Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036147.01.T01 | XP_024626042.2 | 98.193 | 498 | 9 | 0 | 1 | 498 | 1 | 498 | 0 | 1009 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036147.01.T01 | Q9FLD5 | 61.987 | 463 | 163 | 6 | 1 | 456 | 4 | 460 | 0 | 579 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036147.01.T01 | A0A396GZ58 | 98.193 | 498 | 9 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1009 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047974.01 | MsG0780036147.01 | 0.805976 | 1.029288e-49 | 5.521366e-47 |
| MsG0080048291.01 | MsG0780036147.01 | 0.804280 | 2.330349e-49 | 1.196644e-46 |
| MsG0080048461.01 | MsG0780036147.01 | 0.813932 | 1.993045e-51 | 1.319024e-48 |
| MsG0080048856.01 | MsG0780036147.01 | 0.813008 | 3.181196e-51 | 2.053321e-48 |
| MsG0080049140.01 | MsG0780036147.01 | 0.810243 | 1.270171e-50 | 7.617026e-48 |
| MsG0180000145.01 | MsG0780036147.01 | 0.818948 | 1.501190e-52 | 1.139778e-49 |
| MsG0180000155.01 | MsG0780036147.01 | 0.812148 | 4.904212e-51 | 3.093967e-48 |
| MsG0180000195.01 | MsG0780036147.01 | 0.801002 | 1.105945e-48 | 5.224146e-46 |
| MsG0180000334.01 | MsG0780036147.01 | 0.817449 | 3.278739e-52 | 2.388554e-49 |
| MsG0180000557.01 | MsG0780036147.01 | 0.804738 | 1.870467e-49 | 9.719888e-47 |
| MsG0180000836.01 | MsG0780036147.01 | 0.811771 | 5.925750e-51 | 3.700455e-48 |
| MsG0180001173.01 | MsG0780036147.01 | 0.800231 | 1.588175e-48 | 7.356088e-46 |
| MsG0180001892.01 | MsG0780036147.01 | 0.807477 | 4.959866e-50 | 2.765371e-47 |
| MsG0180002101.01 | MsG0780036147.01 | 0.804454 | 2.143695e-49 | 1.105724e-46 |
| MsG0180002548.01 | MsG0780036147.01 | 0.822754 | 2.000335e-53 | 1.689486e-50 |
| MsG0180003361.01 | MsG0780036147.01 | 0.834782 | 2.455560e-56 | 2.943896e-53 |
| MsG0180003572.01 | MsG0780036147.01 | 0.823717 | 1.191733e-53 | 1.034407e-50 |
| MsG0180003786.01 | MsG0780036147.01 | 0.828591 | 8.257156e-55 | 8.243714e-52 |
| MsG0180003920.01 | MsG0780036147.01 | 0.835085 | 2.060696e-56 | 2.493104e-53 |
| MsG0180004049.01 | MsG0780036147.01 | 0.801172 | 1.020557e-48 | 4.841276e-46 |
| MsG0180004099.01 | MsG0780036147.01 | 0.839655 | 1.391411e-57 | 1.934249e-54 |
| MsG0180004143.01 | MsG0780036147.01 | 0.815316 | 9.842098e-52 | 6.762838e-49 |
| MsG0180004249.01 | MsG0780036147.01 | 0.806437 | 8.228294e-50 | 4.466021e-47 |
| MsG0180004389.01 | MsG0780036147.01 | 0.825778 | 3.892762e-54 | 3.582994e-51 |
| MsG0180004754.01 | MsG0780036147.01 | 0.843576 | 1.286858e-58 | 2.022287e-55 |
| MsG0180005049.01 | MsG0780036147.01 | 0.803880 | 2.822717e-49 | 1.434733e-46 |
| MsG0180005575.01 | MsG0780036147.01 | 0.837173 | 6.076205e-57 | 7.828858e-54 |
| MsG0180006000.01 | MsG0780036147.01 | 0.834495 | 2.899689e-56 | 3.447188e-53 |
| MsG0280010907.01 | MsG0780036147.01 | 0.838581 | 2.641314e-57 | 3.553382e-54 |
| MsG0280011014.01 | MsG0780036147.01 | 0.847924 | 8.498161e-60 | 1.534055e-56 |
| MsG0280011124.01 | MsG0780036147.01 | 0.807037 | 6.145458e-50 | 3.387489e-47 |
| MsG0280011258.01 | MsG0780036147.01 | 0.835372 | 1.743676e-56 | 2.128120e-53 |
| MsG0280011282.01 | MsG0780036147.01 | 0.838883 | 2.206937e-57 | 2.996340e-54 |
| MsG0280011388.01 | MsG0780036147.01 | 0.829958 | 3.847417e-55 | 3.997725e-52 |
| MsG0380011496.01 | MsG0780036147.01 | 0.848602 | 5.519230e-60 | 1.018210e-56 |
| MsG0380011501.01 | MsG0780036147.01 | 0.866354 | 3.031642e-65 | 1.018791e-61 |
| MsG0380012471.01 | MsG0780036147.01 | 0.834660 | 2.635871e-56 | 3.148616e-53 |
| MsG0380013475.01 | MsG0780036147.01 | 0.841058 | 5.981757e-58 | 8.685118e-55 |
| MsG0380013476.01 | MsG0780036147.01 | 0.835040 | 2.114686e-56 | 2.555108e-53 |
| MsG0380014701.01 | MsG0780036147.01 | 0.832934 | 7.121242e-56 | 8.078145e-53 |
| MsG0680030881.01 | MsG0780036147.01 | 0.806320 | 8.709455e-50 | 4.713048e-47 |
| MsG0680031506.01 | MsG0780036147.01 | 0.813876 | 2.050388e-51 | 1.355013e-48 |
| MsG0680031549.01 | MsG0780036147.01 | 0.823755 | 1.167616e-53 | 1.014521e-50 |
| MsG0680031617.01 | MsG0780036147.01 | 0.813052 | 3.111439e-51 | 2.010606e-48 |
| MsG0680032935.01 | MsG0780036147.01 | 0.803564 | 3.282536e-49 | 1.655012e-46 |
| MsG0680034853.01 | MsG0780036147.01 | 0.828580 | 8.305932e-55 | 8.289964e-52 |
| MsG0680035346.01 | MsG0780036147.01 | 0.810390 | 1.180546e-50 | 7.106817e-48 |
