AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040699.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040699.01.T01 MTR_7g096100 87.685 203 7 1 34 218 76 278 1.17e-128 365
MsG0780040699.01.T01 MTR_7g096100 85.143 175 8 1 34 190 76 250 2.29e-106 306
MsG0780040699.01.T01 MTR_4g076080 68.473 203 17 2 34 218 73 246 9.77e-91 268
MsG0780040699.01.T01 MTR_8g064430 66.279 86 20 1 133 218 23 99 1.63e-31 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040699.01.T01 AT1G03030 64.019 214 59 1 22 217 58 271 1.08e-100 294
MsG0780040699.01.T01 AT1G03030 64.019 214 59 1 22 217 58 271 2.23e-100 293

Find 53 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAAGAACTTACTTATAATT+AGG 0.196668 7:+81336178 None:intergenic
CCAAAGCTTGTTTATGCGTT+TGG 0.301554 7:+81335749 None:intergenic
AGGTACCTCACCTCCTCTTC+TGG 0.325651 7:+81335121 None:intergenic
CACAAAATCATTATTGTAGA+AGG 0.333295 7:-81334008 MsG0780040699.01.T01:CDS
AGCTTCTTCCTTTGACTCTC+AGG 0.334016 7:-81335718 MsG0780040699.01.T01:CDS
CATCTTTGTTTGATGAGAAA+TGG 0.359249 7:-81333944 MsG0780040699.01.T01:intron
AACTATTTGCTCTTGGAAGA+TGG 0.393419 7:-81333984 MsG0780040699.01.T01:CDS
TCCTGTTCCACATCCTCATC+AGG 0.395543 7:+81340082 None:intergenic
CTGGCTGGTCCACCTGGTGC+TGG 0.399945 7:-81335798 MsG0780040699.01.T01:CDS
TCCTGATGAGGATGTGGAAC+AGG 0.407289 7:-81340083 MsG0780040699.01.T01:CDS
GTTGGCCTGGCTGGTCCACC+TGG 0.407703 7:-81335804 MsG0780040699.01.T01:CDS
GCCTCCAGACATTGCTAAGC+AGG 0.413899 7:-81332805 MsG0780040699.01.T01:CDS
TACCCCTGCTTAGCAATGTC+TGG 0.417906 7:+81332801 None:intergenic
ATGAGGAAGAGAAGAGGAAG+AGG 0.424732 7:-81340054 MsG0780040699.01.T01:CDS
CTTCTGGCATGTGCTTCCTC+AGG 0.433578 7:+81335137 None:intergenic
AGAAGGCAACTATTTGCTCT+TGG 0.443334 7:-81333991 MsG0780040699.01.T01:CDS
TTGAAGAGACATATTTCTAC+TGG 0.451360 7:-81332937 MsG0780040699.01.T01:intron
ACTATTTGCTCTTGGAAGAT+GGG 0.480636 7:-81333983 MsG0780040699.01.T01:CDS
TTTGGCTACTTCATGCGCTA+TGG 0.482885 7:+81335767 None:intergenic
CCAAACGCATAAACAAGCTT+TGG 0.487685 7:-81335749 MsG0780040699.01.T01:CDS
TGCTCTTGGAAGATGGGGTA+TGG 0.492424 7:-81333977 MsG0780040699.01.T01:CDS
TCGTTCTGAACTAGATGCTA+TGG 0.494663 7:-81335643 MsG0780040699.01.T01:CDS
TCAAAGGAAGAAGCTTTCTC+TGG 0.500898 7:+81335726 None:intergenic
AGGTTGAACCTGAGAGTCAA+AGG 0.510782 7:+81335710 None:intergenic
CAGCACCAGGTGGACCAGCC+AGG 0.511906 7:+81335799 None:intergenic
TGTGGAACAGGAAGAAGATG+AGG 0.520262 7:-81340071 MsG0780040699.01.T01:CDS
GGAATCACAATAGCGACATC+AGG 0.521886 7:+81335687 None:intergenic
CCATCATTTGACCATGGTGT+TGG 0.526860 7:-81334685 MsG0780040699.01.T01:CDS
ATAAAGATGAAAACCATCCA+TGG 0.533817 7:+81335665 None:intergenic
CCAACACCATGGTCAAATGA+TGG 0.543356 7:+81334685 None:intergenic
AAGAAGATGAGGAAGAGAAG+AGG 0.553776 7:-81340060 MsG0780040699.01.T01:CDS
GAAGCACATGCCAGAAGAGG+AGG 0.554490 7:-81335131 MsG0780040699.01.T01:CDS
CTATTTGCTCTTGGAAGATG+GGG 0.565803 7:-81333982 MsG0780040699.01.T01:CDS
GGATTTAACGACACTGACGC+TGG 0.566882 7:+81336199 None:intergenic
CTTGGAAGATGGGGTATGGA+AGG 0.567656 7:-81333973 MsG0780040699.01.T01:CDS
CCCTGCTTAGCAATGTCTGG+AGG 0.573860 7:+81332804 None:intergenic
GCTATTGTGATTCCCATGGA+TGG 0.574999 7:-81335678 MsG0780040699.01.T01:CDS
TGATGAGATATATGATACAT+TGG 0.576038 7:-81336239 MsG0780040699.01.T01:CDS
CCTCCAGACATTGCTAAGCA+GGG 0.583752 7:-81332804 MsG0780040699.01.T01:CDS
GAGGAAGCACATGCCAGAAG+AGG 0.600083 7:-81335134 MsG0780040699.01.T01:CDS
ACAAAGATATCATCTTCCAC+TGG 0.608247 7:+81334658 None:intergenic
TAAAGATGAAAACCATCCAT+GGG 0.610783 7:+81335666 None:intergenic
ACATGCCAGAAGAGGAGGTG+AGG 0.614076 7:-81335126 MsG0780040699.01.T01:intron
TGAAATTCCTGATGAGGATG+TGG 0.617260 7:-81340089 MsG0780040699.01.T01:CDS
TGTCGCTATTGTGATTCCCA+TGG 0.625524 7:-81335682 MsG0780040699.01.T01:CDS
CCATGGTGTTGGAGATCCAG+TGG 0.635968 7:-81334674 MsG0780040699.01.T01:CDS
CTCCAGACATTGCTAAGCAG+GGG 0.637376 7:-81332803 MsG0780040699.01.T01:CDS
ATCACAATAGCGACATCAGG+AGG 0.639772 7:+81335690 None:intergenic
TATGCACCATCATTTGACCA+TGG 0.646090 7:-81334691 MsG0780040699.01.T01:CDS
TTCTGAACTAGATGCTATGG+AGG 0.652140 7:-81335640 MsG0780040699.01.T01:intron
TGATGCTGAAATTCCTGATG+AGG 0.663587 7:-81340095 MsG0780040699.01.T01:CDS
TTTAACGACACTGACGCTGG+AGG 0.696672 7:+81336202 None:intergenic
CCACTGGATCTCCAACACCA+TGG 0.697435 7:+81334674 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAATAATAAACAAATAA+TGG - Chr7:81333236-81333255 MsG0780040699.01.T01:intron 10.0%
!! AATCAAATAAAAATTCAAAA+TGG + Chr7:81336205-81336224 None:intergenic 10.0%
!! TAAAACATCTATATTAATTA+TGG + Chr7:81335222-81335241 None:intergenic 10.0%
!!! AAATTTTGACATAATTTTAA+TGG + Chr7:81338449-81338468 None:intergenic 10.0%
!!! AACTCATTTTTTAAAAAAAA+TGG + Chr7:81335799-81335818 None:intergenic 10.0%
!!! ATTTTTAACATTCTTATATA+GGG - Chr7:81335656-81335675 MsG0780040699.01.T01:CDS 10.0%
!!! GATTAATAATATTGATTTAA+CGG + Chr7:81335264-81335283 None:intergenic 10.0%
!!! TAAATTATTTGAGTTTTATA+CGG + Chr7:81335299-81335318 None:intergenic 10.0%
!!! TGAAAAAAATGATTTTTTTA+AGG - Chr7:81335963-81335982 MsG0780040699.01.T01:intron 10.0%
