCATCAA+TGG + Chr7:56581971-56581990 None:intergenic 25.0%
! AATCAAGAACTTAATGCTTT+CGG + Chr7:56578878-56578897 None:intergenic 25.0%
! AGCAAACTTTACTAATTTAG+TGG + Chr7:56582472-56582491 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + Chr7:56580877-56580896 None:intergenic 25.0%
! ATATGTAACTCTTGTATCTA+TGG + Chr7:56578359-56578378 None:intergenic 25.0%
! CAATATTCAGTTTCATATTC+TGG + Chr7:56577731-56577750 None:intergenic 25.0%
! GACCTTTATTAATTCATCTA+CGG + Chr7:56579929-56579948 None:intergenic 25.0%
! GATACCTACAAAAAATCATA+AGG - Chr7:56581831-56581850 MsG0780038997.01.T01:intron 25.0%
! GTCAGACTTCATATTTAAAA+AGG - Chr7:56581453-56581472 MsG0780038997.01.T01:intron 25.0%
! TAAAAGATAACAAAGTCGAT+CGG - Chr7:56578816-56578835 MsG0780038997.01.T01:intron 25.0%
! TAAATTATCAATGCAGCTTA+AGG + Chr7:56581695-56581714 None:intergenic 25.0%
! TAGAAATAACGATATCACTT+TGG + Chr7:56578764-56578783 None:intergenic 25.0%
! TCTTGCTTATGTTGATATTA+AGG + Chr7:56578037-56578056 None:intergenic 25.0%
! TGATTATTATCTATGAAGCA+CGG - Chr7:56578103-56578122 MsG0780038997.01.T01:intron 25.0%
! TGTACATGCACATATAATAA+AGG + Chr7:56582667-56582686 None:intergenic 25.0%
! TTAAATATGAAGTCTGACAT+AGG + Chr7:56581451-56581470 None:intergenic 25.0%
! TTATTATATGTGCATGTACA+AGG - Chr7:56582667-56582686 MsG0780038997.01.T01:CDS 25.0%
! TTCACAATAGTTCACATTAA+GGG - Chr7:56578545-56578564 MsG0780038997.01.T01:CDS 25.0%
! TTCATATCTTGAAAGAATGA+AGG - Chr7:56581981-56582000 MsG0780038997.01.T01:intron 25.0%
! TTTACACGTGAGTATAATAT+AGG - Chr7:56578485-56578504 MsG0780038997.01.T01:CDS 25.0%
! TTTCACAATAGTTCACATTA+AGG - Chr7:56578544-56578563 MsG0780038997.01.T01:CDS 25.0%
!! AAATAAAGTTCTATTTGCTG+AGG - Chr7:56577488-56577507 MsG0780038997.01.T01:intron 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + Chr7:56580300-56580319 None:intergenic 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + Chr7:56580299-56580318 None:intergenic 25.0%
!! CAAAGTTATCATTAGAGTTT+TGG - Chr7:56577452-56577471 MsG0780038997.01.T01:CDS 25.0%
!! CTTAAATCTCTGATTTGAAT+AGG - Chr7:56581387-56581406 MsG0780038997.01.T01:intron 25.0%
!!! AAACTTGTTGTAACAACATT+TGG + Chr7:56577960-56577979 None:intergenic 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - Chr7:56581199-56581218 MsG0780038997.01.T01:intron 25.0%
!!! AATTTTTTTTCTCAAAGTCC+GGG + Chr7:56577883-56577902 None:intergenic 25.0%
!!! CAATTTTTTTTCTCAAAGTC+CGG + Chr7:56577884-56577903 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - Chr7:56581198-56581217 MsG0780038997.01.T01:intron 25.0%
!!! TCCTATGTTTTTTACATTAG+CGG - Chr7:56580148-56580167 MsG0780038997.01.T01:intron 25.0%
