AlfalfaGEDB | MsG0880045769.01

M. sativa cultivar ZhongmuNo.1 / MsG0880045769.01

KEGG: K02144
GO: GO:0000221 GO:0005488 GO:0015991
PFAM: PF03224 PF11698

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045769.01.T01	XP_004509230.1	54.325	289	47	4	8	261	133	371	5.18E-83	266

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045769.01.T01	Q9LX65	47.692	260	51	4	37	261	151	360	3.99E-62	205

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045769.01.T01	A0A1S2YSK4	54.325	289	47	4	8	261	133	371	2.47e-83	266

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000741.01	MsG0880045769.01	0.806579	7.681665e-50	4.184326e-47
MsG0180002074.01	MsG0880045769.01	0.814681	1.361201e-51	9.193564e-49
MsG0880044546.01	MsG0880045769.01	0.823623	1.253545e-53	1.085059e-50
MsG0880045165.01	MsG0880045769.01	0.802505	5.435672e-49	2.667167e-46
MsG0880045769.01	MsG0880046047.01	0.809717	1.647894e-50	9.747592e-48
MsG0880045769.01	MsG0880046684.01	0.802343	5.867706e-49	2.867436e-46
MsG0880045769.01	MsG0880047289.01	0.802627	5.129346e-49	2.524707e-46
MsG0880045769.01	MsG0880047328.01	-0.831752	1.397126e-55	1.530474e-52
MsG0880045769.01	MsG0880047353.01	0.845189	4.743247e-59	7.841177e-56
MsG0180003181.01	MsG0880045769.01	0.861355	1.087351e-63	3.068424e-60
MsG0180003303.01	MsG0880045769.01	0.848822	4.796208e-60	8.912429e-57
MsG0180003744.01	MsG0880045769.01	0.811143	8.112080e-51	4.982495e-48
MsG0180003799.01	MsG0880045769.01	0.830694	2.542591e-55	2.699126e-52
MsG0180004139.01	MsG0880045769.01	0.800254	1.571118e-48	7.281455e-46
MsG0180004437.01	MsG0880045769.01	0.851827	6.884473e-61	1.410880e-57
MsG0180004444.01	MsG0880045769.01	0.826181	3.123072e-54	2.907564e-51
MsG0180004598.01	MsG0880045769.01	0.811768	5.935291e-51	3.706064e-48
MsG0180005026.01	MsG0880045769.01	0.815196	1.046319e-51	7.165680e-49
MsG0180005304.01	MsG0880045769.01	0.800935	1.140991e-48	5.380389e-46
MsG0180006050.01	MsG0880045769.01	0.800241	1.580417e-48	7.322046e-46
MsG0280006367.01	MsG0880045769.01	0.811260	7.653980e-51	4.715578e-48
MsG0780040687.01	MsG0880045769.01	0.829139	6.082951e-55	6.171236e-52
MsG0780040742.01	MsG0880045769.01	0.807148	5.822513e-50	3.218628e-47
MsG0780041671.01	MsG0880045769.01	0.807651	4.555575e-50	2.551371e-47
MsG0880042329.01	MsG0880045769.01	0.804049	2.603460e-49	1.329011e-46
MsG0880043162.01	MsG0880045769.01	0.808801	2.591239e-50	1.495652e-47
MsG0880043750.01	MsG0880045769.01	0.808944	2.414320e-50	1.398875e-47
MsG0280010735.01	MsG0880045769.01	0.834992	2.174187e-56	2.623355e-53
MsG0280010866.01	MsG0880045769.01	0.821686	3.538334e-53	2.898835e-50
MsG0280011075.01	MsG0880045769.01	0.823356	1.447781e-53	1.243583e-50
MsG0280011085.01	MsG0880045769.01	0.814716	1.336939e-51	9.038407e-49
MsG0280011336.01	MsG0880045769.01	0.850796	1.346887e-60	2.669512e-57
MsG0380014576.01	MsG0880045769.01	0.842038	3.300764e-58	4.941587e-55
MsG0680031063.01	MsG0880045769.01	0.804170	2.456953e-49	1.258091e-46
MsG0480019170.01	MsG0880045769.01	0.813818	2.110998e-51	1.392854e-48
MsG0480020144.01	MsG0880045769.01	0.840381	8.996262e-58	1.279253e-54
MsG0480021216.01	MsG0880045769.01	0.844621	6.750431e-59	1.096089e-55
MsG0480021900.01	MsG0880045769.01	0.802806	4.711423e-49	2.329725e-46
