Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040287.01.T01 | XP_003624784.1 | 97.059 | 204 | 6 | 0 | 15 | 218 | 197 | 400 | 8.55E-138 | 402 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040287.01.T01 | Q8W488 | 62.5 | 200 | 73 | 1 | 15 | 214 | 290 | 487 | 4.48E-85 | 263 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040287.01.T01 | G7L2P4 | 97.059 | 204 | 6 | 0 | 15 | 218 | 197 | 400 | 4.08e-138 | 402 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048357.01 | MsG0780040287.01 | 0.803859 | 2.850599e-49 | 1.448119e-46 |
MsG0080048787.01 | MsG0780040287.01 | 0.803445 | 3.474162e-49 | 1.746156e-46 |
MsG0180000210.01 | MsG0780040287.01 | 0.816526 | 5.284043e-52 | 3.753225e-49 |
MsG0180000404.01 | MsG0780040287.01 | 0.821798 | 3.333262e-53 | 2.739520e-50 |
MsG0180000777.01 | MsG0780040287.01 | 0.822853 | 1.896688e-53 | 1.606423e-50 |
MsG0180001886.01 | MsG0780040287.01 | 0.815646 | 8.309926e-52 | 5.762421e-49 |
MsG0180003572.01 | MsG0780040287.01 | 0.820775 | 5.739020e-53 | 4.583575e-50 |
MsG0180003741.01 | MsG0780040287.01 | 0.874090 | 8.859674e-68 | 3.935965e-64 |
MsG0180004389.01 | MsG0780040287.01 | 0.819755 | 9.833523e-53 | 7.634495e-50 |
MsG0180004465.01 | MsG0780040287.01 | 0.818800 | 1.622737e-52 | 1.226833e-49 |
MsG0180004765.01 | MsG0780040287.01 | 0.820619 | 6.234121e-53 | 4.957094e-50 |
MsG0180005049.01 | MsG0780040287.01 | 0.804111 | 2.526484e-49 | 1.291785e-46 |
MsG0180005113.01 | MsG0780040287.01 | 0.830210 | 3.338418e-55 | 3.494350e-52 |
MsG0180005153.01 | MsG0780040287.01 | 0.847846 | 8.928366e-60 | 1.607753e-56 |
MsG0180005575.01 | MsG0780040287.01 | 0.843370 | 1.460684e-58 | 2.280650e-55 |
MsG0180006017.01 | MsG0780040287.01 | 0.817932 | 2.551862e-52 | 1.883744e-49 |
MsG0780040286.01 | MsG0780040287.01 | 0.891433 | 3.990298e-74 | 3.498020e-70 |
MsG0780040287.01 | MsG0780040430.01 | 0.834724 | 2.540556e-56 | 3.040317e-53 |
MsG0780040287.01 | MsG0780040431.01 | 0.803453 | 3.460634e-49 | 1.739724e-46 |
MsG0780040287.01 | MsG0780040432.01 | 0.805708 | 1.171591e-49 | 6.241996e-47 |
MsG0780040287.01 | MsG0780040846.01 | 0.841051 | 6.005587e-58 | 8.718022e-55 |
MsG0780040287.01 | MsG0780040888.01 | 0.810295 | 1.237510e-50 | 7.431179e-48 |
MsG0780040287.01 | MsG0780041259.01 | 0.866148 | 3.522478e-65 | 1.175152e-61 |
MsG0780040287.01 | MsG0780041391.01 | 0.804163 | 2.464310e-49 | 1.261667e-46 |
MsG0780040287.01 | MsG0780041440.01 | 0.814751 | 1.313386e-51 | 8.887272e-49 |
MsG0780040287.01 | MsG0780041475.01 | 0.803486 | 3.407281e-49 | 1.714373e-46 |
MsG0780040287.01 | MsG0780041482.01 | 0.817339 | 3.471235e-52 | 2.521093e-49 |
MsG0780040287.01 | MsG0780041698.01 | 0.843849 | 1.087714e-58 | 1.724096e-55 |
MsG0780040287.01 | MsG0780041699.01 | 0.820134 | 8.052117e-53 | 6.318441e-50 |
MsG0780040287.01 | MsG0780041796.01 | 0.801208 | 1.003492e-48 | 4.764574e-46 |
MsG0780040287.01 | MsG0880041834.01 | 0.833320 | 5.705197e-56 | 6.547523e-53 |
MsG0780040287.01 | MsG0880043480.01 | 0.817676 | 2.913890e-52 | 2.135951e-49 |
MsG0780040287.01 | MsG0880043521.01 | 0.821365 | 4.197543e-53 | 3.407912e-50 |
MsG0780040287.01 | MsG0880044704.01 | 0.800700 | 1.274475e-48 | 5.973667e-46 |
MsG0780040287.01 | MsG0880044975.01 | 0.815710 | 8.043123e-52 | 5.587012e-49 |
MsG0780040287.01 | MsG0880045111.01 | 0.805333 | 1.404003e-49 | 7.407898e-47 |
MsG0780040287.01 | MsG0880045145.01 | 0.829708 | 4.424890e-55 | 4.565090e-52 |
MsG0780040287.01 | MsG0880045362.01 | 0.810318 | 1.223254e-50 | 7.350276e-48 |
MsG0780040287.01 | MsG0880045585.01 | 0.806147 | 9.470844e-50 | 5.102578e-47 |
MsG0780040287.01 | MsG0880045613.01 | 0.803740 | 3.017352e-49 | 1.528142e-46 |
MsG0780040287.01 | MsG0880045765.01 | 0.817231 | 3.670119e-52 | 2.657639e-49 |
MsG0780040287.01 | MsG0880046580.01 | 0.803614 | 3.205644e-49 | 1.618209e-46 |
MsG0780040287.01 | MsG0880046636.01 | 0.812808 | 3.518624e-51 | 2.258906e-48 |
MsG0780040287.01 | MsG0880046790.01 | 0.808397 | 3.159634e-50 | 1.804730e-47 |
MsG0780040287.01 | MsG0880046901.01 | 0.807123 | 5.893476e-50 | 3.255685e-47 |
MsG0780040287.01 | MsG0880046942.01 | 0.822897 | 1.852807e-53 | 1.571146e-50 |
MsG0780040287.01 | MsG0880047135.01 | 0.834787 | 2.449611e-56 | 2.937147e-53 |
MsG0780040287.01 | MsG0880047470.01 | 0.820702 | 5.966476e-53 | 4.755488e-50 |
MsG0780040287.01 | MsG0880047472.01 | 0.824963 | 6.069934e-54 | 5.458669e-51 |
MsG0780040287.01 | MsG0880047473.01 | 0.828147 | 1.056615e-54 | 1.041395e-51 |
MsG0780040287.01 | MsG0880047764.01 | 0.820608 | 6.270756e-53 | 4.984767e-50 |
MsG0280010702.01 | MsG0780040287.01 | 0.801923 | 7.161459e-49 | 3.462230e-46 |
MsG0280010722.01 | MsG0780040287.01 | 0.814550 | 1.455222e-51 | 9.794188e-49 |
MsG0280010753.01 | MsG0780040287.01 | 0.810660 | 1.032180e-50 | 6.258937e-48 |
MsG0280011109.01 | MsG0780040287.01 | 0.821145 | 4.717362e-53 | 3.806740e-50 |
MsG0380011496.01 | MsG0780040287.01 | 0.850668 | 1.463616e-60 | 2.888531e-57 |
MsG0380011501.01 | MsG0780040287.01 | 0.851267 | 9.918151e-61 | 1.996427e-57 |
MsG0380012067.01 | MsG0780040287.01 | 0.813949 | 1.975502e-51 | 1.308034e-48 |
MsG0380013183.01 | MsG0780040287.01 | 0.801329 | 9.477098e-49 | 4.513538e-46 |
MsG0380014225.01 | MsG0780040287.01 | -0.807206 | 5.659846e-50 | 3.133546e-47 |
MsG0680030784.01 | MsG0780040287.01 | 0.823513 | 1.330100e-53 | 1.147700e-50 |
MsG0680031428.01 | MsG0780040287.01 | 0.812881 | 3.391077e-51 | 2.181394e-48 |
MsG0680031621.01 | MsG0780040287.01 | 0.807849 | 4.133387e-50 | 2.326948e-47 |
MsG0680031959.01 | MsG0780040287.01 | 0.837999 | 3.731608e-57 | 4.931965e-54 |
MsG0680034739.01 | MsG0780040287.01 | 0.801325 | 9.498254e-49 | 4.523047e-46 |