AAAGGAACAATGTGATGAAA+TGG - Chr7:56581534-56581553 MsG0780038997.01.T01:intron 30.0%
AACTTGAAGAATTTCGCTAT+TGG + Chr7:56579634-56579653 None:intergenic 30.0%
AATAGTTCACATTAAGGGTT+TGG - Chr7:56578550-56578569 MsG0780038997.01.T01:CDS 30.0%
AATGCTTTCGGACATTTAAT+CGG + Chr7:56578866-56578885 None:intergenic 30.0%
ACCGCTAATGTAAAAAACAT+AGG + Chr7:56580152-56580171 None:intergenic 30.0%
AGGAAAAATGAATGATCGAA+AGG - Chr7:56582550-56582569 MsG0780038997.01.T01:CDS 30.0%
ATAGTTCACATTAAGGGTTT+GGG - Chr7:56578551-56578570 MsG0780038997.01.T01:CDS 30.0%
ATGTCTATGTAAACTATGCA+AGG - Chr7:56579137-56579156 MsG0780038997.01.T01:intron 30.0%
CAAAGAGATTCAAGATGATT+TGG + Chr7:56578989-56579008 None:intergenic 30.0%
CAGTGCAGAAAAACAAAATT+AGG + Chr7:56580878-56580897 None:intergenic 30.0%
TAACATATATGTAACGGTGT+CGG - Chr7:56580123-56580142 MsG0780038997.01.T01:intron 30.0%
TATCAACATAAGCAAGAAAG+AGG - Chr7:56578040-56578059 MsG0780038997.01.T01:intron 30.0%
TATTTCGCTATTAGCGAAAT+TGG + Chr7:56579366-56579385 None:intergenic 30.0%
TGATTGTTTATATGGTTGCA+GGG - Chr7:56582142-56582161 MsG0780038997.01.T01:CDS 30.0%
TGTCTATGTAAACTATGCAA+GGG - Chr7:56579138-56579157 MsG0780038997.01.T01:intron 30.0%
TTATAGGGACTAAAAGTTGA+AGG + Chr7:56580677-56580658 None:intergenic 30.0%
TTGATGTCTCAATGAATCTA+GGG - Chr7:56579195-56579214 MsG0780038997.01.T01:intron 30.0%
TTGATTGTTTATATGGTTGC+AGG - Chr7:56582141-56582160 MsG0780038997.01.T01:CDS 30.0%
TTTAGACCCAAGAAACATAT+CGG - Chr7:56581492-56581511 MsG0780038997.01.T01:intron 30.0%
TTTAGAGGGACTAAAACAAA+AGG - Chr7:56580686-56580705 MsG0780038997.01.T01:intron 30.0%
! AGCTTCTTAACATTTTGCTT+AGG - Chr7:56577540-56577559 MsG0780038997.01.T01:intron 30.0%
! CGGACTTTGAGAAAAAAAAT+TGG - Chr7:56577882-56577901 MsG0780038997.01.T01:intron 30.0%
! GCTTCTTAACATTTTGCTTA+GGG - Chr7:56577541-56577560 MsG0780038997.01.T01:intron 30.0%
! TCAAATACTTTTCTCCAAGT+AGG - Chr7:56582372-56582391 MsG0780038997.01.T01:CDS 30.0%
! TGTATTTTCCTGCACAAAAA+GGG - Chr7:56579772-56579791 MsG0780038997.01.T01:intron 30.0%
! TTGTATTTTCCTGCACAAAA+AGG - Chr7:56579771-56579790 MsG0780038997.01.T01:intron 30.0%
!! AAATGCTTGGATTAGTTAGT+AGG + Chr7:56581777-56581796 None:intergenic 30.0%
!! AGTTATCATTAGAGTTTTGG+TGG - Chr7:56577455-56577474 MsG0780038997.01.T01:CDS 30.0%
!! CATGATACCAAGATTTTGAT+TGG - Chr7:56582327-56582346 MsG0780038997.01.T01:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - Chr7:56581292-56581311 MsG0780038997.01.T01:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + Chr7:56581311-56581292 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - Chr7:56581291-56581310 MsG0780038997.01.T01:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + Chr7:56581310-56581291 None:intergenic 30.0%