MsG0480021986.01	MsG0880045769.01	0.815437	9.250896e-52	6.377889e-49
MsG0480022228.01	MsG0880045769.01	0.813200	2.887180e-51	1.873163e-48
MsG0480022552.01	MsG0880045769.01	0.800388	1.475114e-48	6.859943e-46
MsG0480022598.01	MsG0880045769.01	0.800573	1.353027e-48	6.321573e-46
MsG0480022719.01	MsG0880045769.01	0.809943	1.473776e-50	8.769245e-48
MsG0480022897.01	MsG0880045769.01	0.806294	8.820188e-50	4.769842e-47
MsG0480023387.01	MsG0880045769.01	0.806608	7.574278e-50	4.128852e-47
MsG0580024311.01	MsG0880045769.01	0.842636	2.291331e-58	3.495327e-55
MsG0580024956.01	MsG0880045769.01	0.844251	8.489967e-59	1.362506e-55
MsG0380015426.01	MsG0880045769.01	0.803267	3.783061e-49	1.892689e-46
MsG0380015607.01	MsG0880045769.01	0.832342	9.982903e-56	1.112520e-52
MsG0380015992.01	MsG0880045769.01	0.812672	3.768076e-51	2.410615e-48
MsG0380016589.01	MsG0880045769.01	0.805707	1.171999e-49	6.244031e-47
MsG0380017431.01	MsG0880045769.01	0.815430	9.280379e-52	6.397080e-49
MsG0480018332.01	MsG0880045769.01	0.823239	1.541612e-53	1.319904e-50
MsG0580029208.01	MsG0880045769.01	0.803323	3.682173e-49	1.844870e-46
MsG0580029371.01	MsG0880045769.01	0.811516	6.733125e-51	4.176545e-48
MsG0580030100.01	MsG0880045769.01	0.815029	1.139877e-51	7.771432e-49
MsG0280007011.01	MsG0880045769.01	0.824907	6.259871e-54	5.620482e-51
MsG0280007790.01	MsG0880045769.01	0.802649	5.074408e-49	2.499047e-46
MsG0280009386.01	MsG0880045769.01	0.845725	3.394281e-59	5.709818e-56
MsG0280009774.01	MsG0880045769.01	0.819861	9.300483e-53	7.242068e-50
MsG0780038040.01	MsG0880045769.01	0.800943	1.136943e-48	5.362343e-46
MsG0780039587.01	MsG0880045769.01	0.826959	2.036831e-54	1.939125e-51
MsG0780039717.01	MsG0880045769.01	0.819446	1.156825e-52	8.904054e-50
MsG0780039845.01	MsG0880045769.01	0.800261	1.565564e-48	7.257137e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045769.01.T01	MTR_8g078370	54.671	289	46	4	8	261	167	405	7.29e-86	265

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880045769.01.T01	AT3G42050	47.692	260	51	4	37	261	151	360	4.07e-63	205

Find 52 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAGCCTGCAATTGAATATT+TGG	0.152768	8:-64075623	MsG0880045769.01.T01:intron
GAAATCATGCTCTTCAAAAT+TGG	0.212649	8:+64074327	None:intergenic
ACATCATCAATACTGGTAAA+TGG	0.305918	8:+64077129	None:intergenic
AAATGTCATAAAACTATAAT+AGG	0.315228	8:-64075194	MsG0880045769.01.T01:CDS
AGCAACGCCACTCTGAGTTT+TGG	0.338877	8:+64077182	None:intergenic
CATCCACTCAACATCTATTC+AGG	0.342692	8:-64075958	MsG0880045769.01.T01:CDS
ATCTATTCAGGTAAGTTTAC+CGG	0.345839	8:-64075946	MsG0880045769.01.T01:intron
CCCTTTCTGATTGCAGTGTC+AGG	0.346730	8:-64077205	MsG0880045769.01.T01:CDS
TGGATTGGTAAAATGGCTTT+TGG	0.347116	8:-64077099	MsG0880045769.01.T01:CDS
TTGCCTTTCAACTCTACTTA+AGG	0.349983	8:-64076048	MsG0880045769.01.T01:CDS
TGCACAAAGATCCCATCTTT+TGG	0.361790	8:-64074363	MsG0880045769.01.T01:CDS
AGAAGTTCTTCTCGGCAATC+TGG	0.364797	8:-64074398	MsG0880045769.01.T01:CDS
TTGAATATTTGGCTACTTCA+AGG	0.384243	8:-64075612	MsG0880045769.01.T01:CDS
TGTTGGAGGCACTGACTCTC+TGG	0.404996	8:-64074476	MsG0880045769.01.T01:CDS
GTAGCCAAATATTCAATTGC+AGG	0.408085	8:+64075619	None:intergenic