MsG0680034853.01 | MsG0780040287.01 | 0.827453 | 1.551265e-54 | 1.498352e-51 |
MsG0680034913.01 | MsG0780040287.01 | 0.836579 | 8.617112e-57 | 1.090456e-53 |
MsG0480018909.01 | MsG0780040287.01 | 0.810718 | 1.002557e-50 | 6.088910e-48 |
MsG0480019279.01 | MsG0780040287.01 | 0.802741 | 4.858557e-49 | 2.398463e-46 |
MsG0480020780.01 | MsG0780040287.01 | 0.801152 | 1.030327e-48 | 4.885293e-46 |
MsG0480020879.01 | MsG0780040287.01 | 0.811147 | 8.094931e-51 | 4.972524e-48 |
MsG0480021195.01 | MsG0780040287.01 | 0.825862 | 3.719880e-54 | 3.432043e-51 |
MsG0480021452.01 | MsG0780040287.01 | 0.815056 | 1.123743e-51 | 7.666933e-49 |
MsG0480021465.01 | MsG0780040287.01 | 0.809803 | 1.579611e-50 | 9.364860e-48 |
MsG0480021724.01 | MsG0780040287.01 | 0.804467 | 2.130083e-49 | 1.099081e-46 |
MsG0480021750.01 | MsG0780040287.01 | 0.800466 | 1.422428e-48 | 6.627669e-46 |
MsG0480021796.01 | MsG0780040287.01 | 0.803235 | 3.839810e-49 | 1.919534e-46 |
MsG0480021918.01 | MsG0780040287.01 | 0.800403 | 1.464966e-48 | 6.815359e-46 |
MsG0480022696.01 | MsG0780040287.01 | 0.809694 | 1.666893e-50 | 9.853902e-48 |
MsG0480023172.01 | MsG0780040287.01 | 0.823082 | 1.677293e-53 | 1.429881e-50 |
MsG0480023600.01 | MsG0780040287.01 | 0.829017 | 6.510878e-55 | 6.581419e-52 |
MsG0480024022.01 | MsG0780040287.01 | 0.816055 | 6.734552e-52 | 4.722560e-49 |
MsG0580024197.01 | MsG0780040287.01 | 0.827495 | 1.515713e-54 | 1.465723e-51 |
MsG0580024966.01 | MsG0780040287.01 | 0.808585 | 2.881731e-50 | 1.653986e-47 |
MsG0580025332.01 | MsG0780040287.01 | 0.802464 | 5.540501e-49 | 2.715864e-46 |
MsG0580025466.01 | MsG0780040287.01 | 0.834574 | 2.770569e-56 | 3.301581e-53 |
MsG0580025587.01 | MsG0780040287.01 | 0.821194 | 4.596695e-53 | 3.714592e-50 |
MsG0580025661.01 | MsG0780040287.01 | 0.811722 | 6.074348e-51 | 3.788328e-48 |
MsG0380015332.01 | MsG0780040287.01 | 0.823490 | 1.346591e-53 | 1.161212e-50 |
MsG0380015555.01 | MsG0780040287.01 | 0.813618 | 2.336473e-51 | 1.533324e-48 |
MsG0380015577.01 | MsG0780040287.01 | 0.804144 | 2.486706e-49 | 1.272522e-46 |
MsG0380016133.01 | MsG0780040287.01 | 0.802752 | 4.831944e-49 | 2.386039e-46 |
MsG0380016407.01 | MsG0780040287.01 | 0.804721 | 1.885721e-49 | 9.794708e-47 |
MsG0380016714.01 | MsG0780040287.01 | 0.810644 | 1.040132e-50 | 6.304416e-48 |
MsG0380016923.01 | MsG0780040287.01 | 0.801271 | 9.740920e-49 | 4.632423e-46 |
MsG0380016970.01 | MsG0780040287.01 | 0.826035 | 3.383737e-54 | 3.137092e-51 |
MsG0380017351.01 | MsG0780040287.01 | 0.825679 | 4.109216e-54 | 3.771332e-51 |
MsG0480018200.01 | MsG0780040287.01 | 0.841333 | 5.062870e-58 | 7.414341e-55 |
MsG0580026485.01 | MsG0780040287.01 | 0.802240 | 6.161248e-49 | 3.002943e-46 |
MsG0580026718.01 | MsG0780040287.01 | 0.800776 | 1.229894e-48 | 5.775843e-46 |
MsG0580027650.01 | MsG0780040287.01 | 0.819792 | 9.639731e-53 | 7.492279e-50 |
MsG0580027655.01 | MsG0780040287.01 | 0.805240 | 1.468741e-49 | 7.730846e-47 |
MsG0580027925.01 | MsG0780040287.01 | 0.854241 | 1.403461e-61 | 3.114642e-58 |
MsG0580028436.01 | MsG0780040287.01 | 0.831554 | 1.563378e-55 | 1.702512e-52 |
MsG0580028960.01 | MsG0780040287.01 | 0.819138 | 1.358990e-52 | 1.037055e-49 |
MsG0580029236.01 | MsG0780040287.01 | 0.830130 | 3.491726e-55 | 3.646206e-52 |
MsG0580029310.01 | MsG0780040287.01 | 0.853256 | 2.695509e-61 | 5.788861e-58 |
MsG0580029736.01 | MsG0780040287.01 | 0.827827 | 1.261513e-54 | 1.231692e-51 |
MsG0680030328.01 | MsG0780040287.01 | 0.822735 | 2.020200e-53 | 1.705387e-50 |
MsG0680030413.01 | MsG0780040287.01 | 0.818132 | 2.298956e-52 | 1.706387e-49 |
MsG0280006461.01 | MsG0780040287.01 | 0.834568 | 2.780040e-56 | 3.312322e-53 |
MsG0280006593.01 | MsG0780040287.01 | 0.810196 | 1.300168e-50 | 7.787050e-48 |
MsG0280006601.01 | MsG0780040287.01 | 0.804698 | 1.906965e-49 | 9.898602e-47 |
MsG0280006966.01 | MsG0780040287.01 | 0.824771 | 6.739772e-54 | 6.027979e-51 |
MsG0280007432.01 | MsG0780040287.01 | 0.817508 | 3.180262e-52 | 2.320548e-49 |
MsG0280007452.01 | MsG0780040287.01 | 0.812268 | 4.617786e-51 | 2.922792e-48 |
MsG0280007506.01 | MsG0780040287.01 | 0.827983 | 1.157538e-54 | 1.135456e-51 |
MsG0280007527.01 | MsG0780040287.01 | 0.812831 | 3.477802e-51 | 2.234077e-48 |
MsG0280007955.01 | MsG0780040287.01 | 0.860384 | 2.144481e-63 | 5.851271e-60 |
MsG0280008418.01 | MsG0780040287.01 | 0.803691 | 3.088672e-49 | 1.562270e-46 |
MsG0280008457.01 | MsG0780040287.01 | 0.837004 | 6.713124e-57 | 8.605619e-54 |
MsG0280009920.01 | MsG0780040287.01 | 0.810950 | 8.932447e-51 | 5.459046e-48 |
MsG0280010489.01 | MsG0780040287.01 | 0.803877 | 2.826803e-49 | 1.436718e-46 |
MsG0680035658.01 | MsG0780040287.01 | 0.827010 | 1.981207e-54 | 1.888797e-51 |
MsG0780036078.01 | MsG0780040287.01 | 0.801475 | 8.847954e-49 | 4.229445e-46 |
MsG0780036307.01 | MsG0780040287.01 | 0.817809 | 2.720533e-52 | 2.001547e-49 |
MsG0780036593.01 | MsG0780040287.01 | 0.827092 | 1.893017e-54 | 1.809168e-51 |
MsG0780036757.01 | MsG0780040287.01 | 0.800222 | 1.594865e-48 | 7.385442e-46 |
MsG0780037141.01 | MsG0780040287.01 | 0.804190 | 2.432717e-49 | 1.246321e-46 |
MsG0780037240.01 | MsG0780040287.01 | 0.807657 | 4.540531e-50 | 2.543424e-47 |
MsG0780037341.01 | MsG0780040287.01 | 0.805061 | 1.601029e-49 | 8.388713e-47 |
MsG0780039170.01 | MsG0780040287.01 | 0.822545 | 2.236487e-53 | 1.877805e-50 |
MsG0780039443.01 | MsG0780040287.01 | 0.823556 | 1.300113e-53 | 1.123138e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040287.01.T01 | MTR_7g087430 | 97.059 | 204 | 6 | 0 | 15 | 218 | 197 | 400 | 1.04e-141 | 402 |