AAACACAAAGCAAGTGGTTT+AGG + Chr7:56579232-56579251 None:intergenic 35.0%
AACACATTTCTGATTCCTGA+AGG + Chr7:56577832-56577851 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - Chr7:56581276-56581295 MsG0780038997.01.T01:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG + Chr7:56581295-56581276 None:intergenic 35.0%
AATACTGTGTAAGTTCCTTC+AGG - Chr7:56577814-56577833 MsG0780038997.01.T01:intron 35.0%
AATATAGGATCGTTTGCACA+GGG - Chr7:56578500-56578519 MsG0780038997.01.T01:CDS 35.0%
AGATAGAACTATTTCGCTTG+CGG - Chr7:56578633-56578652 MsG0780038997.01.T01:CDS 35.0%
AGCACAACCAATCAAAATCT+TGG + Chr7:56582337-56582356 None:intergenic 35.0%
AGGAATCAGAAATGTGTTTG+TGG - Chr7:56577834-56577853 MsG0780038997.01.T01:intron 35.0%
ATACCATCAATGGATGACAT+TGG + Chr7:56581961-56581980 None:intergenic 35.0%
CATCTACTCTTGTAGTATTG+AGG + Chr7:56579107-56579126 None:intergenic 35.0%
CTAGATTCATTGAGACATCA+AGG + Chr7:56579196-56579215 None:intergenic 35.0%
CTTGATGTCTCAATGAATCT+AGG - Chr7:56579194-56579213 MsG0780038997.01.T01:intron 35.0%
GAGGAAATGGTCGTTAATAT+TGG - Chr7:56582021-56582040 MsG0780038997.01.T01:intron 35.0%
GAGGGACTAAAATGAAAAGT+TGG + Chr7:56580281-56580300 None:intergenic 35.0%
TAATATAGGATCGTTTGCAC+AGG - Chr7:56578499-56578518 MsG0780038997.01.T01:CDS 35.0%
TAGCATATCCTCCAGAAATA+GGG + Chr7:56581894-56581913 None:intergenic 35.0%
TAGTGAACTAACCTATGTAC+TGG + Chr7:56582225-56582244 None:intergenic 35.0%
TATTGAACCGAGAAAAAACC+CGG - Chr7:56577862-56577881 MsG0780038997.01.T01:intron 35.0%
TATTGACGATACTGAAACCT+TGG - Chr7:56577746-56577765 MsG0780038997.01.T01:intron 35.0%
TCTGTCACCATAAACGTTAA+TGG + Chr7:56581922-56581941 None:intergenic 35.0%
TGCACAAAAAGGGTAGAATA+AGG - Chr7:56579782-56579801 MsG0780038997.01.T01:intron 35.0%
! AAATTCTTCAAGTTTGCTCC+TGG - Chr7:56579640-56579659 MsG0780038997.01.T01:intron 35.0%
! ACTACGCTATTAGCGTATTT+TGG + Chr7:56579479-56579498 None:intergenic 35.0%
! ATTAGCCACAAGTTTTGCAA+TGG + Chr7:56577568-56577587 None:intergenic 35.0%
! CTACGCTATTAGCGTATTTT+GGG + Chr7:56579478-56579497 None:intergenic 35.0%
! GATCTTGTTTATTGAAGCAG+AGG - Chr7:56581591-56581610 MsG0780038997.01.T01:intron 35.0%
! TAGAAGTTTTACCTCTCTCT+TGG + Chr7:56579323-56579342 None:intergenic 35.0%
! TAGAGCACCATTAACGTTTA+TGG - Chr7:56581912-56581931 MsG0780038997.01.T01:intron 35.0%
! TTATTCTACCCTTTTTGTGC+AGG + Chr7:56579783-56579802 None:intergenic 35.0%
! TTCTACCTTTGGCTTCTTTA+GGG + Chr7:56582738-56582757 None:intergenic 35.0%
! TTTCTACCTTTGGCTTCTTT+AGG + Chr7:56582739-56582758 None:intergenic 35.0%
! TTTTCTGCATACTTAGAGAG+AGG + Chr7:56579277-56579296 None:intergenic 35.0%