!!! TGTTTTAAATAAACAAATAA+TGG - Chr7:81333068-81333087 MsG0780040699.01.T01:intron 10.0%
!!! TTAAAAAAAATGGATTTTTA+TGG + Chr7:81335789-81335808 None:intergenic 10.0%
!! ACTAGATTAGATTAAATTAT+GGG + Chr7:81336030-81336049 None:intergenic 15.0%
!! CTATATAAGAATGTTAAAAA+TGG + Chr7:81335657-81335676 None:intergenic 15.0%
!! TTATTATTATTATATCCTGT+AGG - Chr7:81338005-81338024 MsG0780040699.01.T01:intron 15.0%
!!! AAGGAAAAAAATAGATTTTT+TGG - Chr7:81335982-81336001 MsG0780040699.01.T01:intron 15.0%
!!! AGGAAAAAAATAGATTTTTT+GGG - Chr7:81335983-81336002 MsG0780040699.01.T01:intron 15.0%
!!! ATAAATCACATTATTTTAGA+GGG + Chr7:81338071-81338090 None:intergenic 15.0%
!!! ATTTCTGTATTTTTTTCAAT+AGG - Chr7:81333463-81333482 MsG0780040699.01.T01:intron 15.0%
!!! CATTTTTAACATTCTTATAT+AGG - Chr7:81335655-81335674 MsG0780040699.01.T01:CDS 15.0%
!!! TAATTTGAGACAATTTTTTT+AGG + Chr7:81335106-81335125 None:intergenic 15.0%
!!! TAATTTTAATGGTAAAAATC+TGG + Chr7:81338438-81338457 None:intergenic 15.0%
!!! TTACTTTTTTTGAAAAAAGA+TGG + Chr7:81338807-81338826 None:intergenic 15.0%
!!! TTTCTGTATTTTTTTCAATA+GGG - Chr7:81333464-81333483 MsG0780040699.01.T01:intron 15.0%
!! AAAAGATAAATTATGTGCTA+CGG - Chr7:81332908-81332927 MsG0780040699.01.T01:intron 20.0%
!! AATAATGTGATTTATCTCTA+AGG - Chr7:81338076-81338095 MsG0780040699.01.T01:intron 20.0%
!! ATAATGTGATTTATCTCTAA+GGG - Chr7:81338077-81338096 MsG0780040699.01.T01:intron 20.0%
!! ATAATTCCAAACAAATAAGT+AGG + Chr7:81339516-81339535 None:intergenic 20.0%
!! ATGATTGAAATGCAATAATA+AGG + Chr7:81335182-81335201 None:intergenic 20.0%
!! CACTAGATTAGATTAAATTA+TGG + Chr7:81336031-81336050 None:intergenic 20.0%
!! CTACAAAATTCTTAAATCAT+AGG - Chr7:81333933-81333952 MsG0780040699.01.T01:intron 20.0%
!! GGAAGATTAAACTAATATTA+AGG + Chr7:81337056-81337075 None:intergenic 20.0%
!! GGATAAAACTTTAATTATCA+TGG + Chr7:81334319-81334338 None:intergenic 20.0%
!! GTAAGAACTTACTTATAATT+AGG + Chr7:81336734-81336753 None:intergenic 20.0%
!! TAAATATATTGAAACTGTGA+AGG + Chr7:81339803-81339822 None:intergenic 20.0%
!! TAATTCCAAACAAATAAGTA+GGG + Chr7:81339515-81339534 None:intergenic 20.0%
!! TACATAACGTTATTAACTAT+CGG + Chr7:81333139-81333158 None:intergenic 20.0%
!! TCTATATTAATTATGGTTAG+TGG + Chr7:81335215-81335234 None:intergenic 20.0%
!! TGATTGAAATGCAATAATAA+GGG + Chr7:81335181-81335200 None:intergenic 20.0%
!! TTAATAAAATGCTGACAAAT+GGG + Chr7:81338311-81338330 None:intergenic 20.0%
!! TTACATTGAAAAAGAAAAAG+TGG + Chr7:81338619-81338638 None:intergenic 20.0%
!! TTCCTAAAATTAGAACAAAT+AGG - Chr7:81334715-81334734 MsG0780040699.01.T01:intron 20.0%
!!! AAAATATAAAAAAGCATCAC+AGG - Chr7:81335416-81335435 MsG0780040699.01.T01:intron 20.0%
!!! ATTATTTTACAAGTTAAACC+AGG + Chr7:81339358-81339377 None:intergenic 20.0%
!!! ATTTATCTTTTTAGTTCGTA+CGG + Chr7:81332899-81332918 None:intergenic 20.0%
!!! ATTTGTTCTAATTTTAGGAA+TGG + Chr7:81334715-81334734 None:intergenic 20.0%
!!! CACAACAAATATTTTTTGTA+TGG + Chr7:81337602-81337621 None:intergenic 20.0%
!!! GAAGTTAGTTTTATATAAAG+CGG - Chr7:81335527-81335546 MsG0780040699.01.T01:intron 20.0%
!!! GATAAATCACATTATTTTAG+AGG + Chr7:81338072-81338091 None:intergenic 20.0%
!!! TAAATCACATTATTTTAGAG+GGG + Chr7:81338070-81338089 None:intergenic 20.0%
!!! TATAAGTAAGTTCTTACTTT+TGG - Chr7:81336737-81336756 MsG0780040699.01.T01:intron 20.0%
!!! TCATATTTTCAAAACAAACT+AGG + Chr7:81333539-81333558 None:intergenic 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + Chr7:81335946-81335965 None:intergenic 20.0%
!!! TCTATTTTTTTTCAACAACA+AGG + Chr7:81335844-81335863 None:intergenic 20.0%
!!! TGGAATCAATATTTTTATGA+AGG + Chr7:81333605-81333624 None:intergenic 20.0%
!!! TTATTTTACAAGTTAAACCA+GGG + Chr7:81339357-81339376 None:intergenic 20.0%
!!! TTCTGTATTTTTTTCAATAG+GGG - Chr7:81333465-81333484 MsG0780040699.01.T01:intron 20.0%
!!! TTTGTTCTAATTTTAGGAAT+GGG + Chr7:81334714-81334733 None:intergenic 20.0%
!!! TTTTTTTTTGTGATCAAAGA+GGG - Chr7:81333801-81333820 MsG0780040699.01.T01:intron 20.0%
! AAAGATAAATTATGTGCTAC+GGG - Chr7:81332909-81332928 MsG0780040699.01.T01:intron 25.0%
! AAATAATGGCCAACAAAAAA+CGG - Chr7:81333082-81333101 MsG0780040699.01.T01:intron 25.0%
! AACAAAATTAATGACTGCTA+CGG + Chr7:81338675-81338694 None:intergenic 25.0%
! AACAACCTATCATATTTAGT+TGG - Chr7:81339750-81339769 MsG0780040699.01.T01:intron 25.0%
! AATTCCAAACAAATAAGTAG+GGG + Chr7:81339514-81339533 None:intergenic 25.0%
! ACAACCTATCATATTTAGTT+GGG - Chr7:81339751-81339770 MsG0780040699.01.T01:intron 25.0%
! ACTAAATATGATAGGTTGTT+TGG + Chr7:81339750-81339769 None:intergenic 25.0%
! AGAATAGGAACAAACAAATT+AGG + Chr7:81339905-81339924 None:intergenic 25.0%
! ATAACAACGTGTTTACAAAT+AGG + Chr7:81334905-81334924 None:intergenic 25.0%
! ATATGAACAATGAAATGTAC+TGG + Chr7:81337345-81337364 None:intergenic 25.0%
! ATGAATGCAAATGACAAATA+AGG + Chr7:81334169-81334188 None:intergenic 25.0%
! CAACAAAAAACGGTTATATT+AGG - Chr7:81333092-81333111 MsG0780040699.01.T01:intron 25.0%
! CAATAAACCTTGAAAAGAAT+AGG + Chr7:81339920-81339939 None:intergenic 25.0%
! CACAAAATCATTATTGTAGA+AGG - Chr7:81338901-81338920 MsG0780040699.01.T01:intron 25.0%
! CCTTAAAATGAAAAGCTATT+AGG + Chr7:81335884-81335903 None:intergenic 25.0%