| MsG0680035475.01 | MsG0780036147.01 | 0.846571 | 1.998437e-59 | 3.454403e-56 |
| MsG0480018894.01 | MsG0780036147.01 | 0.815281 | 1.001867e-51 | 6.877791e-49 |
| MsG0480018909.01 | MsG0780036147.01 | 0.801464 | 8.892882e-49 | 4.249714e-46 |
| MsG0480018919.01 | MsG0780036147.01 | 0.810043 | 1.402522e-50 | 8.367520e-48 |
| MsG0480019276.01 | MsG0780036147.01 | 0.820793 | 5.685797e-53 | 4.543378e-50 |
| MsG0480019350.01 | MsG0780036147.01 | 0.815473 | 9.080011e-52 | 6.266742e-49 |
| MsG0480019710.01 | MsG0780036147.01 | 0.813941 | 1.983947e-51 | 1.313314e-48 |
| MsG0480019858.01 | MsG0780036147.01 | 0.843739 | 1.164116e-58 | 1.838669e-55 |
| MsG0480019922.01 | MsG0780036147.01 | 0.858194 | 9.736133e-63 | 2.464668e-59 |
| MsG0480020495.01 | MsG0780036147.01 | 0.836207 | 1.071471e-56 | 1.341190e-53 |
| MsG0480020739.01 | MsG0780036147.01 | 0.812101 | 5.021061e-51 | 3.163516e-48 |
| MsG0480020780.01 | MsG0780036147.01 | 0.844869 | 5.787461e-59 | 9.470600e-56 |
| MsG0480020909.01 | MsG0780036147.01 | 0.806294 | 8.819858e-50 | 4.769701e-47 |
| MsG0480021452.01 | MsG0780036147.01 | 0.830122 | 3.507642e-55 | 3.661943e-52 |
| MsG0480022164.01 | MsG0780036147.01 | 0.807737 | 4.367908e-50 | 2.451895e-47 |
| MsG0480022325.01 | MsG0780036147.01 | 0.813256 | 2.806665e-51 | 1.823714e-48 |
| MsG0480022620.01 | MsG0780036147.01 | 0.836188 | 1.083463e-56 | 1.355360e-53 |
| MsG0480022796.01 | MsG0780036147.01 | 0.800053 | 1.725808e-48 | 7.957755e-46 |
| MsG0480023172.01 | MsG0780036147.01 | 0.822485 | 2.310217e-53 | 1.936270e-50 |
| MsG0480023600.01 | MsG0780036147.01 | 0.802146 | 6.442792e-49 | 3.132612e-46 |
| MsG0480023657.01 | MsG0780036147.01 | 0.814856 | 1.245055e-51 | 8.448684e-49 |
| MsG0580024129.01 | MsG0780036147.01 | 0.814743 | 1.318679e-51 | 8.921236e-49 |
| MsG0580024330.01 | MsG0780036147.01 | 0.804152 | 2.477234e-49 | 1.267942e-46 |
| MsG0580024489.01 | MsG0780036147.01 | 0.838699 | 2.462219e-57 | 3.324391e-54 |
| MsG0580024758.01 | MsG0780036147.01 | 0.800144 | 1.654357e-48 | 7.645817e-46 |
| MsG0580026059.01 | MsG0780036147.01 | 0.820894 | 5.388530e-53 | 4.318229e-50 |
| MsG0580026075.01 | MsG0780036147.01 | 0.827462 | 1.544039e-54 | 1.491730e-51 |
| MsG0380015332.01 | MsG0780036147.01 | 0.837830 | 4.122784e-57 | 5.420917e-54 |
| MsG0380015555.01 | MsG0780036147.01 | 0.809040 | 2.302933e-50 | 1.337802e-47 |
| MsG0380015663.01 | MsG0780036147.01 | 0.812961 | 3.256662e-51 | 2.099317e-48 |
| MsG0380015677.01 | MsG0780036147.01 | 0.836987 | 6.781242e-57 | 8.688221e-54 |
| MsG0380015944.01 | MsG0780036147.01 | 0.830136 | 3.481052e-55 | 3.635674e-52 |
| MsG0380016131.01 | MsG0780036147.01 | 0.810908 | 9.122934e-51 | 5.568889e-48 |
| MsG0380016199.01 | MsG0780036147.01 | 0.817368 | 3.419907e-52 | 2.485777e-49 |
| MsG0380016247.01 | MsG0780036147.01 | 0.843948 | 1.023421e-58 | 1.627173e-55 |
| MsG0380016517.01 | MsG0780036147.01 | 0.814941 | 1.192315e-51 | 8.109289e-49 |
| MsG0380016703.01 | MsG0780036147.01 | 0.807329 | 5.331517e-50 | 2.961193e-47 |
| MsG0380016765.01 | MsG0780036147.01 | 0.811470 | 6.889625e-51 | 4.268391e-48 |
| MsG0380016970.01 | MsG0780036147.01 | 0.843528 | 1.325588e-58 | 2.079844e-55 |
| MsG0380016994.01 | MsG0780036147.01 | 0.816840 | 4.493288e-52 | 3.219180e-49 |
| MsG0380017159.01 | MsG0780036147.01 | 0.803863 | 2.845937e-49 | 1.445899e-46 |
| MsG0380017869.01 | MsG0780036147.01 | 0.828681 | 7.855638e-55 | 7.863289e-52 |
| MsG0480018313.01 | MsG0780036147.01 | 0.823610 | 1.262734e-53 | 1.092563e-50 |
| MsG0580026593.01 | MsG0780036147.01 | 0.835302 | 1.816563e-56 | 2.212623e-53 |
| MsG0580026610.01 | MsG0780036147.01 | 0.855155 | 7.625405e-62 | 1.743856e-58 |
| MsG0580027091.01 | MsG0780036147.01 | 0.826698 | 2.351915e-54 | 2.222035e-51 |
| MsG0580027320.01 | MsG0780036147.01 | 0.837251 | 5.802127e-57 | 7.492934e-54 |
| MsG0580027431.01 | MsG0780036147.01 | 0.824207 | 9.147783e-54 | 8.049426e-51 |
| MsG0580027798.01 | MsG0780036147.01 | 0.803119 | 4.058340e-49 | 2.022699e-46 |
| MsG0580027925.01 | MsG0780036147.01 | 0.860861 | 1.537362e-63 | 4.263793e-60 |
| MsG0580028060.01 | MsG0780036147.01 | 0.809770 | 1.605762e-50 | 9.511879e-48 |
| MsG0580028176.01 | MsG0780036147.01 | 0.804761 | 1.849421e-49 | 9.615915e-47 |
| MsG0580028436.01 | MsG0780036147.01 | 0.846112 | 2.665262e-59 | 4.538998e-56 |