MsG0780040287.01.T01 | MTR_7g087410 | 80.500 | 200 | 38 | 1 | 15 | 213 | 197 | 396 | 4.46e-108 | 316 |
MsG0780040287.01.T01 | MTR_7g087410 | 80.500 | 200 | 38 | 1 | 15 | 213 | 286 | 485 | 7.58e-107 | 316 |
MsG0780040287.01.T01 | MTR_7g087400 | 74.242 | 198 | 51 | 0 | 15 | 212 | 284 | 481 | 2.89e-100 | 299 |
MsG0780040287.01.T01 | MTR_7g087370 | 71.287 | 202 | 58 | 0 | 15 | 216 | 255 | 456 | 3.06e-94 | 283 |
MsG0780040287.01.T01 | MTR_6g027200 | 68.687 | 198 | 62 | 0 | 15 | 212 | 291 | 488 | 9.98e-89 | 270 |
MsG0780040287.01.T01 | MTR_6g027190 | 70.681 | 191 | 56 | 0 | 15 | 205 | 279 | 469 | 1.41e-78 | 244 |
MsG0780040287.01.T01 | MTR_3g099700 | 54.455 | 202 | 91 | 1 | 12 | 212 | 298 | 499 | 1.68e-73 | 231 |
MsG0780040287.01.T01 | MTR_4g048000 | 54.211 | 190 | 87 | 0 | 15 | 204 | 320 | 509 | 2.85e-70 | 223 |
MsG0780040287.01.T01 | MTR_2g088400 | 53.299 | 197 | 90 | 1 | 15 | 209 | 308 | 504 | 1.00e-69 | 221 |
MsG0780040287.01.T01 | MTR_5g032720 | 56.771 | 192 | 82 | 1 | 15 | 205 | 291 | 482 | 2.46e-68 | 217 |
MsG0780040287.01.T01 | MTR_2g022980 | 51.042 | 192 | 94 | 0 | 15 | 206 | 304 | 495 | 3.26e-65 | 209 |
MsG0780040287.01.T01 | MTR_5g033100 | 54.737 | 190 | 86 | 0 | 15 | 204 | 311 | 500 | 2.75e-64 | 207 |
MsG0780040287.01.T01 | MTR_8g069470 | 50.000 | 190 | 95 | 0 | 15 | 204 | 305 | 494 | 4.68e-64 | 207 |
MsG0780040287.01.T01 | MTR_1g021740 | 50.526 | 190 | 94 | 0 | 15 | 204 | 290 | 479 | 1.93e-61 | 199 |
MsG0780040287.01.T01 | MTR_5g032750 | 48.485 | 198 | 99 | 2 | 15 | 211 | 291 | 486 | 2.68e-61 | 199 |
MsG0780040287.01.T01 | MTR_1g100180 | 49.474 | 190 | 96 | 0 | 15 | 204 | 297 | 486 | 2.05e-58 | 192 |
MsG0780040287.01.T01 | MTR_3g099720 | 51.667 | 180 | 87 | 0 | 15 | 194 | 296 | 475 | 1.03e-56 | 187 |
MsG0780040287.01.T01 | MTR_5g090290 | 46.078 | 204 | 110 | 0 | 15 | 218 | 302 | 505 | 3.23e-56 | 187 |
MsG0780040287.01.T01 | MTR_6g047610 | 40.909 | 198 | 115 | 1 | 15 | 210 | 284 | 481 | 6.79e-49 | 166 |
MsG0780040287.01.T01 | MTR_2g088400 | 51.948 | 154 | 74 | 0 | 15 | 168 | 308 | 461 | 7.61e-49 | 166 |
MsG0780040287.01.T01 | MTR_7g082810 | 42.647 | 204 | 114 | 1 | 15 | 215 | 276 | 479 | 1.00e-48 | 166 |
MsG0780040287.01.T01 | MTR_8g063590 | 47.368 | 190 | 100 | 0 | 14 | 203 | 309 | 498 | 4.54e-48 | 165 |
MsG0780040287.01.T01 | MTR_6g047640 | 40.500 | 200 | 119 | 0 | 15 | 214 | 285 | 484 | 1.32e-47 | 163 |
MsG0780040287.01.T01 | MTR_6g004220 | 42.932 | 191 | 109 | 0 | 15 | 205 | 280 | 470 | 3.46e-45 | 156 |
MsG0780040287.01.T01 | MTR_5g087930 | 41.584 | 202 | 102 | 2 | 15 | 214 | 275 | 462 | 1.35e-42 | 149 |
MsG0780040287.01.T01 | MTR_6g004220 | 42.541 | 181 | 104 | 0 | 15 | 195 | 287 | 467 | 4.35e-42 | 149 |
MsG0780040287.01.T01 | MTR_6g081400 | 38.265 | 196 | 119 | 1 | 15 | 210 | 272 | 465 | 2.74e-41 | 146 |
MsG0780040287.01.T01 | MTR_6g047640 | 38.235 | 170 | 105 | 0 | 45 | 214 | 296 | 465 | 3.33e-40 | 143 |
MsG0780040287.01.T01 | MTR_6g081410 | 39.362 | 188 | 114 | 0 | 15 | 202 | 283 | 470 | 1.33e-39 | 142 |
MsG0780040287.01.T01 | MTR_6g047590 | 41.053 | 190 | 112 | 0 | 15 | 204 | 284 | 473 | 1.39e-39 | 142 |
MsG0780040287.01.T01 | MTR_7g082800 | 38.624 | 189 | 116 | 0 | 15 | 203 | 198 | 386 | 2.22e-39 | 139 |
MsG0780040287.01.T01 | MTR_1g108990 | 38.220 | 191 | 118 | 0 | 15 | 205 | 281 | 471 | 3.97e-39 | 140 |
MsG0780040287.01.T01 | MTR_8g106670 | 35.450 | 189 | 122 | 0 | 15 | 203 | 268 | 456 | 5.01e-39 | 140 |
MsG0780040287.01.T01 | MTR_6g081780 | 38.503 | 187 | 115 | 0 | 15 | 201 | 283 | 469 | 2.62e-38 | 138 |
MsG0780040287.01.T01 | MTR_6g081300 | 35.106 | 188 | 122 | 0 | 15 | 202 | 266 | 453 | 3.54e-38 | 138 |
MsG0780040287.01.T01 | MTR_2g078930 | 40.449 | 178 | 106 | 0 | 15 | 192 | 299 | 476 | 6.14e-38 | 137 |
MsG0780040287.01.T01 | MTR_6g081390 | 38.095 | 189 | 117 | 0 | 15 | 203 | 269 | 457 | 1.28e-37 | 136 |
MsG0780040287.01.T01 | MTR_6g081240 | 36.667 | 180 | 114 | 0 | 15 | 194 | 266 | 445 | 1.46e-37 | 135 |
MsG0780040287.01.T01 | MTR_1g109060 | 37.968 | 187 | 116 | 0 | 15 | 201 | 280 | 466 | 1.69e-37 | 136 |
MsG0780040287.01.T01 | MTR_2g079030 | 39.326 | 178 | 108 | 0 | 15 | 192 | 336 | 513 | 3.49e-37 | 136 |
MsG0780040287.01.T01 | MTR_2g079020 | 39.326 | 178 | 108 | 0 | 15 | 192 | 293 | 470 | 8.04e-37 | 134 |
MsG0780040287.01.T01 | MTR_6g081810 | 37.968 | 187 | 116 | 0 | 15 | 201 | 257 | 443 | 1.28e-36 | 133 |
MsG0780040287.01.T01 | MTR_1g109060 | 36.898 | 187 | 117 | 1 | 15 | 201 | 280 | 465 | 1.13e-35 | 131 |
MsG0780040287.01.T01 | MTR_2g078990 | 37.640 | 178 | 111 | 0 | 15 | 192 | 116 | 293 | 1.15e-35 | 128 |
MsG0780040287.01.T01 | MTR_1g108840 | 37.968 | 187 | 116 | 0 | 15 | 201 | 297 | 483 | 2.66e-35 | 130 |
MsG0780040287.01.T01 | MTR_6g066380 | 38.503 | 187 | 115 | 0 | 15 | 201 | 285 | 471 | 3.03e-35 | 130 |
MsG0780040287.01.T01 | MTR_2g078960 | 39.888 | 178 | 107 | 0 | 15 | 192 | 289 | 466 | 9.71e-35 | 129 |
MsG0780040287.01.T01 | MTR_2g078970 | 38.202 | 178 | 110 | 0 | 15 | 192 | 287 | 464 | 2.88e-34 | 127 |
MsG0780040287.01.T01 | MTR_1g108810 | 36.264 | 182 | 116 | 0 | 15 | 196 | 290 | 471 | 1.58e-33 | 125 |
MsG0780040287.01.T01 | MTR_6g081310 | 36.364 | 187 | 119 | 0 | 15 | 201 | 264 | 450 | 4.37e-33 | 124 |
MsG0780040287.01.T01 | MTR_5g090280 | 32.609 | 230 | 120 | 3 | 15 | 217 | 198 | 419 | 6.70e-30 | 115 |
MsG0780040287.01.T01 | MTR_3g111020 | 30.675 | 163 | 111 | 1 | 37 | 199 | 331 | 491 | 1.51e-19 | 86.7 |
MsG0780040287.01.T01 | MTR_0039s0080 | 25.359 | 209 | 151 | 1 | 15 | 218 | 294 | 502 | 4.17e-19 | 85.5 |
MsG0780040287.01.T01 | MTR_5g067460 | 29.518 | 166 | 116 | 1 | 45 | 210 | 341 | 505 | 4.84e-19 | 85.5 |
MsG0780040287.01.T01 | MTR_1g101500 | 29.936 | 157 | 110 | 0 | 43 | 199 | 348 | 504 | 1.54e-18 | 84.0 |