! CTAAATATGATAGGTTGTTT+GGG + Chr7:81339749-81339768 None:intergenic 25.0%
! CTAATGTATGAACATCAATT+AGG + Chr7:81339490-81339509 None:intergenic 25.0%
! CTAATTGATGTTCATACATT+AGG - Chr7:81339488-81339507 MsG0780040699.01.T01:intron 25.0%
! GAAAACTTCTCATTAATAGA+TGG + Chr7:81338701-81338720 None:intergenic 25.0%
! GGAAGAAATCTTTAATTACA+AGG + Chr7:81335041-81335060 None:intergenic 25.0%
! GTTAATAAAATGCTGACAAA+TGG + Chr7:81338312-81338331 None:intergenic 25.0%
! TAACACTCAAAAAGAAGAAA+TGG - Chr7:81338386-81338405 MsG0780040699.01.T01:intron 25.0%
! TAACATCAATTTAGTCTACA+GGG + Chr7:81337515-81337534 None:intergenic 25.0%
! TAATAATCTCTTCAAGGTAT+CGG - Chr7:81336377-81336396 MsG0780040699.01.T01:intron 25.0%
! TAATGGTATTATCATGTTGT+TGG - Chr7:81337956-81337975 MsG0780040699.01.T01:intron 25.0%
! TATCATAACGATTAGAAACT+TGG - Chr7:81334110-81334129 MsG0780040699.01.T01:intron 25.0%
! TATGAACAATGAAATGTACT+GGG + Chr7:81337344-81337363 None:intergenic 25.0%
! TCAAAATTTGATTGAGCAAA+TGG - Chr7:81336117-81336136 MsG0780040699.01.T01:intron 25.0%
! TCATTCGCTTATACAAATAT+TGG - Chr7:81334753-81334772 MsG0780040699.01.T01:intron 25.0%
! TGAACTCTCTATTGAAAATT+CGG - Chr7:81339054-81339073 MsG0780040699.01.T01:intron 25.0%
! TGATGAGATATATGATACAT+TGG - Chr7:81336670-81336689 MsG0780040699.01.T01:intron 25.0%
! TGATGCTGAAAAACATATAT+TGG + Chr7:81339859-81339878 None:intergenic 25.0%
! TGCCTTGAAAATTATACTTA+TGG - Chr7:81339106-81339125 MsG0780040699.01.T01:intron 25.0%
! TGTAGCTAAAGATATAGTAA+GGG + Chr7:81335338-81335357 None:intergenic 25.0%
! TTCTAATCGTTATGATAACA+AGG + Chr7:81334107-81334126 None:intergenic 25.0%
! TTGACAGCATTCATTAATTT+GGG + Chr7:81335460-81335479 None:intergenic 25.0%
! TTGTAGCTAAAGATATAGTA+AGG + Chr7:81335339-81335358 None:intergenic 25.0%
!! ACGGATGAAGTAATTTTTAA+TGG + Chr7:81335062-81335081 None:intergenic 25.0%
!! ACGTTTCTTATATTTTCCAT+TGG - Chr7:81339006-81339025 MsG0780040699.01.T01:intron 25.0%
!! AGAATTTTCAAAAGAGTAGT+CGG + Chr7:81339087-81339106 None:intergenic 25.0%
!! CCTAATAGCTTTTCATTTTA+AGG - Chr7:81335881-81335900 MsG0780040699.01.T01:intron 25.0%
!! CTCCTATTTGTTCTAATTTT+AGG + Chr7:81334720-81334739 None:intergenic 25.0%
!! GTCCATAAGTATAATTTTCA+AGG + Chr7:81339111-81339130 None:intergenic 25.0%
!! GTGGAAAGTTGATTTATAAT+TGG + Chr7:81338600-81338619 None:intergenic 25.0%
!! TTAATTTTATTGCTTTGCAG+TGG - Chr7:81336644-81336663 MsG0780040699.01.T01:intron 25.0%
!! TTTGTCTTAATCATGCATTT+TGG - Chr7:81334840-81334859 MsG0780040699.01.T01:intron 25.0%
!!! AAAAGCATTAATCTTTGGAT+TGG - Chr7:81337848-81337867 MsG0780040699.01.T01:intron 25.0%
!!! AATGGATTTTTATGGATAGT+AGG + Chr7:81335781-81335800 None:intergenic 25.0%
!!! AGTTTGTTTGTTTTCTTCTT+GGG + Chr7:81333832-81333851 None:intergenic 25.0%
!!! ATAAAGGCATTGATTTATAG+AGG - Chr7:81339297-81339316 MsG0780040699.01.T01:intron 25.0%
!!! ATATTTTTTGTATGGAAGAG+AGG + Chr7:81337594-81337613 None:intergenic 25.0%
!!! CTAATATAACCGTTTTTTGT+TGG + Chr7:81333094-81333113 None:intergenic 25.0%
!!! CTCTTTTTTGATGATATATC+TGG + Chr7:81333891-81333910 None:intergenic 25.0%
!!! CTTAGAAAAGCATTAATCTT+TGG - Chr7:81337843-81337862 MsG0780040699.01.T01:intron 25.0%
!!! CTTTTTTTTTGTGATCAAAG+AGG - Chr7:81333800-81333819 MsG0780040699.01.T01:intron 25.0%
!!! GACAACTTTTAAAACTTTCA+AGG + Chr7:81339032-81339051 None:intergenic 25.0%
!!! GATTAATGCTTTTCTAAGAA+TGG + Chr7:81337841-81337860 None:intergenic 25.0%
!!! GTTTTTTTTTTGTCGTTTTC+TGG + Chr7:81333421-81333440 None:intergenic 25.0%
!!! TAGTTTGTTTGTTTTCTTCT+TGG + Chr7:81333833-81333852 None:intergenic 25.0%
!!! TCTGTATTTTTTTCAATAGG+GGG - Chr7:81333466-81333485 MsG0780040699.01.T01:intron 25.0%
!!! TGCATTTTGGAAATATTTCA+TGG - Chr7:81334853-81334872 MsG0780040699.01.T01:intron 25.0%
!!! TTAACTATCGGTTTTTTACT+CGG + Chr7:81333127-81333146 None:intergenic 25.0%
!!! TTGTTCTAATTTTAGGAATG+GGG + Chr7:81334713-81334732 None:intergenic 25.0%
!!! TTTATCTTTTTAGTTCGTAC+GGG + Chr7:81332898-81332917 None:intergenic 25.0%
!!! TTTTTGATAATAGAATCCTG+AGG - Chr7:81337756-81337775 MsG0780040699.01.T01:intron 25.0%
AACAAAAACTACTTTCTCCT+CGG + Chr7:81332966-81332985 None:intergenic 30.0%
AATATTCAACAGCACACAAA+AGG + Chr7:81336838-81336857 None:intergenic 30.0%
ACAAAATTAATGACTGCTAC+GGG + Chr7:81338674-81338693 None:intergenic 30.0%
AGATAGTGAGATTCTGAATA+CGG - Chr7:81334043-81334062 MsG0780040699.01.T01:intron 30.0%
AGCTAATAATCATCTGAATG+TGG + Chr7:81339148-81339167 None:intergenic 30.0%
ATAAAGATGAAAACCATCCA+TGG + Chr7:81337247-81337266 None:intergenic 30.0%
ATAGTTTACATTGGCGTAAA+TGG - Chr7:81332937-81332956 MsG0780040699.01.T01:intron 30.0%
ATTGTTAAGATACTCACTGA+AGG + Chr7:81338280-81338299 None:intergenic 30.0%
CAAGAGTAATAATCTCTTCA+AGG - Chr7:81336371-81336390 MsG0780040699.01.T01:intron 30.0%
CACATGAATAACAAAGACTT+TGG + Chr7:81334565-81334584 None:intergenic 30.0%
CATCTAATATTAGAGTAGGT+TGG + Chr7:81338513-81338532 None:intergenic 30.0%
CTCACATCTAATATTAGAGT+AGG + Chr7:81338517-81338536 None:intergenic 30.0%
CTGTCAAATATCAACTATAG+CGG + Chr7:81336934-81336953 None:intergenic 30.0%
CTTGACAGCATTCATTAATT+TGG + Chr7:81335461-81335480 None:intergenic 30.0%