| MsG0580028517.01 | MsG0780036147.01 | 0.805823 | 1.108239e-49 | 5.921585e-47 |
| MsG0580029127.01 | MsG0780036147.01 | 0.804551 | 2.046241e-49 | 1.058088e-46 |
| MsG0580029640.01 | MsG0780036147.01 | 0.822842 | 1.908298e-53 | 1.615720e-50 |
| MsG0580029729.01 | MsG0780036147.01 | 0.808037 | 3.770740e-50 | 2.133304e-47 |
| MsG0680030447.01 | MsG0780036147.01 | 0.823499 | 1.340308e-53 | 1.156088e-50 |
| MsG0680030615.01 | MsG0780036147.01 | 0.803419 | 3.517361e-49 | 1.766718e-46 |
| MsG0680030674.01 | MsG0780036147.01 | 0.803535 | 3.328724e-49 | 1.676998e-46 |
| MsG0280007414.01 | MsG0780036147.01 | 0.818163 | 2.262353e-52 | 1.680634e-49 |
| MsG0280007452.01 | MsG0780036147.01 | 0.825803 | 3.840942e-54 | 3.537717e-51 |
| MsG0280007506.01 | MsG0780036147.01 | 0.823187 | 1.585256e-53 | 1.355317e-50 |
| MsG0280007955.01 | MsG0780036147.01 | 0.827720 | 1.338487e-54 | 1.302830e-51 |
| MsG0280008378.01 | MsG0780036147.01 | 0.820469 | 6.747166e-53 | 5.343439e-50 |
| MsG0280008457.01 | MsG0780036147.01 | 0.835796 | 1.362156e-56 | 1.683644e-53 |
| MsG0280009794.01 | MsG0780036147.01 | 0.838304 | 3.114485e-57 | 4.154094e-54 |
| MsG0280010015.01 | MsG0780036147.01 | 0.811673 | 6.224898e-51 | 3.876893e-48 |
| MsG0280010176.01 | MsG0780036147.01 | 0.840070 | 1.084707e-57 | 1.527753e-54 |
| MsG0280010489.01 | MsG0780036147.01 | 0.830040 | 3.674057e-55 | 3.826524e-52 |
| MsG0280010491.01 | MsG0780036147.01 | 0.831013 | 2.123578e-55 | 2.275605e-52 |
| MsG0280010533.01 | MsG0780036147.01 | 0.830300 | 3.174538e-55 | 3.331129e-52 |
| MsG0680035806.01 | MsG0780036147.01 | 0.806294 | 8.819186e-50 | 4.769346e-47 |
| MsG0780035979.01 | MsG0780036147.01 | 0.816618 | 5.040782e-52 | 3.589397e-49 |
| MsG0780036147.01 | MsG0780036477.01 | 0.828828 | 7.234229e-55 | 7.272255e-52 |
| MsG0780036147.01 | MsG0780036663.01 | 0.800573 | 1.353009e-48 | 6.321573e-46 |
| MsG0780036147.01 | MsG0780036719.01 | 0.801707 | 7.930535e-49 | 3.813062e-46 |
| MsG0780036147.01 | MsG0780036752.01 | 0.810657 | 1.033634e-50 | 6.267198e-48 |
| MsG0780036147.01 | MsG0780036815.01 | 0.859453 | 4.092776e-63 | 1.081490e-59 |
| MsG0780036147.01 | MsG0780037054.01 | 0.810910 | 9.113568e-51 | 5.563462e-48 |
| MsG0780036147.01 | MsG0780038188.01 | 0.806240 | 9.055856e-50 | 4.890709e-47 |
| MsG0780036147.01 | MsG0780038424.01 | 0.851234 | 1.013164e-60 | 2.037252e-57 |
| MsG0780036147.01 | MsG0780038603.01 | 0.834746 | 2.508540e-56 | 3.004123e-53 |
| MsG0780036147.01 | MsG0780038648.01 | 0.806078 | 9.794899e-50 | 5.267858e-47 |
| MsG0780036147.01 | MsG0780038691.01 | 0.807470 | 4.977027e-50 | 2.774525e-47 |
| MsG0780036147.01 | MsG0780039137.01 | 0.815851 | 7.477946e-52 | 5.214102e-49 |
| MsG0780036147.01 | MsG0780039170.01 | 0.807316 | 5.366094e-50 | 2.979416e-47 |
| MsG0780036147.01 | MsG0780039243.01 | 0.807516 | 4.866784e-50 | 2.716258e-47 |
| MsG0780036147.01 | MsG0780039443.01 | 0.837502 | 5.005508e-57 | 6.515262e-54 |
| MsG0780036147.01 | MsG0780039866.01 | 0.813852 | 2.075343e-51 | 1.370552e-48 |
| MsG0780036147.01 | MsG0780040529.01 | 0.812629 | 3.850228e-51 | 2.460425e-48 |
| MsG0780036147.01 | MsG0780040841.01 | 0.808171 | 3.530762e-50 | 2.004803e-47 |
| MsG0780036147.01 | MsG0780040926.01 | 0.821210 | 4.557110e-53 | 3.684298e-50 |
| MsG0780036147.01 | MsG0780041063.01 | 0.800101 | 1.687477e-48 | 7.790420e-46 |
| MsG0780036147.01 | MsG0780041083.01 | 0.807355 | 5.264471e-50 | 2.925867e-47 |
| MsG0780036147.01 | MsG0780041535.01 | 0.808141 | 3.583731e-50 | 2.033187e-47 |
| MsG0780036147.01 | MsG0780041559.01 | 0.825885 | 3.672921e-54 | 3.390903e-51 |
| MsG0780036147.01 | MsG0880041986.01 | 0.813130 | 2.990551e-51 | 1.936539e-48 |
| MsG0780036147.01 | MsG0880042380.01 | 0.802455 | 5.565904e-49 | 2.727653e-46 |
| MsG0780036147.01 | MsG0880042520.01 | 0.803659 | 3.137434e-49 | 1.585548e-46 |
| MsG0780036147.01 | MsG0880042547.01 | 0.803906 | 2.787214e-49 | 1.417673e-46 |
| MsG0780036147.01 | MsG0880042552.01 | 0.810843 | 9.424054e-51 | 5.742543e-48 |
| MsG0780036147.01 | MsG0880042779.01 | 0.826175 | 3.133820e-54 | 2.917084e-51 |
| MsG0780036147.01 | MsG0880042961.01 | 0.845336 | 4.328850e-59 | 7.190591e-56 |
| MsG0780036147.01 | MsG0880043034.01 | 0.800238 | 1.583239e-48 | 7.334505e-46 |
| MsG0780036147.01 | MsG0880043480.01 | 0.801993 | 6.926922e-49 | 3.354792e-46 |