!! AATATTGAAGCACTGAGCTT+TGG - Chr7:56577594-56577613 MsG0780038997.01.T01:intron 35.0%
!! AGAAAAGAGAGTGTCACAAA+GGG - Chr7:56582580-56582599 MsG0780038997.01.T01:CDS 35.0%
!! TTGTAGGTATCGGTAATATC+TGG + Chr7:56581822-56581841 None:intergenic 35.0%
AATAGCGTAGATTTCGCTGA+TGG - Chr7:56579518-56579537 MsG0780038997.01.T01:intron 40.0%
ACTCCAATGTCATCCATTGA+TGG - Chr7:56581955-56581974 MsG0780038997.01.T01:intron 40.0%
ACTTAATGACGTGGAGGAAA+TGG - Chr7:56582008-56582027 MsG0780038997.01.T01:intron 40.0%
AGACATCAAGGATCTTGACA+TGG + Chr7:56579184-56579203 None:intergenic 40.0%
AGAGAGAAACACAAAGCAAG+TGG + Chr7:56579238-56579257 None:intergenic 40.0%
AGCATATCCTCCAGAAATAG+GGG + Chr7:56581893-56581912 None:intergenic 40.0%
AGTTATGCTATCAGCGTAAC+TGG + Chr7:56579673-56579692 None:intergenic 40.0%
ATATGTAACACTCCTCCCAA+GGG + Chr7:56581655-56581674 None:intergenic 40.0%
ATTTCCTCCACGTCATTAAG+TGG + Chr7:56582009-56582028 None:intergenic 40.0%
CATTAACCAGACTACCTACT+TGG + Chr7:56582389-56582408 None:intergenic 40.0%
CTAGCATATCCTCCAGAAAT+AGG + Chr7:56581895-56581914 None:intergenic 40.0%
CTATTAGCGTAAAAGCTCCA+GGG + Chr7:56579503-56579522 None:intergenic 40.0%
GAGGGACTAAAACAAAAGGT+TGG - Chr7:56580690-56580709 MsG0780038997.01.T01:intron 40.0%
GATCCTAAATCCCCTATTTC+TGG - Chr7:56581880-56581899 MsG0780038997.01.T01:intron 40.0%
GATGGCAAATTAACCTGATC+AGG + Chr7:56582704-56582723 None:intergenic 40.0%
GCGAAAACTCATGAAGAACA+TGG + Chr7:56579456-56579475 None:intergenic 40.0%
GTAAACTATGCAAGGGATGA+AGG - Chr7:56579145-56579164 MsG0780038997.01.T01:intron 40.0%
GTTATGCTATCAGCGTAACT+GGG + Chr7:56579672-56579691 None:intergenic 40.0%
GTTTATGGTGACAGATGAGT+TGG - Chr7:56581927-56581946 MsG0780038997.01.T01:intron 40.0%
TATATGTGCATGTACAAGGC+AGG - Chr7:56582671-56582690 MsG0780038997.01.T01:CDS 40.0%
TATGAGTGTTACACAGGTGT+CGG + Chr7:56578268-56578287 None:intergenic 40.0%
TATTAGCGTAAAAGCTCCAG+GGG + Chr7:56579502-56579521 None:intergenic 40.0%
TATTCCCTATTACCTCCTTC+TGG + Chr7:56582047-56582066 None:intergenic 40.0%
TCAAACTGCATGGAAATGCT+TGG + Chr7:56581790-56581809 None:intergenic 40.0%
TCAACATCTGCTTTGACCAA+CGG - Chr7:56582193-56582212 MsG0780038997.01.T01:intron 40.0%
TGTGCAGGAAAATACAAGCA+AGG + Chr7:56579768-56579787 None:intergenic 40.0%
TTAAATCTCCTCCAGAAGCA+TGG - Chr7:56577978-56577997 MsG0780038997.01.T01:CDS 40.0%
TTATGCTATCAGCGTAACTG+GGG + Chr7:56579671-56579690 None:intergenic 40.0%
TTTATATGGTTGCAGGGTCT+CGG - Chr7:56582148-56582167 MsG0780038997.01.T01:CDS 40.0%
TTTCCTCCACGTCATTAAGT+GGG + Chr7:56582008-56582027 None:intergenic 40.0%
TTTGTCTACTTGTTCTGCTG+AGG + Chr7:56577436-56577455 None:intergenic 40.0%
! AGTTTTCTCACCTTTCCCTT+GGG - Chr7:56581637-56581656 MsG0780038997.01.T01:intron 40.0%