GAAAGCTAAGCTAGTAAAAT+TGG - Chr7:81336766-81336785 MsG0780040699.01.T01:intron 30.0%
GAACAGATAACAAATAGTTC+TGG + Chr7:81333625-81333644 None:intergenic 30.0%
GAGTATCTTAACAATACGAT+GGG - Chr7:81338285-81338304 MsG0780040699.01.T01:intron 30.0%
GAGTTTGTCTTCTCATTTAA+GGG - Chr7:81334948-81334967 MsG0780040699.01.T01:intron 30.0%
GTAACATCAATTTAGTCTAC+AGG + Chr7:81337516-81337535 None:intergenic 30.0%
GTTATCTTAAAACCTTTGCA+AGG - Chr7:81338487-81338506 MsG0780040699.01.T01:intron 30.0%
TAAAGATGAAAACCATCCAT+GGG + Chr7:81337246-81337265 None:intergenic 30.0%
TAATTATCATGGAGCTTACA+AGG + Chr7:81334308-81334327 None:intergenic 30.0%
TACTTCAACTTATCAACTCT+AGG + Chr7:81337374-81337393 None:intergenic 30.0%
TAGGGTTATACTCAAAGAAT+TGG + Chr7:81334226-81334245 None:intergenic 30.0%
TCCTAGATTTACCATAGAAT+TGG + Chr7:81338103-81338122 None:intergenic 30.0%
TCTAATGGTAGTTGGTTATA+GGG + Chr7:81334244-81334263 None:intergenic 30.0%
TGAGTATCTTAACAATACGA+TGG - Chr7:81338284-81338303 MsG0780040699.01.T01:intron 30.0%
TGAGTTTGTCTTCTCATTTA+AGG - Chr7:81334947-81334966 MsG0780040699.01.T01:intron 30.0%
TGGTGAAACATAATTCTTCA+GGG - Chr7:81338188-81338207 MsG0780040699.01.T01:intron 30.0%
TGTTTGATGAGAAATGGTAT+TGG - Chr7:81338971-81338990 MsG0780040699.01.T01:intron 30.0%
TTATCCATGAGAGTTTATTC+AGG - Chr7:81339380-81339399 MsG0780040699.01.T01:intron 30.0%
TTGGTGAAACATAATTCTTC+AGG - Chr7:81338187-81338206 MsG0780040699.01.T01:intron 30.0%
TTTCCTTTCTTCCTTTATGT+AGG - Chr7:81338878-81338897 MsG0780040699.01.T01:intron 30.0%
! AAAACTAACTAGCCTAAATC+AGG - Chr7:81334639-81334658 MsG0780040699.01.T01:intron 30.0%
! AATGACCCACTTTCAATTTT+TGG + Chr7:81333446-81333465 None:intergenic 30.0%
! AGAATGGTGTTTGAAATTGA+TGG + Chr7:81337825-81337844 None:intergenic 30.0%
! AGAATTTTGTAGTCTCTCAT+AGG + Chr7:81333925-81333944 None:intergenic 30.0%
! ATGACCCACTTTCAATTTTT+GGG + Chr7:81333445-81333464 None:intergenic 30.0%
! ATGATTTTGTGCCTACATAA+AGG + Chr7:81338892-81338911 None:intergenic 30.0%
! CATCTTTGTTTGATGAGAAA+TGG - Chr7:81338965-81338984 MsG0780040699.01.T01:intron 30.0%
! CATGTTTGAGATTCTAAATG+CGG - Chr7:81336458-81336477 MsG0780040699.01.T01:intron 30.0%
! CTTTTCTCTTTCTAATCGTA+GGG + Chr7:81334602-81334621 None:intergenic 30.0%
! GAATGGTGTTTGAAATTGAT+GGG + Chr7:81337824-81337843 None:intergenic 30.0%
! GAATTTTGTAGTCTCTCATA+GGG + Chr7:81333924-81333943 None:intergenic 30.0%
! GTTTGTTCCTATTCTTTTCA+AGG - Chr7:81339910-81339929 MsG0780040699.01.T01:intron 30.0%
! TCTTTTCTCTTTCTAATCGT+AGG + Chr7:81334603-81334622 None:intergenic 30.0%
! TTGAAGAGACATATTTCTAC+TGG - Chr7:81339972-81339991 MsG0780040699.01.T01:intron 30.0%
! TTTAAAACTTTCAAGGCCAA+TGG + Chr7:81339025-81339044 None:intergenic 30.0%
!! AATTGATGGGTTATATGAAG+AGG + Chr7:81337811-81337830 None:intergenic 30.0%
!! CAAAGTCTTTGTTATTCATG+TGG - Chr7:81334563-81334582 MsG0780040699.01.T01:intron 30.0%
!! CGAGTGTTTGATTTTGTTAT+CGG + Chr7:81336267-81336286 None:intergenic 30.0%
!! GAAAAACATATATTGGCCTT+AGG + Chr7:81339852-81339871 None:intergenic 30.0%
!! TAATTTTGCAGAAAAGTGCA+TGG + Chr7:81340004-81340023 None:intergenic 30.0%
!!! CTGCTTTGTTTATTGCATTT+TGG - Chr7:81338168-81338187 MsG0780040699.01.T01:intron 30.0%
!!! GGTCAACTTTGGAATTTTTT+TGG - Chr7:81333487-81333506 MsG0780040699.01.T01:intron 30.0%
!!! TATTTCGTACCATTTTTTCG+CGG - Chr7:81336507-81336526 MsG0780040699.01.T01:intron 30.0%
!!! TGGAATTTTTTTGGCAAACA+GGG - Chr7:81333496-81333515 MsG0780040699.01.T01:intron 30.0%
!!! TTCTAAAGTTTTCAACCTAC+AGG + Chr7:81338023-81338042 None:intergenic 30.0%
!!! TTGCTTGTCAGATTTTTTGT+TGG - Chr7:81337087-81337106 MsG0780040699.01.T01:intron 30.0%
!!! TTGGAATTTTTTTGGCAAAC+AGG - Chr7:81333495-81333514 MsG0780040699.01.T01:intron 30.0%
AAAATGAATTCCCTATGCAG+AGG + Chr7:81340041-81340060 None:intergenic 35.0%
AAACCCCCAAAAATTGAAAG+TGG - Chr7:81333437-81333456 MsG0780040699.01.T01:intron 35.0%
AACAAGTCGTTGTAGTATAG+TGG + Chr7:81335624-81335643 None:intergenic 35.0%
AACCCCCAAAAATTGAAAGT+GGG - Chr7:81333438-81333457 MsG0780040699.01.T01:intron 35.0%
AACTATTTGCTCTTGGAAGA+TGG - Chr7:81338925-81338944 MsG0780040699.01.T01:intron 35.0%
AATTAGGTAAACCAGTATCC+TGG + Chr7:81339889-81339908 None:intergenic 35.0%
ACAAAGATATCATCTTCCAC+TGG + Chr7:81338254-81338273 None:intergenic 35.0%
ACAGCCCAACTAAATATGAT+AGG + Chr7:81339758-81339777 None:intergenic 35.0%
ACTATTTGCTCTTGGAAGAT+GGG - Chr7:81338926-81338945 MsG0780040699.01.T01:intron 35.0%
AGAATCTGAGAGTTCATGTA+AGG - Chr7:81337921-81337940 MsG0780040699.01.T01:intron 35.0%
AGACAAAATCCCTAAAAGTG+TGG - Chr7:81334674-81334693 MsG0780040699.01.T01:CDS 35.0%
AGATGACACTTATTGTGAGA+CGG + Chr7:81335081-81335100 None:intergenic 35.0%
AGCAAGAGACACTTTAAACA+GGG - Chr7:81339688-81339707 MsG0780040699.01.T01:intron 35.0%
AGGTTCCATGGATGAAATAA+AGG - Chr7:81339281-81339300 MsG0780040699.01.T01:intron 35.0%
ATATATTCCCAGCATGAAAC+AGG + Chr7:81339175-81339194 None:intergenic 35.0%
ATCAGATTTATCCAGGATAC+TGG - Chr7:81339875-81339894 MsG0780040699.01.T01:intron 35.0%
ATGTGATAAAGCAACAGAGT+TGG - Chr7:81337449-81337468 MsG0780040699.01.T01:intron 35.0%