| MsG0780036147.01 | MsG0880044782.01 | 0.872007 | 4.426862e-67 | 1.822417e-63 |
| MsG0780036147.01 | MsG0880045145.01 | 0.800314 | 1.527655e-48 | 7.091124e-46 |
| MsG0780036147.01 | MsG0880045235.01 | 0.800859 | 1.182936e-48 | 5.567371e-46 |
| MsG0780036147.01 | MsG0880045393.01 | 0.805309 | 1.420669e-49 | 7.491106e-47 |
| MsG0780036147.01 | MsG0880045453.01 | 0.805424 | 1.344088e-49 | 7.108227e-47 |
| MsG0780036147.01 | MsG0880045965.01 | 0.813015 | 3.170153e-51 | 2.046584e-48 |
| MsG0780036147.01 | MsG0880046565.01 | 0.809542 | 1.797167e-50 | 1.058108e-47 |
| MsG0780036147.01 | MsG0880047472.01 | 0.817991 | 2.473652e-52 | 1.828993e-49 |
| MsG0780036147.01 | MsG0880047473.01 | 0.823145 | 1.621767e-53 | 1.384978e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036147.01.T01 | MTR_7g008040 | 97.984 | 496 | 10 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1001 |
| MsG0780036147.01.T01 | MTR_6g009540 | 66.523 | 463 | 146 | 4 | 1 | 460 | 3 | 459 | 0.0 | 630 |
| MsG0780036147.01.T01 | MTR_6g009520 | 66.955 | 463 | 144 | 4 | 1 | 460 | 5 | 461 | 0.0 | 627 |
| MsG0780036147.01.T01 | MTR_4g107370 | 58.696 | 506 | 197 | 4 | 1 | 495 | 6 | 510 | 0.0 | 603 |
| MsG0780036147.01.T01 | MTR_1g022250 | 61.807 | 487 | 160 | 8 | 2 | 485 | 4 | 467 | 0.0 | 594 |
| MsG0780036147.01.T01 | MTR_6g009720 | 63.462 | 468 | 158 | 4 | 1 | 459 | 5 | 468 | 0.0 | 585 |
| MsG0780036147.01.T01 | MTR_2g030420 | 59.623 | 478 | 172 | 6 | 2 | 477 | 7 | 465 | 0.0 | 578 |
| MsG0780036147.01.T01 | MTR_6g009553 | 63.778 | 450 | 147 | 5 | 23 | 460 | 3 | 448 | 0.0 | 566 |
| MsG0780036147.01.T01 | MTR_6g009770 | 61.489 | 470 | 144 | 5 | 1 | 460 | 5 | 447 | 0.0 | 555 |
| MsG0780036147.01.T01 | MTR_6g042290 | 60.659 | 455 | 153 | 6 | 8 | 460 | 21 | 451 | 0.0 | 543 |
| MsG0780036147.01.T01 | MTR_6g009510 | 53.707 | 499 | 146 | 7 | 7 | 489 | 20 | 449 | 1.08e-174 | 499 |
| MsG0780036147.01.T01 | MTR_1g022245 | 52.586 | 464 | 211 | 4 | 1 | 459 | 1 | 460 | 5.01e-174 | 499 |
| MsG0780036147.01.T01 | MTR_6g009660 | 54.095 | 464 | 149 | 9 | 4 | 460 | 5 | 411 | 6.19e-158 | 457 |
| MsG0780036147.01.T01 | MTR_4g128260 | 42.857 | 455 | 231 | 10 | 1 | 440 | 1 | 441 | 1.21e-118 | 358 |
| MsG0780036147.01.T01 | MTR_5g020980 | 39.959 | 483 | 243 | 10 | 2 | 472 | 11 | 458 | 2.94e-117 | 354 |
| MsG0780036147.01.T01 | MTR_2g076710 | 38.723 | 470 | 246 | 8 | 10 | 471 | 14 | 449 | 7.83e-111 | 336 |
| MsG0780036147.01.T01 | MTR_2g061820 | 38.641 | 471 | 256 | 9 | 1 | 464 | 4 | 448 | 1.20e-110 | 338 |
| MsG0780036147.01.T01 | MTR_2g076920 | 38.922 | 501 | 238 | 11 | 8 | 487 | 13 | 466 | 3.00e-110 | 335 |
| MsG0780036147.01.T01 | MTR_2g076970 | 39.574 | 470 | 237 | 10 | 8 | 469 | 7 | 437 | 5.17e-109 | 332 |
| MsG0780036147.01.T01 | MTR_2g076690 | 40.471 | 467 | 231 | 10 | 10 | 468 | 16 | 443 | 5.20e-109 | 332 |
| MsG0780036147.01.T01 | MTR_2g076840 | 39.875 | 479 | 237 | 11 | 8 | 477 | 7 | 443 | 1.37e-106 | 334 |
| MsG0780036147.01.T01 | MTR_2g076840 | 50.190 | 263 | 105 | 3 | 198 | 460 | 467 | 703 | 2.10e-80 | 265 |
| MsG0780036147.01.T01 | MTR_8g076920 | 37.778 | 495 | 261 | 8 | 9 | 487 | 28 | 491 | 9.74e-106 | 325 |
| MsG0780036147.01.T01 | MTR_2g076900 | 38.289 | 491 | 247 | 12 | 8 | 487 | 7 | 452 | 1.39e-103 | 318 |
| MsG0780036147.01.T01 | MTR_2g076990 | 40.380 | 421 | 208 | 8 | 61 | 473 | 1 | 386 | 1.18e-99 | 307 |
| MsG0780036147.01.T01 | MTR_5g020990 | 36.214 | 486 | 264 | 9 | 5 | 472 | 25 | 482 | 5.17e-93 | 291 |
| MsG0780036147.01.T01 | MTR_3g103150 | 42.345 | 307 | 141 | 5 | 156 | 460 | 4 | 276 | 3.00e-79 | 249 |
| MsG0780036147.01.T01 | MTR_7g117950 | 34.324 | 370 | 183 | 10 | 93 | 460 | 94 | 405 | 2.30e-63 | 213 |
| MsG0780036147.01.T01 | MTR_3g092060 | 31.989 | 372 | 195 | 8 | 95 | 460 | 95 | 414 | 1.27e-59 | 204 |
| MsG0780036147.01.T01 | MTR_5g021020 | 35.604 | 323 | 154 | 8 | 140 | 460 | 135 | 405 | 1.07e-51 | 181 |
| MsG0780036147.01.T01 | MTR_8g027200 | 28.358 | 469 | 240 | 13 | 39 | 485 | 38 | 432 | 1.35e-51 | 182 |
| MsG0780036147.01.T01 | MTR_1g011680 | 64.885 | 131 | 43 | 1 | 332 | 459 | 3 | 133 | 2.14e-50 | 170 |
| MsG0780036147.01.T01 | MTR_5g021000 | 50.926 | 108 | 48 | 2 | 355 | 460 | 1 | 105 | 8.16e-30 | 115 |
| MsG0780036147.01.T01 | MTR_5g020720 | 36.364 | 187 | 92 | 5 | 262 | 446 | 25 | 186 | 4.74e-27 | 108 |