MsG0780040287.01.T01 | MTR_5g010830 | 29.677 | 155 | 109 | 0 | 45 | 199 | 351 | 505 | 4.44e-18 | 82.4 |
MsG0780040287.01.T01 | MTR_6g043810 | 26.341 | 205 | 144 | 2 | 15 | 212 | 287 | 491 | 5.38e-18 | 82.4 |
MsG0780040287.01.T01 | MTR_6g043810 | 26.341 | 205 | 144 | 2 | 15 | 212 | 297 | 501 | 6.53e-18 | 82.0 |
MsG0780040287.01.T01 | MTR_6g088805 | 29.487 | 156 | 110 | 0 | 43 | 198 | 308 | 463 | 1.18e-17 | 81.3 |
MsG0780040287.01.T01 | MTR_4g027920 | 23.529 | 204 | 152 | 1 | 15 | 218 | 414 | 613 | 1.80e-17 | 80.9 |
MsG0780040287.01.T01 | MTR_2g435930 | 26.203 | 187 | 138 | 0 | 15 | 201 | 291 | 477 | 4.37e-17 | 79.7 |
MsG0780040287.01.T01 | MTR_6g004220 | 36.937 | 111 | 70 | 0 | 15 | 125 | 287 | 397 | 1.30e-16 | 78.2 |
MsG0780040287.01.T01 | MTR_8g102430 | 29.299 | 157 | 91 | 2 | 37 | 193 | 301 | 437 | 5.65e-13 | 67.4 |
MsG0780040287.01.T01 | MTR_5g011540 | 23.923 | 209 | 154 | 1 | 15 | 218 | 300 | 508 | 7.44e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780040287.01.T01 | AT1G33110 | 62.500 | 200 | 73 | 1 | 15 | 214 | 290 | 487 | 4.57e-86 | 263 |
MsG0780040287.01.T01 | AT1G33100 | 62.121 | 198 | 73 | 1 | 15 | 212 | 287 | 482 | 4.92e-84 | 258 |
MsG0780040287.01.T01 | AT1G33090 | 62.121 | 198 | 73 | 1 | 15 | 212 | 290 | 485 | 2.18e-78 | 243 |
MsG0780040287.01.T01 | AT1G33080 | 57.789 | 199 | 82 | 1 | 15 | 213 | 290 | 486 | 2.00e-76 | 238 |
MsG0780040287.01.T01 | AT1G33080 | 61.111 | 180 | 70 | 0 | 15 | 194 | 290 | 469 | 1.95e-71 | 225 |
MsG0780040287.01.T01 | AT4G21903 | 51.795 | 195 | 94 | 0 | 15 | 209 | 198 | 392 | 3.54e-70 | 219 |
MsG0780040287.01.T01 | AT4G21910 | 53.061 | 196 | 91 | 1 | 15 | 209 | 309 | 504 | 2.41e-69 | 220 |
MsG0780040287.01.T01 | AT4G21910 | 53.061 | 196 | 91 | 1 | 15 | 209 | 309 | 504 | 2.41e-69 | 220 |
MsG0780040287.01.T01 | AT4G21903 | 51.795 | 195 | 94 | 0 | 15 | 209 | 307 | 501 | 2.91e-69 | 220 |
MsG0780040287.01.T01 | AT4G21910 | 53.061 | 196 | 91 | 1 | 15 | 209 | 311 | 506 | 3.83e-69 | 220 |
MsG0780040287.01.T01 | AT4G21910 | 53.061 | 196 | 91 | 1 | 15 | 209 | 311 | 506 | 3.83e-69 | 220 |
MsG0780040287.01.T01 | AT1G11670 | 51.282 | 195 | 95 | 0 | 15 | 209 | 305 | 499 | 1.45e-68 | 218 |
MsG0780040287.01.T01 | AT1G61890 | 52.083 | 192 | 92 | 0 | 15 | 206 | 302 | 493 | 6.07e-67 | 214 |
MsG0780040287.01.T01 | AT5G65380 | 54.167 | 192 | 87 | 1 | 15 | 205 | 291 | 482 | 5.18e-65 | 209 |
MsG0780040287.01.T01 | AT3G21690 | 52.356 | 191 | 91 | 0 | 15 | 205 | 307 | 497 | 7.11e-65 | 209 |
MsG0780040287.01.T01 | AT4G21903 | 51.323 | 189 | 92 | 0 | 15 | 203 | 307 | 495 | 9.31e-65 | 209 |
MsG0780040287.01.T01 | AT1G23300 | 48.000 | 200 | 104 | 0 | 15 | 214 | 298 | 497 | 4.90e-64 | 207 |
MsG0780040287.01.T01 | AT1G61890 | 53.889 | 180 | 83 | 0 | 15 | 194 | 302 | 481 | 5.08e-63 | 204 |
MsG0780040287.01.T01 | AT3G26590 | 50.526 | 190 | 94 | 0 | 15 | 204 | 197 | 386 | 5.39e-63 | 201 |
MsG0780040287.01.T01 | AT5G44050 | 51.795 | 195 | 93 | 1 | 15 | 208 | 294 | 488 | 9.11e-63 | 203 |
MsG0780040287.01.T01 | AT3G26590 | 50.526 | 190 | 94 | 0 | 15 | 204 | 299 | 488 | 3.50e-62 | 201 |
MsG0780040287.01.T01 | AT5G38030 | 49.746 | 197 | 99 | 0 | 15 | 211 | 299 | 495 | 6.48e-62 | 201 |
MsG0780040287.01.T01 | AT3G03620 | 53.030 | 198 | 92 | 1 | 15 | 212 | 291 | 487 | 1.23e-61 | 200 |
MsG0780040287.01.T01 | AT3G03620 | 53.030 | 198 | 92 | 1 | 15 | 212 | 291 | 487 | 1.23e-61 | 200 |
MsG0780040287.01.T01 | AT1G47530 | 51.053 | 190 | 93 | 0 | 15 | 204 | 197 | 386 | 1.51e-61 | 197 |
MsG0780040287.01.T01 | AT1G47530 | 51.053 | 190 | 93 | 0 | 15 | 204 | 289 | 478 | 5.04e-61 | 198 |
MsG0780040287.01.T01 | AT1G12950 | 46.500 | 200 | 107 | 0 | 15 | 214 | 321 | 520 | 1.65e-60 | 197 |
MsG0780040287.01.T01 | AT5G10420 | 51.010 | 198 | 96 | 1 | 15 | 211 | 292 | 489 | 1.08e-59 | 195 |
MsG0780040287.01.T01 | AT4G00350 | 47.739 | 199 | 104 | 0 | 18 | 216 | 344 | 542 | 2.63e-58 | 192 |
MsG0780040287.01.T01 | AT5G17700 | 46.231 | 199 | 107 | 0 | 15 | 213 | 288 | 486 | 2.42e-54 | 181 |
MsG0780040287.01.T01 | AT5G17700 | 46.231 | 199 | 107 | 0 | 15 | 213 | 288 | 486 | 2.42e-54 | 181 |
MsG0780040287.01.T01 | AT3G59030 | 48.148 | 189 | 98 | 0 | 15 | 203 | 306 | 494 | 1.35e-53 | 179 |
MsG0780040287.01.T01 | AT4G25640 | 48.276 | 203 | 101 | 1 | 15 | 217 | 287 | 485 | 1.88e-48 | 165 |
MsG0780040287.01.T01 | AT4G25640 | 48.276 | 203 | 101 | 1 | 15 | 217 | 287 | 485 | 3.23e-48 | 165 |
MsG0780040287.01.T01 | AT1G61890 | 49.057 | 159 | 81 | 0 | 15 | 173 | 302 | 460 | 1.08e-45 | 158 |
MsG0780040287.01.T01 | AT1G33110 | 66.667 | 114 | 38 | 0 | 15 | 128 | 290 | 403 | 7.80e-44 | 151 |
MsG0780040287.01.T01 | AT1G66780 | 40.107 | 187 | 112 | 0 | 15 | 201 | 290 | 476 | 6.92e-41 | 145 |
MsG0780040287.01.T01 | AT2G04100 | 39.037 | 187 | 114 | 0 | 15 | 201 | 285 | 471 | 8.16e-38 | 137 |
MsG0780040287.01.T01 | AT5G52450 | 36.598 | 194 | 123 | 0 | 15 | 208 | 281 | 474 | 1.56e-37 | 136 |
MsG0780040287.01.T01 | AT2G34360 | 39.080 | 174 | 106 | 0 | 35 | 208 | 296 | 469 | 3.60e-37 | 135 |
MsG0780040287.01.T01 | AT1G15170 | 35.829 | 187 | 120 | 0 | 15 | 201 | 170 | 356 | 5.30e-37 | 132 |
MsG0780040287.01.T01 | AT1G15150 | 36.364 | 187 | 119 | 0 | 15 | 201 | 170 | 356 | 1.53e-36 | 132 |
MsG0780040287.01.T01 | AT1G15170 | 35.829 | 187 | 120 | 0 | 15 | 201 | 289 | 475 | 2.12e-36 | 133 |
MsG0780040287.01.T01 | AT2G04100 | 39.011 | 182 | 111 | 0 | 15 | 196 | 285 | 466 | 4.21e-36 | 132 |
MsG0780040287.01.T01 | AT1G64820 | 36.170 | 188 | 118 | 2 | 15 | 201 | 284 | 470 | 4.89e-36 | 132 |
MsG0780040287.01.T01 | AT4G25640 | 50.336 | 149 | 74 | 0 | 15 | 163 | 287 | 435 | 5.72e-36 | 132 |
