AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041251.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041251.01.T01 MTR_7g107640 91.781 219 4 1 68 272 4 222 3.28e-138 388
MsG0780041251.01.T01 MTR_1g088990 60.104 193 55 5 68 244 4 190 5.69e-51 166
MsG0780041251.01.T01 MTR_6g049250 63.235 68 24 1 1 68 8 74 5.96e-21 84.7
MsG0780041251.01.T01 MTR_2g037820 49.462 93 44 2 1 91 1 92 1.20e-17 76.6
MsG0780041251.01.T01 MTR_3g463030 75.556 45 11 0 24 68 31 75 1.69e-16 75.5
MsG0780041251.01.T01 MTR_3g463030 69.565 46 14 0 23 68 108 153 3.91e-16 74.3
MsG0780041251.01.T01 MTR_2g041250 72.727 44 12 0 23 66 41 84 2.77e-16 72.4
MsG0780041251.01.T01 MTR_3g463010 77.273 44 10 0 24 67 11 54 3.33e-15 73.6
MsG0780041251.01.T01 MTR_3g463010 72.727 44 12 0 24 67 85 128 1.05e-14 72.4
MsG0780041251.01.T01 MTR_7g072500 86.111 36 5 0 33 68 31 66 3.76e-15 69.3
MsG0780041251.01.T01 MTR_0047s0050 55.000 60 25 1 27 86 11 68 3.32e-12 60.8
MsG0780041251.01.T01 MTR_3g082090 61.111 54 14 2 11 57 22 75 2.51e-11 58.9
MsG0780041251.01.T01 MTR_5g065700 80.000 35 7 0 34 68 8 42 3.93e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041251.01.T01 AT4G03120 50.993 151 46 4 68 204 4 140 8.30e-26 101

Find 141 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATACAAGATGGCAAATA+AGG 0.183411 7:-88819268 None:intergenic
CCAATTCCTGGAAGTGTTCC+AGG 0.216520 7:+88818325 MsG0780041251.01.T01:CDS
TTTAATTGATCAAAGGATTA+AGG 0.233406 7:+88818201 MsG0780041251.01.T01:CDS
CTCCTAGTACGGTGTGGTTC+GGG 0.263877 7:+88815882 MsG0780041251.01.T01:CDS
CCTGGAAGTGTTCCAGGCTT+TGG 0.280632 7:+88818331 MsG0780041251.01.T01:CDS
CTTATCAGCAATTGATCAAT+TGG 0.281313 7:+88819240 MsG0780041251.01.T01:three_prime_UTR
CCTCCACCGCCGATGGTTCC+TGG 0.305205 7:+88818858 MsG0780041251.01.T01:CDS
CCACCAAGGTTGCCAATTCC+TGG 0.314338 7:+88818313 MsG0780041251.01.T01:CDS
CCAAAGCCTGGAACACTTCC+AGG 0.317815 7:-88818331 None:intergenic
TCCTTTGATCAATTAAACTT+TGG 0.339733 7:-88818195 None:intergenic
CCTTTGATCAATTAAACTTT+GGG 0.343098 7:-88818194 None:intergenic
TTGCTGTTTCCTATGGTAAC+TGG 0.345267 7:+88819119 MsG0780041251.01.T01:three_prime_UTR
GGAGGTAGTGTCGGCGGCCT+AGG 0.345269 7:-88818840 None:intergenic
TTATCAGCAATTGATCAATT+GGG 0.353344 7:+88819241 MsG0780041251.01.T01:three_prime_UTR
TTTGTTGCTCTTCAAATTGC+AGG 0.353398 7:-88818171 None:intergenic
GCAAGAATAAGTATTGTATT+AGG 0.354072 7:-88819100 None:intergenic
GCTGGTGCTGCAGTGTTTCC+AGG 0.361140 7:-88818876 None:intergenic
CTTTCATAGCCTCCGGTTGA+TGG 0.365671 7:-88819002 None:intergenic
GTAGTGTCGGCGGCCTAGGA+AGG 0.369695 7:-88818836 None:intergenic
TCTCCTAGTACGGTGTGGTT+CGG 0.369874 7:+88815881 MsG0780041251.01.T01:CDS
TTCCATACAAAATAGCATTA+TGG 0.372332 7:-88819074 None:intergenic
CCTGGAACACTTCCAGGAAT+TGG 0.381410 7:-88818325 None:intergenic
CTTATTCTTGCTGTTTCCTA+TGG 0.391921 7:+88819112 MsG0780041251.01.T01:three_prime_UTR
TGGTATCTACCTGGTGCAAT+AGG 0.410893 7:-88818406 None:intergenic
CCTCTCATTCCGATGTGATT+CGG 0.420366 7:-88816022 None:intergenic
CATTGTCGTGCCTTGTGCAC+TGG 0.426833 7:-88815972 None:intergenic
GGTGGCAAGATGGGCATAGA+AGG 0.429555 7:-88818292 None:intergenic
AACCTTGGTGGTGGCAAGAT+GGG 0.436638 7:-88818301 None:intergenic
CAACCTTGGTGGTGGCAAGA+TGG 0.441119 7:-88818302 None:intergenic
GTTTGTTTGACCAGGTACTA+AGG 0.450520 7:-88818811 None:intergenic
GGGACGAACCAAGCGAAAAC+TGG 0.451007 7:+88815903 MsG0780041251.01.T01:CDS
CCGAATCACATCGGAATGAG+AGG 0.451887 7:+88816022 MsG0780041251.01.T01:CDS
TCCCCGAACCACACCGTACT+AGG 0.452257 7:-88815884 None:intergenic
TTTATATTTGCCATGGTCCA+TGG 0.452961 7:+88819188 MsG0780041251.01.T01:three_prime_UTR
CACCCACCGTTGACGAGGAC+AGG 0.454539 7:+88815939 MsG0780041251.01.T01:CDS
AACTCATCAGCATTGTCAAC+CGG 0.465366 7:+88818945 MsG0780041251.01.T01:CDS
CCTGGCCTAGGCATCATCAT+AGG 0.467436 7:-88818382 None:intergenic
CCAGGTTAGTTATTTCCCTC+AGG 0.467720 7:-88819047 None:intergenic
AACACACAACCACCATCAAC+CGG 0.468559 7:+88818990 MsG0780041251.01.T01:CDS
AAATACAAGATGGCAAATAA+GGG 0.472960 7:-88819267 None:intergenic
CCTGGTGCTCCCTTAGTACC+TGG 0.473641 7:+88818801 MsG0780041251.01.T01:CDS
CCAGGAATTGGCAACCTTGG+TGG 0.474102 7:-88818313 None:intergenic
GGAAGTGTTCCAGGCTTTGG+TGG 0.480386 7:+88818334 MsG0780041251.01.T01:CDS
CCCAAAGTTTAATTGATCAA+AGG 0.485071 7:+88818194 MsG0780041251.01.T01:CDS
CCAGGAACCATCGGCGGTGG+AGG 0.485573 7:-88818858 None:intergenic
TCCCTCAGGTGGTTGAGTGT+TGG 0.485768 7:-88819033 None:intergenic
GGTAAAGTTGGTGGCATGCC+AGG 0.487428 7:-88818774 None:intergenic
ATTGTAACTTTCATAGCCTC+CGG 0.489635 7:-88818964 None:intergenic
ATTGTAACTTTCATAGCCTC+CGG 0.489635 7:-88819009 None:intergenic