| MsG0780036147.01.T01 | MTR_1g113750 | 54.455 | 101 | 43 | 2 | 388 | 485 | 16 | 116 | 1.66e-24 | 99.0 |
| MsG0780036147.01.T01 | MTR_5g021010 | 47.826 | 92 | 43 | 2 | 372 | 461 | 34 | 122 | 7.53e-18 | 80.1 |
| MsG0780036147.01.T01 | MTR_2g076820 | 55.769 | 52 | 23 | 0 | 388 | 439 | 1 | 52 | 5.90e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036147.01.T01 | AT5G40010 | 61.987 | 463 | 163 | 6 | 1 | 456 | 4 | 460 | 0.0 | 579 |
| MsG0780036147.01.T01 | AT3G28580 | 60.652 | 460 | 169 | 6 | 1 | 456 | 4 | 455 | 0.0 | 560 |
| MsG0780036147.01.T01 | AT3G28580 | 56.957 | 460 | 164 | 7 | 1 | 456 | 4 | 433 | 0.0 | 516 |
| MsG0780036147.01.T01 | AT3G28510 | 55.508 | 463 | 195 | 5 | 4 | 463 | 7 | 461 | 1.02e-179 | 515 |
| MsG0780036147.01.T01 | AT3G28610 | 52.352 | 489 | 192 | 10 | 8 | 481 | 6 | 468 | 2.33e-171 | 491 |
| MsG0780036147.01.T01 | AT3G28540 | 53.947 | 456 | 202 | 4 | 4 | 458 | 7 | 455 | 5.04e-170 | 489 |
| MsG0780036147.01.T01 | AT3G28600 | 52.282 | 482 | 188 | 8 | 8 | 474 | 7 | 461 | 5.28e-170 | 488 |
| MsG0780036147.01.T01 | AT3G28540 | 53.947 | 456 | 202 | 4 | 4 | 458 | 7 | 455 | 6.42e-170 | 489 |
| MsG0780036147.01.T01 | AT5G40000 | 49.287 | 491 | 201 | 12 | 1 | 474 | 4 | 463 | 1.63e-157 | 456 |
| MsG0780036147.01.T01 | AT3G28520 | 50.725 | 483 | 210 | 6 | 12 | 477 | 1 | 472 | 7.01e-154 | 447 |
| MsG0780036147.01.T01 | AT3G28600 | 48.133 | 482 | 169 | 7 | 8 | 474 | 7 | 422 | 7.85e-148 | 430 |
| MsG0780036147.01.T01 | AT3G28570 | 46.502 | 486 | 200 | 9 | 6 | 472 | 7 | 451 | 2.86e-144 | 422 |
| MsG0780036147.01.T01 | AT3G28570 | 46.502 | 486 | 200 | 9 | 6 | 472 | 14 | 458 | 3.20e-144 | 422 |
| MsG0780036147.01.T01 | AT5G57480 | 38.446 | 489 | 268 | 10 | 1 | 473 | 1 | 472 | 1.70e-115 | 350 |
| MsG0780036147.01.T01 | AT4G25835 | 39.451 | 474 | 266 | 10 | 1 | 468 | 1 | 459 | 3.16e-114 | 347 |
| MsG0780036147.01.T01 | AT3G50930 | 39.506 | 486 | 253 | 8 | 16 | 485 | 73 | 533 | 4.85e-112 | 343 |
| MsG0780036147.01.T01 | AT3G50940 | 38.581 | 451 | 233 | 7 | 20 | 463 | 31 | 444 | 2.48e-109 | 332 |
| MsG0780036147.01.T01 | AT2G18193 | 37.705 | 488 | 265 | 8 | 9 | 492 | 19 | 471 | 2.44e-107 | 328 |
| MsG0780036147.01.T01 | AT4G30250 | 38.382 | 482 | 268 | 9 | 1 | 468 | 3 | 469 | 9.57e-106 | 325 |
| MsG0780036147.01.T01 | AT4G30250 | 38.382 | 482 | 268 | 9 | 1 | 468 | 1 | 467 | 1.40e-105 | 325 |
| MsG0780036147.01.T01 | AT4G05380 | 38.155 | 477 | 261 | 7 | 1 | 472 | 12 | 459 | 9.92e-105 | 321 |
| MsG0780036147.01.T01 | AT5G17740 | 35.818 | 483 | 267 | 10 | 2 | 472 | 11 | 462 | 5.05e-99 | 308 |
| MsG0780036147.01.T01 | AT5G17760 | 40.376 | 426 | 198 | 8 | 64 | 468 | 72 | 462 | 1.11e-97 | 304 |
| MsG0780036147.01.T01 | AT2G18190 | 36.076 | 474 | 267 | 7 | 2 | 471 | 13 | 454 | 2.98e-97 | 303 |
| MsG0780036147.01.T01 | AT1G43910 | 38.302 | 483 | 255 | 10 | 1 | 468 | 1 | 455 | 7.95e-96 | 298 |
| MsG0780036147.01.T01 | AT5G17730 | 34.958 | 472 | 261 | 7 | 6 | 465 | 11 | 448 | 5.54e-94 | 293 |
| MsG0780036147.01.T01 | AT5G17750 | 38.859 | 368 | 182 | 7 | 71 | 426 | 55 | 391 | 2.05e-83 | 263 |
| MsG0780036147.01.T01 | AT2G46620 | 31.828 | 465 | 263 | 8 | 1 | 460 | 1 | 416 | 4.70e-74 | 242 |
| MsG0780036147.01.T01 | AT5G17760 | 39.051 | 274 | 139 | 5 | 64 | 320 | 72 | 334 | 4.70e-54 | 185 |
| MsG0780036147.01.T01 | AT3G29800 | 31.389 | 360 | 185 | 9 | 103 | 457 | 75 | 377 | 1.58e-49 | 176 |
| MsG0780036147.01.T01 | AT3G28560 | 39.908 | 218 | 111 | 5 | 4 | 213 | 7 | 212 | 2.15e-45 | 160 |
| MsG0780036147.01.T01 | AT4G05340 | 50.000 | 92 | 39 | 1 | 328 | 412 | 2 | 93 | 3.10e-20 | 85.9 |
Find 68 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACGCGGTTATTTACTTTA+TGG | 0.206027 | 7:+3579103 | MsG0780036147.01.T01:CDS |
| GGTTCTTGTTAAGAATTATT+TGG | 0.226983 | 7:+3579597 | MsG0780036147.01.T01:CDS |
| GACTTCAGCTTTGAGTCTTT+TGG | 0.239776 | 7:-3578633 | None:intergenic |
| CATGATTTGTTTGATGAAAT+TGG | 0.246773 | 7:+3579631 | MsG0780036147.01.T01:CDS |
| TTTCATTGTGACAGTGAAAA+AGG | 0.267935 | 7:+3579849 | MsG0780036147.01.T01:CDS |
| GTCTTTCACCTGAGAATTCA+TGG | 0.273148 | 7:-3578547 | None:intergenic |
| GAACATTATGGTGGCTAGTA+TGG | 0.297567 | 7:-3578417 | None:intergenic |
| AGCTAAGTATGAGTGAACTA+TGG | 0.321937 | 7:+3578381 | None:intergenic |
| AACTTGATCCTGCTCTTATT+AGG | 0.329188 | 7:+3579518 | MsG0780036147.01.T01:CDS |
