Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041118.01.T01 | XP_003625810.1 | 96.992 | 399 | 10 | 2 | 1 | 398 | 8 | 405 | 0 | 789 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041118.01.T01 | Q9SJN0 | 48.165 | 436 | 140 | 11 | 7 | 393 | 13 | 411 | 9.80E-105 | 320 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048633.01 | MsG0780041118.01 | 0.824055 | 9.927928e-54 | 8.698028e-51 |
| MsG0080048652.01 | MsG0780041118.01 | 0.809922 | 1.489052e-50 | 8.855518e-48 |
| MsG0180002808.01 | MsG0780041118.01 | 0.817841 | 2.674903e-52 | 1.969698e-49 |
| MsG0180004124.01 | MsG0780041118.01 | -0.828327 | 9.563626e-55 | 9.474605e-52 |
| MsG0180004125.01 | MsG0780041118.01 | -0.829534 | 4.878345e-55 | 5.006738e-52 |
| MsG0180004467.01 | MsG0780041118.01 | 0.801721 | 7.877060e-49 | 3.788710e-46 |
| MsG0180004559.01 | MsG0780041118.01 | 0.807359 | 5.252409e-50 | 2.919476e-47 |
| MsG0180005369.01 | MsG0780041118.01 | -0.812402 | 4.317443e-51 | 2.742620e-48 |
| MsG0180005757.01 | MsG0780041118.01 | 0.813705 | 2.236096e-51 | 1.470898e-48 |
| MsG0180006191.01 | MsG0780041118.01 | 0.806565 | 7.733885e-50 | 4.211358e-47 |
| MsG0280006316.01 | MsG0780041118.01 | 0.813783 | 2.148577e-51 | 1.416289e-48 |
| MsG0780041100.01 | MsG0780041118.01 | 0.807988 | 3.863068e-50 | 2.182750e-47 |
| MsG0780041118.01 | MsG0780041180.01 | 0.804867 | 1.757749e-49 | 9.164759e-47 |
| MsG0780041118.01 | MsG0780041403.01 | 0.802284 | 6.034051e-49 | 2.944365e-46 |
| MsG0780041118.01 | MsG0880042122.01 | 0.806069 | 9.836907e-50 | 5.289259e-47 |
| MsG0780041118.01 | MsG0880043550.01 | 0.808957 | 2.399425e-50 | 1.390724e-47 |
| MsG0780041118.01 | MsG0880043983.01 | 0.825719 | 4.020724e-54 | 3.694387e-51 |
| MsG0780041118.01 | MsG0880044688.01 | 0.833798 | 4.335256e-56 | 5.047095e-53 |
| MsG0780041118.01 | MsG0880045856.01 | 0.817481 | 3.224308e-52 | 2.350977e-49 |
| MsG0780041118.01 | MsG0880046174.01 | -0.802122 | 6.517984e-49 | 3.167136e-46 |
| MsG0780041118.01 | MsG0880046945.01 | 0.800149 | 1.650554e-48 | 7.629086e-46 |
| MsG0780041118.01 | MsG0880047450.01 | 0.833855 | 4.194937e-56 | 4.892311e-53 |
| MsG0280010617.01 | MsG0780041118.01 | 0.827236 | 1.748617e-54 | 1.678249e-51 |
| MsG0380012818.01 | MsG0780041118.01 | 0.809179 | 2.150494e-50 | 1.253940e-47 |
| MsG0380013041.01 | MsG0780041118.01 | 0.823504 | 1.336893e-53 | 1.153290e-50 |
| MsG0680031204.01 | MsG0780041118.01 | -0.807261 | 5.510845e-50 | 3.055412e-47 |
| MsG0480019028.01 | MsG0780041118.01 | -0.801252 | 9.828713e-49 | 4.671935e-46 |
| MsG0480023195.01 | MsG0780041118.01 | 0.805219 | 1.483849e-49 | 7.806166e-47 |
| MsG0480023322.01 | MsG0780041118.01 | 0.805756 | 1.144892e-49 | 6.107145e-47 |
| MsG0480023858.01 | MsG0780041118.01 | 0.811286 | 7.554118e-51 | 4.657169e-48 |
| MsG0580024442.01 | MsG0780041118.01 | -0.801741 | 7.803480e-49 | 3.755158e-46 |
| MsG0580025023.01 | MsG0780041118.01 | 0.807598 | 4.673388e-50 | 2.613736e-47 |
| MsG0380015828.01 | MsG0780041118.01 | -0.820571 | 6.392955e-53 | 5.076907e-50 |
| MsG0380016031.01 | MsG0780041118.01 | 0.802788 | 4.751732e-49 | 2.348557e-46 |
| MsG0380016819.01 | MsG0780041118.01 | 0.802559 | 5.298141e-49 | 2.603161e-46 |
| MsG0380017380.01 | MsG0780041118.01 | 0.810356 | 1.200518e-50 | 7.220857e-48 |
| MsG0580026282.01 | MsG0780041118.01 | 0.801620 | 8.263558e-49 | 3.964379e-46 |
| MsG0580027276.01 | MsG0780041118.01 | -0.810339 | 1.211061e-50 | 7.280708e-48 |
| MsG0580028565.01 | MsG0780041118.01 | 0.860765 | 1.643885e-63 | 4.544231e-60 |
| MsG0580030179.01 | MsG0780041118.01 | 0.812919 | 3.326504e-51 | 2.141965e-48 |
| MsG0280007653.01 | MsG0780041118.01 | -0.830260 | 3.246396e-55 | 3.402859e-52 |
| MsG0780037982.01 | MsG0780041118.01 | -0.814627 | 1.399031e-51 | 9.435647e-49 |
| MsG0780038393.01 | MsG0780041118.01 | 0.814659 | 1.376719e-51 | 9.292649e-49 |
| MsG0780038810.01 | MsG0780041118.01 | 0.816283 | 5.988643e-52 | 4.225786e-49 |
| MsG0780039916.01 | MsG0780041118.01 | 0.830599 | 2.681856e-55 | 2.838906e-52 |
| MsG0780040118.01 | MsG0780041118.01 | 0.814664 | 1.373075e-51 | 9.269358e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041118.01.T01 | MTR_7g104480 | 96.992 | 399 | 10 | 2 | 1 | 398 | 8 | 405 | 0.0 | 789 |
| MsG0780041118.01.T01 | MTR_2g086340 | 39.554 | 359 | 130 | 11 | 36 | 394 | 26 | 297 | 9.25e-59 | 195 |
| MsG0780041118.01.T01 | MTR_4g085910 | 34.699 | 415 | 152 | 17 | 36 | 403 | 22 | 364 | 6.37e-46 | 163 |
| MsG0780041118.01.T01 | MTR_8g043960 | 35.112 | 356 | 134 | 11 | 30 | 381 | 23 | 285 | 9.20e-46 | 161 |
| MsG0780041118.01.T01 | MTR_3g010660 | 35.854 | 357 | 152 | 11 | 31 | 387 | 20 | 299 | 2.38e-44 | 157 |
| MsG0780041118.01.T01 | MTR_2g086390 | 48.551 | 138 | 59 | 5 | 37 | 174 | 13 | 138 | 8.17e-32 | 123 |
| MsG0780041118.01.T01 | MTR_2g086390 | 55.556 | 108 | 38 | 2 | 291 | 394 | 165 | 266 | 3.90e-29 | 115 |
| MsG0780041118.01.T01 | MTR_2g086390 | 48.551 | 138 | 59 | 5 | 37 | 174 | 13 | 138 | 2.60e-31 | 121 |
| MsG0780041118.01.T01 | MTR_2g086390 | 55.102 | 98 | 34 | 2 | 291 | 384 | 165 | 256 | 2.22e-24 | 102 |
