Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041083.01.T01 | XP_039684219.1 | 95.417 | 480 | 14 | 3 | 23 | 499 | 1 | 475 | 0 | 954 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041083.01.T01 | Q9LZS0 | 45.39 | 423 | 166 | 12 | 23 | 409 | 1 | 394 | 1.07E-93 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041083.01.T01 | A0A396H5V1 | 95.417 | 480 | 14 | 3 | 23 | 499 | 1 | 475 | 0.0 | 954 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001892.01 | MsG0780041083.01 | 0.831857 | 1.316039e-55 | 1.446180e-52 |
| MsG0180003403.01 | MsG0780041083.01 | 0.821468 | 3.972674e-53 | 3.234639e-50 |
| MsG0180003951.01 | MsG0780041083.01 | 0.822793 | 1.958260e-53 | 1.655721e-50 |
| MsG0180004249.01 | MsG0780041083.01 | 0.800546 | 1.369777e-48 | 6.395517e-46 |
| MsG0180005575.01 | MsG0780041083.01 | 0.802498 | 5.453047e-49 | 2.675179e-46 |
| MsG0780041083.01 | MsG0780041448.01 | 0.838544 | 2.699670e-57 | 3.627654e-54 |
| MsG0780041083.01 | MsG0880041861.01 | 0.804244 | 2.370911e-49 | 1.216300e-46 |
| MsG0780041083.01 | MsG0880041863.01 | 0.803249 | 3.814316e-49 | 1.907489e-46 |
| MsG0780041083.01 | MsG0880043937.01 | 0.809584 | 1.760355e-50 | 1.037641e-47 |
| MsG0780041083.01 | MsG0880045607.01 | 0.801209 | 1.002807e-48 | 4.761547e-46 |
| MsG0280011319.01 | MsG0780041083.01 | 0.808459 | 3.065064e-50 | 1.753567e-47 |
| MsG0380011496.01 | MsG0780041083.01 | 0.821443 | 4.027743e-53 | 3.277202e-50 |
| MsG0380011501.01 | MsG0780041083.01 | 0.827248 | 1.737038e-54 | 1.667793e-51 |
| MsG0380013475.01 | MsG0780041083.01 | 0.805430 | 1.340015e-49 | 7.087946e-47 |
| MsG0680031621.01 | MsG0780041083.01 | 0.805788 | 1.127441e-49 | 6.018726e-47 |
| MsG0480020780.01 | MsG0780041083.01 | 0.813182 | 2.912927e-51 | 1.888948e-48 |
| MsG0480021056.01 | MsG0780041083.01 | 0.801983 | 6.958961e-49 | 3.369455e-46 |
| MsG0480023172.01 | MsG0780041083.01 | 0.803474 | 3.427315e-49 | 1.723869e-46 |
| MsG0580025357.01 | MsG0780041083.01 | -0.805175 | 1.515471e-49 | 7.963755e-47 |
| MsG0580025407.01 | MsG0780041083.01 | -0.809661 | 1.694199e-50 | 1.000692e-47 |
| MsG0380015332.01 | MsG0780041083.01 | 0.810921 | 9.061063e-51 | 5.533213e-48 |
| MsG0380015786.01 | MsG0780041083.01 | 0.815593 | 8.537497e-52 | 5.911454e-49 |
| MsG0380016247.01 | MsG0780041083.01 | 0.804909 | 1.722512e-49 | 8.990866e-47 |
| MsG0580027320.01 | MsG0780041083.01 | 0.824387 | 8.296312e-54 | 7.337505e-51 |
| MsG0580027798.01 | MsG0780041083.01 | 0.801604 | 8.327268e-49 | 3.993224e-46 |
| MsG0580027925.01 | MsG0780041083.01 | 0.847601 | 1.043342e-59 | 1.864142e-56 |
| MsG0580028436.01 | MsG0780041083.01 | 0.806159 | 9.418959e-50 | 5.076237e-47 |
| MsG0680030447.01 | MsG0780041083.01 | 0.816007 | 6.902565e-52 | 4.833827e-49 |
| MsG0280007506.01 | MsG0780041083.01 | 0.838398 | 2.945287e-57 | 3.939990e-54 |
| MsG0280007955.01 | MsG0780041083.01 | 0.832296 | 1.025182e-55 | 1.140896e-52 |
| MsG0280008378.01 | MsG0780041083.01 | 0.800149 | 1.650116e-48 | 7.627170e-46 |
| MsG0680035806.01 | MsG0780041083.01 | 0.801996 | 6.917852e-49 | 3.350693e-46 |
| MsG0780036147.01 | MsG0780041083.01 | 0.807355 | 5.264471e-50 | 2.925867e-47 |
| MsG0780036593.01 | MsG0780041083.01 | 0.800371 | 1.487213e-48 | 6.913304e-46 |
| MsG0780036815.01 | MsG0780041083.01 | 0.800251 | 1.573441e-48 | 7.291598e-46 |
| MsG0780037054.01 | MsG0780041083.01 | 0.805442 | 1.332421e-49 | 7.049913e-47 |
| MsG0780038424.01 | MsG0780041083.01 | 0.800434 | 1.443752e-48 | 6.721988e-46 |
| MsG0780039170.01 | MsG0780041083.01 | 0.806878 | 6.642902e-50 | 3.646522e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041083.01.T01 | MTR_1g060990 | 52.290 | 524 | 146 | 17 | 39 | 498 | 27 | 510 | 3.76e-153 | 446 |
| MsG0780041083.01.T01 | MTR_1g492790 | 38.391 | 435 | 208 | 16 | 39 | 435 | 10 | 422 | 2.68e-79 | 256 |
| MsG0780041083.01.T01 | MTR_1g098900 | 37.209 | 301 | 134 | 4 | 141 | 387 | 57 | 356 | 1.26e-48 | 177 |