! TAGTTTTCTCACCTTTCCCT+TGG - Chr7:56581636-56581655 MsG0780038997.01.T01:intron 40.0%
! TCACAAAGGGTGTGAAATCA+TGG - Chr7:56582593-56582612 MsG0780038997.01.T01:CDS 40.0%
! TCTACCTTTGGCTTCTTTAG+GGG + Chr7:56582737-56582756 None:intergenic 40.0%
! TTTTCTCCAAGTAGGTAGTC+TGG - Chr7:56582380-56582399 MsG0780038997.01.T01:CDS 40.0%
!! ACTAACCTATGTACTGGTTG+AGG + Chr7:56582219-56582238 None:intergenic 40.0%
!! GAGAAAAGAGAGTGTCACAA+AGG - Chr7:56582579-56582598 MsG0780038997.01.T01:CDS 40.0%
!! TGAGCTCAGAAAAGTGCTTA+AGG - Chr7:56581734-56581753 MsG0780038997.01.T01:intron 40.0%
!! TTTTTACATTAGCGGTGTCG+CGG - Chr7:56580156-56580175 MsG0780038997.01.T01:intron 40.0%
!!! TCAAAGTCCGGGTTTTTTCT+CGG + Chr7:56577872-56577891 None:intergenic 40.0%
ACGCTGATAGCATAACTCTC+TGG - Chr7:56579676-56579695 MsG0780038997.01.T01:intron 45.0%
AGACCCAAGAAACATATCGG+AGG - Chr7:56581495-56581514 MsG0780038997.01.T01:intron 45.0%
AGCTCGTATGAGTGTTACAC+AGG + Chr7:56578274-56578293 None:intergenic 45.0%
AGGGACCATTGCAAAACTTG+TGG - Chr7:56577560-56577579 MsG0780038997.01.T01:intron 45.0%
ATCAAGCCAAGAAACTCAGC+AGG - Chr7:56577696-56577715 MsG0780038997.01.T01:intron 45.0%
ATGAAGCACGGATTCTGACA+CGG + Chr7:56580209-56580228 None:intergenic 45.0%
ATTGGCCAGAAGGAGGTAAT+AGG - Chr7:56582039-56582058 MsG0780038997.01.T01:intron 45.0%
CAAGAAACATATCGGAGGTG+GGG - Chr7:56581500-56581519 MsG0780038997.01.T01:intron 45.0%
CAGTGAATAGTCCAAGAGAG+AGG - Chr7:56579309-56579328 MsG0780038997.01.T01:intron 45.0%
CATATGTAACACTCCTCCCA+AGG + Chr7:56581656-56581675 None:intergenic 45.0%
CCAAGAAACATATCGGAGGT+GGG - Chr7:56581499-56581518 MsG0780038997.01.T01:intron 45.0%
CCACCTCCGATATGTTTCTT+GGG + Chr7:56581501-56581520 None:intergenic 45.0%
CCTCCAGAAATAGGGGATTT+AGG + Chr7:56581886-56581905 None:intergenic 45.0%
CGATATCACTTTGGACACGA+AGG + Chr7:56578755-56578774 None:intergenic 45.0%
CGTTAATATTGGCCAGAAGG+AGG - Chr7:56582032-56582051 MsG0780038997.01.T01:intron 45.0%
CTCATGAAGAACATGGCACA+AGG + Chr7:56579449-56579468 None:intergenic 45.0%
GATGGCAACTTTCTTCAAGG+CGG - Chr7:56579536-56579555 MsG0780038997.01.T01:intron 45.0%
GCTATTAGCGTAAAAGCTCC+AGG + Chr7:56579504-56579523 None:intergenic 45.0%
GCTGATGGCAACTTTCTTCA+AGG - Chr7:56579533-56579552 MsG0780038997.01.T01:intron 45.0%
GGTCGTTAATATTGGCCAGA+AGG - Chr7:56582029-56582048 MsG0780038997.01.T01:intron 45.0%
GTTCGTGAGTTCAAACTGCA+TGG + Chr7:56581800-56581819 None:intergenic 45.0%
GTTGGTCAAAGCAGATGTTG+AGG + Chr7:56582194-56582213 None:intergenic 45.0%
TACTTCGACACTCCTACGAT+CGG - Chr7:56578239-56578258 MsG0780038997.01.T01:CDS 45.0%
TATGAAGCACGGACACATCT+AGG - Chr7:56578114-56578133 MsG0780038997.01.T01:intron 45.0%