ATTGAAAATACACACGTTCG+AGG - Chr7:81338557-81338576 MsG0780040699.01.T01:intron 35.0%
ATTTCAACTTCCTCTGCATA+GGG - Chr7:81340028-81340047 MsG0780040699.01.T01:intron 35.0%
CAACAAATAGTGCACTAGAA+AGG + Chr7:81339587-81339606 None:intergenic 35.0%
CAGAATCTCACTATCTTACA+TGG + Chr7:81334039-81334058 None:intergenic 35.0%
CATGGAACCTTTATCTACTT+GGG + Chr7:81339271-81339290 None:intergenic 35.0%
CTAAAGTTGTATGCAACAGA+AGG + Chr7:81337302-81337321 None:intergenic 35.0%
CTATGTCTTCCCATTAAAAG+AGG - Chr7:81334384-81334403 MsG0780040699.01.T01:intron 35.0%
CTCTAATGGTAGTTGGTTAT+AGG + Chr7:81334245-81334264 None:intergenic 35.0%
GAATCCTGAATAAACTCTCA+TGG + Chr7:81339387-81339406 None:intergenic 35.0%
GCCAATTCTATGGTAAATCT+AGG - Chr7:81338099-81338118 MsG0780040699.01.T01:intron 35.0%
TAACTAACACACCTCTATCT+TGG + Chr7:81334073-81334092 None:intergenic 35.0%
TAAGGCTTACGAGTTTGTAA+TGG - Chr7:81337939-81337958 MsG0780040699.01.T01:intron 35.0%
TATAAAAAAATCGCCGTTGC+CGG - Chr7:81335557-81335576 MsG0780040699.01.T01:intron 35.0%
TATTTCAACTTCCTCTGCAT+AGG - Chr7:81340027-81340046 MsG0780040699.01.T01:intron 35.0%
TCAGAGTACATTTCTATTCC+TGG - Chr7:81339624-81339643 MsG0780040699.01.T01:intron 35.0%
TCTATTGCACTATTGTGTAG+CGG + Chr7:81336910-81336929 None:intergenic 35.0%
TGACAAGCAACATAGATACT+AGG + Chr7:81337077-81337096 None:intergenic 35.0%
TGGTTACTCTGCTACAAAAA+AGG - Chr7:81334987-81335006 MsG0780040699.01.T01:intron 35.0%
TGTGATAAAGCAACAGAGTT+GGG - Chr7:81337450-81337469 MsG0780040699.01.T01:intron 35.0%
TGTTGCAAGTAGCAACTAAT+TGG + Chr7:81338838-81338857 None:intergenic 35.0%
TTAAACCAGGGAGGATTTAT+AGG + Chr7:81339345-81339364 None:intergenic 35.0%
TTCAGTTTCACCATTGTTGA+AGG - Chr7:81336089-81336108 MsG0780040699.01.T01:intron 35.0%
TTTCAGCATCAGATTTATCC+AGG - Chr7:81339868-81339887 MsG0780040699.01.T01:intron 35.0%
! AAACGCGTATCTTTGGTAAT+GGG + Chr7:81335505-81335524 None:intergenic 35.0%
! AAAGACTTTGGAGAACAAGA+TGG + Chr7:81334553-81334572 None:intergenic 35.0%
! AAAGTTTGTCGTTGGTTGAT+AGG - Chr7:81334808-81334827 MsG0780040699.01.T01:intron 35.0%
! AAGACTTTGGAGAACAAGAT+GGG + Chr7:81334552-81334571 None:intergenic 35.0%
! ACAAACTTTCATGTGGATTG+CGG + Chr7:81334797-81334816 None:intergenic 35.0%
! AGTGACACAATTGTGTTGAT+TGG + Chr7:81333987-81334006 None:intergenic 35.0%
! CAATGCCTTTATTTCATCCA+TGG + Chr7:81339289-81339308 None:intergenic 35.0%
! CTCTTTTAATGGGAAGACAT+AGG + Chr7:81334386-81334405 None:intergenic 35.0%
! TCTTTTCCCTTTCCATCTAT+AGG - Chr7:81340078-81340097 MsG0780040699.01.T01:CDS 35.0%
! TGACCCACTTTCAATTTTTG+GGG + Chr7:81333444-81333463 None:intergenic 35.0%
! TTTAGAGCCCAAGTAGATAA+AGG - Chr7:81339261-81339280 MsG0780040699.01.T01:intron 35.0%
! TTTGAAGCTTCCTTCAACAA+TGG + Chr7:81336102-81336121 None:intergenic 35.0%
! TTTTACAAGTTAAACCAGGG+AGG + Chr7:81339354-81339373 None:intergenic 35.0%
! TTTTTCCTATAAATCCTCCC+TGG - Chr7:81339337-81339356 MsG0780040699.01.T01:intron 35.0%
!! AACTCTGTTGCTTTATCACA+TGG + Chr7:81337450-81337469 None:intergenic 35.0%
!! ACACAATTGTGTTGATTGGT+TGG + Chr7:81333983-81334002 None:intergenic 35.0%
!! ACAGGTTTTATCTGCTGAAA+AGG - Chr7:81336532-81336551 MsG0780040699.01.T01:intron 35.0%
!! GAAAGTATTCTCAAAGAGAG+TGG + Chr7:81334340-81334359 None:intergenic 35.0%
!! GATCATGTTCAAGTTGTAGA+GGG - Chr7:81336554-81336573 MsG0780040699.01.T01:intron 35.0%
!! GGTAATGGGCAAAGATAATT+TGG + Chr7:81335491-81335510 None:intergenic 35.0%
!!! ATTTTTTTGGCAAACAGGGT+CGG - Chr7:81333500-81333519 MsG0780040699.01.T01:intron 35.0%
!!! GATCTTTTTCGAGACTCTAA+TGG + Chr7:81334259-81334278 None:intergenic 35.0%
AAATACTGACCCCTTCATGA+TGG + Chr7:81338412-81338431 None:intergenic 40.0%
AACTCTCAGATTCTTGAGAC+AGG + Chr7:81337915-81337934 None:intergenic 40.0%
AAGAAATGGCCATCATGAAG+GGG - Chr7:81338400-81338419 MsG0780040699.01.T01:intron 40.0%
AAGAAGATGAGGAAGAGAAG+AGG - Chr7:81332849-81332868 MsG0780040699.01.T01:intron 40.0%
ACCAACGACAAACTTTCATG+TGG + Chr7:81334804-81334823 None:intergenic 40.0%
ACTTCAGAAACGCGTATCTT+TGG + Chr7:81335512-81335531 None:intergenic 40.0%
AGAAGAAATGGCCATCATGA+AGG - Chr7:81338398-81338417 MsG0780040699.01.T01:intron 40.0%
AGAAGGCAACTATTTGCTCT+TGG - Chr7:81338918-81338937 MsG0780040699.01.T01:intron 40.0%
AGAGTAACCATAAGCTCACT+TGG + Chr7:81334977-81334996 None:intergenic 40.0%
AGCCATCATAAGAATCACCT+GGG - Chr7:81334430-81334449 MsG0780040699.01.T01:intron 40.0%
ATAAAAAAATCGCCGTTGCC+GGG - Chr7:81335558-81335577 MsG0780040699.01.T01:intron 40.0%
ATCATAAGAATCACCTGGGA+TGG - Chr7:81334434-81334453 MsG0780040699.01.T01:intron 40.0%
ATCCCAGGTGATTCTTATGA+TGG + Chr7:81334435-81334454 None:intergenic 40.0%
CAACATAAGCCATATTGTCC+AGG + Chr7:81339653-81339672 None:intergenic 40.0%
CAGCAAGAGACACTTTAAAC+AGG - Chr7:81339687-81339706 MsG0780040699.01.T01:intron 40.0%
CCAAACGCATAAACAAGCTT+TGG - Chr7:81337160-81337179 MsG0780040699.01.T01:intron 40.0%
CCAAGTAGATAAAGGTTCCA+TGG - Chr7:81339269-81339288 MsG0780040699.01.T01:intron 40.0%
CCATGGAACCTTTATCTACT+TGG + Chr7:81339272-81339291 None:intergenic 40.0%
CTAAGATGCATTTGTTCTCC+AGG - Chr7:81334483-81334502 MsG0780040699.01.T01:intron 40.0%
CTATTTGCTCTTGGAAGATG+GGG - Chr7:81338927-81338946 MsG0780040699.01.T01:intron 40.0%