| MsG0780041083.01.T01 | MTR_1g098900 | 43.000 | 100 | 54 | 3 | 132 | 230 | 446 | 543 | 7.40e-18 | 87.0 |
| MsG0780041083.01.T01 | MTR_1g098870 | 35.556 | 270 | 143 | 4 | 141 | 389 | 55 | 314 | 6.02e-39 | 149 |
| MsG0780041083.01.T01 | MTR_1g098870 | 41.732 | 127 | 62 | 4 | 130 | 255 | 361 | 476 | 4.44e-20 | 94.0 |
| MsG0780041083.01.T01 | MTR_6g035370 | 64.423 | 104 | 31 | 3 | 134 | 235 | 46 | 145 | 2.97e-34 | 137 |
| MsG0780041083.01.T01 | MTR_6g035370 | 44.330 | 97 | 52 | 2 | 137 | 232 | 460 | 555 | 5.27e-19 | 90.9 |
| MsG0780041083.01.T01 | MTR_1g081180 | 26.648 | 349 | 199 | 12 | 48 | 388 | 29 | 328 | 8.59e-16 | 80.5 |
| MsG0780041083.01.T01 | MTR_1g081180 | 37.634 | 93 | 54 | 3 | 141 | 230 | 418 | 509 | 2.52e-11 | 66.2 |
| MsG0780041083.01.T01 | MTR_7g114860 | 33.588 | 131 | 65 | 4 | 110 | 230 | 361 | 479 | 3.59e-14 | 75.1 |
| MsG0780041083.01.T01 | MTR_2g026725 | 33.884 | 121 | 76 | 3 | 111 | 228 | 230 | 349 | 6.92e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041083.01.T01 | AT5G03680 | 45.390 | 423 | 166 | 12 | 23 | 409 | 1 | 394 | 1.09e-94 | 299 |
| MsG0780041083.01.T01 | AT3G10000 | 39.872 | 469 | 223 | 11 | 69 | 499 | 34 | 481 | 8.10e-92 | 288 |
| MsG0780041083.01.T01 | AT3G10000 | 38.166 | 469 | 221 | 12 | 69 | 499 | 34 | 471 | 4.91e-82 | 263 |
| MsG0780041083.01.T01 | AT1G76890 | 34.727 | 311 | 141 | 7 | 134 | 388 | 34 | 338 | 3.68e-41 | 155 |
| MsG0780041083.01.T01 | AT1G76890 | 39.437 | 142 | 73 | 3 | 134 | 274 | 390 | 519 | 2.97e-20 | 94.4 |
| MsG0780041083.01.T01 | AT1G76880 | 55.856 | 111 | 43 | 2 | 121 | 231 | 46 | 150 | 1.22e-30 | 125 |
| MsG0780041083.01.T01 | AT1G76880 | 43.000 | 100 | 55 | 2 | 134 | 232 | 401 | 499 | 1.78e-17 | 85.9 |
| MsG0780041083.01.T01 | AT1G33240 | 60.606 | 99 | 35 | 2 | 141 | 239 | 62 | 156 | 4.55e-30 | 124 |
| MsG0780041083.01.T01 | AT1G33240 | 43.820 | 89 | 48 | 2 | 141 | 228 | 435 | 522 | 2.49e-16 | 82.4 |
| MsG0780041083.01.T01 | AT1G33240 | 60.606 | 99 | 35 | 2 | 141 | 239 | 62 | 156 | 5.93e-30 | 124 |
| MsG0780041083.01.T01 | AT1G33240 | 43.820 | 89 | 48 | 2 | 141 | 228 | 435 | 522 | 2.36e-16 | 82.4 |
| MsG0780041083.01.T01 | AT1G33240 | 43.820 | 89 | 48 | 2 | 141 | 228 | 396 | 483 | 2.42e-16 | 82.4 |
| MsG0780041083.01.T01 | AT1G33240 | 64.407 | 59 | 18 | 1 | 181 | 239 | 62 | 117 | 2.84e-15 | 79.0 |
| MsG0780041083.01.T01 | AT5G28300 | 38.614 | 101 | 50 | 4 | 141 | 230 | 459 | 558 | 1.69e-12 | 70.1 |
| MsG0780041083.01.T01 | AT5G47660 | 41.758 | 91 | 45 | 4 | 141 | 228 | 303 | 388 | 1.40e-11 | 66.6 |
Find 107 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGATATTATTACTTATT+AGG | 0.192936 | 7:-86262645 | MsG0780041083.01.T01:three_prime_UTR |
| AGCTAGGGATGCTGCTTTAA+TGG | 0.226192 | 7:-86263130 | MsG0780041083.01.T01:CDS |
| ATTATTGCTTTCTCCATATA+AGG | 0.243458 | 7:+86263575 | None:intergenic |
| CGTCAACTTGAAGCCTTATA+TGG | 0.244935 | 7:-86263588 | MsG0780041083.01.T01:CDS |
| AAATTTCAACTCACTGGTTT+TGG | 0.258916 | 7:+86262764 | None:intergenic |
| TATTACTTATTAGGTAATTA+AGG | 0.265081 | 7:-86262636 | MsG0780041083.01.T01:three_prime_UTR |
| TACTATCATAGTGTTGATTA+TGG | 0.322614 | 7:+86264870 | None:intergenic |
| TGATTCACAGCTGAAGAAAT+TGG | 0.325251 | 7:-86263307 | MsG0780041083.01.T01:CDS |
| CTCTTTGGGATCAACTTTCT+AGG | 0.339621 | 7:-86264445 | MsG0780041083.01.T01:intron |
| GCTTCAACTCCTTCATTTAG+TGG | 0.343719 | 7:-86264605 | MsG0780041083.01.T01:CDS |
| TTCAAAGAAGCTACTCAAAA+AGG | 0.354316 | 7:-86264470 | MsG0780041083.01.T01:CDS |
| GGAGTAGTGGAAGAAGCTTC+TGG | 0.362256 | 7:-86263353 | MsG0780041083.01.T01:CDS |
| TTGATCATTAACATCACAAT+AGG | 0.364480 | 7:+86262930 | None:intergenic |
| AAATTGTTGGTAGTTGATCT+TGG | 0.391857 | 7:+86264809 | None:intergenic |
| ATTCAATTATCTCATGGAAA+TGG | 0.397721 | 7:-86264897 | MsG0780041083.01.T01:CDS |
| CACAAAGACATTGGAACAAA+AGG | 0.401812 | 7:-86263253 | MsG0780041083.01.T01:CDS |
| GTGTTGTTGATGTGGGTTGC+CGG | 0.402706 | 7:+86264763 | None:intergenic |
| TGTTGATGTGGGTTGCCGGC+GGG | 0.415527 | 7:+86264767 | None:intergenic |