| MsG0780041118.01.T01 | MTR_3g101780 | 48.148 | 135 | 48 | 4 | 37 | 171 | 32 | 144 | 4.37e-28 | 115 |
| MsG0780041118.01.T01 | MTR_3g101780 | 44.444 | 153 | 68 | 4 | 273 | 419 | 283 | 424 | 1.46e-21 | 96.7 |
| MsG0780041118.01.T01 | MTR_6g026800 | 38.255 | 149 | 69 | 3 | 34 | 175 | 18 | 150 | 3.31e-21 | 94.4 |
| MsG0780041118.01.T01 | MTR_7g088090 | 35.766 | 137 | 66 | 4 | 37 | 171 | 21 | 137 | 1.79e-17 | 83.2 |
| MsG0780041118.01.T01 | MTR_7g088090 | 67.164 | 67 | 20 | 2 | 323 | 388 | 233 | 298 | 2.40e-17 | 83.2 |
| MsG0780041118.01.T01 | MTR_4g094390 | 37.398 | 123 | 65 | 2 | 279 | 395 | 71 | 187 | 1.12e-15 | 75.5 |
| MsG0780041118.01.T01 | MTR_5g088230 | 36.090 | 133 | 67 | 2 | 37 | 169 | 27 | 141 | 2.06e-12 | 67.8 |
| MsG0780041118.01.T01 | MTR_5g088230 | 58.621 | 58 | 24 | 0 | 324 | 381 | 184 | 241 | 5.25e-11 | 63.5 |
| MsG0780041118.01.T01 | MTR_5g088230 | 36.090 | 133 | 67 | 2 | 37 | 169 | 22 | 136 | 2.07e-12 | 67.4 |
| MsG0780041118.01.T01 | MTR_5g088230 | 58.621 | 58 | 24 | 0 | 324 | 381 | 179 | 236 | 5.37e-11 | 63.2 |
| MsG0780041118.01.T01 | MTR_1g098590 | 56.452 | 62 | 27 | 0 | 333 | 394 | 157 | 218 | 2.12e-12 | 67.0 |
| MsG0780041118.01.T01 | MTR_1g098590 | 52.239 | 67 | 32 | 0 | 333 | 399 | 157 | 223 | 3.55e-12 | 66.6 |
| MsG0780041118.01.T01 | MTR_1g098590 | 54.839 | 62 | 28 | 0 | 333 | 394 | 157 | 218 | 5.63e-12 | 65.5 |
| MsG0780041118.01.T01 | MTR_7g015990 | 47.561 | 82 | 31 | 2 | 303 | 381 | 94 | 166 | 6.21e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041118.01.T01 | AT2G36270 | 47.846 | 441 | 144 | 11 | 7 | 398 | 13 | 416 | 7.20e-107 | 323 |
| MsG0780041118.01.T01 | AT2G36270 | 48.165 | 436 | 140 | 11 | 7 | 393 | 13 | 411 | 1.00e-105 | 320 |
| MsG0780041118.01.T01 | AT2G36270 | 48.165 | 436 | 140 | 11 | 7 | 393 | 13 | 411 | 1.00e-105 | 320 |
| MsG0780041118.01.T01 | AT1G45249 | 37.055 | 421 | 185 | 17 | 31 | 405 | 21 | 407 | 6.05e-50 | 175 |
| MsG0780041118.01.T01 | AT1G45249 | 37.055 | 421 | 185 | 17 | 31 | 405 | 36 | 422 | 7.17e-50 | 175 |
| MsG0780041118.01.T01 | AT1G45249 | 37.055 | 421 | 185 | 17 | 31 | 405 | 36 | 422 | 7.17e-50 | 175 |
| MsG0780041118.01.T01 | AT1G45249 | 36.277 | 419 | 179 | 16 | 31 | 395 | 21 | 405 | 1.45e-46 | 166 |
| MsG0780041118.01.T01 | AT1G49720 | 31.538 | 390 | 223 | 9 | 22 | 394 | 6 | 368 | 1.30e-34 | 133 |
| MsG0780041118.01.T01 | AT1G49720 | 31.538 | 390 | 223 | 9 | 22 | 394 | 6 | 368 | 1.30e-34 | 133 |
| MsG0780041118.01.T01 | AT3G44460 | 51.408 | 142 | 53 | 4 | 31 | 171 | 35 | 161 | 1.06e-31 | 124 |
| MsG0780041118.01.T01 | AT3G44460 | 51.961 | 102 | 49 | 0 | 314 | 415 | 224 | 325 | 3.09e-18 | 85.9 |
| MsG0780041118.01.T01 | AT3G56850 | 47.368 | 152 | 60 | 5 | 20 | 171 | 5 | 136 | 4.69e-28 | 113 |
| MsG0780041118.01.T01 | AT3G56850 | 67.797 | 59 | 18 | 1 | 324 | 381 | 211 | 269 | 1.41e-15 | 77.4 |
| MsG0780041118.01.T01 | AT1G49720 | 41.212 | 165 | 71 | 5 | 22 | 174 | 6 | 156 | 5.06e-27 | 112 |
| MsG0780041118.01.T01 | AT1G49720 | 57.746 | 71 | 30 | 0 | 324 | 394 | 298 | 368 | 1.62e-16 | 81.6 |
| MsG0780041118.01.T01 | AT5G42910 | 28.101 | 395 | 206 | 13 | 19 | 390 | 7 | 346 | 5.03e-26 | 108 |
| MsG0780041118.01.T01 | AT3G19290 | 44.138 | 145 | 72 | 4 | 31 | 171 | 34 | 173 | 3.03e-25 | 107 |
| MsG0780041118.01.T01 | AT3G19290 | 46.903 | 113 | 47 | 3 | 282 | 394 | 309 | 408 | 6.63e-18 | 85.9 |
| MsG0780041118.01.T01 | AT3G19290 | 44.138 | 145 | 72 | 4 | 31 | 171 | 34 | 173 | 4.71e-25 | 107 |
| MsG0780041118.01.T01 | AT3G19290 | 42.029 | 138 | 58 | 4 | 282 | 419 | 309 | 424 | 8.17e-18 | 85.5 |
| MsG0780041118.01.T01 | AT3G19290 | 44.138 | 145 | 72 | 4 | 31 | 171 | 34 | 173 | 4.71e-25 | 107 |
| MsG0780041118.01.T01 | AT3G19290 | 42.029 | 138 | 58 | 4 | 282 | 419 | 309 | 424 | 8.17e-18 | 85.5 |
| MsG0780041118.01.T01 | AT3G19290 | 44.138 | 145 | 72 | 4 | 31 | 171 | 34 | 173 | 4.71e-25 | 107 |
| MsG0780041118.01.T01 | AT3G19290 | 43.165 | 139 | 56 | 5 | 282 | 419 | 309 | 425 | 7.50e-18 | 85.9 |
| MsG0780041118.01.T01 | AT3G19290 | 44.138 | 145 | 72 | 4 | 31 | 171 | 34 | 173 | 5.80e-25 | 106 |
| MsG0780041118.01.T01 | AT4G34000 | 40.606 | 165 | 72 | 5 | 31 | 172 | 27 | 188 | 1.58e-24 | 105 |
| MsG0780041118.01.T01 | AT4G34000 | 51.765 | 85 | 34 | 1 | 322 | 399 | 357 | 441 | 6.82e-17 | 82.8 |
| MsG0780041118.01.T01 | AT4G34000 | 40.476 | 168 | 74 | 5 | 28 | 172 | 24 | 188 | 1.67e-24 | 105 |
| MsG0780041118.01.T01 | AT4G34000 | 56.164 | 73 | 32 | 0 | 322 | 394 | 357 | 429 | 5.02e-18 | 86.3 |
| MsG0780041118.01.T01 | AT4G34000 | 40.476 | 168 | 74 | 5 | 28 | 172 | 24 | 188 | 1.67e-24 | 105 |
| MsG0780041118.01.T01 | AT4G34000 | 56.164 | 73 | 32 | 0 | 322 | 394 | 357 | 429 | 5.02e-18 | 86.3 |
| MsG0780041118.01.T01 | AT4G34000 | 40.476 | 168 | 74 | 5 | 28 | 172 | 24 | 188 | 1.67e-24 | 105 |
| MsG0780041118.01.T01 | AT4G34000 | 56.164 | 73 | 32 | 0 | 322 | 394 | 357 | 429 | 5.02e-18 | 86.3 |
| MsG0780041118.01.T01 | AT2G41070 | 34.872 | 195 | 77 | 7 | 18 | 203 | 3 | 156 | 7.97e-21 | 91.7 |
| MsG0780041118.01.T01 | AT2G41070 | 67.241 | 58 | 19 | 0 | 324 | 381 | 177 | 234 | 7.20e-16 | 77.4 |
| MsG0780041118.01.T01 | AT2G41070 | 34.872 | 195 | 77 | 7 | 18 | 203 | 3 | 156 | 1.78e-20 | 90.9 |