CTGATTATGCCTACACATGT+GGG - Chr7:81335010-81335029 MsG0780040699.01.T01:intron 40.0%
GAAACGCGTATCTTTGGTAA+TGG + Chr7:81335506-81335525 None:intergenic 40.0%
GAAATATGCAACCTAGCCTA+AGG - Chr7:81339833-81339852 MsG0780040699.01.T01:intron 40.0%
GAAGAAATGGCCATCATGAA+GGG - Chr7:81338399-81338418 MsG0780040699.01.T01:intron 40.0%
GATAAATTATGTGCTACGGG+AGG - Chr7:81332912-81332931 MsG0780040699.01.T01:intron 40.0%
GTGCCTACATAAAGGAAGAA+AGG + Chr7:81338884-81338903 None:intergenic 40.0%
TAAAGCAACAGAGTTGGGAT+AGG - Chr7:81337455-81337474 MsG0780040699.01.T01:intron 40.0%
TAGCCATCATAAGAATCACC+TGG - Chr7:81334429-81334448 MsG0780040699.01.T01:intron 40.0%
TAGGCCCCTACTTATTTGTT+TGG - Chr7:81339507-81339526 MsG0780040699.01.T01:intron 40.0%
TAGTGAGATTCTGAATACGG+AGG - Chr7:81334046-81334065 MsG0780040699.01.T01:intron 40.0%
TATGCACCATCATTTGACCA+TGG - Chr7:81338218-81338237 MsG0780040699.01.T01:intron 40.0%
TCAAAGGAAGAAGCTTTCTC+TGG + Chr7:81337186-81337205 None:intergenic 40.0%
TCCACATGAAAGTTTGTCGT+TGG - Chr7:81334800-81334819 MsG0780040699.01.T01:intron 40.0%
TGAAATTCCTGATGAGGATG+TGG - Chr7:81332820-81332839 MsG0780040699.01.T01:intron 40.0%
TGAGATTCTAAATGCGGTGA+AGG - Chr7:81336464-81336483 MsG0780040699.01.T01:intron 40.0%
TGATGCTGAAATTCCTGATG+AGG - Chr7:81332814-81332833 MsG0780040699.01.T01:intron 40.0%
TGGAGTCACTATCAACTATG+AGG - Chr7:81334130-81334149 MsG0780040699.01.T01:intron 40.0%
TTCAACAGCACACAAAAGGA+TGG + Chr7:81336834-81336853 None:intergenic 40.0%
TTCAGTACCGCCATTTGAAA+TGG + Chr7:81333309-81333328 None:intergenic 40.0%
TTCATTCCCGCCATTTCAAA+TGG - Chr7:81333296-81333315 MsG0780040699.01.T01:intron 40.0%
TTCGAGACTCTAATGGTAGT+TGG + Chr7:81334252-81334271 None:intergenic 40.0%
TTCTGAACTAGATGCTATGG+AGG - Chr7:81337269-81337288 MsG0780040699.01.T01:intron 40.0%
TTTCAATAGGGGGTCAACTT+TGG - Chr7:81333476-81333495 MsG0780040699.01.T01:intron 40.0%
TTTGAAAAAAGATGGCTCGC+TGG + Chr7:81338799-81338818 None:intergenic 40.0%
! ACACACTCATCCACACTTTT+AGG + Chr7:81334687-81334706 None:intergenic 40.0%
! ATCTCTAAGGGCCAATTCTA+TGG - Chr7:81338089-81338108 MsG0780040699.01.T01:intron 40.0%
! ATCTGGAACATGCATGTCTA+AGG + Chr7:81333874-81333893 None:intergenic 40.0%
! ATGTGAGCAGCCTCTTTTAA+TGG + Chr7:81334397-81334416 None:intergenic 40.0%
! CACACTCATCCACACTTTTA+GGG + Chr7:81334686-81334705 None:intergenic 40.0%
! CCAAAGCTTGTTTATGCGTT+TGG + Chr7:81337163-81337182 None:intergenic 40.0%
! TAACTAGCCTAAATCAGGTG+CGG - Chr7:81334644-81334663 MsG0780040699.01.T01:intron 40.0%
! TCGTTCTGAACTAGATGCTA+TGG - Chr7:81337266-81337285 MsG0780040699.01.T01:intron 40.0%
! TGTGAGCAGCCTCTTTTAAT+GGG + Chr7:81334396-81334415 None:intergenic 40.0%
!! AATCACCTGGGATGGATTAT+TGG - Chr7:81334442-81334461 MsG0780040699.01.T01:intron 40.0%
!! ACATATATTGGCCTTAGGCT+AGG + Chr7:81339847-81339866 None:intergenic 40.0%
!! ATCACCTGGGATGGATTATT+GGG - Chr7:81334443-81334462 MsG0780040699.01.T01:intron 40.0%
!! ATGTTCAAGTTGTAGAGGGA+AGG - Chr7:81336558-81336577 MsG0780040699.01.T01:intron 40.0%
!! GACCCACTTTCAATTTTTGG+GGG + Chr7:81333443-81333462 None:intergenic 40.0%
!! GGATCATGTTCAAGTTGTAG+AGG - Chr7:81336553-81336572 MsG0780040699.01.T01:intron 40.0%
!! GGGCTGTTGATTTCTCTTAA+GGG - Chr7:81339771-81339790 MsG0780040699.01.T01:intron 40.0%
!! GTATTTTCAATCAGAGCACC+TGG + Chr7:81338548-81338567 None:intergenic 40.0%
!! TGGGCTGTTGATTTCTCTTA+AGG - Chr7:81339770-81339789 MsG0780040699.01.T01:intron 40.0%
!!! TGTCAGATTTTTTGTTGGCC+TGG - Chr7:81337092-81337111 MsG0780040699.01.T01:intron 40.0%
!!! TTTTAGAGGGGAAAGTGTCA+TGG + Chr7:81338058-81338077 None:intergenic 40.0%
AAACACTCGCGATCGAAATC+CGG - Chr7:81336278-81336297 MsG0780040699.01.T01:intron 45.0%
AACCTGTGACCGCGAAAAAA+TGG + Chr7:81336519-81336538 None:intergenic 45.0%
AAGTGTCTCTTGCTGACAAG+AGG + Chr7:81339682-81339701 None:intergenic 45.0%
AATACGGAGGACCAAGATAG+AGG - Chr7:81334059-81334078 MsG0780040699.01.T01:intron 45.0%
ACCCCACATTTCAGCAAGAA+GGG - Chr7:81334197-81334216 MsG0780040699.01.T01:intron 45.0%
AGCTTCTTCCTTTGACTCTC+AGG - Chr7:81337191-81337210 MsG0780040699.01.T01:intron 45.0%
AGGCTTGCCTATAGATGGAA+AGG + Chr7:81340088-81340107 None:intergenic 45.0%
AGGTTGAACCTGAGAGTCAA+AGG + Chr7:81337202-81337221 None:intergenic 45.0%
ATCACAATAGCGACATCAGG+AGG + Chr7:81337222-81337241 None:intergenic 45.0%
ATGAGGAAGAGAAGAGGAAG+AGG - Chr7:81332855-81332874 MsG0780040699.01.T01:intron 45.0%
ATGCCCTTCTTGCTGAAATG+TGG + Chr7:81334203-81334222 None:intergenic 45.0%
ATTCCCGCCATTTCAAATGG+CGG - Chr7:81333299-81333318 MsG0780040699.01.T01:intron 45.0%
CATTTCTATTCCTGGTCTCC+TGG - Chr7:81339632-81339651 MsG0780040699.01.T01:intron 45.0%
CCAACACCATGGTCAAATGA+TGG + Chr7:81338227-81338246 None:intergenic 45.0%
CCATCATTTGACCATGGTGT+TGG - Chr7:81338224-81338243 MsG0780040699.01.T01:intron 45.0%
CGGGAGGTCATAGTTTACAT+TGG - Chr7:81332928-81332947 MsG0780040699.01.T01:intron 45.0%
CTACTTTCATAGTCGCGTGT+TGG + Chr7:81334519-81334538 None:intergenic 45.0%
CTCATTCCCGCCATTTGAAA+CGG - Chr7:81333388-81333407 MsG0780040699.01.T01:intron 45.0%
GCTATTGTGATTCCCATGGA+TGG - Chr7:81337231-81337250 MsG0780040699.01.T01:intron 45.0%