TCGCTATTAGCGAAGCATGT+CGG - Chr7:56579387-56579406 MsG0780038997.01.T01:intron 45.0%
TCTTGTATCTATGGTGTGCG+CGG + Chr7:56578350-56578369 None:intergenic 45.0%
TCTTTGGTCACAGACATGCA+AGG - Chr7:56577665-56577684 MsG0780038997.01.T01:intron 45.0%
TTGGCCAGAAGGAGGTAATA+GGG - Chr7:56582040-56582059 MsG0780038997.01.T01:intron 45.0%
! CTACCTTTGGCTTCTTTAGG+GGG + Chr7:56582736-56582755 None:intergenic 45.0%
! GGAGTGTTACATATGCTCGA+AGG - Chr7:56581661-56581680 MsG0780038997.01.T01:intron 45.0%
! TCTATTTGCTGAGGCAGAGA+AGG - Chr7:56577497-56577516 MsG0780038997.01.T01:intron 45.0%
! TTTAGGGGGCTAGCATTAGA+TGG + Chr7:56582722-56582741 None:intergenic 45.0%
!! CCTAAATCCCCTATTTCTGG+AGG - Chr7:56581883-56581902 MsG0780038997.01.T01:intron 45.0%
!! TGTCATTGACTCCATGCTTC+TGG + Chr7:56577992-56578011 None:intergenic 45.0%
!! ATAGATTATTATTATTATTA+GGG - Chr7:56580227-56580246 MsG0780038997.01.T01:intron 5.0%
!!! AAAAAATTCTAAATTTTTTT+GGG + Chr7:56580444-56580463 None:intergenic 5.0%
!!! AAAAAATTCTAATTTTTTTT+TGG - Chr7:56580537-56580556 MsG0780038997.01.T01:intron 5.0%
!!! AAAAATTCTAATTTTTTTTT+GGG - Chr7:56580538-56580557 MsG0780038997.01.T01:intron 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - Chr7:56581231-56581250 MsG0780038997.01.T01:intron 5.0%
!!! ATGAATTTTTATATTTTTTA+TGG - Chr7:56580483-56580502 MsG0780038997.01.T01:intron 5.0%
!!! TAAAAAATTCTAAATTTTTT+TGG + Chr7:56580445-56580464 None:intergenic 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - Chr7:56581232-56581251 MsG0780038997.01.T01:intron 5.0%
AACATATCGGAGGTGGGGAT+CGG - Chr7:56581505-56581524 MsG0780038997.01.T01:intron 50.0%
AACGGCCTCAACCAGTACAT+AGG - Chr7:56582211-56582230 MsG0780038997.01.T01:intron 50.0%
ACAGAGGTAGAAGGACTCCA+AGG + Chr7:56577766-56577785 None:intergenic 50.0%
CCCAAGAAACATATCGGAGG+TGG - Chr7:56581498-56581517 MsG0780038997.01.T01:intron 50.0%
CCCACCTCCGATATGTTTCT+TGG + Chr7:56581502-56581521 None:intergenic 50.0%
CTCGTCATCACAGAGGTAGA+AGG + Chr7:56577775-56577794 None:intergenic 50.0%
GAAGGTCCCACTTAATGACG+TGG - Chr7:56581999-56582018 MsG0780038997.01.T01:intron 50.0%
GAGATTGCTGCTGTTACGCT+TGG + Chr7:56578672-56578691 None:intergenic 50.0%
GTTACGCCATCAGCGAAATC+TGG + Chr7:56579576-56579595 None:intergenic 50.0%
TAACACTCCTCCCAAGGGAA+AGG + Chr7:56581650-56581669 None:intergenic 50.0%
TAGCCCCCTAAAGAAGCCAA+AGG - Chr7:56582730-56582749 MsG0780038997.01.T01:CDS 50.0%
TGAGCACCTGCTGAGTTTCT+TGG + Chr7:56577705-56577724 None:intergenic 50.0%
TGCAAGTCTCGTCATCACAG+AGG + Chr7:56577782-56577801 None:intergenic 50.0%
TGCATGTACAAGGCAGGAAG+TGG - Chr7:56582677-56582696 MsG0780038997.01.T01:CDS 50.0%