| GAAACAAGAGAAAGAAAGGT+TGG | 0.430312 | 7:-86263196 | MsG0780041083.01.T01:CDS |
| CCCTCAGTACTCATCAAGAA+TGG | 0.434497 | 7:+86262832 | None:intergenic |
| GTTGTGAAATTTCAACTCAC+TGG | 0.445766 | 7:+86262758 | None:intergenic |
| TGTGGGAGTGAAGATGAAGA+AGG | 0.446001 | 7:+86263552 | None:intergenic |
| GGAGGAAACAAGAGAAAGAA+AGG | 0.446373 | 7:-86263200 | MsG0780041083.01.T01:CDS |
| GCTGAAACTACTGGTTTCAT+TGG | 0.454310 | 7:-86264572 | MsG0780041083.01.T01:CDS |
| TTTGGGCTAAAGAAAGAGCT+TGG | 0.456386 | 7:-86263158 | MsG0780041083.01.T01:CDS |
| ATACTATTGAAAGTTGAGAT+AGG | 0.456436 | 7:+86264923 | None:intergenic |
| ATGGGGACCATTACCCTTGT+TGG | 0.461250 | 7:-86265124 | MsG0780041083.01.T01:five_prime_UTR |
| ATTGGTGTTGATGCTTCAAC+TGG | 0.466336 | 7:-86264554 | MsG0780041083.01.T01:CDS |
| AAACATTTCCTGATTGTTGT+TGG | 0.473343 | 7:+86263515 | None:intergenic |
| GGAGAAGCAAGAAGAATGGT+TGG | 0.477059 | 7:-86263283 | MsG0780041083.01.T01:CDS |
| AAAGAGCTTGGATTGAAGCT+AGG | 0.477669 | 7:-86263146 | MsG0780041083.01.T01:CDS |
| TATCACAGTGTTTGTTAATG+TGG | 0.481655 | 7:+86263487 | None:intergenic |
| GGAAAAGCAGGAAGACAAGA+TGG | 0.483853 | 7:-86263630 | MsG0780041083.01.T01:CDS |
| GTGGGAGAATTACAACTTGA+AGG | 0.483975 | 7:-86262800 | MsG0780041083.01.T01:CDS |
| ATTAAGACCAACAAGGGTAA+TGG | 0.488890 | 7:+86265117 | None:intergenic |
| AAGACCAAGGAAGGAAAAGC+AGG | 0.489921 | 7:-86263642 | MsG0780041083.01.T01:CDS |
| ATTGCATATATTATAAGATA+AGG | 0.492375 | 7:+86264966 | None:intergenic |
| TGAGTAGCTTCTTTGAATTG+AGG | 0.494836 | 7:+86264476 | None:intergenic |
| ATCTCATAGTGTTGTTGATG+TGG | 0.498646 | 7:+86264755 | None:intergenic |
| TATAATGTTAACAATGGAGA+TGG | 0.503073 | 7:-86262961 | MsG0780041083.01.T01:CDS |
| AATGATCAAAGGGAAGAACT+TGG | 0.504968 | 7:-86262916 | MsG0780041083.01.T01:CDS |
| ACTCAATCTTCTTCTCATGA+TGG | 0.508615 | 7:-86263063 | MsG0780041083.01.T01:CDS |
| CACTATGAGATGATGATGTT+TGG | 0.510125 | 7:-86264743 | MsG0780041083.01.T01:CDS |
| TATCATATTCAATTATCTCA+TGG | 0.512431 | 7:-86264903 | MsG0780041083.01.T01:CDS |
| CCTCAGTACTCATCAAGAAT+GGG | 0.515932 | 7:+86262833 | None:intergenic |
| TTGTGATGTTAATGATCAAA+GGG | 0.516121 | 7:-86262926 | MsG0780041083.01.T01:CDS |
| TGGAAATAATAAGAAGAGAA+AGG | 0.518093 | 7:-86263043 | MsG0780041083.01.T01:CDS |
| ATCACAGTGTTTGTTAATGT+GGG | 0.521709 | 7:+86263488 | None:intergenic |
| TATATTATAAGATAAGGAAA+AGG | 0.521721 | 7:+86264972 | None:intergenic |
| TGTTTATATAATGTTAACAA+TGG | 0.527902 | 7:-86262967 | MsG0780041083.01.T01:CDS |
| TTGATGCTTCAACTGGAAGA+TGG | 0.530593 | 7:-86264547 | MsG0780041083.01.T01:CDS |
| CCATTCTTGATGAGTACTGA+GGG | 0.532198 | 7:-86262832 | MsG0780041083.01.T01:CDS |
| GGGTGTTAAGAGAAGAAGAG+TGG | 0.532295 | 7:-86263221 | MsG0780041083.01.T01:CDS |
| AAGAGCTTGGATTGAAGCTA+GGG | 0.532871 | 7:-86263145 | MsG0780041083.01.T01:CDS |
| CAATTGTACACACACAGACA+TGG | 0.535577 | 7:-86265143 | None:intergenic |
| TACTGAGGGAGGAAATATGT+GGG | 0.537099 | 7:-86262818 | MsG0780041083.01.T01:CDS |
| AACTTAGAAGCTGAAACTAC+TGG | 0.538788 | 7:-86264581 | MsG0780041083.01.T01:CDS |
| GTTGATGTGGGTTGCCGGCG+GGG | 0.539548 | 7:+86264768 | None:intergenic |
| ATTGTGATGTTAATGATCAA+AGG | 0.541913 | 7:-86262927 | MsG0780041083.01.T01:CDS |
| TCTAAGTTACCACTAAATGA+AGG | 0.544833 | 7:+86264596 | None:intergenic |
| AAGAGCTAACTGAAGAAATG+AGG | 0.545636 | 7:-86262687 | MsG0780041083.01.T01:three_prime_UTR |
| GCACTAGTGGTAGTGTTGGT+AGG | 0.547488 | 7:+86264626 | None:intergenic |
| TGGTGGAGAAGCAAGAAGAA+TGG | 0.548730 | 7:-86263287 | MsG0780041083.01.T01:CDS |
| TCTCATAGTGTTGTTGATGT+GGG | 0.555577 | 7:+86264756 | None:intergenic |
| CTCCGCCGTAGGGAAATTGT+TGG | 0.561007 | 7:+86264796 | None:intergenic |
| GTTAACAATGGAGATGGAGC+TGG | 0.562473 | 7:-86262955 | MsG0780041083.01.T01:CDS |
| TTGTTGATGTGGGTTGCCGG+CGG | 0.563154 | 7:+86264766 | None:intergenic |
| AGTGTAAGAGTCTCTTGTCT+AGG | 0.565795 | 7:+86264524 | None:intergenic |