GCTGATTATGCCTACACATG+TGG - Chr7:81335009-81335028 MsG0780040699.01.T01:intron 45.0%
GGAATCACAATAGCGACATC+AGG + Chr7:81337225-81337244 None:intergenic 45.0%
GGCTTGCCTATAGATGGAAA+GGG + Chr7:81340087-81340106 None:intergenic 45.0%
GTCGCTATAGCGTTATAACG+CGG + Chr7:81337020-81337039 None:intergenic 45.0%
TAAAAAAATCGCCGTTGCCG+GGG - Chr7:81335559-81335578 MsG0780040699.01.T01:intron 45.0%
TAACGCTATAGCGACAACAC+TGG - Chr7:81337025-81337044 MsG0780040699.01.T01:intron 45.0%
TACCCCACATTTCAGCAAGA+AGG - Chr7:81334196-81334215 MsG0780040699.01.T01:intron 45.0%
TAGATGTGAGCAGAAAGTCC+AGG - Chr7:81338527-81338546 MsG0780040699.01.T01:intron 45.0%
TCTGGTCAGAAACATGTGCA+AGG + Chr7:81339718-81339737 None:intergenic 45.0%
TGCCCTTCTTGCTGAAATGT+GGG + Chr7:81334202-81334221 None:intergenic 45.0%
TGTCGCTATTGTGATTCCCA+TGG - Chr7:81337227-81337246 MsG0780040699.01.T01:intron 45.0%
TGTGGAACAGGAAGAAGATG+AGG - Chr7:81332838-81332857 MsG0780040699.01.T01:intron 45.0%
TTGGAGAACAAGATGGGAGT+TGG + Chr7:81334546-81334565 None:intergenic 45.0%
TTTGGCTACTTCATGCGCTA+TGG + Chr7:81337145-81337164 None:intergenic 45.0%
! AACTAGCCTAAATCAGGTGC+GGG - Chr7:81334645-81334664 MsG0780040699.01.T01:intron 45.0%
! AAGGCATTACCCACATGTGT+AGG + Chr7:81335022-81335041 None:intergenic 45.0%
! AGCTTTTGCCTGTTTCATGC+TGG - Chr7:81339164-81339183 MsG0780040699.01.T01:intron 45.0%
! AGTACCGCCATTTGAAATGG+CGG + Chr7:81333306-81333325 None:intergenic 45.0%
! GCTTTTGCCTGTTTCATGCT+GGG - Chr7:81339165-81339184 MsG0780040699.01.T01:intron 45.0%
! GGATTGGTATATCAGCTCCA+TGG - Chr7:81337864-81337883 MsG0780040699.01.T01:intron 45.0%
! TAGTCGCGTGTTGGCATATT+TGG + Chr7:81334510-81334529 None:intergenic 45.0%
!! GAATTTGTTACGCTGTGCGA+TGG + Chr7:81336313-81336332 None:intergenic 45.0%
!! GTTGTTTGGGTTGTCTCTTC+TGG + Chr7:81339736-81339755 None:intergenic 45.0%
!! TCACCTGGGATGGATTATTG+GGG - Chr7:81334444-81334463 MsG0780040699.01.T01:intron 45.0%
!!! AGATTTTTTGTTGGCCTGGC+TGG - Chr7:81337096-81337115 MsG0780040699.01.T01:intron 45.0%
!!! ATGTTGCTTTTAAGCACGCG+TGG + Chr7:81334014-81334033 None:intergenic 45.0%
!!! TACCATTTTTTCGCGGTCAC+AGG - Chr7:81336514-81336533 MsG0780040699.01.T01:intron 45.0%
!! AAATTAAATGATAAATTTAA+AGG - Chr7:81338363-81338382 MsG0780040699.01.T01:intron 5.0%
AACACTCGCGATCGAAATCC+GGG - Chr7:81336279-81336298 MsG0780040699.01.T01:intron 50.0%
ACACCCCAATAATCCATCCC+AGG + Chr7:81334450-81334469 None:intergenic 50.0%
AGGGTTGCCAAGTGAGCTTA+TGG - Chr7:81334967-81334986 MsG0780040699.01.T01:intron 50.0%
ATAGCGTTATAACGCGGTGG+TGG + Chr7:81337014-81337033 None:intergenic 50.0%
ATGCAACCCGCACCTGATTT+AGG + Chr7:81334654-81334673 None:intergenic 50.0%
ATTGGCGTAAATGGTTGCCG+AGG - Chr7:81332946-81332965 MsG0780040699.01.T01:CDS 50.0%
CAACGAATGAACTGCGACGA+GGG + Chr7:81336244-81336263 None:intergenic 50.0%
CCTCCAGACATTGCTAAGCA+GGG - Chr7:81340105-81340124 MsG0780040699.01.T01:CDS 50.0%
CCTTCTCATCAACGCAACGA+CGG - Chr7:81336146-81336165 MsG0780040699.01.T01:intron 50.0%
CTCCAGACATTGCTAAGCAG+GGG - Chr7:81340106-81340125 MsG0780040699.01.T01:CDS 50.0%
CTTGGAAGATGGGGTATGGA+AGG - Chr7:81338936-81338955 MsG0780040699.01.T01:intron 50.0%
GCCCTTCTTGCTGAAATGTG+GGG + Chr7:81334201-81334220 None:intergenic 50.0%
GCTATAGCGTTATAACGCGG+TGG + Chr7:81337017-81337036 None:intergenic 50.0%
GGAATGAGCCGTCTTTCTGA+CGG + Chr7:81333376-81333395 None:intergenic 50.0%
GGATTTAACGACACTGACGC+TGG + Chr7:81336713-81336732 None:intergenic 50.0%
GGCAGCTGAAGACTTTACAC+TGG + Chr7:81334365-81334384 None:intergenic 50.0%
TACCCCTGCTTAGCAATGTC+TGG + Chr7:81340111-81340130 None:intergenic 50.0%
TCCTGATGAGGATGTGGAAC+AGG - Chr7:81332826-81332845 MsG0780040699.01.T01:intron 50.0%
TCCTGGTCTCCTGGACAATA+TGG - Chr7:81339641-81339660 MsG0780040699.01.T01:intron 50.0%
TCCTGTTCCACATCCTCATC+AGG + Chr7:81332830-81332849 None:intergenic 50.0%
TCTGGAGGCTTGCCTATAGA+TGG + Chr7:81340093-81340112 None:intergenic 50.0%
TGCTCTTGGAAGATGGGGTA+TGG - Chr7:81338932-81338951 MsG0780040699.01.T01:intron 50.0%
TTTAACGACACTGACGCTGG+AGG + Chr7:81336710-81336729 None:intergenic 50.0%
! ATTCCCGCCATTTGAAACGG+CGG - Chr7:81333391-81333410 MsG0780040699.01.T01:intron 50.0%
! CGTGTTGGCATATTTGGACC+TGG + Chr7:81334504-81334523 None:intergenic 50.0%
! GTACCGCCATTTGAAATGGC+GGG + Chr7:81333305-81333324 None:intergenic 50.0%
!! AGAGTAGGTTGGCCTTGCAA+AGG + Chr7:81338502-81338521 None:intergenic 50.0%
!!! ATGGTGCTTTTTCCAGCACC+AGG + Chr7:81337126-81337145 None:intergenic 50.0%
ACATGCCAGAAGAGGAGGTG+AGG - Chr7:81337783-81337802 MsG0780040699.01.T01:intron 55.0%
AGACAGGTAAGCAGTCGCGT+GGG + Chr7:81337899-81337918 None:intergenic 55.0%
AGGTACCTCACCTCCTCTTC+TGG + Chr7:81337791-81337810 None:intergenic 55.0%
AGTCCCGCCGTTTCAAATGG+CGG + Chr7:81333398-81333417 None:intergenic 55.0%
CAAAACCTGCAGCGACGTGA+CGG - Chr7:81333350-81333369 MsG0780040699.01.T01:intron 55.0%
CCACTGGATCTCCAACACCA+TGG + Chr7:81338238-81338257 None:intergenic 55.0%
CCCTGCTTAGCAATGTCTGG+AGG + Chr7:81340108-81340127 None:intergenic 55.0%
CGCGTGGGATTGAATGTCCA+TGG + Chr7:81337884-81337903 None:intergenic 55.0%
CTTCTGGCATGTGCTTCCTC+AGG + Chr7:81337775-81337794 None:intergenic 55.0%