TTCTTCTCGGCAATCTGGAT+TGG	0.439850	8:-64074393	MsG0880045769.01.T01:CDS
TACAAGCAAGAAGTTCTTCT+CGG	0.448235	8:-64074406	MsG0880045769.01.T01:CDS
AGGTATCTGTGCATTATCTC+TGG	0.455814	8:-64074303	MsG0880045769.01.T01:CDS
CTCTCTGGAAGAAGGGCTTA+AGG	0.458505	8:-64074461	MsG0880045769.01.T01:CDS
TCGTACTTTGTTCAAACTGA+TGG	0.468044	8:-64076011	MsG0880045769.01.T01:CDS
GAAAGGCAATTGATAGCAGT+TGG	0.470551	8:+64076062	None:intergenic
GGCACTGACTCTCTGGAAGA+AGG	0.472538	8:-64074469	MsG0880045769.01.T01:CDS
TAAGAGTTCTACAAAAGAAA+AGG	0.474052	8:-64075563	MsG0880045769.01.T01:intron
TACTTAAGGAACCTGTGGTC+AGG	0.484763	8:-64076034	MsG0880045769.01.T01:CDS
CCTGACACTGCAATCAGAAA+GGG	0.487433	8:+64077205	None:intergenic
TTAACAACATCAATCAGTCT+TGG	0.496128	8:+64075583	None:intergenic
CGTACTTTGTTCAAACTGAT+GGG	0.502271	8:-64076010	MsG0880045769.01.T01:CDS
GCCTGACACTGCAATCAGAA+AGG	0.504433	8:+64077204	None:intergenic
TTCAAACTTTGAACAACTTG+TGG	0.515858	8:+64075281	None:intergenic
GTTGTGCAGAGTTCAATCAT+TGG	0.520096	8:-64075170	MsG0880045769.01.T01:CDS
CAGAGTGGCGTTGCTTCAAA+CGG	0.528770	8:-64077174	MsG0880045769.01.T01:CDS
AATAGATGTTGAGTGGATGC+TGG	0.533859	8:+64075962	None:intergenic
AGAGATAATGCACAGATACC+TGG	0.533941	8:+64074305	None:intergenic
GCAGTTGGAACTCCACGACT+TGG	0.537420	8:+64076077	None:intergenic
AAAGTTTGAAAGCACAAGCA+TGG	0.539296	8:-64075268	MsG0880045769.01.T01:CDS
CAACATCAATCAGTCTTGGA+AGG	0.542110	8:+64075587	None:intergenic
GCACTGACTCTCTGGAAGAA+GGG	0.561892	8:-64074468	MsG0880045769.01.T01:CDS
AAAGATGGGATCTTTGTGCA+TGG	0.563821	8:+64074366	None:intergenic
GTTCCTTAAGTAGAGTTGAA+AGG	0.566263	8:+64076045	None:intergenic
AACTCTACTTAAGGAACCTG+TGG	0.573470	8:-64076039	MsG0880045769.01.T01:CDS
ACTCCACGACTTGGATGAGA+AGG	0.596749	8:+64076086	None:intergenic
GTGGATGCTGGACAAATCAA+TGG	0.598568	8:+64075974	None:intergenic
AACATCAATCAGTCTTGGAA+GGG	0.598970	8:+64075588	None:intergenic
AAGATGGGATCTTTGTGCAT+GGG	0.601062	8:+64074367	None:intergenic
AAACCTTCTCATCCAAGTCG+TGG	0.605881	8:-64076089	MsG0880045769.01.T01:CDS
GACTGCAGATAAATCAACAA+TGG	0.620520	8:+64075122	None:intergenic
ACAAAGTACGACCTGACCAC+AGG	0.637592	8:+64076023	None:intergenic
GTACTTTGTTCAAACTGATG+GGG	0.648822	8:-64076009	MsG0880045769.01.T01:CDS
TTACCTGAATAGATGTTGAG+TGG	0.660999	8:+64075955	None:intergenic
CTGACACTGCAATCAGAAAG+GGG	0.667842	8:+64077206	None:intergenic
TGTCAGGCCAAAACTCAGAG+TGG	0.714685	8:-64077189	MsG0880045769.01.T01:CDS
AGCACAAGCATGGAGTGATG+AGG	0.723682	8:-64075258	MsG0880045769.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAAAAAAAAAAAACTTGTT+TGG	+	Chr8:64075030-64075049	None:intergenic	10.0%
!!!	TTTTCTAATAATAGAAAATT+CGG	+	Chr8:64076969-64076988	None:intergenic	10.0%
!!	AAAATCTTATGAACTAAATA+TGG	+	Chr8:64075253-64075272	None:intergenic	15.0%
!!	AAATGTCATAAAACTATAAT+AGG	-	Chr8:64076285-64076304	MsG0880045769.01.T01:intron	15.0%
!!	TATGAAATTACAAAGAAAAA+TGG	+	Chr8:64077215-64077234	None:intergenic	15.0%
!!	TTTCTAATAATAGAAAATTC+GGG	+	Chr8:64076968-64076987	None:intergenic	15.0%
!!!	ATATTTTGTAGAATTGTTTT+TGG	-	Chr8:64074677-64074696	MsG0880045769.01.T01:intron	15.0%
!!!	ATTATTAGAAAAGTTTTCAT+AGG	-	Chr8:64076977-64076996	MsG0880045769.01.T01:intron	15.0%
!!!	ATTCAGAATTTTCATATTTT+GGG	+	Chr8:64075568-64075587	None:intergenic	15.0%
