AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040432.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040432.01.T01 MTR_7g090120 82.699 289 26 2 15 301 25 291 5.91e-160 468
MsG0780040432.01.T01 MTR_7g090120 65.462 249 41 5 302 505 369 617 1.90e-91 291
MsG0780040432.01.T01 MTR_7g090100 82.332 283 28 2 19 301 31 291 6.70e-155 455
MsG0780040432.01.T01 MTR_7g090100 61.538 247 52 5 302 505 369 615 7.22e-85 274
MsG0780040432.01.T01 MTR_7g090140 80.919 283 32 3 19 301 31 291 8.78e-153 449
MsG0780040432.01.T01 MTR_7g090140 62.500 248 48 4 302 505 369 615 1.48e-86 279
MsG0780040432.01.T01 MTR_4g054290 78.799 283 38 2 19 301 31 291 7.39e-149 439
MsG0780040432.01.T01 MTR_4g054290 52.049 244 72 5 302 500 369 612 1.33e-65 223
MsG0780040432.01.T01 MTR_4g054150 72.085 283 36 3 19 301 31 270 1.60e-128 387
MsG0780040432.01.T01 MTR_4g054150 50.806 248 69 3 302 500 348 591 1.36e-68 231
MsG0780040432.01.T01 MTR_8g009590 40.175 570 203 13 61 499 90 652 9.10e-118 361
MsG0780040432.01.T01 MTR_7g090140 90.306 196 19 0 106 301 1 196 4.31e-117 355
MsG0780040432.01.T01 MTR_7g090140 63.306 248 46 6 302 505 274 520 1.11e-87 279
MsG0780040432.01.T01 MTR_8g009560 71.849 238 67 0 64 301 57 294 1.91e-114 351
MsG0780040432.01.T01 MTR_8g009560 40.000 245 101 4 302 500 372 616 3.67e-47 173
MsG0780040432.01.T01 MTR_4g129630 39.381 226 137 0 64 289 56 281 1.05e-52 189
MsG0780040432.01.T01 MTR_4g129630 29.020 255 124 8 302 501 374 626 1.21e-21 99.0
MsG0780040432.01.T01 MTR_8g009550 62.162 74 25 1 180 253 17 87 7.02e-23 93.2
MsG0780040432.01.T01 MTR_4g054320 81.579 38 7 0 463 500 57 94 5.66e-16 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040432.01.T01 AT1G02205 61.938 289 107 1 13 301 9 294 1.04e-111 344
MsG0780040432.01.T01 AT1G02205 46.087 115 62 0 302 416 372 486 1.98e-27 116
MsG0780040432.01.T01 AT1G02205 70.124 241 72 0 61 301 55 295 1.16e-111 344
MsG0780040432.01.T01 AT1G02205 46.087 115 62 0 302 416 373 487 2.16e-27 116
MsG0780040432.01.T01 AT1G02205 61.938 289 107 1 13 301 9 294 1.59e-111 344
MsG0780040432.01.T01 AT1G02205 46.087 115 62 0 302 416 372 486 2.09e-27 116
MsG0780040432.01.T01 AT1G02190 66.935 248 82 0 54 301 47 294 2.03e-107 333
MsG0780040432.01.T01 AT1G02190 35.537 242 108 6 306 499 377 618 1.02e-38 149
MsG0780040432.01.T01 AT1G02190 66.935 248 82 0 54 301 47 294 2.48e-107 333
MsG0780040432.01.T01 AT1G02190 35.772 246 110 6 302 499 377 622 7.20e-40 153
MsG0780040432.01.T01 AT2G37700 64.372 247 88 0 54 300 43 289 3.13e-105 323
MsG0780040432.01.T01 AT2G37700 47.107 121 62 2 285 405 354 472 2.39e-26 112
MsG0780040432.01.T01 AT2G37700 64.372 247 88 0 54 300 43 289 7.12e-104 323
MsG0780040432.01.T01 AT2G37700 36.471 255 120 6 285 499 354 606 7.98e-40 152
MsG0780040432.01.T01 AT2G37700 64.372 247 88 0 54 300 43 289 1.02e-103 323
MsG0780040432.01.T01 AT2G37700 35.227 264 120 7 285 499 354 615 2.27e-39 151
MsG0780040432.01.T01 AT2G37700 37.201 543 237 12 54 499 43 578 7.02e-100 312
MsG0780040432.01.T01 AT1G02205 65.854 123 42 0 179 301 8 130 1.24e-48 174
MsG0780040432.01.T01 AT1G02205 46.087 115 62 0 302 416 208 322 8.35e-28 116
MsG0780040432.01.T01 AT5G57800 37.611 226 136 3 64 284 54 279 3.25e-44 165
MsG0780040432.01.T01 AT5G57800 29.615 260 123 9 302 505 377 632 6.06e-20 93.6
MsG0780040432.01.T01 AT1G02205 46.087 115 62 0 302 416 133 247 2.38e-28 116
MsG0780040432.01.T01 AT1G02205 68.750 48 15 0 254 301 8 55 9.82e-15 76.3

Find 92 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGAGCACTTGGCATATTT+TGG 0.144394 7:-77432227 MsG0780040432.01.T01:CDS
CATTGATTTCATGAATAATA+TGG 0.158342 7:-77432126 MsG0780040432.01.T01:CDS
CCAATGTATGACTACATTTA+TGG 0.163251 7:-77431882 MsG0780040432.01.T01:CDS
GAAACTAGTGTTCCAGTTAC+TGG 0.235587 7:-77435927 MsG0780040432.01.T01:CDS
TGCTTAGCACTGAGAAAGTA+TGG 0.261801 7:-77429489 MsG0780040432.01.T01:CDS
CATGCACTCATTACTCTTCT+TGG 0.283707 7:+77429573 None:intergenic
AAGTATGAGAAGAGCTTCTT+AGG 0.288555 7:+77432080 None:intergenic
TCATCTGTGGTTGCACTATA+TGG 0.295451 7:-77432161 MsG0780040432.01.T01:CDS
TTCTTGTAGTGTATTGTATT+GGG 0.298451 7:+77434861 None:intergenic
AATTACTAGTTAAAATTGTT+TGG 0.305569 7:+77429972 None:intergenic
ATGAACATTCCATCCTTCTA+AGG 0.317589 7:+77429528 None:intergenic
TTCAAAGACAAGGATGATTA+AGG 0.323480 7:-77435973 None:intergenic
TTTCTTGTAGTGTATTGTAT+TGG 0.329410 7:+77434860 None:intergenic
ACAGCATATACTCTTTCATA+TGG 0.346547 7:-77434895 MsG0780040432.01.T01:intron
ATGGTTTCTCGCTGAAATTA+AGG 0.359963 7:-77434802 MsG0780040432.01.T01:CDS
AGCACTTGAATTGTTCCTTT+GGG 0.364071 7:+77430357 None:intergenic
AAGCACTTGAATTGTTCCTT+TGG 0.364500 7:+77430356 None:intergenic
AATCCGACAAACCCAGTAAC+TGG 0.366639 7:+77435915 None:intergenic
GCAGGTAGTTGTGTTATATA+AGG 0.379040 7:-77430095 MsG0780040432.01.T01:intron
GAATGCTACACAATCAGATT+TGG 0.381888 7:-77433146 MsG0780040432.01.T01:CDS
GTAATGCAGTGAACAAAATT+TGG 0.383523 7:+77432807 None:intergenic
GGAATAATTCATGCCTTAGA+AGG 0.384364 7:-77429541 MsG0780040432.01.T01:CDS
TTTGTGAGAATATTCTTTAG+AGG 0.384609 7:+77429439 None:intergenic
TGTATGAGAGATACTTCAAT+TGG 0.385701 7:+77432054 None:intergenic
CTCTTTCATATGGGTTGAAA+GGG 0.390727 7:-77434885 MsG0780040432.01.T01:CDS
ATTGATTTCATGAATAATAT+GGG 0.400884 7:-77432125 MsG0780040432.01.T01:CDS
ACTGCATTACTATATTATAT+AGG 0.401173 7:-77432794 MsG0780040432.01.T01:CDS
ACCACATCTGGTGACTCCTT+TGG 0.419685 7:+77431810 None:intergenic
TATGCCAAGTGCTCAGCAAA+TGG 0.423575 7:+77432233 None:intergenic
TTCACGTTCGATAACCTACT+TGG 0.424029 7:+77429412 None:intergenic
AAAGAGTTCATACAAGTGAT+AGG 0.424171 7:+77432590 None:intergenic
TCTCCACCATGGTAAGTTAG+AGG 0.426273 7:+77432751 None:intergenic
TTGAAGATAAAAGTTGTAGA+TGG 0.435173 7:-77430417 MsG0780040432.01.T01:CDS