GAAGCACATGCCAGAAGAGG+AGG - Chr7:81337778-81337797 MsG0780040699.01.T01:intron 55.0%
GCAACGAATGAACTGCGACG+AGG + Chr7:81336245-81336264 None:intergenic 55.0%
GCCATATTGTCCAGGAGACC+AGG + Chr7:81339645-81339664 None:intergenic 55.0%
GCCTCCAGACATTGCTAAGC+AGG - Chr7:81340104-81340123 MsG0780040699.01.T01:CDS 55.0%
TAAGTATCCCGCCTGTCACG+CGG + Chr7:81335601-81335620 None:intergenic 55.0%
TGGAGTCCCGCCGTTTCAAA+TGG + Chr7:81333401-81333420 None:intergenic 55.0%
TGTGCGATGGAGAGTGAACC+CGG + Chr7:81336300-81336319 None:intergenic 55.0%
! CCATGGTGTTGGAGATCCAG+TGG - Chr7:81338235-81338254 MsG0780040699.01.T01:intron 55.0%
! CCGTCGTTGCGTTGATGAGA+AGG + Chr7:81336149-81336168 None:intergenic 55.0%
! GAGGAAGCACATGCCAGAAG+AGG - Chr7:81337775-81337794 MsG0780040699.01.T01:intron 55.0%
! TTCCCGCCATTTGAAACGGC+GGG - Chr7:81333392-81333411 MsG0780040699.01.T01:intron 55.0%
!!! GTGCTTTTTCCAGCACCAGG+TGG + Chr7:81337123-81337142 None:intergenic 55.0%
AAGTATCCCGCCTGTCACGC+GGG + Chr7:81335600-81335619 None:intergenic 60.0%
CGTGACGGCCGTCAGAAAGA+CGG - Chr7:81333365-81333384 MsG0780040699.01.T01:intron 60.0%
GAGACAGGTAAGCAGTCGCG+TGG + Chr7:81337900-81337919 None:intergenic 60.0%
GTCCCGCCGTTTCAAATGGC+GGG + Chr7:81333397-81333416 None:intergenic 60.0%
CAGCACCAGGTGGACCAGCC+AGG + Chr7:81337113-81337132 None:intergenic 70.0%
CCGGGTTCGATCCCCGGCAA+CGG + Chr7:81335573-81335592 None:intergenic 70.0%
CCGTTGCCGGGGATCGAACC+CGG - Chr7:81335570-81335589 MsG0780040699.01.T01:intron 70.0%
CGTTGCCGGGGATCGAACCC+GGG - Chr7:81335571-81335590 MsG0780040699.01.T01:intron 70.0%
GGTGACCCGGGTTCGATCCC+CGG + Chr7:81335579-81335598 None:intergenic 70.0%
! CTGGCTGGTCCACCTGGTGC+TGG - Chr7:81337111-81337130 MsG0780040699.01.T01:intron 70.0%
! GTTGGCCTGGCTGGTCCACC+TGG - Chr7:81337105-81337124 MsG0780040699.01.T01:intron 70.0%
ACCCGGGTCACCCGCGTGAC+AGG - Chr7:81335587-81335606 MsG0780040699.01.T01:intron 75.0%
CGCCTGTCACGCGGGTGACC+CGG + Chr7:81335592-81335611 None:intergenic 75.0%
CGGGTCACCCGCGTGACAGG+CGG - Chr7:81335590-81335609 MsG0780040699.01.T01:intron 75.0%
GACGGCCGTCACGTCGCTGC+AGG + Chr7:81333358-81333377 None:intergenic 75.0%
GCCTGTCACGCGGGTGACCC+GGG + Chr7:81335591-81335610 None:intergenic 75.0%
GGGTCACCCGCGTGACAGGC+GGG - Chr7:81335591-81335610 MsG0780040699.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 81332800 81340131 81332800 ID=MsG0780040699.01;Name=MsG0780040699.01
Chr7 mRNA 81332800 81340131 81332800 ID=MsG0780040699.01.T01;Parent=MsG0780040699.01;Name=MsG0780040699.01.T01;_AED=0.57;_eAED=0.57;_QI=0|0.71|0.62|0.87|0.71|0.75|8|0|219
Chr7 exon 81340034 81340131 81340034 ID=MsG0780040699.01.T01:exon:38101;Parent=MsG0780040699.01.T01
Chr7 exon 81336190 81336267 81336190 ID=MsG0780040699.01.T01:exon:38100;Parent=MsG0780040699.01.T01
Chr7 exon 81335641 81335833 81335641 ID=MsG0780040699.01.T01:exon:38099;Parent=MsG0780040699.01.T01
Chr7 exon 81335127 81335162 81335127 ID=MsG0780040699.01.T01:exon:38098;Parent=MsG0780040699.01.T01
Chr7 exon 81334649 81334722 81334649 ID=MsG0780040699.01.T01:exon:38097;Parent=MsG0780040699.01.T01
Chr7 exon 81333945 81334031 81333945 ID=MsG0780040699.01.T01:exon:38096;Parent=MsG0780040699.01.T01
Chr7 exon 81332938 81332999 81332938 ID=MsG0780040699.01.T01:exon:38095;Parent=MsG0780040699.01.T01
Chr7 exon 81332800 81332831 81332800 ID=MsG0780040699.01.T01:exon:38094;Parent=MsG0780040699.01.T01
Chr7 CDS 81340034 81340131 81340034 ID=MsG0780040699.01.T01:cds;Parent=MsG0780040699.01.T01
Chr7 CDS 81336190 81336267 81336190 ID=MsG0780040699.01.T01:cds;Parent=MsG0780040699.01.T01
Chr7 CDS 81335641 81335833 81335641 ID=MsG0780040699.01.T01:cds;Parent=MsG0780040699.01.T01
Chr7 CDS 81335127 81335162 81335127 ID=MsG0780040699.01.T01:cds;Parent=MsG0780040699.01.T01
Chr7 CDS 81334649 81334722 81334649 ID=MsG0780040699.01.T01:cds;Parent=MsG0780040699.01.T01
Chr7 CDS 81333945 81334031 81333945 ID=MsG0780040699.01.T01:cds;Parent=MsG0780040699.01.T01
Chr7 CDS 81332938 81332999 81332938 ID=MsG0780040699.01.T01:cds;Parent=MsG0780040699.01.T01
Chr7 CDS 81332800 81332831 81332800 ID=MsG0780040699.01.T01:cds;Parent=MsG0780040699.01.T01
Gene Sequence

>MsG0780040699.01.T01

ATGGAAACTAATGATGATGCTGAAATTCCTGATGAGGATGTGGAACAGGAAGAAGATGAGGAAGAGAAGAGGAAGAGGAAGAGCAAAATCAACGACCCTGGTGTTGATGAGATATATGATACATTGGTTAGACGAATTCTGCCTCCAGCGTCAGTGTCGTTAAATCCTAATTATAAATTTTTTGTTGGCCTGGCTGGTCCACCTGGTGCTGGAAAAAGCACCATAGCGCATGAAGTAGCCAAACGCATAAACAAGCTTTGGCCAGAGAAAGCTTCTTCCTTTGACTCTCAGGTTCAACCTCCTGATGTCGCTATTGTGATTCCCATGGATGGTTTTCATCTTTATCGTTCTGAACTAGATGCTATGGAGAATCCTGAGGAAGCACATGCCAGAAGAGGAGGTGAGGGATCAGTTTATGCACCATCATTTGACCATGGTGTTGGAGATCCAGTGGAAGATGATATCTTTGTGAACCTTCAGCACAAAATCATTATTGTAGAAGGCAACTATTTGCTCTTGGAAGATGGGGTATGGAAGGAGATTTCATCTTTGTTTGATGAGAAATGGTTTATTGATATTGATATCGATAAAGCAATGCAGCGAGTTTTGAAGAGACATATTTCTACTGGCAAGCCTCCAGACATTGCTAAGCAGGGGTAA
Protein sequence

>MsG0780040699.01.T01

METNDDAEIPDEDVEQEEDEEEKRKRKSKINDPGVDEIYDTLVRRILPPASVSLNPNYKFFVGLAGPPGAGKSTIAHEVAKRINKLWPEKASSFDSQVQPPDVAIVIPMDGFHLYRSELDAMENPEEAHARRGGEGSVYAPSFDHGVGDPVEDDIFVNLQHKIIIVEGNYLLLEDGVWKEISSLFDEKWFIDIDIDKAMQRVLKRHISTGKPPDIAKQG*