| MsG0780041118.01.T01 | AT2G41070 | 64.615 | 65 | 22 | 1 | 324 | 388 | 177 | 240 | 3.15e-16 | 79.0 |
| MsG0780041118.01.T01 | AT2G41070 | 34.872 | 195 | 77 | 7 | 18 | 203 | 3 | 156 | 1.78e-20 | 90.9 |
| MsG0780041118.01.T01 | AT2G41070 | 64.615 | 65 | 22 | 1 | 324 | 388 | 177 | 240 | 3.15e-16 | 79.0 |
| MsG0780041118.01.T01 | AT2G41070 | 34.872 | 195 | 77 | 7 | 18 | 203 | 3 | 156 | 1.78e-20 | 90.9 |
| MsG0780041118.01.T01 | AT2G41070 | 64.615 | 65 | 22 | 1 | 324 | 388 | 177 | 240 | 3.15e-16 | 79.0 |
| MsG0780041118.01.T01 | AT2G41070 | 34.872 | 195 | 77 | 7 | 18 | 203 | 12 | 165 | 2.34e-20 | 90.9 |
| MsG0780041118.01.T01 | AT2G41070 | 64.615 | 65 | 22 | 1 | 324 | 388 | 186 | 249 | 3.12e-16 | 79.0 |
| MsG0780041118.01.T01 | AT1G45249 | 52.222 | 90 | 31 | 4 | 283 | 364 | 278 | 363 | 1.44e-14 | 75.5 |
| MsG0780041118.01.T01 | AT1G45249 | 52.222 | 90 | 31 | 4 | 283 | 364 | 278 | 363 | 1.44e-14 | 75.5 |
| MsG0780041118.01.T01 | AT2G17770 | 41.026 | 117 | 51 | 3 | 264 | 380 | 69 | 167 | 5.22e-14 | 70.9 |
| MsG0780041118.01.T01 | AT1G45249 | 47.573 | 103 | 36 | 5 | 283 | 371 | 278 | 376 | 9.27e-14 | 73.2 |
| MsG0780041118.01.T01 | AT1G45249 | 47.573 | 103 | 36 | 5 | 283 | 371 | 278 | 376 | 9.27e-14 | 73.2 |
| MsG0780041118.01.T01 | AT1G45249 | 47.573 | 103 | 36 | 5 | 283 | 371 | 278 | 376 | 9.27e-14 | 73.2 |
| MsG0780041118.01.T01 | AT1G45249 | 47.573 | 103 | 36 | 5 | 283 | 371 | 278 | 376 | 9.27e-14 | 73.2 |
| MsG0780041118.01.T01 | AT5G44080 | 48.276 | 87 | 42 | 2 | 316 | 399 | 207 | 293 | 1.41e-13 | 71.6 |
| MsG0780041118.01.T01 | AT4G35900 | 33.951 | 162 | 89 | 6 | 233 | 387 | 114 | 264 | 9.10e-12 | 65.9 |
| MsG0780041118.01.T01 | AT1G03970 | 50.000 | 74 | 35 | 1 | 321 | 394 | 173 | 244 | 1.80e-11 | 64.7 |
Find 151 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACTCGGGTGGTCAATT+TGG | 0.166727 | 7:+86838565 | MsG0780041118.01.T01:CDS |
| ATGAGTTTCTAAGTAGTATT+TGG | 0.209852 | 7:+86837828 | MsG0780041118.01.T01:CDS |
| CAGGAATCGATAACGAATTT+TGG | 0.216092 | 7:-86837958 | None:intergenic |
| GTTGGAGAGCCTTCGGGTTC+GGG | 0.231478 | 7:+86838361 | MsG0780041118.01.T01:CDS |
| CAGGCTGCTTCATTTGCTAT+TGG | 0.248337 | 7:+86838271 | MsG0780041118.01.T01:CDS |
| GTGACAGCGGCAAGAATTTC+GGG | 0.248709 | 7:+86837792 | MsG0780041118.01.T01:CDS |
| AGTTGGAGAGCCTTCGGGTT+CGG | 0.262820 | 7:+86838360 | MsG0780041118.01.T01:CDS |
| GATGACATTGGAGGATTTCT+TGG | 0.268533 | 7:+86838108 | MsG0780041118.01.T01:CDS |
| TGTGACAGCGGCAAGAATTT+CGG | 0.276728 | 7:+86837791 | MsG0780041118.01.T01:CDS |
| TGGTTAAAGCAGGGGTAGTT+AGG | 0.281516 | 7:+86838128 | MsG0780041118.01.T01:CDS |
| GCCATTGTAGAGTTGTTATT+AGG | 0.296465 | 7:-86838247 | None:intergenic |
| CCGCCGCCAGCGGTTTGTTA+TGG | 0.308148 | 7:+86838436 | MsG0780041118.01.T01:CDS |
| GTTGTTGCTGTTATTATTGT+TGG | 0.310662 | 7:-86837882 | None:intergenic |
| TGTGGCAGTGGCACAAACTA+TGG | 0.315000 | 7:+86838495 | MsG0780041118.01.T01:CDS |
| ACCCCTCGACAACCGACTTT+TGG | 0.322363 | 7:+86838082 | MsG0780041118.01.T01:CDS |
| ACCTGTTAGTCCGGTTTCTT+CGG | 0.327709 | 7:+86838528 | MsG0780041118.01.T01:CDS |
| AATGGAGGAGCGGGCGGTTA+TGG | 0.333736 | 7:+86838472 | MsG0780041118.01.T01:CDS |
| AAAACTCGGGTGGTCAATTT+GGG | 0.341515 | 7:+86838566 | MsG0780041118.01.T01:CDS |
| ACACTGCGGCGTAATGCTGC+TGG | 0.344613 | 7:-86838222 | None:intergenic |
| TTACCTCATGCAGTGTTTAG+AGG | 0.347444 | 7:+86839296 | MsG0780041118.01.T01:intron |
| GGAAAACTGTTGAACAAGTT+TGG | 0.348644 | 7:+86837993 | MsG0780041118.01.T01:CDS |
| TTTGCTATTGGCGGCGGCGG+TGG | 0.358934 | 7:+86838283 | MsG0780041118.01.T01:CDS |
| CTCTCCACCACCCTTTCAAC+AGG | 0.360473 | 7:-86838634 | None:intergenic |
| CACTGCGGCGTAATGCTGCT+GGG | 0.364765 | 7:-86838221 | None:intergenic |
| TGGAGGAGTTGGAGAGCCTT+CGG | 0.365531 | 7:+86838354 | MsG0780041118.01.T01:CDS |
| TCCGAAGAAACCGGACTAAC+AGG | 0.372237 | 7:-86838529 | None:intergenic |
| ATTATAGTTTAGACCATCAT+TGG | 0.373341 | 7:-86839188 | None:intergenic |
| GTCGAGGGTGAGTGAATATA+TGG | 0.374227 | 7:-86837750 | None:intergenic |
| GGTGGTGGTGCTATGGCAAC+TGG | 0.375213 | 7:-86838169 | None:intergenic |
| CTTCGGGTTCGGGGTATGTT+GGG | 0.383128 | 7:+86838371 | MsG0780041118.01.T01:CDS |
| CAAACCGCTGGCGGCGGCGG+AGG | 0.394088 | 7:-86838430 | None:intergenic |
| ACTGCTGCTGCGGCAGGTGG+TGG | 0.397437 | 7:-86838184 | None:intergenic |
| TAGAAACTCATCCATGTTCA+TGG | 0.401819 | 7:-86837816 | None:intergenic |
| AGAGAATTCTCAACTGAAAC+AGG | 0.410221 | 7:+86839029 | MsG0780041118.01.T01:CDS |
| TAAGAGAAGGTGAGATGAAT+TGG | 0.412357 | 7:+86837627 | None:intergenic |
| TTGCTATTGGCGGCGGCGGT+GGG | 0.413081 | 7:+86838284 | MsG0780041118.01.T01:CDS |
| CCGGTTTCTTCGGATGGGAT+TGG | 0.415620 | 7:+86838538 | MsG0780041118.01.T01:CDS |
| GGAGGAGTTGGAGAGCCTTC+GGG | 0.416356 | 7:+86838355 | MsG0780041118.01.T01:CDS |
| CCTTCGGGTTCGGGGTATGT+TGG | 0.416821 | 7:+86838370 | MsG0780041118.01.T01:CDS |
| CACCTCCCTGTGCCACCGTT+TGG | 0.419295 | 7:-86838333 | None:intergenic |
| AAGATCTAGAGCCAGAAAAC+AGG | 0.420885 | 7:+86838696 | MsG0780041118.01.T01:CDS |
| TGTTGGATGCAGCTTGTTGT+TGG | 0.421539 | 7:-86837865 | None:intergenic |