TATCGACTTGTTCAAATTCG+AGG 0.438908 7:+77433067 None:intergenic
GATAACGAGAGTATAAATAA+TGG 0.451529 7:+77432645 None:intergenic
CATTACATCACACTAAATTC+AGG 0.454040 7:-77431926 MsG0780040432.01.T01:CDS
GTACGTAGTATTTCTCCAAA+AGG 0.455229 7:-77431434 MsG0780040432.01.T01:intron
TGTGTTAAGTGCACCACATC+TGG 0.460275 7:+77431798 None:intergenic
TCACGCTATCAAACTGCTAA+AGG 0.461802 7:-77433114 MsG0780040432.01.T01:CDS
TGGGAAGCAAGCATTCGTTA+TGG 0.467538 7:-77429469 MsG0780040432.01.T01:CDS
TGACATGTCAAAAGGAAACT+TGG 0.474018 7:-77430056 MsG0780040432.01.T01:CDS
ATTGTGGAGGCTGAGTTAAA+TGG 0.476286 7:-77431375 MsG0780040432.01.T01:CDS
TCAACACAATTGCAGCAGTT+AGG 0.480835 7:+77430388 None:intergenic
AATGAGTGCATGGCGTATGC+TGG 0.481567 7:-77429562 MsG0780040432.01.T01:CDS
CAGCATATACTCTTTCATAT+GGG 0.481965 7:-77434894 MsG0780040432.01.T01:CDS
ACACCCATTTGCTGAGCACT+TGG 0.485542 7:-77432237 MsG0780040432.01.T01:CDS
ACTCTTTCATATGGGTTGAA+AGG 0.488964 7:-77434886 MsG0780040432.01.T01:CDS
TCAACCTTTGGTGTATTGAA+TGG 0.492528 7:+77430025 None:intergenic
AGGATACATGATATTTCCTA+TGG 0.497955 7:-77432774 MsG0780040432.01.T01:CDS
AAAGAGCTTGACATGTCAAA+AGG 0.499070 7:-77430064 MsG0780040432.01.T01:CDS
CTTGATTGAAGAGGCAATTG+TGG 0.502164 7:-77431391 MsG0780040432.01.T01:CDS
GTATGAGAGATACTTCAATT+GGG 0.505379 7:+77432055 None:intergenic
AGCGAGAAACCATTGTTCCT+CGG 0.505937 7:+77434812 None:intergenic
AAACTAGTGTTCCAGTTACT+GGG 0.506289 7:-77435926 MsG0780040432.01.T01:intron
GCTCTTCTTGAGGAGAAGAA+TGG 0.520913 7:-77435951 MsG0780040432.01.T01:CDS
GGAGCAAAGGTGATAAGTCT+AGG 0.524251 7:-77431354 MsG0780040432.01.T01:CDS
ATGCCAAGTGCTCAGCAAAT+GGG 0.531726 7:+77432234 None:intergenic
ACAATTCAAGTGCTTCTTCG+AGG 0.532656 7:-77430348 MsG0780040432.01.T01:CDS
TTCTCCATTCAATACACCAA+AGG 0.535104 7:-77430029 MsG0780040432.01.T01:CDS
ATTTAACAACTTGATTGAAG+AGG 0.538036 7:-77431400 MsG0780040432.01.T01:CDS
ACTGTGAACATTATATTCAA+AGG 0.541828 7:-77430449 MsG0780040432.01.T01:CDS
AAGTCGATAGAGAAACCAAT+TGG 0.548372 7:-77433053 MsG0780040432.01.T01:intron
CTTGCATAAAGCATTAGCAA+TGG 0.548575 7:+77430302 None:intergenic
CTCCTTTGGTCTCATCAATG+AGG 0.554219 7:+77431824 None:intergenic
CTATGGCCTCTAACTTACCA+TGG 0.558995 7:-77432757 MsG0780040432.01.T01:CDS
TAATTCATGCCTTAGAAGGA+TGG 0.560259 7:-77429537 MsG0780040432.01.T01:CDS
GATGATTAAGGCTCTTCTTG+AGG 0.563800 7:-77435961 MsG0780040432.01.T01:CDS
TTCTCACAAATTAACCAAGT+AGG 0.569707 7:-77429426 MsG0780040432.01.T01:exon
CTTACAGCAATATTGCATGC+TGG 0.570938 7:-77432713 MsG0780040432.01.T01:CDS
GCTTAGCACTGAGAAAGTAT+GGG 0.577653 7:-77429488 MsG0780040432.01.T01:CDS
GGCTGAGTTAAATGGAGCAA+AGG 0.578535 7:-77431367 MsG0780040432.01.T01:CDS
ACCAAAGGAGTCACCAGATG+TGG 0.584427 7:-77431811 MsG0780040432.01.T01:intron
CCATAAATGTAGTCATACAT+TGG 0.588550 7:+77431882 None:intergenic
GGCTTCATATGTAGCATCTG+TGG 0.589327 7:+77431845 None:intergenic
CAAGAAGAGTAATGAGTGCA+TGG 0.592300 7:-77429572 MsG0780040432.01.T01:CDS
ATAGGTTATCGAAACGTGAA+AGG 0.606432 7:-77429322 MsG0780040432.01.T01:three_prime_UTR
GTATGACTACATTTATGGTA+CGG 0.609427 7:-77431877 MsG0780040432.01.T01:CDS
GGATGGAATGTTCATGAATG+TGG 0.610974 7:-77429520 MsG0780040432.01.T01:CDS
ATCGAAACGTGAAAGGTCAT+CGG 0.612290 7:-77429315 MsG0780040432.01.T01:three_prime_UTR
GCTCAGTGACAATTGATGAA+TGG 0.618091 7:+77432612 None:intergenic
TTACCATGGTGGAGAACAGA+TGG 0.618214 7:-77432743 MsG0780040432.01.T01:CDS
TATGAGAGATACTTCAATTG+GGG 0.627887 7:+77432056 None:intergenic
CATGGTAAGTTAGAGGCCAT+AGG 0.634259 7:+77432758 None:intergenic
AAAAGTAGAATTGTTGACAA+AGG 0.634473 7:-77433090 MsG0780040432.01.T01:CDS
AATATTGCATGCTGGACCAG+TGG 0.640771 7:-77432705 MsG0780040432.01.T01:CDS
GTGTTGAACAACATTCCCAA+AGG 0.656188 7:-77430372 MsG0780040432.01.T01:CDS
GCTGAAATTAAGGATTTCCG+AGG 0.664848 7:-77434792 MsG0780040432.01.T01:CDS
AGCCTCATTGATGAGACCAA+AGG 0.666714 7:-77431826 MsG0780040432.01.T01:CDS
ACACCATCTGTTCTCCACCA+TGG 0.679185 7:+77432740 None:intergenic
GATTGAAGAGGCAATTGTGG+AGG 0.683278 7:-77431388 MsG0780040432.01.T01:CDS
TGGCCTCTAACTTACCATGG+TGG 0.709799 7:-77432754 MsG0780040432.01.T01:CDS
ATGGTGGAGAACAGATGGTG+TGG 0.733193 7:-77432738 MsG0780040432.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTAATTTTTAATTTT+TGG - Chr7:77429360-77429379 MsG0780040432.01.T01:three_prime_UTR 0.0%
!! TTATACAAAAAAAAGTTTAT+AGG - Chr7:77430140-77430159 MsG0780040432.01.T01:intron 10.0%
!! TTGAATTAATAAATTATCAA+TGG + Chr7:77432248-77432267 None:intergenic 10.0%
!! TTTCTTAATTAATTATATAG+AGG - Chr7:77432207-77432226 MsG0780040432.01.T01:CDS 10.0%
!!! AACTAAAAATTGATTTATTT+CGG + Chr7:77429574-77429593 None:intergenic 10.0%
!!! ATTTGGAATTTTAAAATATT+TGG - Chr7:77431631-77431650 MsG0780040432.01.T01:intron 10.0%
!!! ATTTTTTTTAACTAACTATT+AGG - Chr7:77432335-77432354 MsG0780040432.01.T01:intron 10.0%
!!! TACTTATTTTTCTAAAAAAA+TGG - Chr7:77433916-77433935 MsG0780040432.01.T01:intron 10.0%
!!! TTTTTTTTAACTAACTATTA+GGG - Chr7:77432336-77432355 MsG0780040432.01.T01:intron 10.0%
!! AAAAAAGAAAAAATATTCAC+AGG - Chr7:77432849-77432868 MsG0780040432.01.T01:intron 15.0%
!! AATCATCATTATATTATCAA+TGG + Chr7:77432285-77432304 None:intergenic 15.0%
!! AATGCTAATAAATTAAAAGT+AGG + Chr7:77433897-77433916 None:intergenic 15.0%
!! AATTACTAGTTAAAATTGTT+TGG + Chr7:77435228-77435247 None:intergenic 15.0%
!! ATAAATACAAACTAGTTATT+TGG - Chr7:77431359-77431378 MsG0780040432.01.T01:CDS 15.0%
!! ATTTATATATGTAACAGAAT+TGG - Chr7:77435598-77435617 MsG0780040432.01.T01:intron 15.0%
!! TAAATAAATTTCGAATTATG+TGG + Chr7:77435256-77435275 None:intergenic 15.0%
!! TAAGAAAGACAAATATTTAA+AGG + Chr7:77432194-77432213 None:intergenic 15.0%
!! TAAGTTATTCTAATGATTTA+TGG - Chr7:77435068-77435087 MsG0780040432.01.T01:intron 15.0%