AGAAGGCCTTTGAGCCATCA+TGG 0.494280 7:-88818275 None:intergenic
GTCAAACAAACACCCTTCCT+AGG 0.498113 7:+88818823 MsG0780041251.01.T01:CDS
GCACCAGGTGGAGGTAAAGT+TGG 0.500332 7:-88818786 None:intergenic
ATCATCATAGGTCTCATCCC+TGG 0.503523 7:-88818370 None:intergenic
CGGTTCCTCTAGAAACTGTC+GGG 0.504098 7:-88816002 None:intergenic
AGTTGTTGTCCACCAAAGCC+TGG 0.506526 7:-88818343 None:intergenic
GGAAGGGTGTTTGTTTGACC+AGG 0.514254 7:-88818819 None:intergenic
CTTCCAGGAATTGGCAACCT+TGG 0.516837 7:-88818316 None:intergenic
TTTCCTATGGTAACTGGCAG+AGG 0.517433 7:+88819125 MsG0780041251.01.T01:three_prime_UTR
TCCCCTGTCCTCGTCAACGG+TGG 0.518489 7:-88815942 None:intergenic
TCCCATACCTACACAGCCTT+AGG 0.519890 7:-88816048 None:intergenic
CAAAGGATTAAGGAACATCT+CGG 0.523084 7:+88818211 MsG0780041251.01.T01:CDS
GGTGGACAACAACTATTCCC+AGG 0.527961 7:+88818352 MsG0780041251.01.T01:CDS
CCCCTGTCCTCGTCAACGGT+GGG 0.529412 7:-88815941 None:intergenic
TTTCCAGGAACCATCGGCGG+TGG 0.530281 7:-88818861 None:intergenic
TTATATTTGCCATGGTCCAT+GGG 0.532263 7:+88819189 MsG0780041251.01.T01:three_prime_UTR
GCTGCAGCGTTTCAGCAAGT+TGG 0.533341 7:+88818238 MsG0780041251.01.T01:CDS
TATCAGCAATTGATCAATTG+GGG 0.538055 7:+88819242 MsG0780041251.01.T01:three_prime_UTR
CCCTAAACTTACAGAATCGT+GGG 0.543253 7:-88817115 None:intergenic
TTTGTTTGACCAGGTACTAA+GGG 0.547282 7:-88818810 None:intergenic
GGAATTGGCAACCTTGGTGG+TGG 0.547520 7:-88818310 None:intergenic
CCAGGTACTAAGGGAGCACC+AGG 0.547558 7:-88818801 None:intergenic
CCACCAACTTTACCTCCACC+TGG 0.547840 7:+88818783 MsG0780041251.01.T01:CDS
CACTCCCCTGTCCTCGTCAA+CGG 0.548204 7:-88815945 None:intergenic
GGTTAGTTATTTCCCTCAGG+TGG 0.548329 7:-88819044 None:intergenic
TTAATCCCATGATGGCTCAA+AGG 0.553842 7:+88818269 MsG0780041251.01.T01:CDS
GGTGCAATAGGACCTGGCCT+AGG 0.554182 7:-88818394 None:intergenic
AGATATAATCGCAACTCCCA+TGG 0.554463 7:-88819205 None:intergenic
CTACCTGGTGCAATAGGACC+TGG 0.555824 7:-88818400 None:intergenic
TCGGTTCCTCTAGAAACTGT+CGG 0.558631 7:-88816003 None:intergenic
TCATCATAGGTCTCATCCCT+GGG 0.559450 7:-88818369 None:intergenic
GAAGGCCTTTGAGCCATCAT+GGG 0.560813 7:-88818274 None:intergenic
GGTTGATGGTGGTTGTGTGT+TGG 0.561776 7:-88818988 None:intergenic
ACCCACCGTTGACGAGGACA+GGG 0.562356 7:+88815940 MsG0780041251.01.T01:CDS
ACTGCAGCACCAGCCTCCAA+TGG 0.564353 7:+88818885 MsG0780041251.01.T01:CDS
GGTTGACAATGCTGATGAGT+TGG 0.566426 7:-88818943 None:intergenic
TACATTGCTGATGAAACCAT+GGG 0.570715 7:-88818915 None:intergenic
TAGTGTCGGCGGCCTAGGAA+GGG 0.571573 7:-88818835 None:intergenic
TTGGAATGTAGTTTCTCAAG+CGG 0.572421 7:+88819313 MsG0780041251.01.T01:three_prime_UTR
GACAATGCTGATGAGTTGGC+TGG 0.572563 7:-88818939 None:intergenic
CCAGGTGGAGGTAAAGTTGG+TGG 0.573537 7:-88818783 None:intergenic
TCGGAATGAGAGGGATCCTA+AGG 0.574480 7:+88816032 MsG0780041251.01.T01:CDS
GACACTACCTCCACCGCCGA+TGG 0.575760 7:+88818851 MsG0780041251.01.T01:CDS
ACCCTAAACTTACAGAATCG+TGG 0.576458 7:-88817116 None:intergenic
TCCTAGTACGGTGTGGTTCG+GGG 0.577666 7:+88815883 MsG0780041251.01.T01:CDS
CCTATGATGATGCCTAGGCC+AGG 0.577794 7:+88818382 MsG0780041251.01.T01:CDS
AAAGGATTAAGGAACATCTC+GGG 0.582177 7:+88818212 MsG0780041251.01.T01:CDS
AGAGCAGACCTCTCCTAGTA+CGG 0.583711 7:+88815871 MsG0780041251.01.T01:CDS
TGCCAACACTCAACCACCTG+AGG 0.583983 7:+88819031 MsG0780041251.01.T01:CDS
ATCGGCGGTGGAGGTAGTGT+CGG 0.584119 7:-88818849 None:intergenic
TCATAGCCTCCGGTTGATGG+TGG 0.584534 7:-88818999 None:intergenic
CGTTGACGAGGACAGGGGAG+TGG 0.585978 7:+88815946 MsG0780041251.01.T01:CDS
GGAGTGGTCGCCAGTGCACA+AGG 0.586710 7:+88815962 MsG0780041251.01.T01:CDS
GCAGTGTTTCCAGGAACCAT+CGG 0.587962 7:-88818867 None:intergenic
CTCCCTCTGCCAGTTACCAT+AGG 0.589135 7:-88819128 None:intergenic
CCTGAGGGAAATAACTAACC+TGG 0.591795 7:+88819047 MsG0780041251.01.T01:exon
ATGTAGTTTCTCAAGCGGCA+TGG 0.592195 7:+88819318 MsG0780041251.01.T01:three_prime_UTR
TGAGACCTATGATGATGCCT+AGG 0.594416 7:+88818377 MsG0780041251.01.T01:CDS
GAGGGATCCTAAGGCTGTGT+AGG 0.596041 7:+88816041 MsG0780041251.01.T01:CDS
ACTAAGGGAGCACCAGGTGG+AGG 0.596231 7:-88818795 None:intergenic
ACGAACCAAGCGAAAACTGG+TGG 0.601961 7:+88815906 MsG0780041251.01.T01:CDS
GGATGTGAGGAAAAGTTGTA+CGG 0.602776 7:+88819339 MsG0780041251.01.T01:three_prime_UTR
AAATAGCATTATGGCAGACC+AGG 0.604924 7:-88819065 None:intergenic
GTGGACAACAACTATTCCCA+GGG 0.611701 7:+88818353 MsG0780041251.01.T01:CDS
GCACAAGGCACGACAATGAG+CGG 0.614015 7:+88815977 MsG0780041251.01.T01:CDS
TTCCTATGGTAACTGGCAGA+GGG 0.614100 7:+88819126 MsG0780041251.01.T01:three_prime_UTR
AGGCCAGGTCCTATTGCACC+AGG 0.620759 7:+88818397 MsG0780041251.01.T01:CDS
TCTCAAGCGGCATGGATGTG+AGG 0.620886 7:+88819326 MsG0780041251.01.T01:three_prime_UTR