| CGGCGTAATGCTGCTGGGGC+CGG | 0.426351 | 7:-86838216 | None:intergenic |
| GCACAGGGAGGTGGAGGAGT+TGG | 0.427569 | 7:+86838343 | MsG0780041118.01.T01:CDS |
| GTTAGTCCGGTTTCTTCGGA+TGG | 0.429323 | 7:+86838532 | MsG0780041118.01.T01:CDS |
| CCCTGTGCCACCGTTTGGTA+TGG | 0.438711 | 7:-86838328 | None:intergenic |
| GATGGGCGGACCTGTTAGTC+CGG | 0.445248 | 7:+86838519 | MsG0780041118.01.T01:CDS |
| TCAGAAAGGGATTAGCAAAC+AGG | 0.447868 | 7:+86837922 | MsG0780041118.01.T01:CDS |
| ATTGATATGAATGGTTTAAG+AGG | 0.448244 | 7:+86838589 | MsG0780041118.01.T01:CDS |
| AATGTCATTTCTTCTTCGCT+TGG | 0.451297 | 7:+86837713 | MsG0780041118.01.T01:CDS |
| GGAAGAAAGAGGATGGTTGA+TGG | 0.453215 | 7:+86838610 | MsG0780041118.01.T01:CDS |
| GAGGATTTCTTGGTTAAAGC+AGG | 0.456229 | 7:+86838118 | MsG0780041118.01.T01:CDS |
| GATGACACTGCTGCTGCGGC+AGG | 0.456822 | 7:-86838190 | None:intergenic |
| TGGTGGAGAGAAGGCAGAGG+AGG | 0.457363 | 7:+86838647 | MsG0780041118.01.T01:CDS |
| GACTAGGGATAGTATAGGTA+CGG | 0.462211 | 7:+86838402 | MsG0780041118.01.T01:CDS |
| TCATTTGCTATTGGCGGCGG+CGG | 0.466577 | 7:+86838280 | MsG0780041118.01.T01:CDS |
| GCCATACCAAACGGTGGCAC+AGG | 0.467096 | 7:+86838327 | MsG0780041118.01.T01:CDS |
| ACGGTGGCACAGGGAGGTGG+AGG | 0.470179 | 7:+86838337 | MsG0780041118.01.T01:CDS |
| GGGAAGGAGAAGAAGCGATC+AGG | 0.473369 | 7:+86837678 | MsG0780041118.01.T01:CDS |
| TAACAAACCGCTGGCGGCGG+CGG | 0.477710 | 7:-86838433 | None:intergenic |
| CCGCCAGCGGTTTGTTATGG+AGG | 0.477954 | 7:+86838439 | MsG0780041118.01.T01:CDS |
| CAAACGGTGGCACAGGGAGG+TGG | 0.478151 | 7:+86838334 | MsG0780041118.01.T01:CDS |
| CGATTCCTGCACCTCTCTGC+AGG | 0.479043 | 7:+86837972 | MsG0780041118.01.T01:CDS |
| GGTTGATGGTCCTGTTGAAA+GGG | 0.481262 | 7:+86838624 | MsG0780041118.01.T01:CDS |
| CCAATCCCATCCGAAGAAAC+CGG | 0.481309 | 7:-86838538 | None:intergenic |
| GGTTAAAGCAGGGGTAGTTA+GGG | 0.481908 | 7:+86838129 | MsG0780041118.01.T01:CDS |
| AGAGAGGAGAAGAAGACAAC+AGG | 0.484243 | 7:+86839162 | MsG0780041118.01.T01:CDS |
| TTAGTCCGGTTTCTTCGGAT+GGG | 0.486374 | 7:+86838533 | MsG0780041118.01.T01:CDS |
| GACACTGCTGCTGCGGCAGG+TGG | 0.491945 | 7:-86838187 | None:intergenic |
| GCTGCTTCATTTGCTATTGG+CGG | 0.495000 | 7:+86838274 | MsG0780041118.01.T01:CDS |
| AGTGGCACAAACTATGGGGA+TGG | 0.502987 | 7:+86838501 | MsG0780041118.01.T01:CDS |
| GGGCGGTTATGGTGTGGCAG+TGG | 0.504333 | 7:+86838483 | MsG0780041118.01.T01:CDS |
| CAATTTGGGATTGATATGAA+TGG | 0.505237 | 7:+86838580 | MsG0780041118.01.T01:CDS |
| TGCGGCAGGTGGTGGTGCTA+TGG | 0.506524 | 7:-86838176 | None:intergenic |
| GGGTGGTGGAGAGAAGGCAG+AGG | 0.506953 | 7:+86838644 | MsG0780041118.01.T01:CDS |
| AGAGTGGTGAATGGAGGAGC+GGG | 0.507484 | 7:+86838463 | MsG0780041118.01.T01:CDS |
| CCATAACAAACCGCTGGCGG+CGG | 0.510979 | 7:-86838436 | None:intergenic |
| AGACAACAGGTAACCAATGA+TGG | 0.512321 | 7:+86839175 | MsG0780041118.01.T01:CDS |
| ACTTGTCTGCAGCTCAGAAA+GGG | 0.519532 | 7:+86837909 | MsG0780041118.01.T01:CDS |
| CAACATTGTTGATGTTGTGA+TGG | 0.520957 | 7:-86838042 | None:intergenic |
| GTGGCAGTGGCACAAACTAT+GGG | 0.520968 | 7:+86838496 | MsG0780041118.01.T01:CDS |
| AACTTGTCTGCAGCTCAGAA+AGG | 0.521964 | 7:+86837908 | MsG0780041118.01.T01:CDS |
| CGCCAAAAGTCGGTTGTCGA+GGG | 0.522444 | 7:-86838084 | None:intergenic |
| GCTTCATTTGCTATTGGCGG+CGG | 0.528163 | 7:+86838277 | MsG0780041118.01.T01:CDS |
| TATGGAGGGAGAGTGGTGAA+TGG | 0.528806 | 7:+86838454 | MsG0780041118.01.T01:CDS |
| CGCCAGCGGTTTGTTATGGA+GGG | 0.528969 | 7:+86838440 | MsG0780041118.01.T01:CDS |
| ACTAGGGATAGTATAGGTAC+GGG | 0.531284 | 7:+86838403 | MsG0780041118.01.T01:CDS |
| AGAAACTGAGAGGCTTAAGA+AGG | 0.532363 | 7:+86839361 | MsG0780041118.01.T01:CDS |
| TAACAACTCTACAATGGCTC+AGG | 0.534100 | 7:+86838252 | MsG0780041118.01.T01:CDS |
| TGTTGGGAATGGTAAGACTA+GGG | 0.535160 | 7:+86838387 | MsG0780041118.01.T01:CDS |
| GGAGGGAGAGTGGTGAATGG+AGG | 0.540052 | 7:+86838457 | MsG0780041118.01.T01:CDS |
| GAATTTCGGGTCCATGAACA+TGG | 0.544850 | 7:+86837805 | MsG0780041118.01.T01:CDS |
| TTTAAGAGGAAGAAAGAGGA+TGG | 0.548041 | 7:+86838603 | MsG0780041118.01.T01:CDS |
| CGCTGTCACAGAGGCTGTGT+TGG | 0.549331 | 7:-86837778 | None:intergenic |
| TCGCCAAAAGTCGGTTGTCG+AGG | 0.549884 | 7:-86838085 | None:intergenic |
| TTGAAAGGGTGGTGGAGAGA+AGG | 0.555209 | 7:+86838638 | MsG0780041118.01.T01:CDS |
| GTGGCACAAACTATGGGGAT+GGG | 0.557884 | 7:+86838502 | MsG0780041118.01.T01:CDS |
| CTCCCTCCATAACAAACCGC+TGG | 0.558325 | 7:-86838442 | None:intergenic |
| GTAGTTAGGGAACAACAGTC+TGG | 0.560019 | 7:+86838142 | MsG0780041118.01.T01:CDS |
| TTCTCAACTGAAACAGGCAC+TGG | 0.564684 | 7:+86839035 | MsG0780041118.01.T01:CDS |
| TGGTTGATGGTCCTGTTGAA+AGG | 0.565970 | 7:+86838623 | MsG0780041118.01.T01:CDS |
| GGCTGTGTTGGAACTCGTCG+AGG | 0.566650 | 7:-86837766 | None:intergenic |
| GGTTCGGGGTATGTTGGGAA+TGG | 0.567692 | 7:+86838376 | MsG0780041118.01.T01:CDS |
| CAGCAGCAGTGTCATCTCAC+CGG | 0.569711 | 7:+86838197 | MsG0780041118.01.T01:CDS |
| ATGGTTTAAGAGGAAGAAAG+AGG | 0.570839 | 7:+86838599 | MsG0780041118.01.T01:CDS |
| TTGGAGAGCCTTCGGGTTCG+GGG | 0.572733 | 7:+86838362 | MsG0780041118.01.T01:CDS |
| TGTGCCACCGTTTGGTATGG+CGG | 0.573089 | 7:-86838325 | None:intergenic |