!! TTAAAATAAAATTTCATGAG+TGG - Chr7:77434508-77434527 MsG0780040432.01.T01:intron 15.0%
!! TTATAATCATAGAATAAATC+CGG + Chr7:77434992-77435011 None:intergenic 15.0%
!!! ATAAATCAATTTTTAGTTAG+AGG - Chr7:77429576-77429595 MsG0780040432.01.T01:CDS 15.0%
!!! ATATATTTTTAGAACATACA+TGG + Chr7:77435929-77435948 None:intergenic 15.0%
!!! ATCATTTTTTTTTCTTCTAT+TGG - Chr7:77434051-77434070 MsG0780040432.01.T01:intron 15.0%
!!! ATTGATTTCATGAATAATAT+GGG - Chr7:77433072-77433091 MsG0780040432.01.T01:CDS 15.0%
!!! GAAATTCGAAATTTAAAATT+TGG - Chr7:77431596-77431615 MsG0780040432.01.T01:intron 15.0%
!!! GAAATTTAAAATTTTGAAAC+AGG - Chr7:77431695-77431714 MsG0780040432.01.T01:intron 15.0%
!!! GAAATTTGAAATTTAAAAAC+AGG - Chr7:77431664-77431683 MsG0780040432.01.T01:intron 15.0%
!!! TTGAGTTAAAAATTTGTTAT+AGG - Chr7:77435857-77435876 MsG0780040432.01.T01:intron 15.0%
!!! TTTAAAGGCAATTTAAAATT+TGG + Chr7:77432179-77432198 None:intergenic 15.0%
!!! TTTTTGGATTTATTTGATAA+AGG - Chr7:77429376-77429395 MsG0780040432.01.T01:intron 15.0%
!! AAAAAATTACCAACTTTACT+AGG + Chr7:77429891-77429910 None:intergenic 20.0%
!! AAAAATTACCAACTTTACTA+GGG + Chr7:77429890-77429909 None:intergenic 20.0%
!! AAAAATTTAAATAGCATACC+TGG + Chr7:77435954-77435973 None:intergenic 20.0%
!! AAATAGTAATCCTAGAAAAA+AGG + Chr7:77431542-77431561 None:intergenic 20.0%
!! ACTGCATTACTATATTATAT+AGG - Chr7:77432403-77432422 MsG0780040432.01.T01:intron 20.0%
!! AGATTTATTCAAAAAACGTT+AGG + Chr7:77429509-77429528 None:intergenic 20.0%
!! GATTTATTCAAAAAACGTTA+GGG + Chr7:77429508-77429527 None:intergenic 20.0%
!! TAACAACTAATGATTAAACA+AGG - Chr7:77435274-77435293 MsG0780040432.01.T01:intron 20.0%
!! TATATGGAACTCTTTATATA+CGG + Chr7:77429941-77429960 None:intergenic 20.0%
!! TCTAACTATTTAATTGGTAT+CGG + Chr7:77429608-77429627 None:intergenic 20.0%
!! TGGTATGAAGAAAAAAAAAT+CGG - Chr7:77434314-77434333 MsG0780040432.01.T01:intron 20.0%
!! TGTATATACTAGTAGTATAT+AGG + Chr7:77429651-77429670 None:intergenic 20.0%
!! TTTAAATATAATACATTCCG+AGG - Chr7:77431742-77431761 MsG0780040432.01.T01:intron 20.0%
!!! AACAAGGATTTTGATATATT+TGG - Chr7:77430571-77430590 MsG0780040432.01.T01:intron 20.0%
!!! ACAAGGATTTTGATATATTT+GGG - Chr7:77430572-77430591 MsG0780040432.01.T01:intron 20.0%
!!! ACATTTTTGCTATAGATTTT+CGG + Chr7:77434389-77434408 None:intergenic 20.0%
!!! ATTTGGAATTAATAACCAAT+TGG + Chr7:77432162-77432181 None:intergenic 20.0%
!!! CATTGATTTCATGAATAATA+TGG - Chr7:77433071-77433090 MsG0780040432.01.T01:CDS 20.0%
!!! TCATTTATAAAGTTTTCAAG+AGG - Chr7:77434583-77434602 MsG0780040432.01.T01:intron 20.0%
!!! TGTTCTAAAAATATATTTCC+AGG - Chr7:77435933-77435952 MsG0780040432.01.T01:CDS 20.0%
!!! TTTATTTTATTTTAGCATCG+TGG - Chr7:77434458-77434477 MsG0780040432.01.T01:intron 20.0%
! AAAAGTAGAATTGTTGACAA+AGG - Chr7:77432107-77432126 MsG0780040432.01.T01:CDS 25.0%
! AACTTGAATCAATCAAATGT+TGG + Chr7:77434239-77434258 None:intergenic 25.0%
! AAGCATAGAGAATATTGTAA+AGG + Chr7:77433523-77433542 None:intergenic 25.0%
! AATGGTATCTACATTTAATG+TGG - Chr7:77433496-77433515 MsG0780040432.01.T01:intron 25.0%
! ACTGTGAACATTATATTCAA+AGG - Chr7:77434748-77434767 MsG0780040432.01.T01:intron 25.0%
! AGATACCATTTAAATGTTTG+AGG + Chr7:77433486-77433505 None:intergenic 25.0%
! AGCATAGAGAATATTGTAAA+GGG + Chr7:77433522-77433541 None:intergenic 25.0%
! ATAAAGGGAGAAAAAATGAA+GGG + Chr7:77435018-77435037 None:intergenic 25.0%
! ATAACTTAAACTTCAATTCC+AGG + Chr7:77435056-77435075 None:intergenic 25.0%
! ATGAAAAATGTTGTCAACAT+TGG + Chr7:77433009-77433028 None:intergenic 25.0%
! ATTTAACAACTTGATTGAAG+AGG - Chr7:77433797-77433816 MsG0780040432.01.T01:intron 25.0%
! CATAGCATAACAAAATTTCA+TGG - Chr7:77432887-77432906 MsG0780040432.01.T01:intron 25.0%
! GAACTCAATCAAATATTCAA+AGG - Chr7:77430770-77430789 MsG0780040432.01.T01:intron 25.0%
! GATACCAATTAAATAGTTAG+AGG - Chr7:77429607-77429626 MsG0780040432.01.T01:intron 25.0%
! GATACCATTTAAATGTTTGA+GGG + Chr7:77433485-77433504 None:intergenic 25.0%
! GATGAAGATAATGTAGTATA+TGG + Chr7:77429957-77429976 None:intergenic 25.0%
! TATAAAGGGAGAAAAAATGA+AGG + Chr7:77435019-77435038 None:intergenic 25.0%
! TATAATAGGTACTATACTGA+AGG + Chr7:77435537-77435556 None:intergenic 25.0%
! TATAGCAAAAATGTTAGAGT+TGG - Chr7:77434395-77434414 MsG0780040432.01.T01:intron 25.0%
! TATTTGATTGAGTTCTTCAA+TGG + Chr7:77430765-77430784 None:intergenic 25.0%
! TCAATATTTGTGATATAGAG+AGG - Chr7:77432738-77432757 MsG0780040432.01.T01:CDS 25.0%
! TTAAGCTTAAATATGCAAAC+CGG - Chr7:77434970-77434989 MsG0780040432.01.T01:intron 25.0%
! TTATTTGATAAAGGAGATGA+AGG - Chr7:77429385-77429404 MsG0780040432.01.T01:intron 25.0%
! TTCATCCCAAATTCATAATA+TGG - Chr7:77429971-77429990 MsG0780040432.01.T01:intron 25.0%
! TTCTTGTAGTGTATTGTATT+GGG + Chr7:77430339-77430358 None:intergenic 25.0%
! TTGAAGATAAAAGTTGTAGA+TGG - Chr7:77434780-77434799 MsG0780040432.01.T01:CDS 25.0%
! TTTATGCAAGAAAAATGTAC+AGG - Chr7:77434908-77434927 MsG0780040432.01.T01:intron 25.0%
! TTTCATCAAAAAATCATCTG+TGG - Chr7:77433023-77433042 MsG0780040432.01.T01:intron 25.0%
! TTTCTTGTAGTGTATTGTAT+TGG + Chr7:77430340-77430359 None:intergenic 25.0%
! TTTGTGAGAATATTCTTTAG+AGG + Chr7:77435761-77435780 None:intergenic 25.0%
!! ACAACTTTTATCTTCAATTG+TGG + Chr7:77434777-77434796 None:intergenic 25.0%
!! ACTTTGGATTTTGTATTTGT+AGG - Chr7:77431077-77431096 MsG0780040432.01.T01:intron 25.0%
!! ATTTTGCATTGTAATCTAAC+AGG - Chr7:77433676-77433695 MsG0780040432.01.T01:intron 25.0%
!! CAACTTTTATCTTCAATTGT+GGG + Chr7:77434776-77434795 None:intergenic 25.0%
!! GATAACGAGAGTATAAATAA+TGG + Chr7:77432555-77432574 None:intergenic 25.0%
!! TAGTCTTACTACACTTAATA+TGG - Chr7:77434019-77434038 MsG0780040432.01.T01:intron 25.0%
!! TATAGGCTAAATTACCTTTT+TGG + Chr7:77429634-77429653 None:intergenic 25.0%