| AGAATTCATGGAAAGTGATT+TGG | 0.342817 | 7:-3578535 | None:intergenic |
| AATAGTAAGGTAACTTTATC+CGG | 0.351589 | 7:+3579415 | MsG0780036147.01.T01:CDS |
| ATAGTAGATTTACCTGTTCC+TGG | 0.352380 | 7:-3579130 | None:intergenic |
| GTGGAAGATGTGAAGGAAAA+TGG | 0.360536 | 7:+3579826 | MsG0780036147.01.T01:CDS |
| ATCAATAAAATTCAATAAAC+CGG | 0.362700 | 7:-3579434 | None:intergenic |
| TATGGCATACATGAACATTA+TGG | 0.377040 | 7:-3578429 | None:intergenic |
| ATGGTTACAAACAATCAAAA+TGG | 0.386452 | 7:+3578945 | MsG0780036147.01.T01:CDS |
| TCTTGAATTAACCGCGGTTA+AGG | 0.395319 | 7:+3579195 | MsG0780036147.01.T01:CDS |
| TAACCATACCAACCACTACT+TGG | 0.406082 | 7:-3578929 | None:intergenic |
| AATTTCAAGGTGTTAAGCTT+TGG | 0.409358 | 7:+3578717 | MsG0780036147.01.T01:CDS |
| CTTTATGGTCCTCCAGGAAC+AGG | 0.413204 | 7:+3579118 | MsG0780036147.01.T01:CDS |
| TGGAAAGTGATTTGGATGTA+AGG | 0.435023 | 7:-3578527 | None:intergenic |
| ATCACTTTCCATGAATTCTC+AGG | 0.451974 | 7:+3578539 | MsG0780036147.01.T01:CDS |
| TGAGGAAGAAGACTCATTCA+TGG | 0.460140 | 7:+3579339 | MsG0780036147.01.T01:CDS |
| TTTGAAGTTTAGAAATGGTA+AGG | 0.467899 | 7:+3579051 | MsG0780036147.01.T01:CDS |
| TTCAAGGTGTTAAGCTTTGG+TGG | 0.472961 | 7:+3578720 | MsG0780036147.01.T01:CDS |
| TGATGAAATTGGTGATTTGT+TGG | 0.479236 | 7:+3579642 | MsG0780036147.01.T01:CDS |
| GAAGTCACAGATGAATTTCA+AGG | 0.493727 | 7:+3578704 | MsG0780036147.01.T01:CDS |
| TATTTACTTTATGGTCCTCC+AGG | 0.495610 | 7:+3579112 | MsG0780036147.01.T01:CDS |
| AATCCAAGTAGTGGTTGGTA+TGG | 0.518519 | 7:+3578926 | MsG0780036147.01.T01:CDS |
| GTATCTCTTATAATTAGAAA+AGG | 0.519504 | 7:-3578783 | None:intergenic |
| AAATTCTCAGCAACATCAGC+AGG | 0.526229 | 7:-3579682 | None:intergenic |
| AATTAACAACTTTCTTAACT+CGG | 0.528092 | 7:-3579224 | None:intergenic |
| CTTCCTGTCCTAATAAGAGC+AGG | 0.535295 | 7:-3579526 | None:intergenic |
| GGAAAGTGATTTGGATGTAA+GGG | 0.538609 | 7:-3578526 | None:intergenic |
| CAAATAATCCAAGTAGTGGT+TGG | 0.539028 | 7:+3578921 | MsG0780036147.01.T01:CDS |
| ATCTACTATGATAGCCGCTA+TGG | 0.541351 | 7:+3579144 | MsG0780036147.01.T01:CDS |
| AAAAGATAGTCAAAATCCAT+TGG | 0.544634 | 7:+3578658 | MsG0780036147.01.T01:CDS |
| GATCCTGCTCTTATTAGGAC+AGG | 0.549073 | 7:+3579523 | MsG0780036147.01.T01:CDS |
| ATCGGTAAGGCTTGGAAACG+CGG | 0.549524 | 7:+3579088 | MsG0780036147.01.T01:CDS |
| TCAAGGTGTTAAGCTTTGGT+GGG | 0.552548 | 7:+3578721 | MsG0780036147.01.T01:CDS |
| ACATCTTCATTCACAGACTT+AGG | 0.556783 | 7:-3579709 | None:intergenic |
| AAAAGGATATAGTTCTGTGA+TGG | 0.559391 | 7:+3579866 | MsG0780036147.01.T01:CDS |
| TCATCAATGCTAAGAACCAA+TGG | 0.561072 | 7:-3578674 | None:intergenic |
| ACAAGAAGTAGAAGAAGACA+AGG | 0.563981 | 7:+3579786 | MsG0780036147.01.T01:CDS |
| TATACAAATAATCCAAGTAG+TGG | 0.565102 | 7:+3578917 | MsG0780036147.01.T01:CDS |
| GCTAAGTATGAGTGAACTAT+GGG | 0.567082 | 7:+3578382 | None:intergenic |
| GCAAGTGTCTCAAAAGTCGC+AGG | 0.578088 | 7:-3578989 | None:intergenic |
| AGACTATCACGAAATGAAGA+TGG | 0.578620 | 7:-3578467 | None:intergenic |
| GGTCCGCGTGTGGAGGAGAG+AGG | 0.586140 | 7:+3579464 | MsG0780036147.01.T01:CDS |
| ATTTGATTCAAGCACTTGAG+AGG | 0.587639 | 7:+3579749 | MsG0780036147.01.T01:CDS |
| CTGCTCTTATTAGGACAGGA+AGG | 0.593973 | 7:+3579527 | MsG0780036147.01.T01:CDS |
| TCTTATTAGGACAGGAAGGA+TGG | 0.597653 | 7:+3579531 | MsG0780036147.01.T01:CDS |
| GAAGACAAGGAAGATAGTGT+AGG | 0.600054 | 7:+3579799 | MsG0780036147.01.T01:CDS |
| TCAAGCACTTGAGAGGAAGA+AGG | 0.600486 | 7:+3579756 | MsG0780036147.01.T01:CDS |
| AAAATTGAAACTTCATCACA+TGG | 0.601556 | 7:+3578752 | MsG0780036147.01.T01:CDS |
| AGTGAACTATGGGCACAACT+AGG | 0.614578 | 7:+3578392 | MsG0780036147.01.T01:CDS |
| AGGAACTGTGGAAGATGTGA+AGG | 0.615776 | 7:+3579819 | MsG0780036147.01.T01:CDS |
| GGAAGATAGTGTAGGAACTG+TGG | 0.624422 | 7:+3579807 | MsG0780036147.01.T01:CDS |
| GATGGAATTTGGTCCGCGTG+TGG | 0.633363 | 7:+3579454 | MsG0780036147.01.T01:CDS |
| TTGCAATGAGAAATAGACAA+AGG | 0.635194 | 7:+3578888 | MsG0780036147.01.T01:CDS |
| GGAATTTGGTCCGCGTGTGG+AGG | 0.645589 | 7:+3579457 | MsG0780036147.01.T01:CDS |
| AGCACTTGAGAGGAAGAAGG+TGG | 0.649097 | 7:+3579759 | MsG0780036147.01.T01:CDS |
| AATCCTCTCTCCTCCACACG+CGG | 0.650999 | 7:-3579467 | None:intergenic |
| GGCATACATGAACATTATGG+TGG | 0.652895 | 7:-3578426 | None:intergenic |
| CTCGGTATTATCCTTAACCG+CGG | 0.675125 | 7:-3579206 | None:intergenic |