| AGGATTTCTTGGTTAAAGCA+GGG | 0.574066 | 7:+86838119 | MsG0780041118.01.T01:CDS |
| TGATGGTCCTGTTGAAAGGG+TGG | 0.574869 | 7:+86838627 | MsG0780041118.01.T01:CDS |
| TTCTTCAGGCTGAACTAGAG+AGG | 0.575021 | 7:+86839146 | MsG0780041118.01.T01:intron |
| GGTAAGACTAGGGATAGTAT+AGG | 0.577774 | 7:+86838397 | MsG0780041118.01.T01:CDS |
| ACTGCGGCGTAATGCTGCTG+GGG | 0.580500 | 7:-86838220 | None:intergenic |
| AGGAGCGGGCGGTTATGGTG+TGG | 0.583622 | 7:+86838477 | MsG0780041118.01.T01:CDS |
| GTGAGATGAATTGGCAACAA+GGG | 0.583790 | 7:+86837636 | None:intergenic |
| CCATACCAAACGGTGGCACA+GGG | 0.583912 | 7:+86838328 | MsG0780041118.01.T01:CDS |
| TGGGATTGGAAACGAAAACT+CGG | 0.584083 | 7:+86838552 | MsG0780041118.01.T01:CDS |
| GTAGAATCATTGCAGAGGGA+AGG | 0.584321 | 7:+86837662 | MsG0780041118.01.T01:CDS |
| CGGCGGTGGGAATCTGAATG+TGG | 0.590238 | 7:+86838297 | MsG0780041118.01.T01:CDS |
| ATGTTGGGAATGGTAAGACT+AGG | 0.593588 | 7:+86838386 | MsG0780041118.01.T01:CDS |
| GGTTGCGCCGCCATACCAAA+CGG | 0.595175 | 7:+86838318 | MsG0780041118.01.T01:CDS |
| GTATCCTCCGCCGCCGCCAG+CGG | 0.598153 | 7:+86838426 | MsG0780041118.01.T01:CDS |
| CAACACAGCCTCTGTGACAG+CGG | 0.601697 | 7:+86837779 | MsG0780041118.01.T01:CDS |
| AATGTCATCTCGCCAAAAGT+CGG | 0.605885 | 7:-86838094 | None:intergenic |
| GTGAGATGACACTGCTGCTG+CGG | 0.608010 | 7:-86838194 | None:intergenic |
| TGGTCCTGTTGAAAGGGTGG+TGG | 0.612440 | 7:+86838630 | MsG0780041118.01.T01:CDS |
| GGAGGTAGAATCATTGCAGA+GGG | 0.612581 | 7:+86837658 | MsG0780041118.01.T01:CDS |
| GGTGAGATGAATTGGCAACA+AGG | 0.616844 | 7:+86837635 | None:intergenic |
| CGGTTGTCGAGGGGTAGACT+CGG | 0.617759 | 7:-86838074 | None:intergenic |
| GAGAGTGGTGAATGGAGGAG+CGG | 0.626383 | 7:+86838462 | MsG0780041118.01.T01:CDS |
| TCCTAATAACAACTCTACAA+TGG | 0.627967 | 7:+86838246 | MsG0780041118.01.T01:CDS |
| GCACAAACTATGGGGATGGG+CGG | 0.628434 | 7:+86838505 | MsG0780041118.01.T01:CDS |
| GGTTTGTTATGGAGGGAGAG+TGG | 0.634679 | 7:+86838447 | MsG0780041118.01.T01:CDS |
| GATGAATTGGCAACAAGGGG+AGG | 0.635893 | 7:+86837640 | None:intergenic |
| TGAGATGAATTGGCAACAAG+GGG | 0.639163 | 7:+86837637 | None:intergenic |
| CCTCCATAACAAACCGCTGG+CGG | 0.640926 | 7:-86838439 | None:intergenic |
| GGATTTCTTGGTTAAAGCAG+GGG | 0.646725 | 7:+86838120 | MsG0780041118.01.T01:CDS |
| CCAACATACCCCGAACCCGA+AGG | 0.649040 | 7:-86838370 | None:intergenic |
| GCCAAAAGTCGGTTGTCGAG+GGG | 0.657167 | 7:-86838083 | None:intergenic |
| GCTGTGTTGGAACTCGTCGA+GGG | 0.657810 | 7:-86837765 | None:intergenic |
| GGGATTGGAAACGAAAACTC+GGG | 0.662976 | 7:+86838553 | MsG0780041118.01.T01:CDS |
| GTGGTGAATGGAGGAGCGGG+CGG | 0.672029 | 7:+86838466 | MsG0780041118.01.T01:CDS |
| GGGAGGTAGAATCATTGCAG+AGG | 0.672753 | 7:+86837657 | MsG0780041118.01.T01:CDS |
| TACCAAACGGTGGCACAGGG+AGG | 0.683725 | 7:+86838331 | MsG0780041118.01.T01:CDS |
| TGCGCCGCCATACCAAACGG+TGG | 0.683832 | 7:+86838321 | MsG0780041118.01.T01:CDS |
| TGGCAGTGGCACAAACTATG+GGG | 0.694881 | 7:+86838497 | MsG0780041118.01.T01:CDS |
| ATTGGAAACGAAAACTCGGG+TGG | 0.712637 | 7:+86838556 | MsG0780041118.01.T01:CDS |
| TATGTGAAGAAAACATCACA+TGG | 0.715611 | 7:+86839398 | MsG0780041118.01.T01:CDS |
| AAAGCAAAAGAGAAACTGAG+AGG | 0.716117 | 7:+86839351 | MsG0780041118.01.T01:CDS |
| AATTCTTGCCGCTGTCACAG+AGG | 0.718674 | 7:-86837787 | None:intergenic |
| CTAGGGATAGTATAGGTACG+GGG | 0.720083 | 7:+86838404 | MsG0780041118.01.T01:CDS |
| GTTGTTATTAGGATACACTG+CGG | 0.806201 | 7:-86838236 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTAAAGTATAAAATAAT+TGG | - | Chr7:86838737-86838756 | None:intergenic | 10.0% |
| !! | TTATATTTATATACTATTGA+AGG | + | Chr7:86838809-86838828 | MsG0780041118.01.T01:intron | 10.0% |
| !! | AAATAATTGGTTAAAATTTC+AGG | - | Chr7:86838724-86838743 | None:intergenic | 15.0% |
| !! | TATATATACATAAGAATTTG+TGG | - | Chr7:86838772-86838791 | None:intergenic | 15.0% |
| !!! | CAAACATATTATTTCTAATT+TGG | - | Chr7:86838891-86838910 | None:intergenic | 15.0% |
| !! | TCCATTTGATTCAAAATAAA+AGG | - | Chr7:86839245-86839264 | None:intergenic | 20.0% |
| !!! | TAATGTCTTTAAATTTTCTG+TGG | - | Chr7:86839217-86839236 | None:intergenic | 20.0% |
| !!! | TCCTTTTATTTTGAATCAAA+TGG | + | Chr7:86839241-86839260 | MsG0780041118.01.T01:intron | 20.0% |
| ! | ATGAGTTTCTAAGTAGTATT+TGG | + | Chr7:86837828-86837847 | MsG0780041118.01.T01:CDS | 25.0% |
| ! | ATTATAGTTTAGACCATCAT+TGG | - | Chr7:86839191-86839210 | None:intergenic | 25.0% |
| ! | ATTGATATGAATGGTTTAAG+AGG | + | Chr7:86838589-86838608 | MsG0780041118.01.T01:CDS | 25.0% |
| ! | GAAAGAAAATTGTGTTACAA+AGG | - | Chr7:86838953-86838972 | None:intergenic | 25.0% |
| !! | GACATTAGTTTAAGAAGAAT+TGG | + | Chr7:86838833-86838852 | MsG0780041118.01.T01:intron | 25.0% |
| CTGTAATAGTTAACGTTGTT+TGG | - | Chr7:86839066-86839085 | None:intergenic | 30.0% | |
| TATGTGAAGAAAACATCACA+TGG | + | Chr7:86839398-86839417 | MsG0780041118.01.T01:CDS | 30.0% | |
| TCCTAATAACAACTCTACAA+TGG | + | Chr7:86838246-86838265 | MsG0780041118.01.T01:CDS | 30.0% | |
| ! | ATTTTCTTTCTTGCTTATGC+AGG | + | Chr7:86838963-86838982 | MsG0780041118.01.T01:intron | 30.0% |