!! TATGTTTCTTTTTGTTGACA+AGG - Chr7:77432698-77432717 MsG0780040432.01.T01:CDS 25.0%
!! TGATTTGAAATACCTTTGAT+GGG - Chr7:77434701-77434720 MsG0780040432.01.T01:intron 25.0%
!! TTGATTTGAAATACCTTTGA+TGG - Chr7:77434700-77434719 MsG0780040432.01.T01:intron 25.0%
!!! CATACTTGTGTTTTAAATCT+TGG + Chr7:77433624-77433643 None:intergenic 25.0%
!!! CATGAAATTTTGTTATGCTA+TGG + Chr7:77432889-77432908 None:intergenic 25.0%
!!! CGTTTTTTGAATAAATCTGA+CGG - Chr7:77429511-77429530 MsG0780040432.01.T01:CDS 25.0%
!!! GGAATGTGATTTTTAGATTT+AGG - Chr7:77429332-77429351 MsG0780040432.01.T01:three_prime_UTR 25.0%
!!! GTTTATAGGTCATAGTTTTA+CGG - Chr7:77430154-77430173 MsG0780040432.01.T01:intron 25.0%
!!! TATATACAACGTTTTTTGAG+AGG - Chr7:77429663-77429682 MsG0780040432.01.T01:intron 25.0%
!!! TATATCAATTTTTCAGAGAG+TGG + Chr7:77430092-77430111 None:intergenic 25.0%
!!! TTGATTGATTCAAGTTGTAA+GGG - Chr7:77434243-77434262 MsG0780040432.01.T01:intron 25.0%
!!! TTTATAGGTTGTACTTTTTC+TGG - Chr7:77431017-77431036 MsG0780040432.01.T01:intron 25.0%
!!! TTTGATTGATTCAAGTTGTA+AGG - Chr7:77434242-77434261 MsG0780040432.01.T01:intron 25.0%
AAAAATGTTGGATCAACCTT+TGG + Chr7:77435187-77435206 None:intergenic 30.0%
AAAATGCTAGATCTAGATCT+TGG - Chr7:77432782-77432801 MsG0780040432.01.T01:CDS 30.0%
AAAGAGTTCATACAAGTGAT+AGG + Chr7:77432610-77432629 None:intergenic 30.0%
AAATAGTTAGAGGACCAAAA+AGG - Chr7:77429617-77429636 MsG0780040432.01.T01:intron 30.0%
AAATTTCATGAGTGGCATTA+AGG - Chr7:77434516-77434535 MsG0780040432.01.T01:intron 30.0%
AATTATGAGCCTAACAGATA+TGG - Chr7:77435318-77435337 MsG0780040432.01.T01:intron 30.0%
AATTTCATGAGTGGCATTAA+GGG - Chr7:77434517-77434536 MsG0780040432.01.T01:intron 30.0%
ACAGCATATACTCTTTCATA+TGG - Chr7:77430302-77430321 MsG0780040432.01.T01:CDS 30.0%
AGAGAGGTGAAAAGAAAAAT+AGG - Chr7:77432754-77432773 MsG0780040432.01.T01:CDS 30.0%
AGCATTCTGACCAATATAAA+GGG + Chr7:77432038-77432057 None:intergenic 30.0%
AGGATACATGATATTTCCTA+TGG - Chr7:77432423-77432442 MsG0780040432.01.T01:intron 30.0%
CAATAGTATAAAAACTCCAC+TGG + Chr7:77432511-77432530 None:intergenic 30.0%
CAGCATATACTCTTTCATAT+GGG - Chr7:77430303-77430322 MsG0780040432.01.T01:CDS 30.0%
CATTACATCACACTAAATTC+AGG - Chr7:77433271-77433290 MsG0780040432.01.T01:intron 30.0%
CCAATGTATGACTACATTTA+TGG - Chr7:77433315-77433334 MsG0780040432.01.T01:intron 30.0%
CCATAAATGTAGTCATACAT+TGG + Chr7:77433318-77433337 None:intergenic 30.0%
CTAGTGAATAGTAAGATGTA+CGG + Chr7:77429812-77429831 None:intergenic 30.0%
GCTTGTTTGAATTGAATATG+CGG - Chr7:77434073-77434092 MsG0780040432.01.T01:intron 30.0%
GGAAGCCATATTATGAATTT+GGG + Chr7:77429979-77429998 None:intergenic 30.0%
GTAACATTGTATACTTACGA+TGG + Chr7:77433171-77433190 None:intergenic 30.0%
GTAATGCAGTGAACAAAATT+TGG + Chr7:77432393-77432412 None:intergenic 30.0%
GTATGACTACATTTATGGTA+CGG - Chr7:77433320-77433339 MsG0780040432.01.T01:intron 30.0%
GTATGAGAGATACTTCAATT+GGG + Chr7:77433145-77433164 None:intergenic 30.0%
TAGCATTCTGACCAATATAA+AGG + Chr7:77432039-77432058 None:intergenic 30.0%
TATGAGAGATACTTCAATTG+GGG + Chr7:77433144-77433163 None:intergenic 30.0%
TATTCTCTATGCTTATGACT+TGG - Chr7:77433529-77433548 MsG0780040432.01.T01:intron 30.0%
TCACCAAATCATACAACAAA+AGG + Chr7:77430805-77430824 None:intergenic 30.0%
TCCATCTATCAATTACGTTT+AGG - Chr7:77433438-77433457 MsG0780040432.01.T01:intron 30.0%
TCTCATATGTCCCTTTATAT+TGG - Chr7:77432025-77432044 MsG0780040432.01.T01:intron 30.0%
TGGAAGCCATATTATGAATT+TGG + Chr7:77429980-77429999 None:intergenic 30.0%
TGGTCCTCTAACTATTTAAT+TGG + Chr7:77429614-77429633 None:intergenic 30.0%
TGTATGAGAGATACTTCAAT+TGG + Chr7:77433146-77433165 None:intergenic 30.0%
TGTGAATTCATGAATGTAGT+AGG + Chr7:77435479-77435498 None:intergenic 30.0%
TTCATCAACTAAATGCAATC+TGG + Chr7:77429788-77429807 None:intergenic 30.0%
TTCTCACAAATTAACCAAGT+AGG - Chr7:77435771-77435790 MsG0780040432.01.T01:intron 30.0%
TTGCAACTTGAGATTCTTAA+AGG + Chr7:77433589-77433608 None:intergenic 30.0%
TTGTAGAGTCTAGTAAATGT+GGG - Chr7:77434143-77434162 MsG0780040432.01.T01:intron 30.0%
TTTGAATAAATCTGACGGAA+AGG - Chr7:77429516-77429535 MsG0780040432.01.T01:CDS 30.0%
TTTGTAGAGTCTAGTAAATG+TGG - Chr7:77434142-77434161 MsG0780040432.01.T01:intron 30.0%
TTTGTATGTAGAGAGTAAAC+AGG + Chr7:77432654-77432673 None:intergenic 30.0%
! AAACAATACCACGTCAATTT+TGG + Chr7:77434125-77434144 None:intergenic 30.0%
! AAATGTTTTGCTTTGCCTTT+TGG + Chr7:77433781-77433800 None:intergenic 30.0%
! ATATGAAAGAGTATATGCTG+TGG + Chr7:77430303-77430322 None:intergenic 30.0%
! ATTTTCCTCGGTATTTAACT+TGG + Chr7:77430503-77430522 None:intergenic 30.0%
! CAATCTTTTCGCATTTTCTT+TGG + Chr7:77435425-77435444 None:intergenic 30.0%
! CAGTGGAGTTTTTATACTAT+TGG - Chr7:77432509-77432528 MsG0780040432.01.T01:intron 30.0%
! GGTATGAATAATGATCCTTT+TGG + Chr7:77435386-77435405 None:intergenic 30.0%
! TTTTCTTCATACCAAGAGTT+AGG + Chr7:77434308-77434327 None:intergenic 30.0%
!! AAGTCTAGGACTTTTTAATC+AGG - Chr7:77433857-77433876 MsG0780040432.01.T01:intron 30.0%
!! CATCCTTTTGTTGTATGATT+TGG - Chr7:77430799-77430818 MsG0780040432.01.T01:intron 30.0%
!! CTATTTAATTGGTATCGGTT+TGG + Chr7:77429603-77429622 None:intergenic 30.0%
!! GCTTTTTAGCAGGTTTTTAT+AGG - Chr7:77431002-77431021 MsG0780040432.01.T01:intron 30.0%
!! GTTGTATGATTTGGTGATTA+GGG - Chr7:77430808-77430827 MsG0780040432.01.T01:intron 30.0%
!! GTTTTCAAGAGTGATTGAAA+TGG + Chr7:77429844-77429863 None:intergenic 30.0%
!! TGTTGTATGATTTGGTGATT+AGG - Chr7:77430807-77430826 MsG0780040432.01.T01:intron 30.0%
!! TGTTTTTACCCTAGTAAAGT+TGG - Chr7:77429879-77429898 MsG0780040432.01.T01:intron 30.0%
!! TTTTTGCTATAGATTTTCGG+TGG + Chr7:77434386-77434405 None:intergenic 30.0%
!!! TCTCATTTAGCCTTTTTTCT+AGG - Chr7:77431529-77431548 MsG0780040432.01.T01:intron 30.0%