!!!	TATTCAGAATTTTCATATTT+TGG	+	Chr8:64075569-64075588	None:intergenic	15.0%
!!	TCATAAAAAATAACTATTGC+CGG	+	Chr8:64076023-64076042	None:intergenic	20.0%
!!	TTCAAATAGAAATTAGCATT+AGG	+	Chr8:64075721-64075740	None:intergenic	20.0%
!!!	CTGATTATTTATGATTTGTT+GGG	-	Chr8:64075761-64075780	MsG0880045769.01.T01:intron	20.0%
!!!	GTTAGCATTTTAATAGAAAA+AGG	-	Chr8:64076442-64076461	MsG0880045769.01.T01:intron	20.0%
!!!	TAGTTATTTTTTATGATGCT+AGG	-	Chr8:64076027-64076046	MsG0880045769.01.T01:CDS	20.0%
!!!	TTCAGAATTTTCATATTTTG+GGG	+	Chr8:64075567-64075586	None:intergenic	20.0%
!	AAAAATGAGACGAAACATAA+TGG	+	Chr8:64075957-64075976	None:intergenic	25.0%
!	AAAACAAATTGGCAAAAGAA+TGG	+	Chr8:64076096-64076115	None:intergenic	25.0%
!	AAAATGTGGTTTGATGAAAT+TGG	-	Chr8:64076564-64076583	MsG0880045769.01.T01:intron	25.0%
!	ACTTAAAACTTGATGTCAAA+AGG	-	Chr8:64076141-64076160	MsG0880045769.01.T01:intron	25.0%
!	AGAAATTCCATTCTTCATAA+TGG	+	Chr8:64076881-64076900	None:intergenic	25.0%
!	ATCAAAAACATCATCAATAC+TGG	+	Chr8:64074360-64074379	None:intergenic	25.0%
!	ATGCATATCAAAACAATAGA+AGG	+	Chr8:64076659-64076678	None:intergenic	25.0%
!	ATTATGAAGAATGGAATTTC+TGG	-	Chr8:64076880-64076899	MsG0880045769.01.T01:intron	25.0%
!	ATTCCTCGTAAATGAAAAAA+AGG	+	Chr8:64076784-64076803	None:intergenic	25.0%
!	CATAAAAAATAACTATTGCC+GGG	+	Chr8:64076022-64076041	None:intergenic	25.0%
!	CCAACAAATCATAAATAATC+AGG	+	Chr8:64075763-64075782	None:intergenic	25.0%
!	CTTAAAACTTGATGTCAAAA+GGG	-	Chr8:64076142-64076161	MsG0880045769.01.T01:intron	25.0%
!	GAAATTCCATTCTTCATAAT+GGG	+	Chr8:64076880-64076899	None:intergenic	25.0%
!	GATATGTAAATGTCTTTGAT+AGG	-	Chr8:64074505-64074524	MsG0880045769.01.T01:intron	25.0%
!	TAAAAAGAGAAAACTGAAAC+TGG	+	Chr8:64074761-64074780	None:intergenic	25.0%
!	TAAGAGTTCTACAAAAGAAA+AGG	-	Chr8:64075916-64075935	MsG0880045769.01.T01:intron	25.0%
!	TATATGATGACTTGAAAATG+TGG	-	Chr8:64076550-64076569	MsG0880045769.01.T01:intron	25.0%
!	TCTAACAACCTAAAACAAAT+TGG	+	Chr8:64076107-64076126	None:intergenic	25.0%
!	TTCCTCGTAAATGAAAAAAA+GGG	+	Chr8:64076783-64076802	None:intergenic	25.0%
!	TTTACTAACATATGTTGTTC+AGG	-	Chr8:64075975-64075994	MsG0880045769.01.T01:CDS	25.0%
!	TTTATCTCTATTCTATCATC+TGG	-	Chr8:64076906-64076925	MsG0880045769.01.T01:intron	25.0%
!!	AAAGTTTTCATAGGATTTGT+TGG	-	Chr8:64076986-64077005	MsG0880045769.01.T01:intron	25.0%
!!	CCTGATTATTTATGATTTGT+TGG	-	Chr8:64075760-64075779	MsG0880045769.01.T01:intron	25.0%
!!	GAATTGGCAATTTTCATTAA+TGG	-	Chr8:64074813-64074832	MsG0880045769.01.T01:intron	25.0%
!!!	ATATTTTGGGGTTAAAAAAC+CGG	+	Chr8:64075555-64075574	None:intergenic	25.0%
!!!	CTTTTTTTTTCCTTTTTTCC+CGG	-	Chr8:64076001-64076020	MsG0880045769.01.T01:CDS	25.0%
!!!	GATAATTTTGGTGTTGTAAT+TGG	-	Chr8:64074461-64074480	MsG0880045769.01.T01:CDS	25.0%
!!!	GTATTGATGATGTTTTTGAT+TGG	-	Chr8:64074360-64074379	MsG0880045769.01.T01:CDS	25.0%
!!!	TTCTTTTGCCAATTTGTTTT+AGG	-	Chr8:64076096-64076115	MsG0880045769.01.T01:CDS	25.0%
!!!	TTTTGATTGGATTGGTAAAA+TGG	-	Chr8:64074373-64074392	MsG0880045769.01.T01:CDS	25.0%
	ACATCATCAATACTGGTAAA+TGG	+	Chr8:64074353-64074372	None:intergenic	30.0%
	ACTCTTATACTGCATAATTG+GGG	+	Chr8:64075135-64075154	None:intergenic	30.0%