ATGTTGCTACAAATACAAGA+TGG 0.624670 7:-88819277 None:intergenic
TGTAACACCCACCGTTGACG+AGG 0.627271 7:+88815934 MsG0780041251.01.T01:CDS
GTGTTTCCAGGAACCATCGG+CGG 0.629869 7:-88818864 None:intergenic
GGAGAATATTATTCTGCACC+TGG 0.631856 7:+88818756 MsG0780041251.01.T01:intron
TACAGAATCGTGGGTCAAGT+AGG 0.633490 7:-88817106 None:intergenic
CGAATCACATCGGAATGAGA+GGG 0.636701 7:+88816023 MsG0780041251.01.T01:CDS
ATCGCAACTCCCATGGACCA+TGG 0.638945 7:-88819198 None:intergenic
GGCGGTGGAGGTAGTGTCGG+CGG 0.639369 7:-88818846 None:intergenic
TGCCCATCTTGCCACCACCA+AGG 0.656688 7:+88818299 MsG0780041251.01.T01:CDS
ATACATTGCTGATGAAACCA+TGG 0.663040 7:-88818916 None:intergenic
CGGCTCCCGACAGTTTCTAG+AGG 0.664939 7:+88815997 MsG0780041251.01.T01:CDS
ATCAGCAATTGATCAATTGG+GGG 0.664985 7:+88819243 MsG0780041251.01.T01:three_prime_UTR
GCCAACACTCAACCACCTGA+GGG 0.666069 7:+88819032 MsG0780041251.01.T01:CDS
GAACCACACCGTACTAGGAG+AGG 0.676353 7:-88815879 None:intergenic
TCATCAGCATTGTCAACCGG+AGG 0.677187 7:+88818948 MsG0780041251.01.T01:CDS
AGACCTCTCCTAGTACGGTG+TGG 0.685387 7:+88815876 MsG0780041251.01.T01:CDS
CGAACCAAGCGAAAACTGGT+GGG 0.689187 7:+88815907 MsG0780041251.01.T01:CDS
GGTACTAAGGGAGCACCAGG+TGG 0.691774 7:-88818798 None:intergenic
CCCACCGTTGACGAGGACAG+GGG 0.692448 7:+88815941 MsG0780041251.01.T01:CDS
CTAGAGGAACCGAATCACAT+CGG 0.696337 7:+88816013 MsG0780041251.01.T01:CDS
ACACAACCACCATCAACCGG+AGG 0.721262 7:+88818993 MsG0780041251.01.T01:CDS
ACATTGCTGATGAAACCATG+GGG 0.722803 7:-88818914 None:intergenic
ATTGCTGATGAAACCATGGG+GGG 0.729472 7:-88818912 None:intergenic
CATTGCTGATGAAACCATGG+GGG 0.738483 7:-88818913 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATAATGTGTATATTA+AGG + Chr7:88817539-88817558 MsG0780041251.01.T01:intron 10.0%
!!! ATTTTCACATTAAAATTTTA+GGG + Chr7:88816823-88816842 MsG0780041251.01.T01:intron 10.0%
!!! TATTTTCACATTAAAATTTT+AGG + Chr7:88816822-88816841 MsG0780041251.01.T01:intron 10.0%
!!! CAACATTATTTTAAGATTTT+TGG + Chr7:88819294-88819313 MsG0780041251.01.T01:three_prime_UTR 15.0%
!!! TTTACCTTGAATTTTTTTTA+AGG + Chr7:88816760-88816779 MsG0780041251.01.T01:intron 15.0%
!!! TTTTATTTGGTAAAAAATAG+TGG + Chr7:88817562-88817581 MsG0780041251.01.T01:intron 15.0%
!! TAAAACATACATACACAAAA+TGG - Chr7:88817476-88817495 None:intergenic 20.0%
!! TCTTCCTTAAAAAAAATTCA+AGG - Chr7:88816767-88816786 None:intergenic 20.0%
!! TGAAAATAATCTATCTATCT+TGG - Chr7:88816810-88816829 None:intergenic 20.0%
!! TTTAATTGATCAAAGGATTA+AGG + Chr7:88818201-88818220 MsG0780041251.01.T01:CDS 20.0%
!!! GTGTATATTAAGGTTTTATT+TGG + Chr7:88817549-88817568 MsG0780041251.01.T01:intron 20.0%
!!! TAATGTCTTTTCATCTTTTA+AGG + Chr7:88818129-88818148 MsG0780041251.01.T01:intron 20.0%
!!! TTTGTTTTAATTCCATGAAA+AGG + Chr7:88817167-88817186 MsG0780041251.01.T01:intron 20.0%
! AAAAAAAAAGTGAGTGATTG+AGG - Chr7:88817047-88817066 None:intergenic 25.0%
! AAATACAAGATGGCAAATAA+GGG - Chr7:88819270-88819289 None:intergenic 25.0%
! AACTAAAAATTCTTTCACTC+AGG - Chr7:88819374-88819393 None:intergenic 25.0%
! ACAACAAGATGATTGTATTA+AGG + Chr7:88818052-88818071 MsG0780041251.01.T01:intron 25.0%
! ATGACTAAAAAAGACTCATT+TGG - Chr7:88817948-88817967 None:intergenic 25.0%
! ATGATTGAATCTGTAGTATT+TGG + Chr7:88817641-88817660 MsG0780041251.01.T01:intron 25.0%
! CAGAAAGAACATACAATTAA+GGG - Chr7:88817319-88817338 None:intergenic 25.0%
! CCTTTGATCAATTAAACTTT+GGG - Chr7:88818197-88818216 None:intergenic 25.0%
! GTAGTATTTGGTAAAATTAG+TGG + Chr7:88817705-88817724 MsG0780041251.01.T01:intron 25.0%
! TATATCTGCATGTAAAATGA+GGG - Chr7:88818473-88818492 None:intergenic 25.0%
! TCCTTTGATCAATTAAACTT+TGG - Chr7:88818198-88818217 None:intergenic 25.0%
! TTATCAGCAATTGATCAATT+GGG + Chr7:88819241-88819260 MsG0780041251.01.T01:three_prime_UTR 25.0%
! TTCCATACAAAATAGCATTA+TGG - Chr7:88819077-88819096 None:intergenic 25.0%
!! ATTTTTCCAACTATGTTACT+TGG + Chr7:88818590-88818609 MsG0780041251.01.T01:intron 25.0%
!! GAAGAATGATGAATGTATTT+TGG - Chr7:88816561-88816580 None:intergenic 25.0%
!! GCAAGAATAAGTATTGTATT+AGG - Chr7:88819103-88819122 None:intergenic 25.0%
!! TAGGGTTATACAAATTTTGA+TGG + Chr7:88817133-88817152 MsG0780041251.01.T01:intron 25.0%
!! TTGATTGACTTTCATTTCTT+GGG + Chr7:88818560-88818579 MsG0780041251.01.T01:intron 25.0%
!!! AATGATGAATGTATTTTGGT+GGG - Chr7:88816557-88816576 None:intergenic 25.0%
!!! AGTATTGTTAGTTTTTATGC+TGG - Chr7:88817389-88817408 None:intergenic 25.0%
!!! GTTTTTTCATTTGAGATATC+AGG + Chr7:88817784-88817803 MsG0780041251.01.T01:intron 25.0%
AAACAACCAAGTAACATAGT+TGG - Chr7:88818599-88818618 None:intergenic 30.0%