MsG0780040287.01.T01 | AT1G15150 | 36.364 | 187 | 119 | 0 | 15 | 201 | 286 | 472 | 6.21e-36 | 132 |
MsG0780040287.01.T01 | AT1G15160 | 35.602 | 191 | 115 | 2 | 15 | 201 | 286 | 472 | 2.13e-34 | 128 |
MsG0780040287.01.T01 | AT1G71140 | 37.696 | 191 | 111 | 3 | 15 | 201 | 281 | 467 | 2.38e-34 | 127 |
MsG0780040287.01.T01 | AT2G04090 | 36.898 | 187 | 118 | 0 | 15 | 201 | 285 | 471 | 2.49e-34 | 127 |
MsG0780040287.01.T01 | AT2G34360 | 36.932 | 176 | 109 | 1 | 33 | 208 | 254 | 427 | 3.09e-34 | 127 |
MsG0780040287.01.T01 | AT2G04070 | 39.362 | 188 | 112 | 2 | 15 | 201 | 282 | 468 | 5.30e-34 | 127 |
MsG0780040287.01.T01 | AT2G04040 | 39.362 | 188 | 112 | 2 | 15 | 201 | 282 | 468 | 6.36e-34 | 126 |
MsG0780040287.01.T01 | AT1G66760 | 36.364 | 187 | 119 | 0 | 15 | 201 | 283 | 469 | 9.91e-34 | 126 |
MsG0780040287.01.T01 | AT2G04080 | 37.234 | 188 | 116 | 2 | 15 | 201 | 282 | 468 | 7.20e-33 | 124 |
MsG0780040287.01.T01 | AT1G66760 | 35.519 | 183 | 118 | 0 | 15 | 197 | 155 | 337 | 1.70e-32 | 120 |
MsG0780040287.01.T01 | AT1G66760 | 35.714 | 182 | 117 | 0 | 15 | 196 | 283 | 464 | 7.38e-32 | 120 |
MsG0780040287.01.T01 | AT1G15180 | 35.602 | 191 | 115 | 2 | 15 | 201 | 290 | 476 | 3.01e-31 | 119 |
MsG0780040287.01.T01 | AT2G04080 | 36.413 | 184 | 115 | 2 | 15 | 197 | 282 | 464 | 6.28e-31 | 118 |
MsG0780040287.01.T01 | AT1G73700 | 37.245 | 196 | 123 | 0 | 15 | 210 | 279 | 474 | 1.07e-30 | 117 |
MsG0780040287.01.T01 | AT3G23550 | 35.955 | 178 | 114 | 0 | 15 | 192 | 286 | 463 | 1.08e-30 | 117 |
MsG0780040287.01.T01 | AT2G04050 | 36.702 | 188 | 117 | 2 | 15 | 201 | 282 | 468 | 2.31e-30 | 117 |
MsG0780040287.01.T01 | AT3G23560 | 35.955 | 178 | 114 | 0 | 15 | 192 | 294 | 471 | 6.20e-29 | 113 |
MsG0780040287.01.T01 | AT2G04066 | 37.692 | 130 | 80 | 1 | 72 | 201 | 35 | 163 | 1.58e-25 | 98.2 |
MsG0780040287.01.T01 | AT5G17700 | 45.614 | 114 | 62 | 0 | 15 | 128 | 288 | 401 | 6.86e-25 | 101 |
MsG0780040287.01.T01 | AT3G59030 | 46.847 | 111 | 59 | 0 | 15 | 125 | 306 | 416 | 2.26e-23 | 97.1 |
MsG0780040287.01.T01 | AT1G71870 | 26.866 | 201 | 145 | 2 | 15 | 213 | 296 | 496 | 5.52e-19 | 85.1 |
MsG0780040287.01.T01 | AT1G58340 | 27.273 | 176 | 124 | 2 | 45 | 218 | 343 | 516 | 5.74e-17 | 79.3 |
MsG0780040287.01.T01 | AT4G23030 | 28.571 | 168 | 120 | 0 | 43 | 210 | 316 | 483 | 9.49e-17 | 78.6 |
MsG0780040287.01.T01 | AT5G52050 | 31.818 | 154 | 105 | 0 | 45 | 198 | 326 | 479 | 1.72e-16 | 77.8 |
MsG0780040287.01.T01 | AT4G29140 | 30.061 | 163 | 112 | 1 | 37 | 199 | 335 | 495 | 1.96e-16 | 77.8 |
MsG0780040287.01.T01 | AT5G49130 | 30.357 | 168 | 117 | 0 | 36 | 203 | 316 | 483 | 1.91e-15 | 74.7 |
MsG0780040287.01.T01 | AT2G38510 | 23.902 | 205 | 155 | 1 | 14 | 217 | 261 | 465 | 2.21e-15 | 74.7 |
MsG0780040287.01.T01 | AT5G19700 | 29.448 | 163 | 113 | 1 | 37 | 199 | 315 | 475 | 1.79e-13 | 68.9 |
MsG0780040287.01.T01 | AT1G15180 | 30.435 | 115 | 72 | 2 | 15 | 125 | 170 | 280 | 3.07e-11 | 62.4 |
MsG0780040287.01.T01 | AT3G23560 | 35.135 | 111 | 72 | 0 | 15 | 125 | 294 | 404 | 8.74e-11 | 61.2 |
Find 46 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACTGCAAACTTTGCATCTT+TGG | 0.128532 | 7:-75488750 | None:intergenic |
CTTCCTTTCTGTAGGGTATA+TGG | 0.215347 | 7:+75489249 | MsG0780040287.01.T01:intron |
GATGATATCACTTGGTTTCA+TGG | 0.286945 | 7:+75486979 | MsG0780040287.01.T01:CDS |
ATTCCTGTTGGGATTGTTCT+TGG | 0.302775 | 7:+75489125 | MsG0780040287.01.T01:CDS |
GTCCTTACATCATTCACAAT+TGG | 0.324954 | 7:+75488782 | MsG0780040287.01.T01:CDS |
GGAAATGCAGGAGTTGCTAT+TGG | 0.356337 | 7:+75489044 | MsG0780040287.01.T01:intron |
CTAGGTTGTTATTACATCAT+AGG | 0.372662 | 7:+75489101 | MsG0780040287.01.T01:CDS |
ATATGGATTGGTATGTTGTT+TGG | 0.377225 | 7:+75489266 | MsG0780040287.01.T01:CDS |
TCGTATTAATAAGTGGTCTA+AGG | 0.405797 | 7:+75489649 | MsG0780040287.01.T01:CDS |
GATGCGACTGTTTCATGATC+AGG | 0.416412 | 7:-75489677 | None:intergenic |
TCCTTACATCATTCACAATT+GGG | 0.421733 | 7:+75488783 | MsG0780040287.01.T01:CDS |
TAATCAGCTACAAAACTGAT+TGG | 0.436530 | 7:+75489318 | MsG0780040287.01.T01:CDS |
TGAGGCCACGTCCTTGTTTG+TGG | 0.438464 | 7:-75488861 | None:intergenic |
CAAAACTGATTGGGACAAAC+AGG | 0.440943 | 7:+75489328 | MsG0780040287.01.T01:CDS |
TTTCTGTAGGGTATATGGAT+TGG | 0.444215 | 7:+75489254 | MsG0780040287.01.T01:intron |
ACATCATAGGTATTCCTGTT+GGG | 0.447520 | 7:+75489114 | MsG0780040287.01.T01:CDS |
ATTTACAGTCTCAACATCAA+TGG | 0.464897 | 7:+75486947 | MsG0780040287.01.T01:intron |
GCAGGAGTTGCTATTGGAGC+AGG | 0.468595 | 7:+75489050 | MsG0780040287.01.T01:intron |
AAATTGATGCTCTATCCATA+TGG | 0.498228 | 7:+75486757 | MsG0780040287.01.T01:CDS |
CTTAATTTGCAGTGTTAGAG+TGG | 0.505711 | 7:+75488703 | MsG0780040287.01.T01:intron |
TACTCACCTTGACTTGCAAA+TGG | 0.506891 | 7:-75489157 | None:intergenic |
TACATCATAGGTATTCCTGT+TGG | 0.507006 | 7:+75489113 | MsG0780040287.01.T01:CDS |
TTACCAAGAACAATCCCAAC+AGG | 0.507831 | 7:-75489128 | None:intergenic |
GTTAGAGTGGCAAATGAGCT+TGG | 0.511731 | 7:+75488716 | MsG0780040287.01.T01:CDS |
ACCCAATTGTGAATGATGTA+AGG | 0.512296 | 7:-75488784 | None:intergenic |
AGTATAGAAACTGCTAATAG+AGG | 0.517489 | 7:-75488902 | None:intergenic |
AATCAGCTACAAAACTGATT+GGG | 0.519497 | 7:+75489319 | MsG0780040287.01.T01:CDS |
CTCGGAATCGTATTAATAAG+TGG | 0.530392 | 7:+75489642 | MsG0780040287.01.T01:CDS |
AGTTTACCATTTGCAAGTCA+AGG | 0.535482 | 7:+75489151 | MsG0780040287.01.T01:CDS |
GTGGCAAATGAGCTTGGAAA+AGG | 0.536358 | 7:+75488722 | MsG0780040287.01.T01:CDS |
ACAGTCTCAACATCAATGGA+TGG | 0.543286 | 7:+75486951 | MsG0780040287.01.T01:intron |
GAATTAGTACCTGAGAGTAC+AGG | 0.558659 | 7:-75488941 | None:intergenic |
ATGTGCAGGTAACTATTGCT+CGG | 0.559960 | 7:+75489624 | MsG0780040287.01.T01:intron |