	ATCTATTCAGGTAAGTTTAC+CGG	-	Chr8:64075533-64075552	MsG0880045769.01.T01:intron	30.0%
	CAATAGAAGGAAACAAATTG+TGG	+	Chr8:64076646-64076665	None:intergenic	30.0%
	GAAATCATGCTCTTCAAAAT+TGG	+	Chr8:64077155-64077174	None:intergenic	30.0%
	GACTCTTATACTGCATAATT+GGG	+	Chr8:64075136-64075155	None:intergenic	30.0%
	GCTCAAAATATTTCTTTCAG+AGG	+	Chr8:64074543-64074562	None:intergenic	30.0%
	TCCTCGTAAATGAAAAAAAG+GGG	+	Chr8:64076782-64076801	None:intergenic	30.0%
	TCTCAATCAGAAAACAGTTT+CGG	+	Chr8:64075004-64075023	None:intergenic	30.0%
	TGACTCTTATACTGCATAAT+TGG	+	Chr8:64075137-64075156	None:intergenic	30.0%
	TTAACAACATCAATCAGTCT+TGG	+	Chr8:64075899-64075918	None:intergenic	30.0%
	TTATTGCATGCAGTAATAGA+TGG	-	Chr8:64075667-64075686	MsG0880045769.01.T01:intron	30.0%
	TTCAAACTTTGAACAACTTG+TGG	+	Chr8:64076201-64076220	None:intergenic	30.0%
	TTCTATTTGAAGAACACTGA+CGG	-	Chr8:64075730-64075749	MsG0880045769.01.T01:intron	30.0%
	TTGAATATTTGGCTACTTCA+AGG	-	Chr8:64075867-64075886	MsG0880045769.01.T01:intron	30.0%
!	AGTAAATTTTCAGCAGGAAA+AGG	+	Chr8:64076260-64076279	None:intergenic	30.0%
!	AGTTCATCAGCTGATAATTT+TGG	-	Chr8:64074449-64074468	MsG0880045769.01.T01:CDS	30.0%
!	ATATTTTCTCGCCAAAAGAT+GGG	+	Chr8:64077130-64077149	None:intergenic	30.0%
!	TATATTTTCTCGCCAAAAGA+TGG	+	Chr8:64077131-64077150	None:intergenic	30.0%
!	TCAACAAGTAAATTTTCAGC+AGG	+	Chr8:64076266-64076285	None:intergenic	30.0%
!	TTTTGTGAATCGCAAAAACA+CGG	-	Chr8:64074789-64074808	MsG0880045769.01.T01:intron	30.0%
!!	GATGATGTTTTTGATTGGAT+TGG	-	Chr8:64074365-64074384	MsG0880045769.01.T01:CDS	30.0%
!!	TTGTTTTTCTCAGAACTCTT+TGG	-	Chr8:64076478-64076497	MsG0880045769.01.T01:intron	30.0%
	AAACCAAAACTCATCCAAAC+AGG	-	Chr8:64075109-64075128	MsG0880045769.01.T01:intron	35.0%
	AACATCAATCAGTCTTGGAA+GGG	+	Chr8:64075894-64075913	None:intergenic	35.0%
	AAGGAAACAAATTGTGGCTA+TGG	+	Chr8:64076640-64076659	None:intergenic	35.0%
	ACCTATAGGCATAGTTCATA+CGG	+	Chr8:64075614-64075633	None:intergenic	35.0%
	AGAAAACTGAAACTGGAAAC+AGG	+	Chr8:64074754-64074773	None:intergenic	35.0%
	AGTCACATTTGATCTACCAA+CGG	-	Chr8:64075152-64075171	MsG0880045769.01.T01:CDS	35.0%
	ATAACTATTGCCGGGAAAAA+AGG	+	Chr8:64076014-64076033	None:intergenic	35.0%
	ATCAGCTGATGAACTGAATT+GGG	+	Chr8:64074444-64074463	None:intergenic	35.0%
	CATTTACGAGGAATTCTTTC+TGG	-	Chr8:64076790-64076809	MsG0880045769.01.T01:intron	35.0%
	CGTACTTTGTTCAAACTGAT+GGG	-	Chr8:64075469-64075488	MsG0880045769.01.T01:intron	35.0%
	GACTGCAGATAAATCAACAA+TGG	+	Chr8:64076360-64076379	None:intergenic	35.0%
	GCAAGATAATACATGTGCTA+AGG	+	Chr8:64076610-64076629	None:intergenic	35.0%
	GTACTTTGTTCAAACTGATG+GGG	-	Chr8:64075470-64075489	MsG0880045769.01.T01:intron	35.0%
	GTAGCCAAATATTCAATTGC+AGG	+	Chr8:64075863-64075882	None:intergenic	35.0%
	GTTCCTTAAGTAGAGTTGAA+AGG	+	Chr8:64075437-64075456	None:intergenic	35.0%
	TACAAGCAAGAAGTTCTTCT+CGG	-	Chr8:64077073-64077092	MsG0880045769.01.T01:intron	35.0%
	TAGTTCATACGGTTCAACTA+TGG	+	Chr8:64075603-64075622	None:intergenic	35.0%
	TATCAGCTGATGAACTGAAT+TGG	+	Chr8:64074445-64074464	None:intergenic	35.0%
	TCAAGTCATCATATATGCTG+TGG	+	Chr8:64076545-64076564	None:intergenic	35.0%
	TCGTACTTTGTTCAAACTGA+TGG	-	Chr8:64075468-64075487	MsG0880045769.01.T01:intron	35.0%