| ! | CAATTTGGGATTGATATGAA+TGG | + | Chr7:86838580-86838599 | MsG0780041118.01.T01:CDS | 30.0% |
| ! | GTTGTTGCTGTTATTATTGT+TGG | - | Chr7:86837885-86837904 | None:intergenic | 30.0% |
| ! | TCATGCTTCTTTTATTCTTC+AGG | + | Chr7:86839132-86839151 | MsG0780041118.01.T01:intron | 30.0% |
| AAAGCAAAAGAGAAACTGAG+AGG | + | Chr7:86839351-86839370 | MsG0780041118.01.T01:CDS | 35.0% | |
| AGAGAATTCTCAACTGAAAC+AGG | + | Chr7:86839029-86839048 | MsG0780041118.01.T01:CDS | 35.0% | |
| AGGATTTCTTGGTTAAAGCA+GGG | + | Chr7:86838119-86838138 | MsG0780041118.01.T01:CDS | 35.0% | |
| ATGGTTTAAGAGGAAGAAAG+AGG | + | Chr7:86838599-86838618 | MsG0780041118.01.T01:CDS | 35.0% | |
| CAACATTGTTGATGTTGTGA+TGG | - | Chr7:86838045-86838064 | None:intergenic | 35.0% | |
| GGAAAACTGTTGAACAAGTT+TGG | + | Chr7:86837993-86838012 | MsG0780041118.01.T01:CDS | 35.0% | |
| GTGATTCAACTATACTGACA+AGG | + | Chr7:86839108-86839127 | MsG0780041118.01.T01:intron | 35.0% | |
| TAGAAACTCATCCATGTTCA+TGG | - | Chr7:86837819-86837838 | None:intergenic | 35.0% | |
| TTTAAGAGGAAGAAAGAGGA+TGG | + | Chr7:86838603-86838622 | MsG0780041118.01.T01:CDS | 35.0% | |
| ! | AATGTCATTTCTTCTTCGCT+TGG | + | Chr7:86837713-86837732 | MsG0780041118.01.T01:CDS | 35.0% |
| ! | AATTTCAGGAACCTGTTTTC+TGG | - | Chr7:86838710-86838729 | None:intergenic | 35.0% |
| ! | CAGGAATCGATAACGAATTT+TGG | - | Chr7:86837961-86837980 | None:intergenic | 35.0% |
| ! | GCCATTGTAGAGTTGTTATT+AGG | - | Chr7:86838250-86838269 | None:intergenic | 35.0% |
| ! | GTTGTTATTAGGATACACTG+CGG | - | Chr7:86838239-86838258 | None:intergenic | 35.0% |
| AAAACTCGGGTGGTCAATTT+GGG | + | Chr7:86838566-86838585 | MsG0780041118.01.T01:CDS | 40.0% | |
| AATGTCATCTCGCCAAAAGT+CGG | - | Chr7:86838097-86838116 | None:intergenic | 40.0% | |
| ACTAGGGATAGTATAGGTAC+GGG | + | Chr7:86838403-86838422 | MsG0780041118.01.T01:CDS | 40.0% | |
| AGAAACTGAGAGGCTTAAGA+AGG | + | Chr7:86839361-86839380 | MsG0780041118.01.T01:CDS | 40.0% | |
| AGACAACAGGTAACCAATGA+TGG | + | Chr7:86839175-86839194 | MsG0780041118.01.T01:CDS | 40.0% | |
| ATGTTGGGAATGGTAAGACT+AGG | + | Chr7:86838386-86838405 | MsG0780041118.01.T01:CDS | 40.0% | |
| GACTAGGGATAGTATAGGTA+CGG | + | Chr7:86838402-86838421 | MsG0780041118.01.T01:CDS | 40.0% | |
| GAGGATTTCTTGGTTAAAGC+AGG | + | Chr7:86838118-86838137 | MsG0780041118.01.T01:CDS | 40.0% | |
| GATGACATTGGAGGATTTCT+TGG | + | Chr7:86838108-86838127 | MsG0780041118.01.T01:CDS | 40.0% | |
| GGATTTCTTGGTTAAAGCAG+GGG | + | Chr7:86838120-86838139 | MsG0780041118.01.T01:CDS | 40.0% | |
| GGTAAGACTAGGGATAGTAT+AGG | + | Chr7:86838397-86838416 | MsG0780041118.01.T01:CDS | 40.0% | |
| TAACAACTCTACAATGGCTC+AGG | + | Chr7:86838252-86838271 | MsG0780041118.01.T01:CDS | 40.0% | |
| TGGGATTGGAAACGAAAACT+CGG | + | Chr7:86838552-86838571 | MsG0780041118.01.T01:CDS | 40.0% | |
| TGTTGGGAATGGTAAGACTA+GGG | + | Chr7:86838387-86838406 | MsG0780041118.01.T01:CDS | 40.0% | |
| TTACCTCATGCAGTGTTTAG+AGG | + | Chr7:86839296-86839315 | MsG0780041118.01.T01:intron | 40.0% | |
| TTTCCTCTAAACACTGCATG+AGG | - | Chr7:86839302-86839321 | None:intergenic | 40.0% | |
| ! | AAGATCTAGAGCCAGAAAAC+AGG | + | Chr7:86838696-86838715 | MsG0780041118.01.T01:CDS | 40.0% |
| ! | CTCTTTTGCTTTCTGAGCTT+TGG | - | Chr7:86839343-86839362 | None:intergenic | 40.0% |
| ! | TCAGAAAGGGATTAGCAAAC+AGG | + | Chr7:86837922-86837941 | MsG0780041118.01.T01:CDS | 40.0% |
| !! | ATCGATAACGAATTTTGGCG+AGG | - | Chr7:86837956-86837975 | None:intergenic | 40.0% |
| AACTTGTCTGCAGCTCAGAA+AGG | + | Chr7:86837908-86837927 | MsG0780041118.01.T01:CDS | 45.0% | |
| ACCTGTTAGTCCGGTTTCTT+CGG | + | Chr7:86838528-86838547 | MsG0780041118.01.T01:CDS | 45.0% | |
| ACTTGTCTGCAGCTCAGAAA+GGG | + | Chr7:86837909-86837928 | MsG0780041118.01.T01:CDS | 45.0% | |
| AGAGAGGAGAAGAAGACAAC+AGG | + | Chr7:86839162-86839181 | MsG0780041118.01.T01:CDS | 45.0% | |
| ATTGGAAACGAAAACTCGGG+TGG | + | Chr7:86838556-86838575 | MsG0780041118.01.T01:CDS | 45.0% | |
| CTAGGGATAGTATAGGTACG+GGG | + | Chr7:86838404-86838423 | MsG0780041118.01.T01:CDS | 45.0% | |
| GAAAACTCGGGTGGTCAATT+TGG | + | Chr7:86838565-86838584 | MsG0780041118.01.T01:CDS | 45.0% | |
| GGAAGAAAGAGGATGGTTGA+TGG | + | Chr7:86838610-86838629 | MsG0780041118.01.T01:CDS | 45.0% | |
| GGAGGTAGAATCATTGCAGA+GGG | + | Chr7:86837658-86837677 | MsG0780041118.01.T01:CDS | 45.0% | |
| GGGATTGGAAACGAAAACTC+GGG | + | Chr7:86838553-86838572 | MsG0780041118.01.T01:CDS | 45.0% | |
| GGTTAAAGCAGGGGTAGTTA+GGG | + | Chr7:86838129-86838148 | MsG0780041118.01.T01:CDS | 45.0% | |
| GTAGAATCATTGCAGAGGGA+AGG | + | Chr7:86837662-86837681 | MsG0780041118.01.T01:CDS | 45.0% | |
| GTAGTTAGGGAACAACAGTC+TGG | + | Chr7:86838142-86838161 | MsG0780041118.01.T01:CDS | 45.0% | |
| GTCGAGGGTGAGTGAATATA+TGG | - | Chr7:86837753-86837772 | None:intergenic | 45.0% | |
| TGGTTAAAGCAGGGGTAGTT+AGG | + | Chr7:86838128-86838147 | MsG0780041118.01.T01:CDS | 45.0% | |
| TGTGACAGCGGCAAGAATTT+CGG | + | Chr7:86837791-86837810 | MsG0780041118.01.T01:CDS | 45.0% | |
| TTAGTCCGGTTTCTTCGGAT+GGG | + | Chr7:86838533-86838552 | MsG0780041118.01.T01:CDS | 45.0% | |