| ATGATAACAACAATGTTGAT+CGG | 0.565825 | 7:-86262993 | MsG0780041083.01.T01:CDS |
| TTCACAGCTGAAGAAATTGG+TGG | 0.567445 | 7:-86263304 | MsG0780041083.01.T01:CDS |
| GGGAGAGTACAAACAAATGA+TGG | 0.567681 | 7:-86262895 | MsG0780041083.01.T01:CDS |
| ACAGTAACAGCAGCAACAGC+AGG | 0.567957 | 7:+86264662 | None:intergenic |
| GAAAAGCAGGAAGACAAGAT+GGG | 0.570202 | 7:-86263629 | MsG0780041083.01.T01:CDS |
| AATTGTACACACACAGACAT+GGG | 0.578580 | 7:-86265142 | None:intergenic |
| GCGGGGAATAGCTCCGCCGT+AGG | 0.579850 | 7:+86264785 | None:intergenic |
| TGAAGCACTAGTGGTAGTGT+TGG | 0.582167 | 7:+86264622 | None:intergenic |
| CAAAGAGAATGAGTTCTCCA+TGG | 0.584262 | 7:-86263391 | MsG0780041083.01.T01:CDS |
| ATGATCAAAGGGAAGAACTT+GGG | 0.587215 | 7:-86262915 | MsG0780041083.01.T01:CDS |
| GGAGAAACTCACAAAGACAT+TGG | 0.587360 | 7:-86263262 | MsG0780041083.01.T01:CDS |
| CGGGGAATAGCTCCGCCGTA+GGG | 0.588808 | 7:+86264786 | None:intergenic |
| AACATGGCTATCAAAGGAGT+GGG | 0.590438 | 7:-86263710 | MsG0780041083.01.T01:CDS |
| AGTGGTAGTGTTGGTAGGAG+TGG | 0.591896 | 7:+86264631 | None:intergenic |
| CCCATTCTTGATGAGTACTG+AGG | 0.594659 | 7:-86262833 | MsG0780041083.01.T01:CDS |
| CTCAAATATTAAGACCAACA+AGG | 0.598102 | 7:+86265110 | None:intergenic |
| GTGAAGAACATGGCTATCAA+AGG | 0.598664 | 7:-86263716 | MsG0780041083.01.T01:CDS |
| AGGATAATGTGTGAAGAACA+TGG | 0.603245 | 7:-86263726 | MsG0780041083.01.T01:CDS |
| CGAATTCAGTGGAGTTTGTG+AGG | 0.604333 | 7:+86263457 | None:intergenic |
| GAACATGGCTATCAAAGGAG+TGG | 0.606340 | 7:-86263711 | MsG0780041083.01.T01:CDS |
| AGAGCTAACTGAAGAAATGA+GGG | 0.609109 | 7:-86262686 | MsG0780041083.01.T01:three_prime_UTR |
| AAGATGTTAAGCGGCAGAGT+CGG | 0.611463 | 7:+86265066 | None:intergenic |
| TGATGATCATAGTACTCATG+AGG | 0.611714 | 7:-86263418 | MsG0780041083.01.T01:CDS |
| TGAAGGAGTTGAAGCACTAG+TGG | 0.611717 | 7:+86264613 | None:intergenic |
| TCAAATATTAAGACCAACAA+GGG | 0.614018 | 7:+86265111 | None:intergenic |
| GATGATCATAGTACTCATGA+GGG | 0.620992 | 7:-86263417 | MsG0780041083.01.T01:CDS |
| TGAAGATTGAAGATGTTAAG+CGG | 0.622485 | 7:+86265057 | None:intergenic |
| CGATGATGTGTCGAATTCAG+TGG | 0.625749 | 7:+86263446 | None:intergenic |
| AACTACCAACAATTTCCCTA+CGG | 0.632466 | 7:-86264801 | MsG0780041083.01.T01:CDS |
| TGTTAAGAGAAGAAGAGTGG+AGG | 0.635425 | 7:-86263218 | MsG0780041083.01.T01:CDS |
| TAGTGGAAGAAGCTTCTGGA+AGG | 0.636390 | 7:-86263349 | MsG0780041083.01.T01:CDS |
| CTAGAAAGTTGATCCCAAAG+AGG | 0.637397 | 7:+86264446 | None:intergenic |
| ACGGCGGAGCTATTCCCCGC+CGG | 0.640713 | 7:-86264782 | MsG0780041083.01.T01:CDS |
| GTACTGAGGGAGGAAATATG+TGG | 0.650852 | 7:-86262819 | MsG0780041083.01.T01:CDS |
| TACCAACAATTTCCCTACGG+CGG | 0.660564 | 7:-86264798 | MsG0780041083.01.T01:CDS |
| TTCTTGATGAGTACTGAGGG+AGG | 0.678329 | 7:-86262829 | MsG0780041083.01.T01:CDS |
| ATTGTACACACACAGACATG+GGG | 0.690413 | 7:-86265141 | None:intergenic |
| ATGATCATAGTACTCATGAG+GGG | 0.712141 | 7:-86263416 | MsG0780041083.01.T01:CDS |
| ACAAAATCATGAAGACAACG+AGG | 0.773702 | 7:+86264698 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAGAGATAATAAAA+GGG | + | Chr7:86263628-86263647 | None:intergenic | 10.0% |
| !! | TTAAATAAAGAGATAATAAA+AGG | + | Chr7:86263629-86263648 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTCTTCTA+AGG | - | Chr7:86265011-86265030 | MsG0780041083.01.T01:five_prime_UTR | 10.0% |
| !! | ATTGCATATATTATAAGATA+AGG | + | Chr7:86262781-86262800 | None:intergenic | 15.0% |
| !! | TATATTATAAGATAAGGAAA+AGG | + | Chr7:86262775-86262794 | None:intergenic | 15.0% |
| !! | TATTACTTATTAGGTAATTA+AGG | - | Chr7:86265108-86265127 | MsG0780041083.01.T01:five_prime_UTR | 15.0% |
| !! | TGATGATATTATTACTTATT+AGG | - | Chr7:86265099-86265118 | MsG0780041083.01.T01:five_prime_UTR | 15.0% |
| !! | TGTTTATATAATGTTAACAA+TGG | - | Chr7:86264777-86264796 | MsG0780041083.01.T01:CDS | 15.0% |
| !!! | ATCAATATTTTTATCAATCT+AGG | - | Chr7:86265137-86265156 | MsG0780041083.01.T01:five_prime_UTR | 15.0% |