AAGATGCATCTTGTTGATAT+AGG - Chr7:88816116-88816135 None:intergenic 30.0%
ATGTTGCTACAAATACAAGA+TGG - Chr7:88819280-88819299 None:intergenic 30.0%
CAAATACAAGATGGCAAATA+AGG - Chr7:88819271-88819290 None:intergenic 30.0%
CAAATGATATAGGCATTCAT+TGG - Chr7:88816522-88816541 None:intergenic 30.0%
CAATGAATGCCTATATCATT+TGG + Chr7:88816520-88816539 MsG0780041251.01.T01:intron 30.0%
CCCAAAGTTTAATTGATCAA+AGG + Chr7:88818194-88818213 MsG0780041251.01.T01:CDS 30.0%
CTATATCTGCATGTAAAATG+AGG - Chr7:88818474-88818493 None:intergenic 30.0%
CTTATCAGCAATTGATCAAT+TGG + Chr7:88819240-88819259 MsG0780041251.01.T01:three_prime_UTR 30.0%
GCAGAAAGAACATACAATTA+AGG - Chr7:88817320-88817339 None:intergenic 30.0%
GTAAGAAAGCAACATAATTC+AGG + Chr7:88817251-88817270 MsG0780041251.01.T01:intron 30.0%
TACATTCATCATTCTTCTGA+TGG + Chr7:88816564-88816583 MsG0780041251.01.T01:intron 30.0%
TATCAGCAATTGATCAATTG+GGG + Chr7:88819242-88819261 MsG0780041251.01.T01:three_prime_UTR 30.0%
TGTGATTATGAGTATGTTGA+TGG + Chr7:88818522-88818541 MsG0780041251.01.T01:intron 30.0%
! AACTATGTTACTTGGTTGTT+TGG + Chr7:88818598-88818617 MsG0780041251.01.T01:intron 30.0%
! AAGCAAGTAATAGCGTTTTA+GGG + Chr7:88816880-88816899 MsG0780041251.01.T01:intron 30.0%
! ACCTTGTTTACCAAGTTTAT+GGG + Chr7:88816342-88816361 MsG0780041251.01.T01:intron 30.0%
! CTTGATTGACTTTCATTTCT+TGG + Chr7:88818559-88818578 MsG0780041251.01.T01:intron 30.0%
! TAATTCAGGTTACAAACACA+AGG + Chr7:88817265-88817284 MsG0780041251.01.T01:intron 30.0%
!! ATCTATCTTGGTTTTTGTCA+AGG - Chr7:88816798-88816817 None:intergenic 30.0%
!! ATTTGAATAAAGAAGTACCG+AGG - Chr7:88816995-88817014 None:intergenic 30.0%
!! GAATGATGAATGTATTTTGG+TGG - Chr7:88816558-88816577 None:intergenic 30.0%
!! TGCAAGTTTTATATTTGCCA+TGG + Chr7:88819181-88819200 MsG0780041251.01.T01:three_prime_UTR 30.0%
!! TTATGTTGCTTTCTTACAGA+TGG - Chr7:88817248-88817267 None:intergenic 30.0%
!!! AAGTCGCATTGTTTTTAATG+CGG + Chr7:88817450-88817469 MsG0780041251.01.T01:intron 30.0%
!!! ATGATGAATGTATTTTGGTG+GGG - Chr7:88816556-88816575 None:intergenic 30.0%
!!! CATGGGTTTTAAGGATTTAT+TGG - Chr7:88816458-88816477 None:intergenic 30.0%
!!! CTCACGAGCATTTTTTTTAA+CGG - Chr7:88817912-88817931 None:intergenic 30.0%
!!! TGCCATAATGCTATTTTGTA+TGG + Chr7:88819072-88819091 MsG0780041251.01.T01:three_prime_UTR 30.0%
AAAGGATTAAGGAACATCTC+GGG + Chr7:88818212-88818231 MsG0780041251.01.T01:CDS 35.0%
AAGCAGTATGTGATGTTACA+TGG + Chr7:88816301-88816320 MsG0780041251.01.T01:intron 35.0%
AGATGCTTCAATGAAAAGAG+CGG - Chr7:88818446-88818465 None:intergenic 35.0%
AGCAGTATGTGATGTTACAT+GGG + Chr7:88816302-88816321 MsG0780041251.01.T01:intron 35.0%
ATACATTGCTGATGAAACCA+TGG - Chr7:88818919-88818938 None:intergenic 35.0%
ATCAGCAATTGATCAATTGG+GGG + Chr7:88819243-88819262 MsG0780041251.01.T01:three_prime_UTR 35.0%
ATGGATGTAACGAACAATGT+AGG + Chr7:88816583-88816602 MsG0780041251.01.T01:intron 35.0%
ATTGTAACTTTCATAGCCTC+CGG - Chr7:88818967-88818986 None:intergenic 35.0%
CAAAGGATTAAGGAACATCT+CGG + Chr7:88818211-88818230 MsG0780041251.01.T01:CDS 35.0%
CATAAACTTGGTAAACAAGG+TGG - Chr7:88816343-88816362 None:intergenic 35.0%
CATACTCATAATCACATTCG+AGG - Chr7:88818518-88818537 None:intergenic 35.0%
TAACATCACATACTGCTTTC+AGG - Chr7:88816299-88816318 None:intergenic 35.0%
TACATTGCTGATGAAACCAT+GGG - Chr7:88818918-88818937 None:intergenic 35.0%
TCGAATTCATCATCACTGAT+CGG + Chr7:88816924-88816943 MsG0780041251.01.T01:intron 35.0%
TGGCTATGCACAAAATACAT+GGG - Chr7:88816483-88816502 None:intergenic 35.0%
TTATATTTGCCATGGTCCAT+GGG + Chr7:88819189-88819208 MsG0780041251.01.T01:three_prime_UTR 35.0%
TTGGAATGTAGTTTCTCAAG+CGG + Chr7:88819313-88819332 MsG0780041251.01.T01:three_prime_UTR 35.0%
TTGGCTATGCACAAAATACA+TGG - Chr7:88816484-88816503 None:intergenic 35.0%
TTGGTTGTCTTGGGAAAAAT+TGG - Chr7:88816503-88816522 None:intergenic 35.0%
TTGTATGTTCTTTCTGCTAG+TGG + Chr7:88817323-88817342 MsG0780041251.01.T01:intron 35.0%
TTTATATTTGCCATGGTCCA+TGG + Chr7:88819188-88819207 MsG0780041251.01.T01:three_prime_UTR 35.0%
TTTGTTGCTCTTCAAATTGC+AGG - Chr7:88818174-88818193 None:intergenic 35.0%
TTTGTTTGACCAGGTACTAA+GGG - Chr7:88818813-88818832 None:intergenic 35.0%
! AACTAGTTGCTTTGTTCATG+TGG + Chr7:88818706-88818725 MsG0780041251.01.T01:intron 35.0%
! AGCAAGTAATAGCGTTTTAG+GGG + Chr7:88816881-88816900 MsG0780041251.01.T01:intron 35.0%
! CAAGCAAGTAATAGCGTTTT+AGG + Chr7:88816879-88816898 MsG0780041251.01.T01:intron 35.0%
! CACCTTGTTTACCAAGTTTA+TGG + Chr7:88816341-88816360 MsG0780041251.01.T01:intron 35.0%
! CCTTGTTTACCAAGTTTATG+GGG + Chr7:88816343-88816362 MsG0780041251.01.T01:intron 35.0%