| TTCTCAACTGAAACAGGCAC+TGG | + | Chr7:86839035-86839054 | MsG0780041118.01.T01:CDS | 45.0% | |
| TTCTTCAGGCTGAACTAGAG+AGG | + | Chr7:86839146-86839165 | MsG0780041118.01.T01:intron | 45.0% | |
| ! | GAATTTCGGGTCCATGAACA+TGG | + | Chr7:86837805-86837824 | MsG0780041118.01.T01:CDS | 45.0% |
| ! | GACTTTTGGCGAGATGACAT+TGG | + | Chr7:86838096-86838115 | MsG0780041118.01.T01:CDS | 45.0% |
| ! | TCAACAGTTTTCCTGCAGAG+AGG | - | Chr7:86837986-86838005 | None:intergenic | 45.0% |
| ! | TTTTGGCGAGATGACATTGG+AGG | + | Chr7:86838099-86838118 | MsG0780041118.01.T01:CDS | 45.0% |
| !! | CAGGCTGCTTCATTTGCTAT+TGG | + | Chr7:86838271-86838290 | MsG0780041118.01.T01:CDS | 45.0% |
| !! | GCTGCTTCATTTGCTATTGG+CGG | + | Chr7:86838274-86838293 | MsG0780041118.01.T01:CDS | 45.0% |
| !! | GGTTGATGGTCCTGTTGAAA+GGG | + | Chr7:86838624-86838643 | MsG0780041118.01.T01:CDS | 45.0% |
| !! | TGGTTGATGGTCCTGTTGAA+AGG | + | Chr7:86838623-86838642 | MsG0780041118.01.T01:CDS | 45.0% |
| !! | TGTTGGATGCAGCTTGTTGT+TGG | - | Chr7:86837868-86837887 | None:intergenic | 45.0% |
| AATTCTTGCCGCTGTCACAG+AGG | - | Chr7:86837790-86837809 | None:intergenic | 50.0% | |
| AGTGGCACAAACTATGGGGA+TGG | + | Chr7:86838501-86838520 | MsG0780041118.01.T01:CDS | 50.0% | |
| CCAATCCCATCCGAAGAAAC+CGG | - | Chr7:86838541-86838560 | None:intergenic | 50.0% | |
| GGGAGGTAGAATCATTGCAG+AGG | + | Chr7:86837657-86837676 | MsG0780041118.01.T01:CDS | 50.0% | |
| GTGACAGCGGCAAGAATTTC+GGG | + | Chr7:86837792-86837811 | MsG0780041118.01.T01:CDS | 50.0% | |
| GTGGCACAAACTATGGGGAT+GGG | + | Chr7:86838502-86838521 | MsG0780041118.01.T01:CDS | 50.0% | |
| GTGGCAGTGGCACAAACTAT+GGG | + | Chr7:86838496-86838515 | MsG0780041118.01.T01:CDS | 50.0% | |
| GTTAGTCCGGTTTCTTCGGA+TGG | + | Chr7:86838532-86838551 | MsG0780041118.01.T01:CDS | 50.0% | |
| TATGGAGGGAGAGTGGTGAA+TGG | + | Chr7:86838454-86838473 | MsG0780041118.01.T01:CDS | 50.0% | |
| TCCGAAGAAACCGGACTAAC+AGG | - | Chr7:86838532-86838551 | None:intergenic | 50.0% | |
| TGATGGTCCTGTTGAAAGGG+TGG | + | Chr7:86838627-86838646 | MsG0780041118.01.T01:CDS | 50.0% | |
| TGGCAGTGGCACAAACTATG+GGG | + | Chr7:86838497-86838516 | MsG0780041118.01.T01:CDS | 50.0% | |
| TGTGGCAGTGGCACAAACTA+TGG | + | Chr7:86838495-86838514 | MsG0780041118.01.T01:CDS | 50.0% | |
| !! | GCTTCATTTGCTATTGGCGG+CGG | + | Chr7:86838277-86838296 | MsG0780041118.01.T01:CDS | 50.0% |
| !! | GGTTTGTTATGGAGGGAGAG+TGG | + | Chr7:86838447-86838466 | MsG0780041118.01.T01:CDS | 50.0% |
| !! | TTGAAAGGGTGGTGGAGAGA+AGG | + | Chr7:86838638-86838657 | MsG0780041118.01.T01:CDS | 50.0% |
| AGAGTGGTGAATGGAGGAGC+GGG | + | Chr7:86838463-86838482 | MsG0780041118.01.T01:CDS | 55.0% | |
| CAACACAGCCTCTGTGACAG+CGG | + | Chr7:86837779-86837798 | MsG0780041118.01.T01:CDS | 55.0% | |
| CAGCAGCAGTGTCATCTCAC+CGG | + | Chr7:86838197-86838216 | MsG0780041118.01.T01:CDS | 55.0% | |
| CCATACCAAACGGTGGCACA+GGG | + | Chr7:86838328-86838347 | MsG0780041118.01.T01:CDS | 55.0% | |
| CCGGTTTCTTCGGATGGGAT+TGG | + | Chr7:86838538-86838557 | MsG0780041118.01.T01:CDS | 55.0% | |
| CCTCCATAACAAACCGCTGG+CGG | - | Chr7:86838442-86838461 | None:intergenic | 55.0% | |
| CGCCAAAAGTCGGTTGTCGA+GGG | - | Chr7:86838087-86838106 | None:intergenic | 55.0% | |
| CTCCCTCCATAACAAACCGC+TGG | - | Chr7:86838445-86838464 | None:intergenic | 55.0% | |
| CTCTCCACCACCCTTTCAAC+AGG | - | Chr7:86838637-86838656 | None:intergenic | 55.0% | |
| GAGAGTGGTGAATGGAGGAG+CGG | + | Chr7:86838462-86838481 | MsG0780041118.01.T01:CDS | 55.0% | |
| GCACAAACTATGGGGATGGG+CGG | + | Chr7:86838505-86838524 | MsG0780041118.01.T01:CDS | 55.0% | |
| GCCAAAAGTCGGTTGTCGAG+GGG | - | Chr7:86838086-86838105 | None:intergenic | 55.0% | |
| GCTGTGTTGGAACTCGTCGA+GGG | - | Chr7:86837768-86837787 | None:intergenic | 55.0% | |
| GGGAAGGAGAAGAAGCGATC+AGG | + | Chr7:86837678-86837697 | MsG0780041118.01.T01:CDS | 55.0% | |
| GGTTCGGGGTATGTTGGGAA+TGG | + | Chr7:86838376-86838395 | MsG0780041118.01.T01:CDS | 55.0% | |
| GTGAGATGACACTGCTGCTG+CGG | - | Chr7:86838197-86838216 | None:intergenic | 55.0% | |
| TCGCCAAAAGTCGGTTGTCG+AGG | - | Chr7:86838088-86838107 | None:intergenic | 55.0% | |
| TGGAGGAGTTGGAGAGCCTT+CGG | + | Chr7:86838354-86838373 | MsG0780041118.01.T01:CDS | 55.0% | |
| TGGTCCTGTTGAAAGGGTGG+TGG | + | Chr7:86838630-86838649 | MsG0780041118.01.T01:CDS | 55.0% | |
| TGTGCCACCGTTTGGTATGG+CGG | - | Chr7:86838328-86838347 | None:intergenic | 55.0% | |
| ! | AGTTGGAGAGCCTTCGGGTT+CGG | + | Chr7:86838360-86838379 | MsG0780041118.01.T01:CDS | 55.0% |
| ! | CTTCGGGTTCGGGGTATGTT+GGG | + | Chr7:86838371-86838390 | MsG0780041118.01.T01:CDS | 55.0% |
| !! | ACCCCTCGACAACCGACTTT+TGG | + | Chr7:86838082-86838101 | MsG0780041118.01.T01:CDS | 55.0% |
| !! | CGCCAGCGGTTTGTTATGGA+GGG | + | Chr7:86838440-86838459 | MsG0780041118.01.T01:CDS | 55.0% |
| !! | GTTTTCCTGCAGAGAGGTGC+AGG | - | Chr7:86837980-86837999 | None:intergenic | 55.0% |
| !! | TCATTTGCTATTGGCGGCGG+CGG | + | Chr7:86838280-86838299 | MsG0780041118.01.T01:CDS | 55.0% |
| AATGGAGGAGCGGGCGGTTA+TGG | + | Chr7:86838472-86838491 | MsG0780041118.01.T01:CDS | 60.0% | |
| ACACTGCGGCGTAATGCTGC+TGG | - | Chr7:86838225-86838244 | None:intergenic | 60.0% | |