	TCTTCTCCCATTATGAAGAA+TGG	-	Chr8:64076871-64076890	MsG0880045769.01.T01:intron	35.0%
	TGAGCCTGCAATTGAATATT+TGG	-	Chr8:64075856-64075875	MsG0880045769.01.T01:intron	35.0%
	TTACCTGAATAGATGTTGAG+TGG	+	Chr8:64075527-64075546	None:intergenic	35.0%
	TTGATGTCAAAAGGGACATT+GGG	-	Chr8:64076150-64076169	MsG0880045769.01.T01:intron	35.0%
	TTGCCTTTCAACTCTACTTA+AGG	-	Chr8:64075431-64075450	MsG0880045769.01.T01:intron	35.0%
	TTTATGATGCTAGGATGAGA+AGG	-	Chr8:64076036-64076055	MsG0880045769.01.T01:CDS	35.0%
!	AAAGTTTGAAAGCACAAGCA+TGG	-	Chr8:64076211-64076230	MsG0880045769.01.T01:intron	35.0%
!	TGATAGTTCTACCACTTCAA+AGG	+	Chr8:64074953-64074972	None:intergenic	35.0%
!!	AACTGAATTGGGTTAGTGAA+AGG	+	Chr8:64074433-64074452	None:intergenic	35.0%
!!	ACTGAATTGGGTTAGTGAAA+GGG	+	Chr8:64074432-64074451	None:intergenic	35.0%
!!	GCTTGCTTGTTATATGAATC+AGG	-	Chr8:64074581-64074600	MsG0880045769.01.T01:intron	35.0%
!!	TTTTGAAGAGCATGATTTCC+AGG	-	Chr8:64077156-64077175	MsG0880045769.01.T01:CDS	35.0%
!!!	ACCCCTTTTTTTCATTTACG+AGG	-	Chr8:64076778-64076797	MsG0880045769.01.T01:intron	35.0%
!!!	GTTTTCATAGGATTTGTTGG+AGG	-	Chr8:64076989-64077008	MsG0880045769.01.T01:intron	35.0%
!!!	TGGATTGGTAAAATGGCTTT+TGG	-	Chr8:64074380-64074399	MsG0880045769.01.T01:CDS	35.0%
	AAAGATGGGATCTTTGTGCA+TGG	+	Chr8:64077116-64077135	None:intergenic	40.0%
	AACTCTACTTAAGGAACCTG+TGG	-	Chr8:64075440-64075459	MsG0880045769.01.T01:intron	40.0%
	AAGATGGGATCTTTGTGCAT+GGG	+	Chr8:64077115-64077134	None:intergenic	40.0%
	AATAGATGTTGAGTGGATGC+TGG	+	Chr8:64075520-64075539	None:intergenic	40.0%
	ACCGTATGAACTATGCCTAT+AGG	-	Chr8:64075610-64075629	MsG0880045769.01.T01:CDS	40.0%
	AGAGATAATGCACAGATACC+TGG	+	Chr8:64077177-64077196	None:intergenic	40.0%
	AGGTATCTGTGCATTATCTC+TGG	-	Chr8:64077176-64077195	MsG0880045769.01.T01:CDS	40.0%
	ATATGGACACTTGTCCAATG+AGG	+	Chr8:64075236-64075255	None:intergenic	40.0%
	ATCGCAAAAACACGGAGAAT+TGG	-	Chr8:64074797-64074816	MsG0880045769.01.T01:intron	40.0%
	CAACATCAATCAGTCTTGGA+AGG	+	Chr8:64075895-64075914	None:intergenic	40.0%
	CATCCACTCAACATCTATTC+AGG	-	Chr8:64075521-64075540	MsG0880045769.01.T01:intron	40.0%
	CTTGATGTCAAAAGGGACAT+TGG	-	Chr8:64076149-64076168	MsG0880045769.01.T01:intron	40.0%
	GCATTAGGCTAGATGCATTT+AGG	+	Chr8:64075706-64075725	None:intergenic	40.0%
	GTCACATTTGATCTACCAAC+GGG	-	Chr8:64075153-64075172	MsG0880045769.01.T01:CDS	40.0%
	GTTGTCTGAATGTCTATGCA+TGG	+	Chr8:64076718-64076737	None:intergenic	40.0%
	GTTGTGCAGAGTTCAATCAT+TGG	-	Chr8:64076309-64076328	MsG0880045769.01.T01:intron	40.0%
	TAGACATACCAAGCTTACAC+AGG	+	Chr8:64075638-64075657	None:intergenic	40.0%
	TCACATTTGATCTACCAACG+GGG	-	Chr8:64075154-64075173	MsG0880045769.01.T01:CDS	40.0%
	TCCAATGAGGATTCATATCG+TGG	+	Chr8:64075223-64075242	None:intergenic	40.0%
	TCCACGATATGAATCCTCAT+TGG	-	Chr8:64075219-64075238	MsG0880045769.01.T01:CDS	40.0%
	TGAAACTGGAAACAGGTTTC+AGG	+	Chr8:64074747-64074766	None:intergenic	40.0%
	TTTGAAGAACACTGACGGAA+TGG	-	Chr8:64075735-64075754	MsG0880045769.01.T01:intron	40.0%
!	GAAAGGCAATTGATAGCAGT+TGG	+	Chr8:64075420-64075439	None:intergenic	40.0%
!	TGCACAAAGATCCCATCTTT+TGG	-	Chr8:64077116-64077135	MsG0880045769.01.T01:CDS	40.0%
!!	GAAACAGGTTTCAGGTGTTT+TGG	+	Chr8:64074739-64074758	None:intergenic	40.0%