TTCGCTCCAGATTTCGCTGA+TGG - Chr7:56579567-56579586 MsG0780038997.01.T01:intron 50.0%
TTTCTCACCTTTCCCTTGGG+AGG - Chr7:56581640-56581659 MsG0780038997.01.T01:intron 50.0%
! ATGTGTCGTACGGGTGTCAT+AGG + Chr7:56578184-56578203 None:intergenic 50.0%
!! AAGCATGTCGGCTTAAGTGG+TGG - Chr7:56579399-56579418 MsG0780038997.01.T01:intron 50.0%
!! CATTGACTCCATGCTTCTGG+AGG + Chr7:56577989-56578008 None:intergenic 50.0%
!! TATGTACTGGTTGAGGCCGT+TGG + Chr7:56582212-56582231 None:intergenic 50.0%
ACATGGCACAAGGACCAACG+TGG + Chr7:56579439-56579458 None:intergenic 55.0%
ACGCTAATAGCGTAGTCCCC+TGG - Chr7:56579483-56579502 MsG0780038997.01.T01:intron 55.0%
CCAACGTGGCATAACCCCAT+TGG + Chr7:56579425-56579444 None:intergenic 55.0%
CCAATGGGGTTATGCCACGT+TGG - Chr7:56579422-56579441 MsG0780038997.01.T01:intron 55.0%
CCGTACGACACATGTCGAAC+CGG - Chr7:56578191-56578210 MsG0780038997.01.T01:CDS 55.0%
CGGCTTAAGTGGTGGCCAAT+GGG - Chr7:56579407-56579426 MsG0780038997.01.T01:intron 55.0%
CGGTTCGACATGTGTCGTAC+GGG + Chr7:56578193-56578212 None:intergenic 55.0%
GGCTTAAGTGGTGGCCAATG+GGG - Chr7:56579408-56579427 MsG0780038997.01.T01:intron 55.0%
GGTCCCACTTAATGACGTGG+AGG - Chr7:56582002-56582021 MsG0780038997.01.T01:intron 55.0%
GGTGGGGATCGGTGAAGAAA+AGG - Chr7:56581516-56581535 MsG0780038997.01.T01:intron 55.0%
TCGGCTTAAGTGGTGGCCAA+TGG - Chr7:56579406-56579425 MsG0780038997.01.T01:intron 55.0%
! CCGGTTCGACATGTGTCGTA+CGG + Chr7:56578194-56578213 None:intergenic 55.0%
! GCACGGACACATCTAGGACT+AGG - Chr7:56578120-56578139 MsG0780038997.01.T01:intron 55.0%
! TCGCTGATGGCGTAACTGTC+TGG - Chr7:56579580-56579599 MsG0780038997.01.T01:intron 55.0%
!! GCGAAGCATGTCGGCTTAAG+TGG - Chr7:56579396-56579415 MsG0780038997.01.T01:intron 55.0%
CACCGCGACACGACACGATA+CGG + Chr7:56580185-56580204 None:intergenic 60.0%
CTATCAGCGTAACTGGGGCG+AGG + Chr7:56579666-56579685 None:intergenic 60.0%
GGCAGGAAGTGGACCTGATC+AGG - Chr7:56582688-56582707 MsG0780038997.01.T01:CDS 60.0%
GTCCGTATCGTGTCGTGTCG+CGG - Chr7:56580180-56580199 MsG0780038997.01.T01:intron 60.0%
TGTCAGACACCGACGCGTGT+CGG + Chr7:56578159-56578178 None:intergenic 60.0%
!! AGGTGTCGGACACCGATCGT+AGG + Chr7:56578254-56578273 None:intergenic 60.0%
TCGCTGTGTCCGACACGCGT+CGG - Chr7:56578147-56578166 MsG0780038997.01.T01:CDS 65.0%
AGCGTAACTGGGGCGAGGCC+AGG + Chr7:56579661-56579680 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 56577420 56582763 56577420 ID=MsG0780038997.01;Name=MsG0780038997.01
Chr7 mRNA 56577420 56582763 56577420 ID=MsG0780038997.01.T01;Parent=MsG0780038997.01;Name=MsG0780038997.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|418
Chr7 exon 56582362 56582763 56582362 ID=MsG0780038997.01.T01:exon:8088;Parent=MsG0780038997.01.T01