| ACTGCGGCGTAATGCTGCTG+GGG | - | Chr7:86838223-86838242 | None:intergenic | 60.0% | |
| CACTGCGGCGTAATGCTGCT+GGG | - | Chr7:86838224-86838243 | None:intergenic | 60.0% | |
| CCAACATACCCCGAACCCGA+AGG | - | Chr7:86838373-86838392 | None:intergenic | 60.0% | |
| CCATAACAAACCGCTGGCGG+CGG | - | Chr7:86838439-86838458 | None:intergenic | 60.0% | |
| CCCTGTGCCACCGTTTGGTA+TGG | - | Chr7:86838331-86838350 | None:intergenic | 60.0% | |
| CGATTCCTGCACCTCTCTGC+AGG | + | Chr7:86837972-86837991 | MsG0780041118.01.T01:CDS | 60.0% | |
| CGCTGTCACAGAGGCTGTGT+TGG | - | Chr7:86837781-86837800 | None:intergenic | 60.0% | |
| CGGCGGTGGGAATCTGAATG+TGG | + | Chr7:86838297-86838316 | MsG0780041118.01.T01:CDS | 60.0% | |
| CGGTTGTCGAGGGGTAGACT+CGG | - | Chr7:86838077-86838096 | None:intergenic | 60.0% | |
| GATGGGCGGACCTGTTAGTC+CGG | + | Chr7:86838519-86838538 | MsG0780041118.01.T01:CDS | 60.0% | |
| GCCATACCAAACGGTGGCAC+AGG | + | Chr7:86838327-86838346 | MsG0780041118.01.T01:CDS | 60.0% | |
| GGAGGAGTTGGAGAGCCTTC+GGG | + | Chr7:86838355-86838374 | MsG0780041118.01.T01:CDS | 60.0% | |
| GGAGGGAGAGTGGTGAATGG+AGG | + | Chr7:86838457-86838476 | MsG0780041118.01.T01:CDS | 60.0% | |
| GGCTGTGTTGGAACTCGTCG+AGG | - | Chr7:86837769-86837788 | None:intergenic | 60.0% | |
| GGTTGCGCCGCCATACCAAA+CGG | + | Chr7:86838318-86838337 | MsG0780041118.01.T01:CDS | 60.0% | |
| TACCAAACGGTGGCACAGGG+AGG | + | Chr7:86838331-86838350 | MsG0780041118.01.T01:CDS | 60.0% | |
| TGGTGGAGAGAAGGCAGAGG+AGG | + | Chr7:86838647-86838666 | MsG0780041118.01.T01:CDS | 60.0% | |
| ! | CCTTCGGGTTCGGGGTATGT+TGG | + | Chr7:86838370-86838389 | MsG0780041118.01.T01:CDS | 60.0% |
| ! | GTTGGAGAGCCTTCGGGTTC+GGG | + | Chr7:86838361-86838380 | MsG0780041118.01.T01:CDS | 60.0% |
| ! | TTGGAGAGCCTTCGGGTTCG+GGG | + | Chr7:86838362-86838381 | MsG0780041118.01.T01:CDS | 60.0% |
| !! | CCGCCAGCGGTTTGTTATGG+AGG | + | Chr7:86838439-86838458 | MsG0780041118.01.T01:CDS | 60.0% |
| !! | GGTGGTGGTGCTATGGCAAC+TGG | - | Chr7:86838172-86838191 | None:intergenic | 60.0% |
| AGGAGCGGGCGGTTATGGTG+TGG | + | Chr7:86838477-86838496 | MsG0780041118.01.T01:CDS | 65.0% | |
| CAAACGGTGGCACAGGGAGG+TGG | + | Chr7:86838334-86838353 | MsG0780041118.01.T01:CDS | 65.0% | |
| CACCTCCCTGTGCCACCGTT+TGG | - | Chr7:86838336-86838355 | None:intergenic | 65.0% | |
| GATGACACTGCTGCTGCGGC+AGG | - | Chr7:86838193-86838212 | None:intergenic | 65.0% | |
| GCACAGGGAGGTGGAGGAGT+TGG | + | Chr7:86838343-86838362 | MsG0780041118.01.T01:CDS | 65.0% | |
| GGGCGGTTATGGTGTGGCAG+TGG | + | Chr7:86838483-86838502 | MsG0780041118.01.T01:CDS | 65.0% | |
| GTGGTGAATGGAGGAGCGGG+CGG | + | Chr7:86838466-86838485 | MsG0780041118.01.T01:CDS | 65.0% | |
| TAACAAACCGCTGGCGGCGG+CGG | - | Chr7:86838436-86838455 | None:intergenic | 65.0% | |
| TGCGCCGCCATACCAAACGG+TGG | + | Chr7:86838321-86838340 | MsG0780041118.01.T01:CDS | 65.0% | |
| ! | TGCGGCAGGTGGTGGTGCTA+TGG | - | Chr7:86838179-86838198 | None:intergenic | 65.0% |
| ! | TTGCTATTGGCGGCGGCGGT+GGG | + | Chr7:86838284-86838303 | MsG0780041118.01.T01:CDS | 65.0% |
| !! | CCGCCGCCAGCGGTTTGTTA+TGG | + | Chr7:86838436-86838455 | MsG0780041118.01.T01:CDS | 65.0% |
| !! | GGGTGGTGGAGAGAAGGCAG+AGG | + | Chr7:86838644-86838663 | MsG0780041118.01.T01:CDS | 65.0% |
| !! | TTTGCTATTGGCGGCGGCGG+TGG | + | Chr7:86838283-86838302 | MsG0780041118.01.T01:CDS | 65.0% |
| ACGGTGGCACAGGGAGGTGG+AGG | + | Chr7:86838337-86838356 | MsG0780041118.01.T01:CDS | 70.0% | |
| ACTGCTGCTGCGGCAGGTGG+TGG | - | Chr7:86838187-86838206 | None:intergenic | 70.0% | |
| CGGCGTAATGCTGCTGGGGC+CGG | - | Chr7:86838219-86838238 | None:intergenic | 70.0% | |
| GACACTGCTGCTGCGGCAGG+TGG | - | Chr7:86838190-86838209 | None:intergenic | 70.0% | |
| GTATCCTCCGCCGCCGCCAG+CGG | + | Chr7:86838426-86838445 | MsG0780041118.01.T01:CDS | 75.0% | |
| ! | CAAACCGCTGGCGGCGGCGG+AGG | - | Chr7:86838433-86838452 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 86837641 | 86839430 | 86837641 | ID=MsG0780041118.01;Name=MsG0780041118.01 |
| Chr7 | mRNA | 86837641 | 86839430 | 86837641 | ID=MsG0780041118.01.T01;Parent=MsG0780041118.01;Name=MsG0780041118.01.T01;_AED=0.49;_eAED=0.54;_QI=0|0|0|1|1|1|4|0|437 |
| Chr7 | exon | 86837641 | 86838717 | 86837641 | ID=MsG0780041118.01.T01:exon:11939;Parent=MsG0780041118.01.T01 |
| Chr7 | exon | 86838985 | 86839056 | 86838985 | ID=MsG0780041118.01.T01:exon:11940;Parent=MsG0780041118.01.T01 |
| Chr7 | exon | 86839154 | 86839196 | 86839154 | ID=MsG0780041118.01.T01:exon:11941;Parent=MsG0780041118.01.T01 |
| Chr7 | exon | 86839309 | 86839430 | 86839309 | ID=MsG0780041118.01.T01:exon:11942;Parent=MsG0780041118.01.T01 |
| Chr7 | CDS | 86837641 | 86838717 | 86837641 | ID=MsG0780041118.01.T01:cds;Parent=MsG0780041118.01.T01 |
| Chr7 | CDS | 86838985 | 86839056 | 86838985 | ID=MsG0780041118.01.T01:cds;Parent=MsG0780041118.01.T01 |
| Chr7 | CDS | 86839154 | 86839196 | 86839154 | ID=MsG0780041118.01.T01:cds;Parent=MsG0780041118.01.T01 |
| Chr7 | CDS | 86839309 | 86839430 | 86839309 | ID=MsG0780041118.01.T01:cds;Parent=MsG0780041118.01.T01 |
| Gene Sequence |
| Protein sequence |