| !! | AAAAACAACAAAAGCTTAAT+TGG | + | Chr7:86263961-86263980 | None:intergenic | 20.0% |
| !! | AAAACAACAAAAGCTTAATT+GGG | + | Chr7:86263960-86263979 | None:intergenic | 20.0% |
| !! | AAACATACCAAATAATTTGA+AGG | + | Chr7:86263359-86263378 | None:intergenic | 20.0% |
| !! | TATCATATTCAATTATCTCA+TGG | - | Chr7:86262841-86262860 | MsG0780041083.01.T01:CDS | 20.0% |
| !! | TTTGTAAGCAAATTTATTGA+GGG | - | Chr7:86263684-86263703 | MsG0780041083.01.T01:CDS | 20.0% |
| !!! | ATGTCATTTAAATTGTCAAT+AGG | + | Chr7:86263800-86263819 | None:intergenic | 20.0% |
| !!! | TTTAAAATACACTCAACTTT+CGG | - | Chr7:86263644-86263663 | MsG0780041083.01.T01:CDS | 20.0% |
| !!! | TTTTGTAAGCAAATTTATTG+AGG | - | Chr7:86263683-86263702 | MsG0780041083.01.T01:CDS | 20.0% |
| !!! | TTTTTGTGGAATTTTTGTTA+AGG | - | Chr7:86263470-86263489 | MsG0780041083.01.T01:CDS | 20.0% |
| ! | AAAAAAGGTAGTACTAATCT+TGG | + | Chr7:86263559-86263578 | None:intergenic | 25.0% |
| ! | AAACAACAAAAGCTTAATTG+GGG | + | Chr7:86263959-86263978 | None:intergenic | 25.0% |
| ! | AATTAATATTGAACCCTAGT+TGG | + | Chr7:86263933-86263952 | None:intergenic | 25.0% |
| ! | ACAAAAATTCCACAAAAAGT+AGG | + | Chr7:86263468-86263487 | None:intergenic | 25.0% |
| ! | ACAATTTCAAAAGGGAAAAA+AGG | + | Chr7:86263574-86263593 | None:intergenic | 25.0% |
| ! | ACCAAATAATTTGAAGGAAA+AGG | + | Chr7:86263353-86263372 | None:intergenic | 25.0% |
| ! | ATACTATTGAAAGTTGAGAT+AGG | + | Chr7:86262824-86262843 | None:intergenic | 25.0% |
| ! | ATGATAACAACAATGTTGAT+CGG | - | Chr7:86264751-86264770 | MsG0780041083.01.T01:CDS | 25.0% |
| ! | ATTATTGCTTTCTCCATATA+AGG | + | Chr7:86264172-86264191 | None:intergenic | 25.0% |
| ! | ATTCAATTATCTCATGGAAA+TGG | - | Chr7:86262847-86262866 | MsG0780041083.01.T01:CDS | 25.0% |
| ! | ATTGTGATGTTAATGATCAA+AGG | - | Chr7:86264817-86264836 | MsG0780041083.01.T01:CDS | 25.0% |
| ! | CAAAAATTCCACAAAAAGTA+GGG | + | Chr7:86263467-86263486 | None:intergenic | 25.0% |
| ! | TAATTATTTATGCTTGCACT+TGG | - | Chr7:86263426-86263445 | MsG0780041083.01.T01:CDS | 25.0% |
| ! | TATAATGTTAACAATGGAGA+TGG | - | Chr7:86264783-86264802 | MsG0780041083.01.T01:CDS | 25.0% |
| ! | TCAAATATTAAGACCAACAA+GGG | + | Chr7:86262636-86262655 | None:intergenic | 25.0% |
| ! | TGGAAATAATAAGAAGAGAA+AGG | - | Chr7:86264701-86264720 | MsG0780041083.01.T01:CDS | 25.0% |
| ! | TTGATCATTAACATCACAAT+AGG | + | Chr7:86264817-86264836 | None:intergenic | 25.0% |
| ! | TTGTAAGCAAATTTATTGAG+GGG | - | Chr7:86263685-86263704 | MsG0780041083.01.T01:CDS | 25.0% |
| ! | TTGTGATGTTAATGATCAAA+GGG | - | Chr7:86264818-86264837 | MsG0780041083.01.T01:CDS | 25.0% |
| ! | TTTGTGTTAACAAAAATGAG+TGG | - | Chr7:86263376-86263395 | MsG0780041083.01.T01:CDS | 25.0% |
| !! | TCCTTTTCCTTCAAATTATT+TGG | - | Chr7:86263349-86263368 | MsG0780041083.01.T01:CDS | 25.0% |
| !! | TTTTGTTAAGGTTCTTTTAC+TGG | - | Chr7:86263482-86263501 | MsG0780041083.01.T01:CDS | 25.0% |
| !!! | GGAAAAAGAGCATAAATTTT+GGG | - | Chr7:86264569-86264588 | MsG0780041083.01.T01:CDS | 25.0% |
| !!! | TACTATCATAGTGTTGATTA+TGG | + | Chr7:86262877-86262896 | None:intergenic | 25.0% |
| !!! | TGGAAAAAGAGCATAAATTT+TGG | - | Chr7:86264568-86264587 | MsG0780041083.01.T01:CDS | 25.0% |
| !!! | TGGTACAAAAATTGTTTTGT+GGG | + | Chr7:86264212-86264231 | None:intergenic | 25.0% |
| !!! | TTGGTACAAAAATTGTTTTG+TGG | + | Chr7:86264213-86264232 | None:intergenic | 25.0% |
| AAACATTTCCTGATTGTTGT+TGG | + | Chr7:86264232-86264251 | None:intergenic | 30.0% | |
| AACAACAAAAGCTTAATTGG+GGG | + | Chr7:86263958-86263977 | None:intergenic | 30.0% | |
| AATATTCATAGCTCCAACTA+GGG | - | Chr7:86263917-86263936 | MsG0780041083.01.T01:intron | 30.0% | |
| ACATATTACACGACAATACA+TGG | - | Chr7:86263828-86263847 | MsG0780041083.01.T01:intron | 30.0% | |
| ACTTTGCACTTAAAAGAAAG+AGG | + | Chr7:86263601-86263620 | None:intergenic | 30.0% | |
| CAAATACTACAAAAAGACCA+AGG | - | Chr7:86264089-86264108 | MsG0780041083.01.T01:intron | 30.0% | |