! CTGATAAGCTAGCTTATAGT+GGG + Chr7:88817589-88817608 MsG0780041251.01.T01:intron 35.0%
! GAAGGCTTCTAAGAATTGTT+TGG + Chr7:88816085-88816104 MsG0780041251.01.T01:intron 35.0%
! GTTACAAACACAAGGTACTA+TGG + Chr7:88817273-88817292 MsG0780041251.01.T01:intron 35.0%
! TGTAGCTTTTAATCCCATGA+TGG + Chr7:88818261-88818280 MsG0780041251.01.T01:CDS 35.0%
! TGTGACTAACAACCTTTTCA+TGG - Chr7:88817182-88817201 None:intergenic 35.0%
!! AAAAGACTCGTGTTGGTTTA+TGG + Chr7:88816259-88816278 MsG0780041251.01.T01:intron 35.0%
!! AAAGACTCGTGTTGGTTTAT+GGG + Chr7:88816260-88816279 MsG0780041251.01.T01:intron 35.0%
!! CTTATTCTTGCTGTTTCCTA+TGG + Chr7:88819112-88819131 MsG0780041251.01.T01:three_prime_UTR 35.0%
!!! CATCTTTTAAGGCAAATGTG+AGG + Chr7:88818140-88818159 MsG0780041251.01.T01:intron 35.0%
!!! GTTAGTTTTTATGCTGGATC+TGG - Chr7:88817383-88817402 None:intergenic 35.0%
!!! TATCCTGACACAGTTTTGTT+TGG - Chr7:88818008-88818027 None:intergenic 35.0%
AAATAGCATTATGGCAGACC+AGG - Chr7:88819068-88819087 None:intergenic 40.0%
AACTCATCAGCATTGTCAAC+CGG + Chr7:88818945-88818964 MsG0780041251.01.T01:CDS 40.0%
AAGCAGTATGGGATGTTACA+TGG + Chr7:88816383-88816402 MsG0780041251.01.T01:intron 40.0%
ACATTGCTGATGAAACCATG+GGG - Chr7:88818917-88818936 None:intergenic 40.0%
ACCCACGATTCTGTAAGTTT+AGG + Chr7:88817114-88817133 MsG0780041251.01.T01:intron 40.0%
ACCCTAAACTTACAGAATCG+TGG - Chr7:88817119-88817138 None:intergenic 40.0%
AGATATAATCGCAACTCCCA+TGG - Chr7:88819208-88819227 None:intergenic 40.0%
AGCAGTATGGGATGTTACAT+GGG + Chr7:88816384-88816403 MsG0780041251.01.T01:intron 40.0%
AGTAGTAGCTGCAAATTGGA+AGG - Chr7:88817071-88817090 None:intergenic 40.0%
CATAAGAAGGTCTTGGGTTT+GGG + Chr7:88817349-88817368 MsG0780041251.01.T01:intron 40.0%
CATCGCGGTTTGAATTGTAA+TGG - Chr7:88816972-88816991 None:intergenic 40.0%
CATGGAGGTCCAAATGATAT+AGG - Chr7:88816532-88816551 None:intergenic 40.0%
CCCACGATTCTGTAAGTTTA+GGG + Chr7:88817115-88817134 MsG0780041251.01.T01:intron 40.0%
CCCCATAAACTTGGTAAACA+AGG - Chr7:88816346-88816365 None:intergenic 40.0%
CCCTAAACTTACAGAATCGT+GGG - Chr7:88817118-88817137 None:intergenic 40.0%
CTTTGTTCATGTGGTGTAAC+TGG + Chr7:88818715-88818734 MsG0780041251.01.T01:intron 40.0%
GACTATCCTGAAAGCAGTAT+GGG + Chr7:88816372-88816391 MsG0780041251.01.T01:intron 40.0%
GAGAGATGAGAATTCAGAGT+TGG - Chr7:88817504-88817523 None:intergenic 40.0%
GCTATGCACAAAATACATGG+GGG - Chr7:88816481-88816500 None:intergenic 40.0%
GCTTAACTGTGGAGTTCTTA+TGG - Chr7:88816156-88816175 None:intergenic 40.0%
GGAGAATATTATTCTGCACC+TGG + Chr7:88818756-88818775 MsG0780041251.01.T01:intron 40.0%
GGATGTGAGGAAAAGTTGTA+CGG + Chr7:88819339-88819358 MsG0780041251.01.T01:three_prime_UTR 40.0%
GGCTATGCACAAAATACATG+GGG - Chr7:88816482-88816501 None:intergenic 40.0%
GTTTGTTTGACCAGGTACTA+AGG - Chr7:88818814-88818833 None:intergenic 40.0%
TAACATCCCATACTGCTTTC+AGG - Chr7:88816381-88816400 None:intergenic 40.0%
TCATAAGAAGGTCTTGGGTT+TGG + Chr7:88817348-88817367 MsG0780041251.01.T01:intron 40.0%
TTAATCCCATGATGGCTCAA+AGG + Chr7:88818269-88818288 MsG0780041251.01.T01:CDS 40.0%
TTACCGGAAAACTTCCCAAT+AGG - Chr7:88816212-88816231 None:intergenic 40.0%
TTGCCAAACAAAACTGTGTC+AGG + Chr7:88818002-88818021 MsG0780041251.01.T01:intron 40.0%
! ACGCTATTACTTGCTTGCTA+TGG - Chr7:88816876-88816895 None:intergenic 40.0%
! AGGCATTCATTGGTTGTCTT+GGG - Chr7:88816512-88816531 None:intergenic 40.0%
! CATCTTGTTGTCGATAGTCA+CGG - Chr7:88818043-88818062 None:intergenic 40.0%
! GCTGATAAGCTAGCTTATAG+TGG + Chr7:88817588-88817607 MsG0780041251.01.T01:intron 40.0%
! TAGGCATTCATTGGTTGTCT+TGG - Chr7:88816513-88816532 None:intergenic 40.0%
! TGACCTATTGGGAAGTTTTC+CGG + Chr7:88816206-88816225 MsG0780041251.01.T01:intron 40.0%
! TTTGGGATGAGTGACCTATT+GGG + Chr7:88816195-88816214 MsG0780041251.01.T01:intron 40.0%
!! AAGACTCGTGTTGGTTTATG+GGG + Chr7:88816261-88816280 MsG0780041251.01.T01:intron 40.0%
!! TGGTGTCATAAGAAGGTCTT+GGG + Chr7:88817343-88817362 MsG0780041251.01.T01:intron 40.0%
!! TTGCTGTTTCCTATGGTAAC+TGG + Chr7:88819119-88819138 MsG0780041251.01.T01:three_prime_UTR 40.0%
!!! AATGTATTTTGGTGGGGTCA+TGG - Chr7:88816550-88816569 None:intergenic 40.0%
!!! GCTTGACTTGGAGCAATTTT+GGG + Chr7:88816178-88816197 MsG0780041251.01.T01:intron 40.0%
!!! TGCTTGACTTGGAGCAATTT+TGG + Chr7:88816177-88816196 MsG0780041251.01.T01:intron 40.0%
!!! TTTTGGGATGAGTGACCTAT+TGG + Chr7:88816194-88816213 MsG0780041251.01.T01:intron 40.0%
AACAAGGTGGAAGCTGCAAA+CGG - Chr7:88816330-88816349 None:intergenic 45.0%
AACACACAACCACCATCAAC+CGG + Chr7:88818990-88819009 MsG0780041251.01.T01:CDS 45.0%
AAGTCAAGCACGCTTAACTG+TGG - Chr7:88816167-88816186 None:intergenic 45.0%