AGTGTTCAACCTGTACTCTC+AGG | 0.564512 | 7:+75488932 | MsG0780040287.01.T01:CDS |
ATGCGACTGTTTCATGATCA+GGG | 0.570765 | 7:-75489676 | None:intergenic |
AAGGACGTGGCCTCAGCTGT+TGG | 0.580851 | 7:+75488869 | MsG0780040287.01.T01:CDS |
CAGTCTCAACATCAATGGAT+GGG | 0.581906 | 7:+75486952 | MsG0780040287.01.T01:intron |
TATTAATAAGTGGTCTAAGG+TGG | 0.600657 | 7:+75489652 | MsG0780040287.01.T01:CDS |
CTATGATGTAATAACAACCT+AGG | 0.609684 | 7:-75489100 | None:intergenic |
ATTGTAGCATATGTGAACCT+AGG | 0.624206 | 7:+75489083 | MsG0780040287.01.T01:CDS |
TTGGTTTCATGGCTGCAGCA+AGG | 0.634709 | 7:+75486990 | MsG0780040287.01.T01:CDS |
CAGGAGTTGCTATTGGAGCA+GGG | 0.643737 | 7:+75489051 | MsG0780040287.01.T01:intron |
TGACAAATCACCAACAGCTG+AGG | 0.652453 | 7:-75488879 | None:intergenic |
TGGGAAATGATGATATCACT+TGG | 0.667441 | 7:+75486971 | MsG0780040287.01.T01:CDS |
TCTTGAGCTATGGTACAACA+CGG | 0.751011 | 7:+75486693 | None:intergenic |
GAGTTGCTATTGGAGCAGGG+TGG | 0.770495 | 7:+75489054 | MsG0780040287.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAATACATAAAAATTTA+CGG | - | Chr7:75487685-75487704 | None:intergenic | 10.0% |
!! | TTTAAATAGAAAAAAGTTTA+CGG | - | Chr7:75487656-75487675 | None:intergenic | 10.0% |
!!! | TAAACTTTTTTCTATTTAAA+CGG | + | Chr7:75487656-75487675 | MsG0780040287.01.T01:intron | 10.0% |
!! | AATGTTAAATGTTAATTTCA+TGG | - | Chr7:75489022-75489041 | None:intergenic | 15.0% |
!! | ATAAGAAAAATAAAAACAGA+AGG | - | Chr7:75488811-75488830 | None:intergenic | 15.0% |
!!! | AATCCTTTTAAATAGAAAAA+TGG | - | Chr7:75487550-75487569 | None:intergenic | 15.0% |
!!! | AATTATGTTGTTTTTTACTA+TGG | + | Chr7:75488661-75488680 | MsG0780040287.01.T01:intron | 15.0% |
!!! | ATTAGTAAACTTTTCTATTT+AGG | + | Chr7:75487419-75487438 | MsG0780040287.01.T01:intron | 15.0% |
!!! | GAAATTAACATTTAACATTT+TGG | + | Chr7:75489023-75489042 | MsG0780040287.01.T01:intron | 15.0% |
!!! | TTAGTAAACTTTTCTATTTA+GGG | + | Chr7:75487420-75487439 | MsG0780040287.01.T01:intron | 15.0% |
!! | AAATATCTTCGTATACTTTA+TGG | - | Chr7:75488493-75488512 | None:intergenic | 20.0% |
!! | CATAAAAAGTTCGATTAAAT+TGG | + | Chr7:75488592-75488611 | MsG0780040287.01.T01:intron | 20.0% |
!! | CCAATAAAGCAAAAAAAAAA+TGG | - | Chr7:75489371-75489390 | None:intergenic | 20.0% |
!! | GTTCGAATAAAAATATTAAC+AGG | + | Chr7:75487752-75487771 | MsG0780040287.01.T01:intron | 20.0% |
!! | TAAAAAACAACATAATTGTG+TGG | - | Chr7:75488658-75488677 | None:intergenic | 20.0% |
!! | TAACTATAATATGCTTAAGA+TGG | - | Chr7:75489429-75489448 | None:intergenic | 20.0% |
!! | TGATAGCATAAAAAAGTTTA+CGG | - | Chr7:75487573-75487592 | None:intergenic | 20.0% |
!! | TGCAATTACTACATATTTAT+TGG | - | Chr7:75487961-75487980 | None:intergenic | 20.0% |
!!! | AAGAATTTAATTTTCATGCA+CGG | + | Chr7:75489461-75489480 | MsG0780040287.01.T01:intron | 20.0% |
!!! | AGTCCATTTTTCTATTTAAA+AGG | + | Chr7:75487544-75487563 | MsG0780040287.01.T01:intron | 20.0% |
!!! | CCATTTTTTTTTTGCTTTAT+TGG | + | Chr7:75489368-75489387 | MsG0780040287.01.T01:intron | 20.0% |
!!! | TATTTTTATTCGAACTCTTT+TGG | - | Chr7:75487747-75487766 | None:intergenic | 20.0% |
!!! | TGGTGGATTTTATATATTTA+AGG | + | Chr7:75488549-75488568 | MsG0780040287.01.T01:intron | 20.0% |
!!! | TTATATTTTTACCACAAACA+AGG | + | Chr7:75488850-75488869 | MsG0780040287.01.T01:CDS | 20.0% |
! | AAAAAGTTCGATTAAATTGG+TGG | + | Chr7:75488595-75488614 | MsG0780040287.01.T01:intron | 25.0% |
! | AAACTTCTATTGTCAATGTA+TGG | + | Chr7:75488252-75488271 | MsG0780040287.01.T01:intron | 25.0% |
! | AAATTAAGAAAGGCAAAAGT+TGG | - | Chr7:75488691-75488710 | None:intergenic | 25.0% |
! | AATAATTATGTTTCATGTGC+AGG | + | Chr7:75489610-75489629 | MsG0780040287.01.T01:intron | 25.0% |
! | AATACAACCAAAACATAAAG+TGG | - | Chr7:75486834-75486853 | None:intergenic | 25.0% |
! | ACCAACATATTGTAGAAAAA+TGG | - | Chr7:75488010-75488029 | None:intergenic | 25.0% |
! | AGAAAAGTTTACTAATCGTT+GGG | - | Chr7:75487415-75487434 | None:intergenic | 25.0% |
! | AGATATATAGTAGTGTCTAA+TGG | - | Chr7:75489228-75489247 | None:intergenic | 25.0% |
! | ATAATATGCTTAAGATGGAA+TGG | - | Chr7:75489424-75489443 | None:intergenic | 25.0% |
! | ATGAATACATACGATTTGAT+TGG | - | Chr7:75487492-75487511 | None:intergenic | 25.0% |
! | CTTAATAGTTGAGACTAAAT+TGG | + | Chr7:75488529-75488548 | MsG0780040287.01.T01:intron | 25.0% |
! | GACTATCTTATATATATTGC+AGG | - | Chr7:75487528-75487547 | None:intergenic | 25.0% |
! | TAGAAAAGTTTACTAATCGT+TGG | - | Chr7:75487416-75487435 | None:intergenic | 25.0% |
! | TAGTACAACTTAGATGATAA+AGG | - | Chr7:75487138-75487157 | None:intergenic | 25.0% |
! | TATCATCTAAGTTGTACTAT+GGG | + | Chr7:75487139-75487158 | MsG0780040287.01.T01:intron | 25.0% |
! | TCTTTCGTAATTTATCTTGA+TGG | + | Chr7:75488172-75488191 | MsG0780040287.01.T01:intron | 25.0% |
! | TTATCATCTAAGTTGTACTA+TGG | + | Chr7:75487138-75487157 | MsG0780040287.01.T01:intron | 25.0% |
! | TTGAAAATACTAATCGTTGA+TGG | + | Chr7:75488105-75488124 | MsG0780040287.01.T01:intron | 25.0% |
! | TTTCTATGCTGTCTATAATT+TGG | + | Chr7:75487611-75487630 | MsG0780040287.01.T01:intron | 25.0% |
!! | GACATTAACTACGATTTTAA+TGG | - | Chr7:75487374-75487393 | None:intergenic | 25.0% |
!! | TACTTTATGGACTAAATTGA+TGG | - | Chr7:75488480-75488499 | None:intergenic | 25.0% |
!! | TTTTATATACTTTAGCGAGT+AGG | - | Chr7:75488431-75488450 | None:intergenic | 25.0% |
!!! | ACCATTTTTCTACAATATGT+TGG | + | Chr7:75488006-75488025 | MsG0780040287.01.T01:intron | 25.0% |
!!! | ATTTAACATTTTGGAAATGC+AGG | + | Chr7:75489032-75489051 | MsG0780040287.01.T01:intron | 25.0% |
!!! | CAACTCTAGCTTTATAATAA+AGG | - | Chr7:75487186-75487205 | None:intergenic | 25.0% |