Chr7 exon 56582122 56582190 56582122 ID=MsG0780038997.01.T01:exon:8087;Parent=MsG0780038997.01.T01
Chr7 exon 56578130 56578774 56578130 ID=MsG0780038997.01.T01:exon:8086;Parent=MsG0780038997.01.T01
Chr7 exon 56577951 56578020 56577951 ID=MsG0780038997.01.T01:exon:8085;Parent=MsG0780038997.01.T01
Chr7 exon 56577420 56577490 56577420 ID=MsG0780038997.01.T01:exon:8084;Parent=MsG0780038997.01.T01
Chr7 CDS 56582362 56582763 56582362 ID=MsG0780038997.01.T01:cds;Parent=MsG0780038997.01.T01
Chr7 CDS 56582122 56582190 56582122 ID=MsG0780038997.01.T01:cds;Parent=MsG0780038997.01.T01
Chr7 CDS 56578130 56578774 56578130 ID=MsG0780038997.01.T01:cds;Parent=MsG0780038997.01.T01
Chr7 CDS 56577951 56578020 56577951 ID=MsG0780038997.01.T01:cds;Parent=MsG0780038997.01.T01
Chr7 CDS 56577420 56577490 56577420 ID=MsG0780038997.01.T01:cds;Parent=MsG0780038997.01.T01
Gene Sequence

>MsG0780038997.01.T01

ATGGCTGAAAATACCTCAGCAGAACAAGTAGACAAAGTTATCATTAGAGTTTTGGTGGACAAGAAGAAAAATAAAGTTCTATTTGCTGAGGCAGAGAAGGATTTTGTTCATGTTCTTTTGAGCTTCTTAACATTTTGCTTAGGGACCATTGCAAAACTTGTGGCTAATGACTCAAATATTGAAGCACTGAGCTTTGGCAGCATTAGTTCACTGTATCAAAGTGTGTCAGATCTTGATGAAAAATATCTTTGGTCACAGACATGCAAGGACATGCTTATCAAGCCAAGAAACTCAGCAGGTGCTCATTGCCAGAATATGAAACTGAATATTGACGATACTGAAACCTTGGAGTCCTTCTACCTCTGTGATGACGAGACTTGCAGAATTGAAAATAAATACTGTAAGCATGGAGTCAATGACATTGATGCTATTGATAAACAAATCCTTAATATCAACATAAGCAAGAAAGAGGTAGTTAATCTTCTCAAATTGTCTTTGGTATCAAAAACTCCTATGTCAGACTTCATATTTAAAAAGGAACAATTTGTTAGTAATTTAGACCCAAGAAACATATCGGAGGTGGGGATCGGTGAAGAAAAGGAACAATGTGATGAAATGGTTGTGAAAGTAGTGAGAAGAAAATCAAATAAGCAGATCTTGTTTATTGAAGCAGAGGAAGATTTTGCTGATTTTGTTTTTAGTTTTCTCACCTTTCCCTTGGGAGGAGTGTTACATATGCTCGAAGGATTCTCTTCCTTAAGCTGCATTGATAATTTATATAAGAGTGTGACTGAATTGAGCTCAGAAAAGTGCTTAAGGTCACAGTATTTCAAAAACCTACTAACTAATCCAAGCATTTCCATGCAGTTTGAACTCACGAACCAGATATTACCGATACCTACAAAAAATCATAAGGAAAAAAATATGTCAATTAAATTTGTTGATCCTAAATCCCCTATTTCTGGAGGATATGCTAGAGCACCATTAACGTTTATGGTGACAGATGAGTTGGTTGTGACTCCAATGTCATCCATTGATGGTATTTCATATCTTGAAAGAATGAAGGTCCCACTTAATGACGTGGAGGAAATGGTCGTTAATATTGGCCAGAAGGAGGGTCTCGGCATACTTAAAGCTTCACTGACCTCAACATCTGCTTTGACCAACGGCCTCAACCAGTACATAGGAAGTGGACCTGATCAGGTTAATTTGCCATCTAATGCTAGCCCCCTAAAGAAGCCAAAGGTAGAAAAATGA
Protein sequence

>MsG0780038997.01.T01

MAENTSAEQVDKVIIRVLVDKKKNKVLFAEAEKDFVHVLLSFLTFCLGTIAKLVANDSNIEALSFGSISSLYQSVSDLDEKYLWSQTCKDMLIKPRNSAGAHCQNMKLNIDDTETLESFYLCDDETCRIENKYCKHGVNDIDAIDKQILNINISKKEVVNLLKLSLVSKTPMSDFIFKKEQFVSNLDPRNISEVGIGEEKEQCDEMVVKVVRRKSNKQILFIEAEEDFADFVFSFLTFPLGGVLHMLEGFSSLSCIDNLYKSVTELSSEKCLRSQYFKNLLTNPSISMQFELTNQILPIPTKNHKEKNMSIKFVDPKSPISGGYARAPLTFMVTDELVVTPMSSIDGISYLERMKVPLNDVEEMVVNIGQKEGLGILKASLTSTSALTNGLNQYIGSGPDQVNLPSNASPLKKPKVEK*