!!! TTTGGCGCTTTTTTGAAATT+TGG - Chr7:77431614-77431633 MsG0780040432.01.T01:intron 30.0%
AAAACCTGCTAAAAAGCCAA+AGG + Chr7:77430999-77431018 None:intergenic 35.0%
AAACTAGTGTTCCAGTTACT+GGG - Chr7:77429271-77429290 MsG0780040432.01.T01:three_prime_UTR 35.0%
AAAGAGCTTGACATGTCAAA+AGG - Chr7:77435133-77435152 MsG0780040432.01.T01:intron 35.0%
AACCAAGTCATGTCTATCTT+TGG - Chr7:77431214-77431233 MsG0780040432.01.T01:intron 35.0%
AAGCACTTGAATTGTTCCTT+TGG + Chr7:77434844-77434863 None:intergenic 35.0%
AAGTATGAGAAGAGCTTCTT+AGG + Chr7:77433120-77433139 None:intergenic 35.0%
AAGTCGATAGAGAAACCAAT+TGG - Chr7:77432144-77432163 MsG0780040432.01.T01:CDS 35.0%
AGAGTTCTTCAATTGTGAGA+AGG + Chr7:77430703-77430722 None:intergenic 35.0%
AGCACTTGAATTGTTCCTTT+GGG + Chr7:77434843-77434862 None:intergenic 35.0%
ATAGGTTATCGAAACGTGAA+AGG - Chr7:77435875-77435894 MsG0780040432.01.T01:intron 35.0%
ATGAACATTCCATCCTTCTA+AGG + Chr7:77435672-77435691 None:intergenic 35.0%
ATGGTTTCTCGCTGAAATTA+AGG - Chr7:77430395-77430414 MsG0780040432.01.T01:CDS 35.0%
ATTCAAAAAACGTTAGGGTG+TGG + Chr7:77429503-77429522 None:intergenic 35.0%
CAAAAATTTCCGAGGAACAA+TGG - Chr7:77430376-77430395 MsG0780040432.01.T01:CDS 35.0%
CCAACCCTCAAACATTTAAA+TGG - Chr7:77433478-77433497 MsG0780040432.01.T01:intron 35.0%
CCATTTAAATGTTTGAGGGT+TGG + Chr7:77433481-77433500 None:intergenic 35.0%
GAATGCTACACAATCAGATT+TGG - Chr7:77432051-77432070 MsG0780040432.01.T01:CDS 35.0%
GAGGTTTAATACCTAACTCT+TGG - Chr7:77434294-77434313 MsG0780040432.01.T01:intron 35.0%
GATGTAATGAGTGAAACCTA+TGG + Chr7:77433260-77433279 None:intergenic 35.0%
GCAGGTAGTTGTGTTATATA+AGG - Chr7:77435102-77435121 MsG0780040432.01.T01:intron 35.0%
GCCTAAACGTAATTGATAGA+TGG + Chr7:77433442-77433461 None:intergenic 35.0%
GGAATAATTCATGCCTTAGA+AGG - Chr7:77435656-77435675 MsG0780040432.01.T01:intron 35.0%
GGTAAAAACATGATTAACCG+CGG + Chr7:77429869-77429888 None:intergenic 35.0%
GTACGTAGTATTTCTCCAAA+AGG - Chr7:77433763-77433782 MsG0780040432.01.T01:intron 35.0%
GTAGTAAGACTAAGACTTTG+TGG + Chr7:77434011-77434030 None:intergenic 35.0%
TAACATTGCGAACAAAAGCT+TGG + Chr7:77431393-77431412 None:intergenic 35.0%
TAATCATTGCTGGTGTATAG+TGG + Chr7:77435454-77435473 None:intergenic 35.0%
TAATTCATGCCTTAGAAGGA+TGG - Chr7:77435660-77435679 MsG0780040432.01.T01:intron 35.0%
TAGTTAGTGTCCATAACCAA+GGG + Chr7:77430252-77430271 None:intergenic 35.0%
TATATACGGCATGCATGAAT+TGG + Chr7:77429927-77429946 None:intergenic 35.0%
TATGTATGTACCCTTGGTTA+TGG - Chr7:77430239-77430258 MsG0780040432.01.T01:intron 35.0%
TCATGTCCTGGAAAAATAGT+TGG + Chr7:77431914-77431933 None:intergenic 35.0%
TCCAACTAACCATATCTGTT+AGG + Chr7:77435330-77435349 None:intergenic 35.0%
TGACATGTCAAAAGGAAACT+TGG - Chr7:77435141-77435160 MsG0780040432.01.T01:intron 35.0%
TGCAGGATTATTCTGTACTT+TGG - Chr7:77431061-77431080 MsG0780040432.01.T01:intron 35.0%
TGTTTGAATTGAATATGCGG+CGG - Chr7:77434076-77434095 MsG0780040432.01.T01:intron 35.0%
TTAGTTAGTGTCCATAACCA+AGG + Chr7:77430253-77430272 None:intergenic 35.0%
TTCAAGAGTGATTGAAATGG+TGG + Chr7:77429841-77429860 None:intergenic 35.0%
TTCCATCGCGCATATATAAA+GGG + Chr7:77435033-77435052 None:intergenic 35.0%
TTCTCCATTCAATACACCAA+AGG - Chr7:77435168-77435187 MsG0780040432.01.T01:intron 35.0%
TTTAAATGTTTGAGGGTTGG+AGG + Chr7:77433478-77433497 None:intergenic 35.0%
TTTATGGATGAATTGCAAGC+AGG - Chr7:77435084-77435103 MsG0780040432.01.T01:intron 35.0%
TTTGGAGGGAAATGAGAAAA+TGG + Chr7:77435407-77435426 None:intergenic 35.0%
! ACTCTTTCATATGGGTTGAA+AGG - Chr7:77430311-77430330 MsG0780040432.01.T01:CDS 35.0%
! AGAATCTCAAGTTGCAATGT+TGG - Chr7:77433592-77433611 MsG0780040432.01.T01:intron 35.0%
! ATCAAATGTTGGTGAGATGA+TGG + Chr7:77434228-77434247 None:intergenic 35.0%
! ATGCTTATGACTTGGATTTG+TGG - Chr7:77433537-77433556 MsG0780040432.01.T01:intron 35.0%
! ATGGTTAGTTGGAGATGAAT+GGG - Chr7:77435337-77435356 MsG0780040432.01.T01:intron 35.0%
! ATTTTCTCCTTGGTTTCCAT+AGG - Chr7:77433241-77433260 MsG0780040432.01.T01:intron 35.0%
! CATTGTTCCTCGGAAATTTT+TGG + Chr7:77430378-77430397 None:intergenic 35.0%
! CTCTTTCATATGGGTTGAAA+GGG - Chr7:77430312-77430331 MsG0780040432.01.T01:CDS 35.0%
! CTTGCATAAAGCATTAGCAA+TGG + Chr7:77434898-77434917 None:intergenic 35.0%
! CTTTTCCAAGTTAAATACCG+AGG - Chr7:77430495-77430514 MsG0780040432.01.T01:intron 35.0%
! CTTTTCGCATTTTCTTTGGA+GGG + Chr7:77435421-77435440 None:intergenic 35.0%
! TAATGACAACATGTTTTCCG+AGG + Chr7:77430529-77430548 None:intergenic 35.0%
! TATGGTTAGTTGGAGATGAA+TGG - Chr7:77435336-77435355 MsG0780040432.01.T01:intron 35.0%
! TCAACCTTTGGTGTATTGAA+TGG + Chr7:77435175-77435194 None:intergenic 35.0%
! TCTTTTCAAAGCGTGTAACA+AGG - Chr7:77430555-77430574 MsG0780040432.01.T01:intron 35.0%
! TCTTTTCGCATTTTCTTTGG+AGG + Chr7:77435422-77435441 None:intergenic 35.0%
! TGCTTATGACTTGGATTTGT+GGG - Chr7:77433538-77433557 MsG0780040432.01.T01:intron 35.0%
!! AAGAAAGCACTAAAATTCCG+AGG + Chr7:77431996-77432015 None:intergenic 35.0%
!! GGAATTTTAGTGCTTTCTTG+TGG - Chr7:77431997-77432016 MsG0780040432.01.T01:intron 35.0%
!! GGAGTTGCTTTCTAAAACAA+AGG + Chr7:77433568-77433587 None:intergenic 35.0%
!! TATCGACTTGTTCAAATTCG+AGG + Chr7:77432133-77432152 None:intergenic 35.0%
!! TCTTATTCGAGTTGCTTAAG+CGG + Chr7:77434276-77434295 None:intergenic 35.0%
!! TTGCAACCAACTATTTTTCC+AGG - Chr7:77431905-77431924 MsG0780040432.01.T01:CDS 35.0%
!!! AGGTTGTACTTTTTCTGGTT+CGG - Chr7:77431022-77431041 MsG0780040432.01.T01:intron 35.0%
!!! TACACGTGTCATTTTAGCAT+TGG + Chr7:77429480-77429499 None:intergenic 35.0%
AAAGAATCAAGCTGAGTTGC+TGG - Chr7:77430888-77430907 MsG0780040432.01.T01:intron 40.0%
AAATACCGAGGAAATTTCCG+AGG + Chr7:77431882-77431901 None:intergenic 40.0%
AAGTTCCTCGGAAATTTCCT+CGG - Chr7:77431874-77431893 MsG0780040432.01.T01:CDS 40.0%