| GTTCATGAAATTCGCCATAG+CGG | 0.682175 | 7:-3579158 | None:intergenic |
| GTAGATTTACCTGTTCCTGG+AGG | 0.701492 | 7:-3579127 | None:intergenic |
| TTATGATCTTGAATTAACCG+CGG | 0.736452 | 7:+3579189 | MsG0780036147.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAAAAATGAAAAAAATG+AGG | + | Chr7:3579321-3579340 | MsG0780036147.01.T01:CDS | 10.0% |
| !! | AACAAAAAGATTATTATCAT+AGG | + | Chr7:3579362-3579381 | MsG0780036147.01.T01:CDS | 15.0% |
| !! | ATCAATAAAATTCAATAAAC+CGG | - | Chr7:3579437-3579456 | None:intergenic | 15.0% |
| !! | GAATAATAGTAAAAATAGTA+AGG | + | Chr7:3579402-3579421 | MsG0780036147.01.T01:CDS | 15.0% |
| !! | AATTAACAACTTTCTTAACT+CGG | - | Chr7:3579227-3579246 | None:intergenic | 20.0% |
| !! | GTATCTCTTATAATTAGAAA+AGG | - | Chr7:3578786-3578805 | None:intergenic | 20.0% |
| !! | TTATTATCATAGGAAAAAAG+AGG | + | Chr7:3579372-3579391 | MsG0780036147.01.T01:CDS | 20.0% |
| !!! | GGTTTATTGAATTTTATTGA+TGG | + | Chr7:3579436-3579455 | MsG0780036147.01.T01:CDS | 20.0% |
| !!! | TGAATTTTATTGATGGAATT+TGG | + | Chr7:3579443-3579462 | MsG0780036147.01.T01:CDS | 20.0% |
| ! | AAAAGATAGTCAAAATCCAT+TGG | + | Chr7:3578658-3578677 | MsG0780036147.01.T01:CDS | 25.0% |
| ! | AAAATTGAAACTTCATCACA+TGG | + | Chr7:3578752-3578771 | MsG0780036147.01.T01:CDS | 25.0% |
| ! | AAGGACTATTATGCAAAAAT+CGG | + | Chr7:3579070-3579089 | MsG0780036147.01.T01:CDS | 25.0% |
| ! | AATAGTAAGGTAACTTTATC+CGG | + | Chr7:3579415-3579434 | MsG0780036147.01.T01:CDS | 25.0% |
| ! | ATGGTTACAAACAATCAAAA+TGG | + | Chr7:3578945-3578964 | MsG0780036147.01.T01:CDS | 25.0% |
| ! | GGTTCTTGTTAAGAATTATT+TGG | + | Chr7:3579597-3579616 | MsG0780036147.01.T01:CDS | 25.0% |
| ! | TATACAAATAATCCAAGTAG+TGG | + | Chr7:3578917-3578936 | MsG0780036147.01.T01:CDS | 25.0% |
| ! | TGGTAAAAAACGTTCAATTA+TGG | - | Chr7:3578450-3578469 | None:intergenic | 25.0% |
| !! | CATTTTTATTAATCTTCCTC+TGG | - | Chr7:3579312-3579331 | None:intergenic | 25.0% |
| !! | TTTGAAGTTTAGAAATGGTA+AGG | + | Chr7:3579051-3579070 | MsG0780036147.01.T01:CDS | 25.0% |
| !!! | CATGATTTGTTTGATGAAAT+TGG | + | Chr7:3579631-3579650 | MsG0780036147.01.T01:CDS | 25.0% |
| !!! | GATCTTTTGAAGTTTAGAAA+TGG | + | Chr7:3579046-3579065 | MsG0780036147.01.T01:CDS | 25.0% |
| !!! | TTGTTGTTTTGAAGCTTTTA+AGG | + | Chr7:3579576-3579595 | MsG0780036147.01.T01:CDS | 25.0% |
| AAACGCGGTTATTTACTTTA+TGG | + | Chr7:3579103-3579122 | MsG0780036147.01.T01:CDS | 30.0% | |
| AGAATTCATGGAAAGTGATT+TGG | - | Chr7:3578538-3578557 | None:intergenic | 30.0% | |
| CTATTATGCAAAAATCGGTA+AGG | + | Chr7:3579075-3579094 | MsG0780036147.01.T01:CDS | 30.0% | |
| TATGGCATACATGAACATTA+TGG | - | Chr7:3578432-3578451 | None:intergenic | 30.0% | |
| TTATGATCTTGAATTAACCG+CGG | + | Chr7:3579189-3579208 | MsG0780036147.01.T01:CDS | 30.0% | |
| TTGCAATGAGAAATAGACAA+AGG | + | Chr7:3578888-3578907 | MsG0780036147.01.T01:CDS | 30.0% | |
| TTTCATTGTGACAGTGAAAA+AGG | + | Chr7:3579849-3579868 | MsG0780036147.01.T01:CDS | 30.0% | |
| ! | AATTTCAAGGTGTTAAGCTT+TGG | + | Chr7:3578717-3578736 | MsG0780036147.01.T01:CDS | 30.0% |
| ! | AATTTTCACGACGAATTTTG+TGG | + | Chr7:3579492-3579511 | MsG0780036147.01.T01:CDS | 30.0% |
| ! | TGATGAAATTGGTGATTTGT+TGG | + | Chr7:3579642-3579661 | MsG0780036147.01.T01:CDS | 30.0% |
| !!! | ATCAAGCATGTTTTGAAAGA+AGG | + | Chr7:3578857-3578876 | MsG0780036147.01.T01:CDS | 30.0% |
| !!! | TCAAGCATGTTTTGAAAGAA+GGG | + | Chr7:3578858-3578877 | MsG0780036147.01.T01:CDS | 30.0% |
| AACTTGATCCTGCTCTTATT+AGG | + | Chr7:3579518-3579537 | MsG0780036147.01.T01:CDS | 35.0% | |
| ACAAGAAGTAGAAGAAGACA+AGG | + | Chr7:3579786-3579805 | MsG0780036147.01.T01:CDS | 35.0% | |
| ACATCTTCATTCACAGACTT+AGG | - | Chr7:3579712-3579731 | None:intergenic | 35.0% | |
| AGACTATCACGAAATGAAGA+TGG | - | Chr7:3578470-3578489 | None:intergenic | 35.0% | |
| ATAGTAGATTTACCTGTTCC+TGG | - | Chr7:3579133-3579152 | None:intergenic | 35.0% | |
| ATCACTTTCCATGAATTCTC+AGG | + | Chr7:3578539-3578558 | MsG0780036147.01.T01:CDS | 35.0% | |
| ATTTGATTCAAGCACTTGAG+AGG | + | Chr7:3579749-3579768 | MsG0780036147.01.T01:CDS | 35.0% | |
| CAAATAATCCAAGTAGTGGT+TGG | + | Chr7:3578921-3578940 | MsG0780036147.01.T01:CDS | 35.0% | |
| GAAGTCACAGATGAATTTCA+AGG | + | Chr7:3578704-3578723 | MsG0780036147.01.T01:CDS | 35.0% | |