ACAGTTAAGCGTGCTTGACT+TGG + Chr7:88816166-88816185 MsG0780041251.01.T01:intron 45.0%
ATCATCATAGGTCTCATCCC+TGG - Chr7:88818373-88818392 None:intergenic 45.0%
ATCCTAAGGCTGTGTAGGTA+TGG + Chr7:88816046-88816065 MsG0780041251.01.T01:intron 45.0%
ATGTAGTTTCTCAAGCGGCA+TGG + Chr7:88819318-88819337 MsG0780041251.01.T01:three_prime_UTR 45.0%
ATTGCTGATGAAACCATGGG+GGG - Chr7:88818915-88818934 None:intergenic 45.0%
CATTGCTGATGAAACCATGG+GGG - Chr7:88818916-88818935 None:intergenic 45.0%
CCTCTCATTCCGATGTGATT+CGG - Chr7:88816025-88816044 None:intergenic 45.0%
CCTGAGGGAAATAACTAACC+TGG + Chr7:88819047-88819066 MsG0780041251.01.T01:exon 45.0%
CGAATCACATCGGAATGAGA+GGG + Chr7:88816023-88816042 MsG0780041251.01.T01:CDS 45.0%
CGACTATCCTGAAAGCAGTA+TGG + Chr7:88816371-88816390 MsG0780041251.01.T01:intron 45.0%
CTAGAGGAACCGAATCACAT+CGG + Chr7:88816013-88816032 MsG0780041251.01.T01:CDS 45.0%
GGTTGACAATGCTGATGAGT+TGG - Chr7:88818946-88818965 None:intergenic 45.0%
GTATGGGACTACATGGTTGA+AGG + Chr7:88816063-88816082 MsG0780041251.01.T01:intron 45.0%
GTCAAACAAACACCCTTCCT+AGG + Chr7:88818823-88818842 MsG0780041251.01.T01:CDS 45.0%
GTGGACAACAACTATTCCCA+GGG + Chr7:88818353-88818372 MsG0780041251.01.T01:CDS 45.0%
TACAGAATCGTGGGTCAAGT+AGG - Chr7:88817109-88817128 None:intergenic 45.0%
TCATCATAGGTCTCATCCCT+GGG - Chr7:88818372-88818391 None:intergenic 45.0%
TCCTAAGGCTGTGTAGGTAT+GGG + Chr7:88816047-88816066 MsG0780041251.01.T01:intron 45.0%
TCGCAGTAGTAGCTGCAAAT+TGG - Chr7:88817075-88817094 None:intergenic 45.0%
TGATGCTTGAACATGAGCAC+AGG - Chr7:88818684-88818703 None:intergenic 45.0%
TGGTAGAGATGGTATCTACC+TGG - Chr7:88818418-88818437 None:intergenic 45.0%
TGGTATCTACCTGGTGCAAT+AGG - Chr7:88818409-88818428 None:intergenic 45.0%
TGTGTAGGTATGGGACTACA+TGG + Chr7:88816056-88816075 MsG0780041251.01.T01:intron 45.0%
TTCCTATGGTAACTGGCAGA+GGG + Chr7:88819126-88819145 MsG0780041251.01.T01:three_prime_UTR 45.0%
TTTCCTATGGTAACTGGCAG+AGG + Chr7:88819125-88819144 MsG0780041251.01.T01:three_prime_UTR 45.0%
! CACAAAATACATGGGGGCAT+GGG - Chr7:88816475-88816494 None:intergenic 45.0%
! CCAGGTTAGTTATTTCCCTC+AGG - Chr7:88819050-88819069 None:intergenic 45.0%
! GGATTTTATCTCGCCATGCT+TGG - Chr7:88816437-88816456 None:intergenic 45.0%
! GGTTAGTTATTTCCCTCAGG+TGG - Chr7:88819047-88819066 None:intergenic 45.0%
! GTGGTGTAACTGGTTTCGTT+TGG + Chr7:88818725-88818744 MsG0780041251.01.T01:intron 45.0%
! TCCACCTTGTTTACCAAGCA+TGG + Chr7:88816421-88816440 MsG0780041251.01.T01:intron 45.0%
! TCGGTTCCTCTAGAAACTGT+CGG - Chr7:88816006-88816025 None:intergenic 45.0%
! TGAGACCTATGATGATGCCT+AGG + Chr7:88818377-88818396 MsG0780041251.01.T01:CDS 45.0%
! TGGTTTCGTTTGGAATGCAC+AGG + Chr7:88818735-88818754 MsG0780041251.01.T01:intron 45.0%
!! ACTTGCTTGCTATGGTGTAG+TGG - Chr7:88816868-88816887 None:intergenic 45.0%
!! CTGCTAGTGGTGTCATAAGA+AGG + Chr7:88817336-88817355 MsG0780041251.01.T01:intron 45.0%
!! CTTGCTTGCTATGGTGTAGT+GGG - Chr7:88816867-88816886 None:intergenic 45.0%
!! GTGGTGTCATAAGAAGGTCT+TGG + Chr7:88817342-88817361 MsG0780041251.01.T01:intron 45.0%
!! TTGCTTGCTATGGTGTAGTG+GGG - Chr7:88816866-88816885 None:intergenic 45.0%
!!! TTAAATTAATCAATTTTTAT+CGG + Chr7:88816667-88816686 MsG0780041251.01.T01:intron 5.0%
ACGAACCAAGCGAAAACTGG+TGG + Chr7:88815906-88815925 MsG0780041251.01.T01:CDS 50.0%
AGAAGGCCTTTGAGCCATCA+TGG - Chr7:88818278-88818297 None:intergenic 50.0%
AGAGCAGACCTCTCCTAGTA+CGG + Chr7:88815871-88815890 MsG0780041251.01.T01:CDS 50.0%
AGTTGTTGTCCACCAAAGCC+TGG - Chr7:88818346-88818365 None:intergenic 50.0%
CAATGAAAAGAGCGGACGAG+TGG - Chr7:88818438-88818457 None:intergenic 50.0%
CAATTCAAACCGCGATGCCT+CGG + Chr7:88816975-88816994 MsG0780041251.01.T01:intron 50.0%
CACGCTGAAAAGACTCGTGT+TGG + Chr7:88816252-88816271 MsG0780041251.01.T01:intron 50.0%
CCGAATCACATCGGAATGAG+AGG + Chr7:88816022-88816041 MsG0780041251.01.T01:CDS 50.0%
CCTGGAACACTTCCAGGAAT+TGG - Chr7:88818328-88818347 None:intergenic 50.0%
CGAACCAAGCGAAAACTGGT+GGG + Chr7:88815907-88815926 MsG0780041251.01.T01:CDS 50.0%
CTCGCCATGCTTGGTAAACA+AGG - Chr7:88816428-88816447 None:intergenic 50.0%
CTTCCAGGAATTGGCAACCT+TGG - Chr7:88818319-88818338 None:intergenic 50.0%
CTTTCATAGCCTCCGGTTGA+TGG - Chr7:88818960-88818979 None:intergenic 50.0%
GAAGGCCTTTGAGCCATCAT+GGG - Chr7:88818277-88818296 None:intergenic 50.0%
GCACAAAATACATGGGGGCA+TGG - Chr7:88816476-88816495 None:intergenic 50.0%
GCAGTGTTTCCAGGAACCAT+CGG - Chr7:88818870-88818889 None:intergenic 50.0%
GCCATGCTTGGTAAACAAGG+TGG - Chr7:88816425-88816444 None:intergenic 50.0%
GGGACTACATGGTTGAAGGA+AGG + Chr7:88816067-88816086 MsG0780041251.01.T01:intron 50.0%