| CTAATTCTATCTGTCTAACA+TGG | - | Chr7:86263731-86263750 | MsG0780041083.01.T01:intron | 30.0% | |
| CTCAAATATTAAGACCAACA+AGG | + | Chr7:86262637-86262656 | None:intergenic | 30.0% | |
| CTTTGCACTTAAAAGAAAGA+GGG | + | Chr7:86263600-86263619 | None:intergenic | 30.0% | |
| GAAGCTTTGCAAAAATTAAC+AGG | - | Chr7:86264636-86264655 | MsG0780041083.01.T01:CDS | 30.0% | |
| TCTAAGTTACCACTAAATGA+AGG | + | Chr7:86263151-86263170 | None:intergenic | 30.0% | |
| TGAAGATTGAAGATGTTAAG+CGG | + | Chr7:86262690-86262709 | None:intergenic | 30.0% | |
| TGTAAGCAAATTTATTGAGG+GGG | - | Chr7:86263686-86263705 | MsG0780041083.01.T01:CDS | 30.0% | |
| TTCAAAGAAGCTACTCAAAA+AGG | - | Chr7:86263274-86263293 | MsG0780041083.01.T01:CDS | 30.0% | |
| ! | ATCACAGTGTTTGTTAATGT+GGG | + | Chr7:86264259-86264278 | None:intergenic | 30.0% |
| ! | CAATAGGAATGAGTTTTTGA+AGG | + | Chr7:86263784-86263803 | None:intergenic | 30.0% |
| ! | CATTGCTTGTATTGATGTTA+AGG | - | Chr7:86263998-86264017 | MsG0780041083.01.T01:intron | 30.0% |
| ! | TATCACAGTGTTTGTTAATG+TGG | + | Chr7:86264260-86264279 | None:intergenic | 30.0% |
| ! | TTTTTGTACCAACAACAATC+AGG | - | Chr7:86264221-86264240 | MsG0780041083.01.T01:intron | 30.0% |
| !! | AAATTGTTGGTAGTTGATCT+TGG | + | Chr7:86262938-86262957 | None:intergenic | 30.0% |
| !!! | AAATTTCAACTCACTGGTTT+TGG | + | Chr7:86264983-86265002 | None:intergenic | 30.0% |
| !!! | AATTTTGTCCCTACTTTTTG+TGG | - | Chr7:86263456-86263475 | MsG0780041083.01.T01:CDS | 30.0% |
| AACTACCAACAATTTCCCTA+CGG | - | Chr7:86262943-86262962 | MsG0780041083.01.T01:CDS | 35.0% | |
| AACTTAGAAGCTGAAACTAC+TGG | - | Chr7:86263163-86263182 | MsG0780041083.01.T01:CDS | 35.0% | |
| AAGAGAAAAAAGAGGAGTAG+TGG | - | Chr7:86264378-86264397 | MsG0780041083.01.T01:intron | 35.0% | |
| AAGAGCTAACTGAAGAAATG+AGG | - | Chr7:86265057-86265076 | MsG0780041083.01.T01:five_prime_UTR | 35.0% | |
| AATGATCAAAGGGAAGAACT+TGG | - | Chr7:86264828-86264847 | MsG0780041083.01.T01:CDS | 35.0% | |
| ACAAAATCATGAAGACAACG+AGG | + | Chr7:86263049-86263068 | None:intergenic | 35.0% | |
| ACTCAATCTTCTTCTCATGA+TGG | - | Chr7:86264681-86264700 | MsG0780041083.01.T01:CDS | 35.0% | |
| AGAGCTAACTGAAGAAATGA+GGG | - | Chr7:86265058-86265077 | MsG0780041083.01.T01:five_prime_UTR | 35.0% | |
| AGGATAATGTGTGAAGAACA+TGG | - | Chr7:86264018-86264037 | MsG0780041083.01.T01:intron | 35.0% | |
| ATGATCAAAGGGAAGAACTT+GGG | - | Chr7:86264829-86264848 | MsG0780041083.01.T01:CDS | 35.0% | |
| ATGATCATAGTACTCATGAG+GGG | - | Chr7:86264328-86264347 | MsG0780041083.01.T01:intron | 35.0% | |
| ATTAAGACCAACAAGGGTAA+TGG | + | Chr7:86262630-86262649 | None:intergenic | 35.0% | |
| CAATATTCATAGCTCCAACT+AGG | - | Chr7:86263916-86263935 | MsG0780041083.01.T01:intron | 35.0% | |
| CACAAAGACATTGGAACAAA+AGG | - | Chr7:86264491-86264510 | MsG0780041083.01.T01:CDS | 35.0% | |
| CCATGGATAAGAGAAAAAAG+AGG | - | Chr7:86264370-86264389 | MsG0780041083.01.T01:intron | 35.0% | |
| CTAGTTGGAGCTATGAATAT+TGG | + | Chr7:86263918-86263937 | None:intergenic | 35.0% | |
| GAAACAAGAGAAAGAAAGGT+TGG | - | Chr7:86264548-86264567 | MsG0780041083.01.T01:CDS | 35.0% | |
| GATGATCATAGTACTCATGA+GGG | - | Chr7:86264327-86264346 | MsG0780041083.01.T01:intron | 35.0% | |
| GGAACAAAAGGAAAAAGAGA+GGG | - | Chr7:86264503-86264522 | MsG0780041083.01.T01:CDS | 35.0% | |
| GTTGTGAAATTTCAACTCAC+TGG | + | Chr7:86264989-86265008 | None:intergenic | 35.0% | |
| TACTACAAAAAGACCAAGGA+AGG | - | Chr7:86264093-86264112 | MsG0780041083.01.T01:intron | 35.0% | |
| TACTCAAAAAGGTCCTCTTT+GGG | - | Chr7:86263285-86263304 | MsG0780041083.01.T01:CDS | 35.0% | |
| TGAGTAGCTTCTTTGAATTG+AGG | + | Chr7:86263271-86263290 | None:intergenic | 35.0% | |
| TGATGATCATAGTACTCATG+AGG | - | Chr7:86264326-86264345 | MsG0780041083.01.T01:intron | 35.0% | |
| TGATTCACAGCTGAAGAAAT+TGG | - | Chr7:86264437-86264456 | MsG0780041083.01.T01:intron | 35.0% | |
| TGGAACAAAAGGAAAAAGAG+AGG | - | Chr7:86264502-86264521 | MsG0780041083.01.T01:CDS | 35.0% | |