AAACATAGCCTTTGAATCAA+CGG | - | Chr7:75487309-75487328 | None:intergenic | 30.0% | |
AAATTGATGCTCTATCCATA+TGG | + | Chr7:75486757-75486776 | MsG0780040287.01.T01:CDS | 30.0% | |
AATAGTTGAGACTAAATTGG+TGG | + | Chr7:75488532-75488551 | MsG0780040287.01.T01:intron | 30.0% | |
AATCAGCTACAAAACTGATT+GGG | + | Chr7:75489319-75489338 | MsG0780040287.01.T01:CDS | 30.0% | |
AGATCATATAAATGCTTAGG+AGG | - | Chr7:75487248-75487267 | None:intergenic | 30.0% | |
AGGAATATTTCGACATGTTA+GGG | - | Chr7:75487111-75487130 | None:intergenic | 30.0% | |
AGTATAGAAACTGCTAATAG+AGG | - | Chr7:75488905-75488924 | None:intergenic | 30.0% | |
AGTCTCAACTATTAAGATAC+AGG | - | Chr7:75488525-75488544 | None:intergenic | 30.0% | |
ATATCTTCTTCCTTTCTGTA+GGG | + | Chr7:75489242-75489261 | MsG0780040287.01.T01:intron | 30.0% | |
ATGAAATGTGAACATGCAAA+AGG | - | Chr7:75486787-75486806 | None:intergenic | 30.0% | |
ATGCTGTCTATAATTTGGTT+AGG | + | Chr7:75487616-75487635 | MsG0780040287.01.T01:intron | 30.0% | |
ATTTACAGTCTCAACATCAA+TGG | + | Chr7:75486947-75486966 | MsG0780040287.01.T01:intron | 30.0% | |
CTAACACTGCAAATTAAGAA+AGG | - | Chr7:75488701-75488720 | None:intergenic | 30.0% | |
CTATGATGTAATAACAACCT+AGG | - | Chr7:75489103-75489122 | None:intergenic | 30.0% | |
CTGAGATCATATAAATGCTT+AGG | - | Chr7:75487251-75487270 | None:intergenic | 30.0% | |
GATCATATAAATGCTTAGGA+GGG | - | Chr7:75487247-75487266 | None:intergenic | 30.0% | |
TAATCAGCTACAAAACTGAT+TGG | + | Chr7:75489318-75489337 | MsG0780040287.01.T01:CDS | 30.0% | |
TAGCAATGAATTCACATCAA+CGG | - | Chr7:75487274-75487293 | None:intergenic | 30.0% | |
TATATCTTCTTCCTTTCTGT+AGG | + | Chr7:75489241-75489260 | MsG0780040287.01.T01:intron | 30.0% | |
TATTAATAAGTGGTCTAAGG+TGG | + | Chr7:75489652-75489671 | MsG0780040287.01.T01:CDS | 30.0% | |
TCCTTACATCATTCACAATT+GGG | + | Chr7:75488783-75488802 | MsG0780040287.01.T01:CDS | 30.0% | |
TCGTATTAATAAGTGGTCTA+AGG | + | Chr7:75489649-75489668 | MsG0780040287.01.T01:CDS | 30.0% | |
TGCATTCAATACACACTAAT+TGG | - | Chr7:75487859-75487878 | None:intergenic | 30.0% | |
TTACATTGCTTCTTTGTTAG+TGG | + | Chr7:75489395-75489414 | MsG0780040287.01.T01:intron | 30.0% | |
TTCGTGATAAACAACATTTG+AGG | - | Chr7:75488151-75488170 | None:intergenic | 30.0% | |
! | CTAGGTTGTTATTACATCAT+AGG | + | Chr7:75489101-75489120 | MsG0780040287.01.T01:CDS | 30.0% |
! | GTTGTAGTCATTGTTTGTTT+TGG | + | Chr7:75488356-75488375 | MsG0780040287.01.T01:intron | 30.0% |
! | TCGGTCTAAAAAGTTTTACA+CGG | + | Chr7:75489484-75489503 | MsG0780040287.01.T01:intron | 30.0% |
! | TGTTTGTCCACTTTATGTTT+TGG | + | Chr7:75486824-75486843 | MsG0780040287.01.T01:intron | 30.0% |
!! | ATATGGATTGGTATGTTGTT+TGG | + | Chr7:75489266-75489285 | MsG0780040287.01.T01:CDS | 30.0% |
!! | ATTTAATTTTCATGCACGGT+CGG | + | Chr7:75489465-75489484 | MsG0780040287.01.T01:intron | 30.0% |
!! | CAAGCTATTTTGTTTAGAGT+TGG | - | Chr7:75486878-75486897 | None:intergenic | 30.0% |
!!! | ACGGTATTGATTCTTTTAAC+AGG | + | Chr7:75486712-75486731 | MsG0780040287.01.T01:CDS | 30.0% |
!!! | TTGTACACTTTTTTTGTTGC+AGG | - | Chr7:75487720-75487739 | None:intergenic | 30.0% |
AATCCATATACCCTACAGAA+AGG | - | Chr7:75489255-75489274 | None:intergenic | 35.0% | |
AATGCTTAGGAGGGAAAAAT+AGG | - | Chr7:75487238-75487257 | None:intergenic | 35.0% | |
ACATCATAGGTATTCCTGTT+GGG | + | Chr7:75489114-75489133 | MsG0780040287.01.T01:CDS | 35.0% | |
ACCCAATTGTGAATGATGTA+AGG | - | Chr7:75488787-75488806 | None:intergenic | 35.0% | |
ACTTAGATGATAAAGGTTGC+AGG | - | Chr7:75487131-75487150 | None:intergenic | 35.0% | |
AGTTTACCATTTGCAAGTCA+AGG | + | Chr7:75489151-75489170 | MsG0780040287.01.T01:CDS | 35.0% | |
ATCTTAAGCGACGTAAACAA+AGG | - | Chr7:75486916-75486935 | None:intergenic | 35.0% | |
ATGCTTAGGAGGGAAAAATA+GGG | - | Chr7:75487237-75487256 | None:intergenic | 35.0% | |
ATTGTAGCATATGTGAACCT+AGG | + | Chr7:75489083-75489102 | MsG0780040287.01.T01:CDS | 35.0% | |
CAGGAATATTTCGACATGTT+AGG | - | Chr7:75487112-75487131 | None:intergenic | 35.0% | |
CATGCAAAAGGATTACCATA+TGG | - | Chr7:75486775-75486794 | None:intergenic | 35.0% | |
CTCGGAATCGTATTAATAAG+TGG | + | Chr7:75489642-75489661 | MsG0780040287.01.T01:CDS | 35.0% | |
GATGATATCACTTGGTTTCA+TGG | + | Chr7:75486979-75486998 | MsG0780040287.01.T01:CDS | 35.0% | |
GGAAAAATAGGGAGTGATTA+GGG | - | Chr7:75487226-75487245 | None:intergenic | 35.0% | |
GTCCTTACATCATTCACAAT+TGG | + | Chr7:75488782-75488801 | MsG0780040287.01.T01:CDS | 35.0% | |
TACATCATAGGTATTCCTGT+TGG | + | Chr7:75489113-75489132 | MsG0780040287.01.T01:CDS | 35.0% | |
TGGGAAATGATGATATCACT+TGG | + | Chr7:75486971-75486990 | MsG0780040287.01.T01:CDS | 35.0% | |
TTAAGGACTACTCATAGAGT+TGG | + | Chr7:75488566-75488585 | MsG0780040287.01.T01:intron | 35.0% | |
TTACTAATCGTTGGGAGTTA+TGG | - | Chr7:75487407-75487426 | None:intergenic | 35.0% | |
TTTCTGTAGGGTATATGGAT+TGG | + | Chr7:75489254-75489273 | MsG0780040287.01.T01:intron | 35.0% | |
! | ATACTAATCGTTGATGGAGA+TGG | + | Chr7:75488111-75488130 | MsG0780040287.01.T01:intron | 35.0% |
! | GATTCTTTTAACAGGCAACA+TGG | + | Chr7:75486720-75486739 | MsG0780040287.01.T01:CDS | 35.0% |
! | TACTCTTAGTGTTGAGAAGT+GGG | + | Chr7:75487064-75487083 | MsG0780040287.01.T01:intron | 35.0% |
! | TGTTCAGATCAACTTTTACG+TGG | + | Chr7:75488290-75488309 | MsG0780040287.01.T01:intron | 35.0% |
! | TTTTACTGCTACGCTCTTTA+GGG | - | Chr7:75487040-75487059 | None:intergenic | 35.0% |
!! | CTTAATTTGCAGTGTTAGAG+TGG | + | Chr7:75488703-75488722 | MsG0780040287.01.T01:intron | 35.0% |
AACTGACCATGCGAAAATAC+AGG | - | Chr7:75488048-75488067 | None:intergenic | 40.0% | |
ACAGTCTCAACATCAATGGA+TGG | + | Chr7:75486951-75486970 | MsG0780040287.01.T01:intron | 40.0% | |