GGTGGACAACAACTATTCCC+AGG + Chr7:88818352-88818371 MsG0780041251.01.T01:CDS 50.0%
GTCGACTGACCCCATAAACT+TGG - Chr7:88816355-88816374 None:intergenic 50.0%
TCATCAGCATTGTCAACCGG+AGG + Chr7:88818948-88818967 MsG0780041251.01.T01:CDS 50.0%
TCCCATACCTACACAGCCTT+AGG - Chr7:88816051-88816070 None:intergenic 50.0%
TCGGAATGAGAGGGATCCTA+AGG + Chr7:88816032-88816051 MsG0780041251.01.T01:CDS 50.0%
TCTCCTAGTACGGTGTGGTT+CGG + Chr7:88815881-88815900 MsG0780041251.01.T01:CDS 50.0%
! CGGTTCCTCTAGAAACTGTC+GGG - Chr7:88816005-88816024 None:intergenic 50.0%
! GACAATGCTGATGAGTTGGC+TGG - Chr7:88818942-88818961 None:intergenic 50.0%
! TATGCCCACCAGTTTTCGCT+TGG - Chr7:88815914-88815933 None:intergenic 50.0%
!! AAAGAAGTACCGAGGCATCG+CGG - Chr7:88816987-88817006 None:intergenic 50.0%
!! AACCTTGGTGGTGGCAAGAT+GGG - Chr7:88818304-88818323 None:intergenic 50.0%
!! ACATGGGGGCATGGGTTTTA+AGG - Chr7:88816467-88816486 None:intergenic 50.0%
!! CCAATTCCTGGAAGTGTTCC+AGG + Chr7:88818325-88818344 MsG0780041251.01.T01:CDS 50.0%
!! GGAAGGGTGTTTGTTTGACC+AGG - Chr7:88818822-88818841 None:intergenic 50.0%
!! GGTTGATGGTGGTTGTGTGT+TGG - Chr7:88818991-88819010 None:intergenic 50.0%
!! TGCTTGCTATGGTGTAGTGG+GGG - Chr7:88816865-88816884 None:intergenic 50.0%
!!! GTATTTTGGTGGGGTCATGG+AGG - Chr7:88816547-88816566 None:intergenic 50.0%
ACACAACCACCATCAACCGG+AGG + Chr7:88818993-88819012 MsG0780041251.01.T01:CDS 55.0%
ACTGATCGGTCAGCTCTCGA+AGG + Chr7:88816938-88816957 MsG0780041251.01.T01:intron 55.0%
AGACCTCTCCTAGTACGGTG+TGG + Chr7:88815876-88815895 MsG0780041251.01.T01:CDS 55.0%
ATCGCAACTCCCATGGACCA+TGG - Chr7:88819201-88819220 None:intergenic 55.0%
CATTGTCGTGCCTTGTGCAC+TGG - Chr7:88815975-88815994 None:intergenic 55.0%
CCAAAGCCTGGAACACTTCC+AGG - Chr7:88818334-88818353 None:intergenic 55.0%
CCACCAACTTTACCTCCACC+TGG + Chr7:88818783-88818802 MsG0780041251.01.T01:CDS 55.0%
CCACCAAGGTTGCCAATTCC+TGG + Chr7:88818313-88818332 MsG0780041251.01.T01:CDS 55.0%
CCAGGAATTGGCAACCTTGG+TGG - Chr7:88818316-88818335 None:intergenic 55.0%
CCAGGTGGAGGTAAAGTTGG+TGG - Chr7:88818786-88818805 None:intergenic 55.0%
CCTGGCCTAGGCATCATCAT+AGG - Chr7:88818385-88818404 None:intergenic 55.0%
CTACCTGGTGCAATAGGACC+TGG - Chr7:88818403-88818422 None:intergenic 55.0%
CTCCCTCTGCCAGTTACCAT+AGG - Chr7:88819131-88819150 None:intergenic 55.0%
CTCCTAGTACGGTGTGGTTC+GGG + Chr7:88815882-88815901 MsG0780041251.01.T01:CDS 55.0%
GAACCACACCGTACTAGGAG+AGG - Chr7:88815882-88815901 None:intergenic 55.0%
GAGGGATCCTAAGGCTGTGT+AGG + Chr7:88816041-88816060 MsG0780041251.01.T01:CDS 55.0%
GCACAAGGCACGACAATGAG+CGG + Chr7:88815977-88815996 MsG0780041251.01.T01:CDS 55.0%
GCACCAGGTGGAGGTAAAGT+TGG - Chr7:88818789-88818808 None:intergenic 55.0%
GCCAACACTCAACCACCTGA+GGG + Chr7:88819032-88819051 MsG0780041251.01.T01:CDS 55.0%
GCTGCAGCGTTTCAGCAAGT+TGG + Chr7:88818238-88818257 MsG0780041251.01.T01:CDS 55.0%
GGAATTGGCAACCTTGGTGG+TGG - Chr7:88818313-88818332 None:intergenic 55.0%
GGGACGAACCAAGCGAAAAC+TGG + Chr7:88815903-88815922 MsG0780041251.01.T01:CDS 55.0%
GGTGGCAAGATGGGCATAGA+AGG - Chr7:88818295-88818314 None:intergenic 55.0%
GTGTTTCCAGGAACCATCGG+CGG - Chr7:88818867-88818886 None:intergenic 55.0%
TCCCTCAGGTGGTTGAGTGT+TGG - Chr7:88819036-88819055 None:intergenic 55.0%
TCCTAGTACGGTGTGGTTCG+GGG + Chr7:88815883-88815902 MsG0780041251.01.T01:CDS 55.0%
TCTCAAGCGGCATGGATGTG+AGG + Chr7:88819326-88819345 MsG0780041251.01.T01:three_prime_UTR 55.0%
TGCCAACACTCAACCACCTG+AGG + Chr7:88819031-88819050 MsG0780041251.01.T01:CDS 55.0%
TGTAACACCCACCGTTGACG+AGG + Chr7:88815934-88815953 MsG0780041251.01.T01:CDS 55.0%
! CCTATGATGATGCCTAGGCC+AGG + Chr7:88818382-88818401 MsG0780041251.01.T01:CDS 55.0%
!! CAACCTTGGTGGTGGCAAGA+TGG - Chr7:88818305-88818324 None:intergenic 55.0%
!! CCTGGAAGTGTTCCAGGCTT+TGG + Chr7:88818331-88818350 MsG0780041251.01.T01:CDS 55.0%
!! GGAAGTGTTCCAGGCTTTGG+TGG + Chr7:88818334-88818353 MsG0780041251.01.T01:CDS 55.0%
!! GGTAAAGTTGGTGGCATGCC+AGG - Chr7:88818777-88818796 None:intergenic 55.0%
!! TCATAGCCTCCGGTTGATGG+TGG - Chr7:88819002-88819021 None:intergenic 55.0%
ACCCACCGTTGACGAGGACA+GGG + Chr7:88815940-88815959 MsG0780041251.01.T01:CDS 60.0%
ACTGCAGCACCAGCCTCCAA+TGG + Chr7:88818885-88818904 MsG0780041251.01.T01:CDS 60.0%
AGGCCAGGTCCTATTGCACC+AGG + Chr7:88818397-88818416 MsG0780041251.01.T01:CDS 60.0%
ATCGGCGGTGGAGGTAGTGT+CGG - Chr7:88818852-88818871 None:intergenic 60.0%
CACTCCCCTGTCCTCGTCAA+CGG - Chr7:88815948-88815967 None:intergenic 60.0%
CCTGGTGCTCCCTTAGTACC+TGG + Chr7:88818801-88818820 MsG0780041251.01.T01:CDS 60.0%
CGGTCAGCTCTCGAAGGAGA+AGG + Chr7:88816944-88816963 MsG0780041251.01.T01:intron 60.0%