| ! | AAATTTATTGAGGGGGTACA+AGG | - | Chr7:86263693-86263712 | MsG0780041083.01.T01:CDS | 35.0% |
| ! | AATTTATTGAGGGGGTACAA+GGG | - | Chr7:86263694-86263713 | MsG0780041083.01.T01:CDS | 35.0% |
| ! | AGAGGGTACACAATTTCAAA+AGG | + | Chr7:86263583-86263602 | None:intergenic | 35.0% |
| ! | ATCTCATAGTGTTGTTGATG+TGG | + | Chr7:86262992-86263011 | None:intergenic | 35.0% |
| ! | CACTATGAGATGATGATGTT+TGG | - | Chr7:86263001-86263020 | MsG0780041083.01.T01:CDS | 35.0% |
| ! | GAGGGTACACAATTTCAAAA+GGG | + | Chr7:86263582-86263601 | None:intergenic | 35.0% |
| ! | TCTCATAGTGTTGTTGATGT+GGG | + | Chr7:86262991-86263010 | None:intergenic | 35.0% |
| !!! | CCTCTTTTTTCTCTTATCCA+TGG | + | Chr7:86264373-86264392 | None:intergenic | 35.0% |
| AAAGAGCTTGGATTGAAGCT+AGG | - | Chr7:86264598-86264617 | MsG0780041083.01.T01:CDS | 40.0% | |
| AAAGGAGTGGGAAAAAATGC+AGG | - | Chr7:86264046-86264065 | MsG0780041083.01.T01:intron | 40.0% | |
| AACATGGCTATCAAAGGAGT+GGG | - | Chr7:86264034-86264053 | MsG0780041083.01.T01:intron | 40.0% | |
| AAGAGCTTGGATTGAAGCTA+GGG | - | Chr7:86264599-86264618 | MsG0780041083.01.T01:CDS | 40.0% | |
| AAGGAGTGGGAAAAAATGCA+GGG | - | Chr7:86264047-86264066 | MsG0780041083.01.T01:intron | 40.0% | |
| AGGAAGAGTCTGTGATTGAT+TGG | + | Chr7:86263764-86263783 | None:intergenic | 40.0% | |
| AGTGTAAGAGTCTCTTGTCT+AGG | + | Chr7:86263223-86263242 | None:intergenic | 40.0% | |
| CAAAGAGAATGAGTTCTCCA+TGG | - | Chr7:86264353-86264372 | MsG0780041083.01.T01:intron | 40.0% | |
| CCTCAGTACTCATCAAGAAT+GGG | + | Chr7:86264914-86264933 | None:intergenic | 40.0% | |
| CTACTCAAAAAGGTCCTCTT+TGG | - | Chr7:86263284-86263303 | MsG0780041083.01.T01:CDS | 40.0% | |
| GAAAAGCAGGAAGACAAGAT+GGG | - | Chr7:86264115-86264134 | MsG0780041083.01.T01:intron | 40.0% | |
| GCTTCAACTCCTTCATTTAG+TGG | - | Chr7:86263139-86263158 | MsG0780041083.01.T01:CDS | 40.0% | |
| GGAGAAACTCACAAAGACAT+TGG | - | Chr7:86264482-86264501 | MsG0780041083.01.T01:CDS | 40.0% | |
| GGAGGAAACAAGAGAAAGAA+AGG | - | Chr7:86264544-86264563 | MsG0780041083.01.T01:CDS | 40.0% | |
| GTGAAGAACATGGCTATCAA+AGG | - | Chr7:86264028-86264047 | MsG0780041083.01.T01:intron | 40.0% | |
| GTGGGAGAATTACAACTTGA+AGG | - | Chr7:86264944-86264963 | MsG0780041083.01.T01:CDS | 40.0% | |
| TACTGAGGGAGGAAATATGT+GGG | - | Chr7:86264926-86264945 | MsG0780041083.01.T01:CDS | 40.0% | |
| TGTTAAGAGAAGAAGAGTGG+AGG | - | Chr7:86264526-86264545 | MsG0780041083.01.T01:CDS | 40.0% | |
| TTCACAGCTGAAGAAATTGG+TGG | - | Chr7:86264440-86264459 | MsG0780041083.01.T01:intron | 40.0% | |
| TTGATGCTTCAACTGGAAGA+TGG | - | Chr7:86263197-86263216 | MsG0780041083.01.T01:CDS | 40.0% | |
| TTGGGATCAACTTTCTAGGT+AGG | - | Chr7:86263303-86263322 | MsG0780041083.01.T01:CDS | 40.0% | |
| TTTGGGCTAAAGAAAGAGCT+TGG | - | Chr7:86264586-86264605 | MsG0780041083.01.T01:CDS | 40.0% | |
| ! | CGTCAACTTGAAGCCTTATA+TGG | - | Chr7:86264156-86264175 | MsG0780041083.01.T01:intron | 40.0% |
| ! | CTAGAAAGTTGATCCCAAAG+AGG | + | Chr7:86263301-86263320 | None:intergenic | 40.0% |
| ! | GGGAGAGTACAAACAAATGA+TGG | - | Chr7:86264849-86264868 | MsG0780041083.01.T01:CDS | 40.0% |
| ! | TGAGTCTTTTCATTGACGAC+AGG | - | Chr7:86262653-86262672 | MsG0780041083.01.T01:three_prime_UTR | 40.0% |
| !! | ATTGGTGTTGATGCTTCAAC+TGG | - | Chr7:86263190-86263209 | MsG0780041083.01.T01:CDS | 40.0% |
| !! | CCATTCTTGATGAGTACTGA+GGG | - | Chr7:86264912-86264931 | MsG0780041083.01.T01:CDS | 40.0% |
| !! | CTCTTTGGGATCAACTTTCT+AGG | - | Chr7:86263299-86263318 | MsG0780041083.01.T01:CDS | 40.0% |
| !! | GCTGAAACTACTGGTTTCAT+TGG | - | Chr7:86263172-86263191 | MsG0780041083.01.T01:CDS | 40.0% |
| !! | GTACGTAGCATGTGTTACTT+TGG | - | Chr7:86263887-86263906 | MsG0780041083.01.T01:intron | 40.0% |
| AAGACCAAGGAAGGAAAAGC+AGG | - | Chr7:86264102-86264121 | MsG0780041083.01.T01:intron | 45.0% | |
| AAGATGTTAAGCGGCAGAGT+CGG | + | Chr7:86262681-86262700 | None:intergenic | 45.0% | |