!!	TCAGAACTCTTTGGAATGAC+TGG	-	Chr8:64076487-64076506	MsG0880045769.01.T01:intron	40.0%
!!!	CTGGTTGCTCTTTTTTTTGC+TGG	-	Chr8:64076809-64076828	MsG0880045769.01.T01:intron	40.0%
!!!	GCTCTTTTTTTTGCTGGATG+TGG	-	Chr8:64076815-64076834	MsG0880045769.01.T01:intron	40.0%
	AAACCTTCTCATCCAAGTCG+TGG	-	Chr8:64075390-64075409	MsG0880045769.01.T01:intron	45.0%
	AAGCTTACACAGGCACCTAT+AGG	+	Chr8:64075628-64075647	None:intergenic	45.0%
	AGAAGTTCTTCTCGGCAATC+TGG	-	Chr8:64077081-64077100	MsG0880045769.01.T01:intron	45.0%
	CACATTTGATCTACCAACGG+GGG	-	Chr8:64075155-64075174	MsG0880045769.01.T01:CDS	45.0%
	CCTGACACTGCAATCAGAAA+GGG	+	Chr8:64074277-64074296	None:intergenic	45.0%
	CTAGTAAGCAAGCATTCGAG+GGG	+	Chr8:64076522-64076541	None:intergenic	45.0%
	CTGAACAACACGAGAATGCT+AGG	-	Chr8:64074869-64074888	MsG0880045769.01.T01:intron	45.0%
	CTGACACTGCAATCAGAAAG+GGG	+	Chr8:64074276-64074295	None:intergenic	45.0%
	GCTAGTAAGCAAGCATTCGA+GGG	+	Chr8:64076523-64076542	None:intergenic	45.0%
	GTGGATGCTGGACAAATCAA+TGG	+	Chr8:64075508-64075527	None:intergenic	45.0%
	TACTTAAGGAACCTGTGGTC+AGG	-	Chr8:64075445-64075464	MsG0880045769.01.T01:intron	45.0%
	TAGTAAGCAAGCATTCGAGG+GGG	+	Chr8:64076521-64076540	None:intergenic	45.0%
	TATAGGTGCCTGTGTAAGCT+TGG	-	Chr8:64075627-64075646	MsG0880045769.01.T01:intron	45.0%
	TTCTTCTCGGCAATCTGGAT+TGG	-	Chr8:64077086-64077105	MsG0880045769.01.T01:intron	45.0%
!	GCGTGTATGTTCCTTTGAAG+TGG	-	Chr8:64074939-64074958	MsG0880045769.01.T01:intron	45.0%
!!!	GGTAAAATGGCTTTTGGAGC+AGG	-	Chr8:64074386-64074405	MsG0880045769.01.T01:CDS	45.0%
	ACAAAGTACGACCTGACCAC+AGG	+	Chr8:64075459-64075478	None:intergenic	50.0%
	AGCACAAGCATGGAGTGATG+AGG	-	Chr8:64076221-64076240	MsG0880045769.01.T01:intron	50.0%
	ATATCGTGGATCACCACAGC+TGG	+	Chr8:64075209-64075228	None:intergenic	50.0%
	CAGAGTGGCGTTGCTTCAAA+CGG	-	Chr8:64074305-64074324	MsG0880045769.01.T01:CDS	50.0%
	CCCTTTCTGATTGCAGTGTC+AGG	-	Chr8:64074274-64074293	MsG0880045769.01.T01:CDS	50.0%
	CTGCATAATTGGGGCCTGTT+TGG	+	Chr8:64075126-64075145	None:intergenic	50.0%
	GCCTGACACTGCAATCAGAA+AGG	+	Chr8:64074278-64074297	None:intergenic	50.0%
	GGCTAGTAAGCAAGCATTCG+AGG	+	Chr8:64076524-64076543	None:intergenic	50.0%
	TATCGTGGATCACCACAGCT+GGG	+	Chr8:64075208-64075227	None:intergenic	50.0%
	TGTCAGGCCAAAACTCAGAG+TGG	-	Chr8:64074290-64074309	MsG0880045769.01.T01:CDS	50.0%
	TTGATCTACCAACGGGGGTT+GGG	-	Chr8:64075160-64075179	MsG0880045769.01.T01:CDS	50.0%
	TTTGATCTACCAACGGGGGT+TGG	-	Chr8:64075159-64075178	MsG0880045769.01.T01:CDS	50.0%
!	ACTCCACGACTTGGATGAGA+AGG	+	Chr8:64075396-64075415	None:intergenic	50.0%
!	AGCAACGCCACTCTGAGTTT+TGG	+	Chr8:64074300-64074319	None:intergenic	50.0%
!	CTCTCTGGAAGAAGGGCTTA+AGG	-	Chr8:64077018-64077037	MsG0880045769.01.T01:intron	50.0%
!	GGGCCTGTTTGGATGAGTTT+TGG	+	Chr8:64075115-64075134	None:intergenic	50.0%
!!	GCACTGACTCTCTGGAAGAA+GGG	-	Chr8:64077011-64077030	MsG0880045769.01.T01:intron	50.0%
	AAGCAAGCATTCGAGGGGGA+TGG	+	Chr8:64076517-64076536	None:intergenic	55.0%
	AGCAAGCATTCGAGGGGGAT+GGG	+	Chr8:64076516-64076535	None:intergenic	55.0%
	AGGGACATTGGGTGCTCAGA+TGG	-	Chr8:64076161-64076180	MsG0880045769.01.T01:intron	55.0%
	ATCGTGGATCACCACAGCTG+GGG	+	Chr8:64075207-64075226	None:intergenic	55.0%