| TATTTACTTTATGGTCCTCC+AGG | + | Chr7:3579112-3579131 | MsG0780036147.01.T01:CDS | 35.0% | |
| TCATCAATGCTAAGAACCAA+TGG | - | Chr7:3578677-3578696 | None:intergenic | 35.0% | |
| ! | AGATGAGTTTTCACTTAGGT+AGG | - | Chr7:3578606-3578625 | None:intergenic | 35.0% |
| ! | GGAAAGTGATTTGGATGTAA+GGG | - | Chr7:3578529-3578548 | None:intergenic | 35.0% |
| ! | GTTGAGATGAGTTTTCACTT+AGG | - | Chr7:3578610-3578629 | None:intergenic | 35.0% |
| ! | TGGAAAGTGATTTGGATGTA+AGG | - | Chr7:3578530-3578549 | None:intergenic | 35.0% |
| AAATTCTCAGCAACATCAGC+AGG | - | Chr7:3579685-3579704 | None:intergenic | 40.0% | |
| ATCTACTATGATAGCCGCTA+TGG | + | Chr7:3579144-3579163 | MsG0780036147.01.T01:CDS | 40.0% | |
| ATGCAAAAATCGGTAAGGCT+TGG | + | Chr7:3579080-3579099 | MsG0780036147.01.T01:CDS | 40.0% | |
| GAACATTATGGTGGCTAGTA+TGG | - | Chr7:3578420-3578439 | None:intergenic | 40.0% | |
| GAAGACAAGGAAGATAGTGT+AGG | + | Chr7:3579799-3579818 | MsG0780036147.01.T01:CDS | 40.0% | |
| GGCATACATGAACATTATGG+TGG | - | Chr7:3578429-3578448 | None:intergenic | 40.0% | |
| GTCTTTCACCTGAGAATTCA+TGG | - | Chr7:3578550-3578569 | None:intergenic | 40.0% | |
| GTGGAAGATGTGAAGGAAAA+TGG | + | Chr7:3579826-3579845 | MsG0780036147.01.T01:CDS | 40.0% | |
| GTTCATGAAATTCGCCATAG+CGG | - | Chr7:3579161-3579180 | None:intergenic | 40.0% | |
| TAACCATACCAACCACTACT+TGG | - | Chr7:3578932-3578951 | None:intergenic | 40.0% | |
| TCTTATTAGGACAGGAAGGA+TGG | + | Chr7:3579531-3579550 | MsG0780036147.01.T01:CDS | 40.0% | |
| TCTTGAATTAACCGCGGTTA+AGG | + | Chr7:3579195-3579214 | MsG0780036147.01.T01:CDS | 40.0% | |
| TGAGGAAGAAGACTCATTCA+TGG | + | Chr7:3579339-3579358 | MsG0780036147.01.T01:CDS | 40.0% | |
| ! | AATCCAAGTAGTGGTTGGTA+TGG | + | Chr7:3578926-3578945 | MsG0780036147.01.T01:CDS | 40.0% |
| ! | CACTTGATTTTACTAGCCAG+AGG | + | Chr7:3579293-3579312 | MsG0780036147.01.T01:CDS | 40.0% |
| ! | TCAAGGTGTTAAGCTTTGGT+GGG | + | Chr7:3578721-3578740 | MsG0780036147.01.T01:CDS | 40.0% |
| ! | TTCAAGGTGTTAAGCTTTGG+TGG | + | Chr7:3578720-3578739 | MsG0780036147.01.T01:CDS | 40.0% |
| !!! | GACTTCAGCTTTGAGTCTTT+TGG | - | Chr7:3578636-3578655 | None:intergenic | 40.0% |
| !!! | GACTTTTGAGACACTTGCAT+TGG | + | Chr7:3578994-3579013 | MsG0780036147.01.T01:CDS | 40.0% |
| AGGAACTGTGGAAGATGTGA+AGG | + | Chr7:3579819-3579838 | MsG0780036147.01.T01:CDS | 45.0% | |
| AGTGAACTATGGGCACAACT+AGG | + | Chr7:3578392-3578411 | MsG0780036147.01.T01:CDS | 45.0% | |
| CTCGGTATTATCCTTAACCG+CGG | - | Chr7:3579209-3579228 | None:intergenic | 45.0% | |
| CTGCTCTTATTAGGACAGGA+AGG | + | Chr7:3579527-3579546 | MsG0780036147.01.T01:CDS | 45.0% | |
| CTTCCTGTCCTAATAAGAGC+AGG | - | Chr7:3579529-3579548 | None:intergenic | 45.0% | |
| GATCCTGCTCTTATTAGGAC+AGG | + | Chr7:3579523-3579542 | MsG0780036147.01.T01:CDS | 45.0% | |
| GGAAGATAGTGTAGGAACTG+TGG | + | Chr7:3579807-3579826 | MsG0780036147.01.T01:CDS | 45.0% | |
| GTAGATTTACCTGTTCCTGG+AGG | - | Chr7:3579130-3579149 | None:intergenic | 45.0% | |
| TCAAGCACTTGAGAGGAAGA+AGG | + | Chr7:3579756-3579775 | MsG0780036147.01.T01:CDS | 45.0% | |
| AGCACTTGAGAGGAAGAAGG+TGG | + | Chr7:3579759-3579778 | MsG0780036147.01.T01:CDS | 50.0% | |
| ATCGGTAAGGCTTGGAAACG+CGG | + | Chr7:3579088-3579107 | MsG0780036147.01.T01:CDS | 50.0% | |
| CTTTATGGTCCTCCAGGAAC+AGG | + | Chr7:3579118-3579137 | MsG0780036147.01.T01:CDS | 50.0% | |
| GCAAGTGTCTCAAAAGTCGC+AGG | - | Chr7:3578992-3579011 | None:intergenic | 50.0% | |
| AATCCTCTCTCCTCCACACG+CGG | - | Chr7:3579470-3579489 | None:intergenic | 55.0% | |
| GATGGAATTTGGTCCGCGTG+TGG | + | Chr7:3579454-3579473 | MsG0780036147.01.T01:CDS | 55.0% | |
| GGAATTTGGTCCGCGTGTGG+AGG | + | Chr7:3579457-3579476 | MsG0780036147.01.T01:CDS | 60.0% | |
| GGTCCGCGTGTGGAGGAGAG+AGG | + | Chr7:3579464-3579483 | MsG0780036147.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 3578389 | 3579885 | 3578389 | ID=MsG0780036147.01;Name=MsG0780036147.01 |
| Chr7 | mRNA | 3578389 | 3579885 | 3578389 | ID=MsG0780036147.01.T01;Parent=MsG0780036147.01;Name=MsG0780036147.01.T01;_AED=0.10;_eAED=0.10;_QI=0|-1|0|1|-1|1|1|0|498 |
| Chr7 | exon | 3578389 | 3579885 | 3578389 | ID=MsG0780036147.01.T01:exon:2058;Parent=MsG0780036147.01.T01 |
| Chr7 | CDS | 3578389 | 3579885 | 3578389 | ID=MsG0780036147.01.T01:cds;Parent=MsG0780036147.01.T01 |
| Gene Sequence |
| Protein sequence |