GAGCGGACGAGTGGTAGAGA+TGG - Chr7:88818429-88818448 None:intergenic 60.0%
GGTGCAATAGGACCTGGCCT+AGG - Chr7:88818397-88818416 None:intergenic 60.0%
GTCCTCACTCGCACGCTTAC+CGG - Chr7:88816228-88816247 None:intergenic 60.0%
TCCCCGAACCACACCGTACT+AGG - Chr7:88815887-88815906 None:intergenic 60.0%
TGCCCATCTTGCCACCACCA+AGG + Chr7:88818299-88818318 MsG0780041251.01.T01:CDS 60.0%
TTCCGGTAAGCGTGCGAGTG+AGG + Chr7:88816223-88816242 MsG0780041251.01.T01:intron 60.0%
TTTCCAGGAACCATCGGCGG+TGG - Chr7:88818864-88818883 None:intergenic 60.0%
! CGGCTCCCGACAGTTTCTAG+AGG + Chr7:88815997-88816016 MsG0780041251.01.T01:CDS 60.0%
!! ACTAAGGGAGCACCAGGTGG+AGG - Chr7:88818798-88818817 None:intergenic 60.0%
!! CCAGGTACTAAGGGAGCACC+AGG - Chr7:88818804-88818823 None:intergenic 60.0%
!! GCTGGTGCTGCAGTGTTTCC+AGG - Chr7:88818879-88818898 None:intergenic 60.0%
!! GGTACTAAGGGAGCACCAGG+TGG - Chr7:88818801-88818820 None:intergenic 60.0%
!! TAGTGTCGGCGGCCTAGGAA+GGG - Chr7:88818838-88818857 None:intergenic 60.0%
CACCCACCGTTGACGAGGAC+AGG + Chr7:88815939-88815958 MsG0780041251.01.T01:CDS 65.0%
CCCACCGTTGACGAGGACAG+GGG + Chr7:88815941-88815960 MsG0780041251.01.T01:CDS 65.0%
CCCCTGTCCTCGTCAACGGT+GGG - Chr7:88815944-88815963 None:intergenic 65.0%
CGTTGACGAGGACAGGGGAG+TGG + Chr7:88815946-88815965 MsG0780041251.01.T01:CDS 65.0%
GACACTACCTCCACCGCCGA+TGG + Chr7:88818851-88818870 MsG0780041251.01.T01:CDS 65.0%
GGAGTGGTCGCCAGTGCACA+AGG + Chr7:88815962-88815981 MsG0780041251.01.T01:CDS 65.0%
TCCCCTGTCCTCGTCAACGG+TGG - Chr7:88815945-88815964 None:intergenic 65.0%
!! AACCATGGGGGGAGCGCCAT+TGG - Chr7:88818904-88818923 None:intergenic 65.0%
!! GTAGTGTCGGCGGCCTAGGA+AGG - Chr7:88818839-88818858 None:intergenic 65.0%
CCAGGAACCATCGGCGGTGG+AGG - Chr7:88818861-88818880 None:intergenic 70.0%
CCTCCACCGCCGATGGTTCC+TGG + Chr7:88818858-88818877 MsG0780041251.01.T01:CDS 70.0%
CTCCAATGGCGCTCCCCCCA+TGG + Chr7:88818899-88818918 MsG0780041251.01.T01:CDS 70.0%
! GGCGGTGGAGGTAGTGTCGG+CGG - Chr7:88818849-88818868 None:intergenic 70.0%
!! CATGGGGGGAGCGCCATTGG+AGG - Chr7:88818901-88818920 None:intergenic 70.0%
!! GGAGGTAGTGTCGGCGGCCT+AGG - Chr7:88818843-88818862 None:intergenic 70.0%
!! GGGGGAGCGCCATTGGAGGC+TGG - Chr7:88818897-88818916 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 88815863 88819395 88815863 ID=MsG0780041251.01;Name=MsG0780041251.01
Chr7 mRNA 88815863 88819395 88815863 ID=MsG0780041251.01.T01;Parent=MsG0780041251.01;Name=MsG0780041251.01.T01;_AED=0.47;_eAED=0.56;_QI=0|0.33|0.75|1|1|1|4|331|272
Chr7 exon 88815863 88816062 88815863 ID=MsG0780041251.01.T01:exon:3397;Parent=MsG0780041251.01.T01
Chr7 exon 88817083 88817125 88817083 ID=MsG0780041251.01.T01:exon:3398;Parent=MsG0780041251.01.T01
Chr7 exon 88818151 88818418 88818151 ID=MsG0780041251.01.T01:exon:3399;Parent=MsG0780041251.01.T01
Chr7 exon 88818757 88819395 88818757 ID=MsG0780041251.01.T01:exon:3400;Parent=MsG0780041251.01.T01
Chr7 CDS 88815863 88816062 88815863 ID=MsG0780041251.01.T01:cds;Parent=MsG0780041251.01.T01
Chr7 CDS 88817083 88817125 88817083 ID=MsG0780041251.01.T01:cds;Parent=MsG0780041251.01.T01
Chr7 CDS 88818151 88818418 88818151 ID=MsG0780041251.01.T01:cds;Parent=MsG0780041251.01.T01
Chr7 CDS 88818757 88819064 88818757 ID=MsG0780041251.01.T01:cds;Parent=MsG0780041251.01.T01
Chr7 three_prime_UTR 88819065 88819395 88819065 ID=MsG0780041251.01.T01:three_prime_utr;Parent=MsG0780041251.01.T01
Gene Sequence

>MsG0780041251.01.T01

ATGGTATCAGAGCAGACCTCTCCTAGTACGGTGTGGTTCGGGGACGAACCAAGCGAAAACTGGTGGGCATATGTAACACCCACCGTTGACGAGGACAGGGGAGTGGTCGCCAGTGCACAAGGCACGACAATGAGCGGCTCCCGACAGTTTCTAGAGGAACCGAATCACATCGGAATGAGAGGGATCCTAAGGCTGTGTAGCTACTACTGCGACTACTGCGATACCTACTTGACCCACGATTCTGCAAATGTGAGGCAATACTACCTGCAATTTGAAGAGCAACAAACCCAAAGTTTAATTGATCAAAGGATTAAGGAACATCTCGGGCAAGCTGCAGCGTTTCAGCAAGTTGGTGTAGCTTTTAATCCCATGATGGCTCAAAGGCCTTCTATGCCCATCTTGCCACCACCAAGGTTGCCAATTCCTGGAAGTGTTCCAGGCTTTGGTGGACAACAACTATTCCCAGGGATGAGACCTATGATGATGCCTAGGCCAGGTCCTATTGCACCAGGAGAATATTATTCTGCACCTGGCATGCCACCAACTTTACCTCCACCTGGTGCTCCCTTAGTACCTGGTCAAACAAACACCCTTCCTAGGCCGCCGACACTACCTCCACCGCCGATGGTTCCTGGAAACACTGCAGCACCAGCCTCCAATGGCGCTCCCCCCATGGTTTCATCAGCAATGTATCCAGCCAACTCATCAGCATTGTCAACCGGAGGCTATGAAAGTTACAATGCCAACACACAACCACCATCAACCGGAGGCTATGAAAGTTACAATGCCAACACTCAACCACCTGAGGGAAATAACTAA
Protein sequence

>MsG0780041251.01.T01

MVSEQTSPSTVWFGDEPSENWWAYVTPTVDEDRGVVASAQGTTMSGSRQFLEEPNHIGMRGILRLCSYYCDYCDTYLTHDSANVRQYYLQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAFNPMMAQRPSMPILPPPRLPIPGSVPGFGGQQLFPGMRPMMMPRPGPIAPGEYYSAPGMPPTLPPPGAPLVPGQTNTLPRPPTLPPPPMVPGNTAAPASNGAPPMVSSAMYPANSSALSTGGYESYNANTQPPSTGGYESYNANTQPPEGNN*