	GCAGTTGGAACTCCACGACT+TGG	+	Chr8:64075405-64075424	None:intergenic	55.0%
	GGGGTTGGGTCTTGCAAAAG+AGG	-	Chr8:64075174-64075193	MsG0880045769.01.T01:CDS	55.0%
!!	GGCACTGACTCTCTGGAAGA+AGG	-	Chr8:64077010-64077029	MsG0880045769.01.T01:intron	55.0%
!!	TGTTGGAGGCACTGACTCTC+TGG	-	Chr8:64077003-64077022	MsG0880045769.01.T01:intron	55.0%
	GCAAGCATTCGAGGGGGATG+GGG	+	Chr8:64076515-64076534	None:intergenic	60.0%
	TCGTGGATCACCACAGCTGG+GGG	+	Chr8:64075206-64075225	None:intergenic	60.0%
	TTGCAAGACCCAACCCCCGT+TGG	+	Chr8:64075171-64075190	None:intergenic	60.0%
	CGTGGATCACCACAGCTGGG+GGG	+	Chr8:64075205-64075224	None:intergenic	65.0%
	GAGGCTCGTCCCCCCAGCTG+TGG	-	Chr8:64075193-64075212	MsG0880045769.01.T01:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	64074267	64077234	64074267	ID=MsG0880045769.01;Name=MsG0880045769.01
Chr8	mRNA	64074267	64077234	64074267	ID=MsG0880045769.01.T01;Parent=MsG0880045769.01;Name=MsG0880045769.01.T01;_AED=0.47;_eAED=0.61;_QI=0\|0.25\|0\|1\|0.75\|0.8\|5\|0\|279
Chr8	exon	64077094	64077234	64077094	ID=MsG0880045769.01.T01:exon:24397;Parent=MsG0880045769.01.T01
Chr8	exon	64075947	64076117	64075947	ID=MsG0880045769.01.T01:exon:24396;Parent=MsG0880045769.01.T01
Chr8	exon	64075564	64075641	64075564	ID=MsG0880045769.01.T01:exon:24395;Parent=MsG0880045769.01.T01
Chr8	exon	64075125	64075321	64075125	ID=MsG0880045769.01.T01:exon:24394;Parent=MsG0880045769.01.T01
Chr8	exon	64074267	64074516	64074267	ID=MsG0880045769.01.T01:exon:24393;Parent=MsG0880045769.01.T01
Chr8	CDS	64077094	64077234	64077094	ID=MsG0880045769.01.T01:cds;Parent=MsG0880045769.01.T01
Chr8	CDS	64075947	64076117	64075947	ID=MsG0880045769.01.T01:cds;Parent=MsG0880045769.01.T01
Chr8	CDS	64075564	64075641	64075564	ID=MsG0880045769.01.T01:cds;Parent=MsG0880045769.01.T01
Chr8	CDS	64075125	64075321	64075125	ID=MsG0880045769.01.T01:cds;Parent=MsG0880045769.01.T01
Chr8	CDS	64074267	64074516	64074267	ID=MsG0880045769.01.T01:cds;Parent=MsG0880045769.01.T01

Gene Sequence

>MsG0880045769.01.T01

ATGTCACCCCTTTCTGATTGCAGTGTCAGGCCAAAACTCAGAGTGGCGTTGCTTCAAACGGAGAAGCTTCAAATGAAAAGAAACCATTTACCAGTATTGATGATGTTTTTGATTGGATTGGTAAAATGGCTTTTGGAGCAGTTGAAGAAACCTTCTCATCCAAGTCGTGGAGTTCCAACTGCTATCAATTGCCTTTCAACTCTACTTAAGGAACCTGTGGTCAGGTCGTACTTTGTTCAAACTGATGGGGTCAAGTTGCTTGCCATTGATTTGTCCAGCATCCACTCAACATCTATTCAGGTAAGTTTACCGCCTGCAATTGAATATTTGGCTACTTCAAGGACCCTTCCAAGACTGATTGATGTTGTTAAGAGTTCTACAAAAGAAAAGATGGTTGATCTTCAGCTGCCACAAGTTGTTCAAAGTTTGAAAGCACAAGCATGGAGTGATGAGGTGAATCATCATTACCTTTTCCTGCTGAAAATTTACTTGTTGAAATGTCATAAAACTATAATAGGTGTTGTGCAGAGTTCAATCATTGGAAATGACTCTTGTTTGCACATCTCGCCATTGTTGATTTATCTGCAAAAAGTTTTCATAGGATTTGTTGGAGGCACTGACTCTCTGGAAGAAGGGCTTAAGGATAACATCAAGAAACTAAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTTCTCGGCAATCTGGATTGGTCTCCCATGCACAAAGATCCCATCTTTTGGCGAGAAAATATAACCAATTTTGAAGAGCATGATTTCCAGGTATCTGTGCATTATCTCTGGCATACTTGTGATTCCATTTTTCTTTGTAATTTCATA

Protein sequence

>MsG0880045769.01.T01

MSPLSDCSVRPKLRVALLQTEKLQMKRNHLPVLMMFLIGLVKWLLEQLKKPSHPSRGVPTAINCLSTLLKEPVVRSYFVQTDGVKLLAIDLSSIHSTSIQVSLPPAIEYLATSRTLPRLIDVVKSSTKEKMVDLQLPQVVQSLKAQAWSDEVNHHYLFLLKIYLLKCHKTIIGVVQSSIIGNDSCLHISPLLIYLQKVFIGFVGGTDSLEEGLKDNIKKLSSFDKYKQEVLLGNLDWSPMHKDPIFWRENITNFEEHDFQVSVHYLWHTCDSIFLCNFI