ACAATTCAAGTGCTTCTTCG+AGG - Chr7:77434849-77434868 MsG0780040432.01.T01:CDS 40.0%
ACAGCAGAATAGCAGAAATC+TGG - Chr7:77429749-77429768 MsG0780040432.01.T01:intron 40.0%
AGAAGGAAAATTGCCGAGTT+TGG + Chr7:77430686-77430705 None:intergenic 40.0%
AGCCAAAGATAGACATGACT+TGG + Chr7:77431219-77431238 None:intergenic 40.0%
AGTAGGTTATCGAACGTGAA+AGG - Chr7:77435788-77435807 MsG0780040432.01.T01:intron 40.0%
AGTGAAACCTATGGAAACCA+AGG + Chr7:77433251-77433270 None:intergenic 40.0%
AGTTCGTGATTCTAATCCCA+TGG - Chr7:77430272-77430291 MsG0780040432.01.T01:intron 40.0%
ATACCGAGGAAAAAGTTCCT+CGG + Chr7:77430425-77430444 None:intergenic 40.0%
ATACCGAGGAAAATGTTCCT+CGG - Chr7:77430509-77430528 MsG0780040432.01.T01:intron 40.0%
ATCACTCTTGAAAACAACCG+CGG - Chr7:77429849-77429868 MsG0780040432.01.T01:intron 40.0%
ATCGAAACGTGAAAGGTCAT+CGG - Chr7:77435882-77435901 MsG0780040432.01.T01:intron 40.0%
ATGAGTTCCTCGGAAAAAGT+TGG - Chr7:77431930-77431949 MsG0780040432.01.T01:CDS 40.0%
ATTCCGACCAAAAATTTCCG+AGG - Chr7:77430368-77430387 MsG0780040432.01.T01:CDS 40.0%
ATTCCGAGGACATATTTCCT+CGG - Chr7:77431845-77431864 MsG0780040432.01.T01:CDS 40.0%
ATTGTGGAGGCTGAGTTAAA+TGG - Chr7:77433822-77433841 MsG0780040432.01.T01:intron 40.0%
CAAGAAGAGTAATGAGTGCA+TGG - Chr7:77435625-77435644 MsG0780040432.01.T01:intron 40.0%
CATAATATGGCTTCCAAACC+AGG - Chr7:77429984-77430003 MsG0780040432.01.T01:CDS 40.0%
CATGAATTCACACTCTTGTG+AGG - Chr7:77435487-77435506 MsG0780040432.01.T01:intron 40.0%
CATGCACTCATTACTCTTCT+TGG + Chr7:77435627-77435646 None:intergenic 40.0%
CTTACAGCAATATTGCATGC+TGG - Chr7:77432484-77432503 MsG0780040432.01.T01:intron 40.0%
CTTGATTGAAGAGGCAATTG+TGG - Chr7:77433806-77433825 MsG0780040432.01.T01:intron 40.0%
GAAAATCGTCCAAATCTCCT+CGG + Chr7:77431960-77431979 None:intergenic 40.0%
GAAACTAGTGTTCCAGTTAC+TGG - Chr7:77429270-77429289 MsG0780040432.01.T01:three_prime_UTR 40.0%
GCCTAACAGATATGGTTAGT+TGG - Chr7:77435326-77435345 MsG0780040432.01.T01:intron 40.0%
GCTCAGTGACAATTGATGAA+TGG + Chr7:77432588-77432607 None:intergenic 40.0%
GCTGAAATTAAGGATTTCCG+AGG - Chr7:77430405-77430424 MsG0780040432.01.T01:CDS 40.0%
GCTTAAGCAACTCGAATAAG+AGG - Chr7:77434275-77434294 MsG0780040432.01.T01:intron 40.0%
GGATGGAATGTTCATGAATG+TGG - Chr7:77435677-77435696 MsG0780040432.01.T01:intron 40.0%
GTAGTAGGAGTAATCATTGC+TGG + Chr7:77435464-77435483 None:intergenic 40.0%
GTCTAGTAAATGTGGGACAT+TGG - Chr7:77434150-77434169 MsG0780040432.01.T01:intron 40.0%
GTGATTCTAATCCCATGGAT+TGG - Chr7:77430277-77430296 MsG0780040432.01.T01:intron 40.0%
GTGTTGAACAACATTCCCAA+AGG - Chr7:77434825-77434844 MsG0780040432.01.T01:CDS 40.0%
GTGTTGTATGTATGTACCCT+TGG - Chr7:77430233-77430252 MsG0780040432.01.T01:intron 40.0%
GTTCCATCGCGCATATATAA+AGG + Chr7:77435034-77435053 None:intergenic 40.0%
GTTTGAATTGAATATGCGGC+GGG - Chr7:77434077-77434096 MsG0780040432.01.T01:intron 40.0%
TCAACACAATTGCAGCAGTT+AGG + Chr7:77434812-77434831 None:intergenic 40.0%
TCACGCTATCAAACTGCTAA+AGG - Chr7:77432083-77432102 MsG0780040432.01.T01:CDS 40.0%
TCATCTGTGGTTGCACTATA+TGG - Chr7:77433036-77433055 MsG0780040432.01.T01:intron 40.0%
TCCTCGGAATTAAGATGTGA+CGG + Chr7:77431835-77431854 None:intergenic 40.0%
TCGGAAATTTCCTCGGTATT+TGG - Chr7:77431881-77431900 MsG0780040432.01.T01:CDS 40.0%
TTAAGTGACAGTGGTTCCTT+TGG - Chr7:77430980-77430999 MsG0780040432.01.T01:intron 40.0%
TTATCGAACGTGAAAGGTCA+TGG - Chr7:77435794-77435813 MsG0780040432.01.T01:intron 40.0%
TTCACGTTCGATAACCTACT+TGG + Chr7:77435788-77435807 None:intergenic 40.0%
TTCGCTTGTTTAAGTGACAG+TGG - Chr7:77430971-77430990 MsG0780040432.01.T01:intron 40.0%
TTTCCGAGGAAATATGTCCT+CGG + Chr7:77431851-77431870 None:intergenic 40.0%
TTTCCTTTGCTTGTTCTTGC+TGG - Chr7:77430926-77430945 MsG0780040432.01.T01:intron 40.0%
TTTGGTTACTGAGGAGGATT+TGG + Chr7:77430728-77430747 None:intergenic 40.0%
! GACTGTTTTCTTGTGGCTAT+TGG - Chr7:77430948-77430967 MsG0780040432.01.T01:intron 40.0%
! GCTTAGCACTGAGAAAGTAT+GGG - Chr7:77435709-77435728 MsG0780040432.01.T01:intron 40.0%
! TGAATATTGATGATCTGCGC+AGG + Chr7:77429710-77429729 None:intergenic 40.0%
! TGCTTAGCACTGAGAAAGTA+TGG - Chr7:77435708-77435727 MsG0780040432.01.T01:intron 40.0%
! TTTCCGAGGAACATTTTCCT+CGG + Chr7:77430515-77430534 None:intergenic 40.0%
! TTTCGAGGAATTTTGTGCCT+CGG - Chr7:77431976-77431995 MsG0780040432.01.T01:intron 40.0%
!! GAGCAAATGAAAGCACCAAA+AGG - Chr7:77435368-77435387 MsG0780040432.01.T01:intron 40.0%
!! GTGAGATGATGGAGTTATGA+AGG + Chr7:77434217-77434236 None:intergenic 40.0%
!! GTTAGAGTTGGTAGCTCTAT+TGG - Chr7:77434407-77434426 MsG0780040432.01.T01:intron 40.0%
!! TTTCCGAGGAACTTTTTCCT+CGG - Chr7:77430419-77430438 MsG0780040432.01.T01:CDS 40.0%
!!! GCTGTATGTTGTTTTGTTGC+AGG - Chr7:77431044-77431063 MsG0780040432.01.T01:intron 40.0%
!!! GTTCCTCGGAAATTTTTGGT+CGG + Chr7:77430374-77430393 None:intergenic 40.0%
AAACTCCCAAGAGGTTTCCA+AGG + Chr7:77430026-77430045 None:intergenic 45.0%
AACCAGGCATCCTTACAAAC+TGG - Chr7:77430000-77430019 MsG0780040432.01.T01:CDS 45.0%
AATATTGCATGCTGGACCAG+TGG - Chr7:77432492-77432511 MsG0780040432.01.T01:intron 45.0%
AATCCGACAAACCCAGTAAC+TGG + Chr7:77429285-77429304 None:intergenic 45.0%
ACCGTCACATCTTAATTCCG+AGG - Chr7:77431831-77431850 MsG0780040432.01.T01:CDS 45.0%
ACTGGGTTTGTCGGATTTGA+AGG - Chr7:77429288-77429307 MsG0780040432.01.T01:three_prime_UTR 45.0%
ACTTCTATGTCAGCCACAAC+AGG - Chr7:77431790-77431809 MsG0780040432.01.T01:intron 45.0%
AGAACCTTGAAACTCCCAAG+AGG + Chr7:77430035-77430054 None:intergenic 45.0%
AGAAGTGACTAGCATTTCCG+AGG + Chr7:77431776-77431795 None:intergenic 45.0%
AGCCTCATTGATGAGACCAA+AGG - Chr7:77433371-77433390 MsG0780040432.01.T01:intron 45.0%
AGCGAGAAACCATTGTTCCT+CGG + Chr7:77430388-77430407 None:intergenic 45.0%