ATGACGCATCTGTATGAGAT+AGG | - | Chr7:75487346-75487365 | None:intergenic | 40.0% | |
ATGCGACTGTTTCATGATCA+GGG | - | Chr7:75489679-75489698 | None:intergenic | 40.0% | |
ATGTGCAGGTAACTATTGCT+CGG | + | Chr7:75489624-75489643 | MsG0780040287.01.T01:intron | 40.0% | |
ATTCCTGTTGGGATTGTTCT+TGG | + | Chr7:75489125-75489144 | MsG0780040287.01.T01:CDS | 40.0% | |
CAAAACTGATTGGGACAAAC+AGG | + | Chr7:75489328-75489347 | MsG0780040287.01.T01:CDS | 40.0% | |
CACTGCAAACTTTGCATCTT+TGG | - | Chr7:75488753-75488772 | None:intergenic | 40.0% | |
CAGTCTCAACATCAATGGAT+GGG | + | Chr7:75486952-75486971 | MsG0780040287.01.T01:intron | 40.0% | |
CTTCCTTTCTGTAGGGTATA+TGG | + | Chr7:75489249-75489268 | MsG0780040287.01.T01:intron | 40.0% | |
GGGAAAAATAGGGAGTGATT+AGG | - | Chr7:75487227-75487246 | None:intergenic | 40.0% | |
TATTTCGACATGTTAGGGCA+TGG | - | Chr7:75487106-75487125 | None:intergenic | 40.0% | |
TCCAGAGTCACTTCAAAACA+AGG | + | Chr7:75488081-75488100 | MsG0780040287.01.T01:intron | 40.0% | |
TTACCAAGAACAATCCCAAC+AGG | - | Chr7:75489131-75489150 | None:intergenic | 40.0% | |
TTAGGGCAAACATGATAGCT+TGG | - | Chr7:75487209-75487228 | None:intergenic | 40.0% | |
! | ACTCTTAGTGTTGAGAAGTG+GGG | + | Chr7:75487065-75487084 | MsG0780040287.01.T01:intron | 40.0% |
! | CAGATCAACTTTTACGTGGT+TGG | + | Chr7:75488294-75488313 | MsG0780040287.01.T01:intron | 40.0% |
! | GAATTAGTACCTGAGAGTAC+AGG | - | Chr7:75488944-75488963 | None:intergenic | 40.0% |
! | GTACTCTTAGTGTTGAGAAG+TGG | + | Chr7:75487063-75487082 | MsG0780040287.01.T01:intron | 40.0% |
! | GTTTTACTGCTACGCTCTTT+AGG | - | Chr7:75487041-75487060 | None:intergenic | 40.0% |
! | TTTTACCACAAACAAGGACG+TGG | + | Chr7:75488856-75488875 | MsG0780040287.01.T01:CDS | 40.0% |
!! | AATCTCAGCCGTTGATTCAA+AGG | + | Chr7:75487298-75487317 | MsG0780040287.01.T01:intron | 40.0% |
!! | TACTCACCTTGACTTGCAAA+TGG | - | Chr7:75489160-75489179 | None:intergenic | 40.0% |
!!! | ACCTTGTTTTGAAGTGACTC+TGG | - | Chr7:75488085-75488104 | None:intergenic | 40.0% |
AGTGTTCAACCTGTACTCTC+AGG | + | Chr7:75488932-75488951 | MsG0780040287.01.T01:CDS | 45.0% | |
GATGCGACTGTTTCATGATC+AGG | - | Chr7:75489680-75489699 | None:intergenic | 45.0% | |
GGAAATGCAGGAGTTGCTAT+TGG | + | Chr7:75489044-75489063 | MsG0780040287.01.T01:intron | 45.0% | |
GTGGCAAATGAGCTTGGAAA+AGG | + | Chr7:75488722-75488741 | MsG0780040287.01.T01:CDS | 45.0% | |
GTTAGAGTGGCAAATGAGCT+TGG | + | Chr7:75488716-75488735 | MsG0780040287.01.T01:CDS | 45.0% | |
GTTGAGAAGTGGGGAATTGT+GGG | + | Chr7:75487074-75487093 | MsG0780040287.01.T01:intron | 45.0% | |
TGACAAATCACCAACAGCTG+AGG | - | Chr7:75488882-75488901 | None:intergenic | 45.0% | |
TGTTGAGAAGTGGGGAATTG+TGG | + | Chr7:75487073-75487092 | MsG0780040287.01.T01:intron | 45.0% | |
! | TCGAGTCCTGTATTTTCGCA+TGG | + | Chr7:75488039-75488058 | MsG0780040287.01.T01:intron | 45.0% |
TTGGTTTCATGGCTGCAGCA+AGG | + | Chr7:75486990-75487009 | MsG0780040287.01.T01:CDS | 50.0% | |
TTTACGTGGTTGGACCCATG+CGG | + | Chr7:75488304-75488323 | MsG0780040287.01.T01:intron | 50.0% | |
! | CAGGAGTTGCTATTGGAGCA+GGG | + | Chr7:75489051-75489070 | MsG0780040287.01.T01:intron | 50.0% |
AATGACCCGTGCTACCGCAT+GGG | - | Chr7:75488321-75488340 | None:intergenic | 55.0% | |
! | GAGTTGCTATTGGAGCAGGG+TGG | + | Chr7:75489054-75489073 | MsG0780040287.01.T01:CDS | 55.0% |
! | GCAGGAGTTGCTATTGGAGC+AGG | + | Chr7:75489050-75489069 | MsG0780040287.01.T01:intron | 55.0% |
! | TGAGGCCACGTCCTTGTTTG+TGG | - | Chr7:75488864-75488883 | None:intergenic | 55.0% |
AAGGACGTGGCCTCAGCTGT+TGG | + | Chr7:75488869-75488888 | MsG0780040287.01.T01:CDS | 60.0% | |
CAATGACCCGTGCTACCGCA+TGG | - | Chr7:75488322-75488341 | None:intergenic | 60.0% | |
CATGCGGTAGCACGGGTCAT+TGG | + | Chr7:75488320-75488339 | MsG0780040287.01.T01:intron | 60.0% | |
GTTGGACCCATGCGGTAGCA+CGG | + | Chr7:75488312-75488331 | MsG0780040287.01.T01:intron | 60.0% | |
TTGGACCCATGCGGTAGCAC+GGG | + | Chr7:75488313-75488332 | MsG0780040287.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 75486702 | 75489709 | 75486702 | ID=MsG0780040287.01;Name=MsG0780040287.01 |
Chr7 | mRNA | 75486702 | 75489709 | 75486702 | ID=MsG0780040287.01.T01;Parent=MsG0780040287.01;Name=MsG0780040287.01.T01;_AED=0.49;_eAED=0.53;_QI=0|0|0|1|1|1|6|0|218 |
Chr7 | exon | 75486702 | 75486778 | 75486702 | ID=MsG0780040287.01.T01:exon:14376;Parent=MsG0780040287.01.T01 |
Chr7 | exon | 75486955 | 75487011 | 75486955 | ID=MsG0780040287.01.T01:exon:14377;Parent=MsG0780040287.01.T01 |
Chr7 | exon | 75488715 | 75488953 | 75488715 | ID=MsG0780040287.01.T01:exon:14378;Parent=MsG0780040287.01.T01 |
Chr7 | exon | 75489054 | 75489172 | 75489054 | ID=MsG0780040287.01.T01:exon:14379;Parent=MsG0780040287.01.T01 |
Chr7 | exon | 75489263 | 75489349 | 75489263 | ID=MsG0780040287.01.T01:exon:14380;Parent=MsG0780040287.01.T01 |
Chr7 | exon | 75489632 | 75489709 | 75489632 | ID=MsG0780040287.01.T01:exon:14381;Parent=MsG0780040287.01.T01 |
Chr7 | CDS | 75486702 | 75486778 | 75486702 | ID=MsG0780040287.01.T01:cds;Parent=MsG0780040287.01.T01 |
Chr7 | CDS | 75486955 | 75487011 | 75486955 | ID=MsG0780040287.01.T01:cds;Parent=MsG0780040287.01.T01 |
Chr7 | CDS | 75488715 | 75488953 | 75488715 | ID=MsG0780040287.01.T01:cds;Parent=MsG0780040287.01.T01 |
Chr7 | CDS | 75489054 | 75489172 | 75489054 | ID=MsG0780040287.01.T01:cds;Parent=MsG0780040287.01.T01 |
Chr7 | CDS | 75489263 | 75489349 | 75489263 | ID=MsG0780040287.01.T01:cds;Parent=MsG0780040287.01.T01 |
Chr7 | CDS | 75489632 | 75489709 | 75489632 | ID=MsG0780040287.01.T01:cds;Parent=MsG0780040287.01.T01 |
Gene Sequence |
Protein sequence |