| CCCTCAGTACTCATCAAGAA+TGG | + | Chr7:86264915-86264934 | None:intergenic | 45.0% | |
| CGAATTCAGTGGAGTTTGTG+AGG | + | Chr7:86264290-86264309 | None:intergenic | 45.0% | |
| CGATGATGTGTCGAATTCAG+TGG | + | Chr7:86264301-86264320 | None:intergenic | 45.0% | |
| GAACATGGCTATCAAAGGAG+TGG | - | Chr7:86264033-86264052 | MsG0780041083.01.T01:intron | 45.0% | |
| GGAAAAGCAGGAAGACAAGA+TGG | - | Chr7:86264114-86264133 | MsG0780041083.01.T01:intron | 45.0% | |
| GGAGAAGCAAGAAGAATGGT+TGG | - | Chr7:86264461-86264480 | MsG0780041083.01.T01:CDS | 45.0% | |
| GGGTGTTAAGAGAAGAAGAG+TGG | - | Chr7:86264523-86264542 | MsG0780041083.01.T01:CDS | 45.0% | |
| GTACTGAGGGAGGAAATATG+TGG | - | Chr7:86264925-86264944 | MsG0780041083.01.T01:CDS | 45.0% | |
| GTTAACAATGGAGATGGAGC+TGG | - | Chr7:86264789-86264808 | MsG0780041083.01.T01:CDS | 45.0% | |
| TACCAACAATTTCCCTACGG+CGG | - | Chr7:86262946-86262965 | MsG0780041083.01.T01:CDS | 45.0% | |
| TAGTGGAAGAAGCTTCTGGA+AGG | - | Chr7:86264395-86264414 | MsG0780041083.01.T01:intron | 45.0% | |
| TGGTGGAGAAGCAAGAAGAA+TGG | - | Chr7:86264457-86264476 | MsG0780041083.01.T01:CDS | 45.0% | |
| TGTGGGAGTGAAGATGAAGA+AGG | + | Chr7:86264195-86264214 | None:intergenic | 45.0% | |
| ! | CCCATTCTTGATGAGTACTG+AGG | - | Chr7:86264911-86264930 | MsG0780041083.01.T01:CDS | 45.0% |
| ! | TGAAGCACTAGTGGTAGTGT+TGG | + | Chr7:86263125-86263144 | None:intergenic | 45.0% |
| ! | TGAAGGAGTTGAAGCACTAG+TGG | + | Chr7:86263134-86263153 | None:intergenic | 45.0% |
| !! | AGCTAGGGATGCTGCTTTAA+TGG | - | Chr7:86264614-86264633 | MsG0780041083.01.T01:CDS | 45.0% |
| !! | TCTTCCTGCTTTTCCTTCCT+TGG | + | Chr7:86264109-86264128 | None:intergenic | 45.0% |
| !! | TTCTTGATGAGTACTGAGGG+AGG | - | Chr7:86264915-86264934 | MsG0780041083.01.T01:CDS | 45.0% |
| ACAGTAACAGCAGCAACAGC+AGG | + | Chr7:86263085-86263104 | None:intergenic | 50.0% | |
| ATGGGGACCATTACCCTTGT+TGG | - | Chr7:86262620-86262639 | MsG0780041083.01.T01:three_prime_UTR | 50.0% | |
| ! | GGAGTAGTGGAAGAAGCTTC+TGG | - | Chr7:86264391-86264410 | MsG0780041083.01.T01:intron | 50.0% |
| ! | GTGTTGTTGATGTGGGTTGC+CGG | + | Chr7:86262984-86263003 | None:intergenic | 50.0% |
| !! | AGTGGTAGTGTTGGTAGGAG+TGG | + | Chr7:86263116-86263135 | None:intergenic | 50.0% |
| !! | GCACTAGTGGTAGTGTTGGT+AGG | + | Chr7:86263121-86263140 | None:intergenic | 50.0% |
| CTCCGCCGTAGGGAAATTGT+TGG | + | Chr7:86262951-86262970 | None:intergenic | 55.0% | |
| ! | TTGTTGATGTGGGTTGCCGG+CGG | + | Chr7:86262981-86263000 | None:intergenic | 55.0% |
| ! | TGTTGATGTGGGTTGCCGGC+GGG | + | Chr7:86262980-86262999 | None:intergenic | 60.0% |
| CGGGGAATAGCTCCGCCGTA+GGG | + | Chr7:86262961-86262980 | None:intergenic | 65.0% | |
| ! | GTTGATGTGGGTTGCCGGCG+GGG | + | Chr7:86262979-86262998 | None:intergenic | 65.0% |
| ACGGCGGAGCTATTCCCCGC+CGG | - | Chr7:86262962-86262981 | MsG0780041083.01.T01:CDS | 70.0% | |
| GCGGGGAATAGCTCCGCCGT+AGG | + | Chr7:86262962-86262981 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 86262607 | 86265159 | 86262607 | ID=MsG0780041083.01;Name=MsG0780041083.01 |
| Chr7 | mRNA | 86262607 | 86265159 | 86262607 | ID=MsG0780041083.01.T01;Parent=MsG0780041083.01;Name=MsG0780041083.01.T01;_AED=0.18;_eAED=0.18;_QI=187|1|1|1|1|1|2|167|499 |
| Chr7 | exon | 86262607 | 86263746 | 86262607 | ID=MsG0780041083.01.T01:exon:19567;Parent=MsG0780041083.01.T01 |
| Chr7 | exon | 86264446 | 86265159 | 86264446 | ID=MsG0780041083.01.T01:exon:19566;Parent=MsG0780041083.01.T01 |
| Chr7 | five_prime_UTR | 86264973 | 86265159 | 86264973 | ID=MsG0780041083.01.T01:five_prime_utr;Parent=MsG0780041083.01.T01 |
| Chr7 | CDS | 86264446 | 86264972 | 86264446 | ID=MsG0780041083.01.T01:cds;Parent=MsG0780041083.01.T01 |
| Chr7 | CDS | 86262774 | 86263746 | 86262774 | ID=MsG0780041083.01.T01:cds;Parent=MsG0780041083.01.T01 |
| Chr7 | three_prime_UTR | 86262607 | 86262773 | 86262607 | ID=MsG0780041083.01.T01:three_prime_utr;Parent=MsG0780041083.01.T01 |
| Gene Sequence |
| Protein sequence |