AGTCCAGCAAGAACAAGCAA+AGG + Chr7:77430932-77430951 None:intergenic 45.0%
ATATGCTGTGGCCAATCCAT+GGG + Chr7:77430291-77430310 None:intergenic 45.0%
ATGCCAAGTGCTCAGCAAAT+GGG + Chr7:77432966-77432985 None:intergenic 45.0%
ATTCCGAGGACAAAGTTCCT+CGG - Chr7:77431756-77431775 MsG0780040432.01.T01:intron 45.0%
ATTCTGACATGGACATACCG+AGG + Chr7:77430439-77430458 None:intergenic 45.0%
CAGGAACGTGACAAAGTTAG+AGG - Chr7:77429547-77429566 MsG0780040432.01.T01:CDS 45.0%
CATGGTAAGTTAGAGGCCAT+AGG + Chr7:77432442-77432461 None:intergenic 45.0%
CCTCGGAAACAAAAGTTCCT+CGG - Chr7:77431862-77431881 MsG0780040432.01.T01:CDS 45.0%
CTAAATGCAATCTGGTCCAG+AGG + Chr7:77429780-77429799 None:intergenic 45.0%
CTATGGCCTCTAACTTACCA+TGG - Chr7:77432440-77432459 MsG0780040432.01.T01:intron 45.0%
CTCACTCACAGAACCAAACT+CGG - Chr7:77430670-77430689 MsG0780040432.01.T01:intron 45.0%
CTCCCTTTATATATGCGCGA+TGG - Chr7:77435028-77435047 MsG0780040432.01.T01:intron 45.0%
CTCCTTTGGTCTCATCAATG+AGG + Chr7:77433376-77433395 None:intergenic 45.0%
CTGGGTTTGTCGGATTTGAA+GGG - Chr7:77429289-77429308 MsG0780040432.01.T01:three_prime_UTR 45.0%
GAAACCTCTTGGGAGTTTCA+AGG - Chr7:77430028-77430047 MsG0780040432.01.T01:CDS 45.0%
GACTGTGTGTGACATTTGCA+GGG - Chr7:77432363-77432382 MsG0780040432.01.T01:intron 45.0%
GATTGAAGAGGCAATTGTGG+AGG - Chr7:77433809-77433828 MsG0780040432.01.T01:intron 45.0%
GCTCTTCTTGAGGAGAAGAA+TGG - Chr7:77429246-77429265 MsG0780040432.01.T01:three_prime_UTR 45.0%
GGAGCAAAGGTGATAAGTCT+AGG - Chr7:77433843-77433862 MsG0780040432.01.T01:intron 45.0%
GGCTGAGTTAAATGGAGCAA+AGG - Chr7:77433830-77433849 MsG0780040432.01.T01:intron 45.0%
GGCTTCATATGTAGCATCTG+TGG + Chr7:77433355-77433374 None:intergenic 45.0%
GTAAATGTGGGACATTGGCA+TGG - Chr7:77434155-77434174 MsG0780040432.01.T01:intron 45.0%
GTCTCACACCAAAATTGACG+TGG - Chr7:77434114-77434133 MsG0780040432.01.T01:intron 45.0%
GTTCCAGTTACTGGGTTTGT+CGG - Chr7:77429279-77429298 MsG0780040432.01.T01:three_prime_UTR 45.0%
GTTGGTATTCCGAGGAGATT+TGG - Chr7:77431948-77431967 MsG0780040432.01.T01:intron 45.0%
GTTTCCAAGGCCAGTTTGTA+AGG + Chr7:77430013-77430032 None:intergenic 45.0%
GTTTGTAAGGATGCCTGGTT+TGG + Chr7:77430000-77430019 None:intergenic 45.0%
TATATATGCGCGATGGAACC+TGG - Chr7:77435035-77435054 MsG0780040432.01.T01:intron 45.0%
TATATGCTGTGGCCAATCCA+TGG + Chr7:77430292-77430311 None:intergenic 45.0%
TATGCCAAGTGCTCAGCAAA+TGG + Chr7:77432967-77432986 None:intergenic 45.0%
TCTCCACCATGGTAAGTTAG+AGG + Chr7:77432449-77432468 None:intergenic 45.0%
TGACTGTGTGTGACATTTGC+AGG - Chr7:77432362-77432381 MsG0780040432.01.T01:intron 45.0%
TGGGAAGCAAGCATTCGTTA+TGG - Chr7:77435728-77435747 MsG0780040432.01.T01:intron 45.0%
TGGGTTTGTCGGATTTGAAG+GGG - Chr7:77429290-77429309 MsG0780040432.01.T01:three_prime_UTR 45.0%
TGGTTGCAATCCAAATACCG+AGG + Chr7:77431894-77431913 None:intergenic 45.0%
TGTGTTAAGTGCACCACATC+TGG + Chr7:77433402-77433421 None:intergenic 45.0%
TTTCCAGGACATGAGTTCCT+CGG - Chr7:77431920-77431939 MsG0780040432.01.T01:CDS 45.0%
TTTCCGAGGAACTTTGTCCT+CGG + Chr7:77431762-77431781 None:intergenic 45.0%
! CAGAAATCTGGTTTCACCTC+TGG - Chr7:77429761-77429780 MsG0780040432.01.T01:intron 45.0%
! CTGAGTTGCTGGACTGTTTT+TGG - Chr7:77430899-77430918 MsG0780040432.01.T01:intron 45.0%
! CTTGCTGGACTGTTTTCTTG+TGG - Chr7:77430941-77430960 MsG0780040432.01.T01:intron 45.0%
! GATGTTTCTGCACCCATCAA+AGG + Chr7:77434716-77434735 None:intergenic 45.0%
! GCTGAGCACTTGGCATATTT+TGG - Chr7:77432970-77432989 MsG0780040432.01.T01:intron 45.0%
! GGAGATTTGGACGATTTTCG+AGG - Chr7:77431961-77431980 MsG0780040432.01.T01:intron 45.0%
! TTACCATGGTGGAGAACAGA+TGG - Chr7:77432454-77432473 MsG0780040432.01.T01:intron 45.0%
!! CAATTTTGGTGTGAGACAGG+AGG + Chr7:77434111-77434130 None:intergenic 45.0%
!! CGGAAAAAGTTGGTATTCCG+AGG - Chr7:77431940-77431959 MsG0780040432.01.T01:intron 45.0%
!! CGGAATACCAACTTTTTCCG+AGG + Chr7:77431940-77431959 None:intergenic 45.0%
!! CGTCAATTTTGGTGTGAGAC+AGG + Chr7:77434114-77434133 None:intergenic 45.0%
!! GGCTGACTTTGGAATTGGAA+AGG - Chr7:77429311-77429330 MsG0780040432.01.T01:three_prime_UTR 45.0%
!!! GGTTCCTTTGGCTTTTTAGC+AGG - Chr7:77430992-77431011 MsG0780040432.01.T01:intron 45.0%
!! TTAAAATATAATAAAAATGT+TGG + Chr7:77435199-77435218 None:intergenic 5.0%
!!! AATTTAATTTATGTTATAAT+AGG + Chr7:77435551-77435570 None:intergenic 5.0%
AATGAGTGCATGGCGTATGC+TGG - Chr7:77435635-77435654 MsG0780040432.01.T01:intron 50.0%
ACACCATCTGTTCTCCACCA+TGG + Chr7:77432460-77432479 None:intergenic 50.0%
ACCAAAGGAGTCACCAGATG+TGG - Chr7:77433386-77433405 MsG0780040432.01.T01:intron 50.0%
ACCACATCTGGTGACTCCTT+TGG + Chr7:77433390-77433409 None:intergenic 50.0%
AGAGAGAGAGTGAGACAGAG+AGG + Chr7:77430606-77430625 None:intergenic 50.0%
ATGGTTGTGTGACCCAGCTT+TGG + Chr7:77430746-77430765 None:intergenic 50.0%
CCTCCTCAGTAACCAAAGCT+GGG - Chr7:77430731-77430750 MsG0780040432.01.T01:intron 50.0%
CTCTCTCTCTCTCTCTCTCA+AGG - Chr7:77430628-77430647 MsG0780040432.01.T01:intron 50.0%
GAGGAGCAGAGATTCTGACA+TGG + Chr7:77430450-77430469 None:intergenic 50.0%
TCCTACCTGCAAAGTCAGTG+TGG - Chr7:77430468-77430487 MsG0780040432.01.T01:CDS 50.0%
TCCTCCTCAGTAACCAAAGC+TGG - Chr7:77430730-77430749 MsG0780040432.01.T01:intron 50.0%
TGACGGAAAGGACGAAAAGC+AGG - Chr7:77429528-77429547 MsG0780040432.01.T01:CDS 50.0%
TGGCCTCTAACTTACCATGG+TGG - Chr7:77432443-77432462 MsG0780040432.01.T01:intron 50.0%
TTTCCGAGGAACTCATGTCC+TGG + Chr7:77431926-77431945 None:intergenic 50.0%
! ACACCCATTTGCTGAGCACT+TGG - Chr7:77432960-77432979 MsG0780040432.01.T01:intron 50.0%
! ATGGTGGAGAACAGATGGTG+TGG - Chr7:77432459-77432478 MsG0780040432.01.T01:intron 50.0%
! GCATCCTTACAAACTGGCCT+TGG - Chr7:77430006-77430025 MsG0780040432.01.T01:CDS 50.0%
! GGATTTGAAGGGGCTGACTT+TGG - Chr7:77429300-77429319 MsG0780040432.01.T01:three_prime_UTR 50.0%
! TGACCCAGCTTTGGTTACTG+AGG + Chr7:77430737-77430756 None:intergenic 50.0%
!! AACTGGCCTTGGAAACCTCT+TGG - Chr7:77430017-77430036 MsG0780040432.01.T01:CDS 50.0%
!! ACACTGACTTTGCAGGTAGG+AGG + Chr7:77430469-77430488 None:intergenic 50.0%
!! ACTGGCCTTGGAAACCTCTT+GGG - Chr7:77430018-77430037 MsG0780040432.01.T01:CDS 50.0%
!! CCGAGGAACTTTTGTTTCCG+AGG + Chr7:77431865-77431884 None:intergenic 50.0%
!! GAAGGGGCTGACTTTGGAAT+TGG - Chr7:77429306-77429325 MsG0780040432.01.T01:three_prime_UTR 50.0%
GGCCAGTTTGTAAGGATGCC+TGG + Chr7:77430005-77430024 None:intergenic 55.0%
TGTGACGGTTGACACCAGAC+TGG + Chr7:77431820-77431839 None:intergenic 55.0%
! CCCAGCTTTGGTTACTGAGG+AGG + Chr7:77430734-77430753 None:intergenic 55.0%
!! GCCACACTGACTTTGCAGGT+AGG + Chr7:77430472-77430491 None:intergenic 55.0%
CCAGACTGGCGCTCCTGTTG+TGG + Chr7:77431806-77431825 None:intergenic 65.0%
!! CCACAACAGGAGCGCCAGTC+TGG - Chr7:77431803-77431822 MsG0780040432.01.T01:intron 65.0%
!! GCGCGCCACACTGACTTTGC+AGG + Chr7:77430476-77430495 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 77429237 77435982 77429237 ID=MsG0780040432.01;Name=MsG0780040432.01
Chr7 mRNA 77429237 77435982 77429237 ID=MsG0780040432.01.T01;Parent=MsG0780040432.01;Name=MsG0780040432.01.T01;_AED=0.49;_eAED=0.55;_QI=0|0.6|0.54|1|0.9|0.81|11|169|505
Chr7 exon 77429237 77429387 77429237 ID=MsG0780040432.01.T01:exon:14908;Parent=MsG0780040432.01.T01
Chr7 exon 77429417 77429604 77429417 ID=MsG0780040432.01.T01:exon:14907;Parent=MsG0780040432.01.T01
Chr7 exon 77429978 77430113 77429978 ID=MsG0780040432.01.T01:exon:14906;Parent=MsG0780040432.01.T01
Chr7 exon 77430290 77430490 77430290 ID=MsG0780040432.01.T01:exon:14905;Parent=MsG0780040432.01.T01
Chr7 exon 77431341 77431448 77431341 ID=MsG0780040432.01.T01:exon:14904;Parent=MsG0780040432.01.T01
Chr7 exon 77431812 77431956 77431812 ID=MsG0780040432.01.T01:exon:14903;Parent=MsG0780040432.01.T01
Chr7 exon 77432047 77432266 77432047 ID=MsG0780040432.01.T01:exon:14902;Parent=MsG0780040432.01.T01
Chr7 exon 77432603 77432835 77432603 ID=MsG0780040432.01.T01:exon:14901;Parent=MsG0780040432.01.T01
Chr7 exon 77433054 77433167 77433054 ID=MsG0780040432.01.T01:exon:14900;Parent=MsG0780040432.01.T01
Chr7 exon 77434779 77434913 77434779 ID=MsG0780040432.01.T01:exon:14899;Parent=MsG0780040432.01.T01
Chr7 exon 77435927 77435982 77435927 ID=MsG0780040432.01.T01:exon:14898;Parent=MsG0780040432.01.T01
Chr7 CDS 77435927 77435982 77435927 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77434779 77434913 77434779 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77433054 77433167 77433054 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77432603 77432835 77432603 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77432047 77432266 77432047 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77431812 77431956 77431812 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77431341 77431448 77431341 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77430290 77430490 77430290 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77429978 77430113 77429978 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 CDS 77429435 77429604 77429435 ID=MsG0780040432.01.T01:cds;Parent=MsG0780040432.01.T01
Chr7 three_prime_UTR 77429417 77429434 77429417 ID=MsG0780040432.01.T01:three_prime_utr;Parent=MsG0780040432.01.T01
Chr7 three_prime_UTR 77429237 77429387 77429237 ID=MsG0780040432.01.T01:three_prime_utr;Parent=MsG0780040432.01.T01
Gene Sequence

>MsG0780040432.01.T01

ATGATTAAGGCTCTTCTTGAGGAGAAGAATGGAGAAACTAGTGTTCCAGTTACTGGCATATACTCTTTCATATGGGTTGAAAGGGACCCAATACAATACACTACAAGAAAGCTTGAGTATTCCGACCAAAAATTTCCGAGGAACAATGGTTTCTCGCTGAAATTAAGGATTTCCGAGGAACTTTTTCCTCGAATGCTACACAATCAGATTTGGAGTTCTATCTCACGCTATCAAACTGCTAAAGGCAAAAGTAGAATTGTTGACAAAGGCCTCGAATTTGAACAAGTCGATAGAGAAACCAATTGGGATGACCAAATTTTGTTCACTGCATTACTATATTATATAGGATACATGATATTTCCTATGGCCTCTAACTTACCATGGTGGAGAACAGATGGTGTGGTTCTTACAGCAATATTGCATGCTGGACCAGTGGAGTTTTTATACTATTGGCTACATAGAGCACTTCATCACCATTATTTATACTCTCGTTATCATTCTCATCACCATTCATCAATTGTCACTGAGCCTATCACTTCTGTAGCACACCCATTTGCTGAGCACTTGGCATATTTTGGACTTTTTGCTATACCAATGTTGACAACATTTTTCATCAAAAAATCATCTGTGGTTGCACTATATGGCTATGTCTTTTTCATTGATTTCATGAATAATATGGGTCATTGCAACTTTGAGTTCTTTCCTAAGAAGCTCTTCTCATACTTTCCCCAATTGAAGTATCTCTCATACACACCATCGTTTCACTCATTACATCACACTAAATTCAGGACAAATTACTCACTTTTTATGCCAATGTATGACTACATTTATGGTACGGTAGATAAATCCACAGATGCTACATATGAAGCCTCATTGATGAGACCAAAGGAGTCACCAGATGTGTATTTCTCCAAAAGGCAAAGCAAAACATTTAACAACTTGATTGAAGAGGCAATTGTGGAGGCTGAGTTAAATGGAGCAAAGGTGATAAGTCTAGGACTTTTTAATCAGAAACATCAGCTGAATGCACACTGTGAACATTATATTCAAAGGTTCCCACAATTGAAGATAAAAGTTGTAGATGGAAGTAGCCTAACTGCTGCAATTGTGTTGAACAACATTCCCAAAGGAACAATTCAAGTGCTTCTTCGAGGCAAGTTTAATAAGATTGCGTTTGCCATTGCTAATGCTTTATGCAAGAAAAATGTACAGGTAGTTGTGTTATATAAGGATGAGCTTAAAGAGCTTGACATGTCAAAAGGAAACTTGGCTCTTTCTCCATTCAATACACCAAAGGTTGATCCAACATTTTTATTATATTTTAAAAATCGCCAAACAATTTTAACTAAATTGGCTTCCAAGAAGAGTAATGAGTGCATGGCGTATGCTGGAATAATTCATGCCTTAGAAGGATGGAATGTTCATGAATGTGGTGACACTATGCTTAGCACTGAGAAAGTATGGGAAGCAAGCATTCGTTATGGTTTCAAACCTCTAAAGAATATTCTCACAAATTAA
Protein sequence

>MsG0780040432.01.T01

MIKALLEEKNGETSVPVTGIYSFIWVERDPIQYTTRKLEYSDQKFPRNNGFSLKLRISEELFPRMLHNQIWSSISRYQTAKGKSRIVDKGLEFEQVDRETNWDDQILFTALLYYIGYMIFPMASNLPWWRTDGVVLTAILHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTEPITSVAHPFAEHLAYFGLFAIPMLTTFFIKKSSVVALYGYVFFIDFMNNMGHCNFEFFPKKLFSYFPQLKYLSYTPSFHSLHHTKFRTNYSLFMPMYDYIYGTVDKSTDATYEASLMRPKESPDVYFSKRQSKTFNNLIEEAIVEAELNGAKVISLGLFNQKHQLNAHCEHYIQRFPQLKIKVVDGSSLTAAIVLNNIPKGTIQVLLRGKFNKIAFAIANALCKKNVQVVVLYKDELKELDMSKGNLALSPFNTPKVDPTFLLYFKNRQTILTKLASKKSNECMAYAGIIHALEGWNVHECGDTMLSTEKVWEASIRYGFKPLKNILTN*