AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004444.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004444.01.T01 MTR_1g079950 100.000 322 0 0 1 322 1 322 0.0 670
MsG0180004444.01.T01 MTR_1g079950 100.000 319 0 0 1 319 30 348 0.0 667
MsG0180004444.01.T01 MTR_1g079950 100.000 319 0 0 1 319 1 319 0.0 666
MsG0180004444.01.T01 MTR_1g079950 100.000 319 0 0 1 319 1 319 0.0 665
MsG0180004444.01.T01 MTR_7g116380 92.857 322 23 0 1 322 1 322 0.0 637
MsG0180004444.01.T01 MTR_7g116380 92.790 319 23 0 1 319 1 319 0.0 632
MsG0180004444.01.T01 MTR_5g081230 89.073 302 32 1 1 301 17 318 0.0 567
MsG0180004444.01.T01 MTR_1g074880 81.875 320 57 1 1 320 1 319 0.0 565
MsG0180004444.01.T01 MTR_1g074880 82.748 313 54 0 1 313 1 313 0.0 564
MsG0180004444.01.T01 MTR_1g043240 82.555 321 55 1 1 320 1 321 0.0 563
MsG0180004444.01.T01 MTR_1g079950 100.000 260 0 0 60 319 34 293 0.0 552
MsG0180004444.01.T01 MTR_8g098980 79.114 316 64 2 1 315 1 315 0.0 539
MsG0180004444.01.T01 MTR_8g005010 80.623 289 56 0 6 294 4 292 0.0 504
MsG0180004444.01.T01 MTR_7g112870 74.843 318 74 2 1 318 5 316 2.33e-180 501
MsG0180004444.01.T01 MTR_1g074880 83.588 262 42 1 59 320 4 264 1.03e-170 474
MsG0180004444.01.T01 MTR_1g074880 84.706 255 39 0 59 313 4 258 1.85e-170 474
MsG0180004444.01.T01 MTR_7g107310 45.608 296 159 2 4 298 5 299 8.57e-98 291
MsG0180004444.01.T01 MTR_8g062430 46.488 299 151 3 3 300 4 294 2.46e-97 290
MsG0180004444.01.T01 MTR_5g093990 47.464 276 144 1 26 300 17 292 1.09e-96 288
MsG0180004444.01.T01 MTR_8g085610 45.918 294 150 3 6 298 9 294 2.62e-96 287
MsG0180004444.01.T01 MTR_5g037200 45.819 299 153 3 3 300 4 294 3.23e-95 285
MsG0180004444.01.T01 MTR_8g085610 47.037 270 141 2 30 298 2 270 1.91e-93 279
MsG0180004444.01.T01 MTR_1g039380 42.652 279 157 3 25 301 15 292 3.33e-90 271
MsG0180004444.01.T01 MTR_1g039380 42.857 266 149 3 38 301 4 268 2.38e-87 263
MsG0180004444.01.T01 MTR_1g089370 46.774 310 146 7 3 294 522 830 2.08e-84 272
MsG0180004444.01.T01 MTR_2g087530 46.926 309 147 7 3 294 525 833 2.24e-82 267
MsG0180004444.01.T01 MTR_2g087530 46.926 309 147 7 3 294 638 946 3.59e-82 268
MsG0180004444.01.T01 MTR_4g050540 46.926 309 147 7 3 294 643 951 4.80e-82 268
MsG0180004444.01.T01 MTR_3g452710 43.182 264 143 4 22 279 184 446 1.69e-70 227
MsG0180004444.01.T01 MTR_3g452710 43.182 264 143 4 22 279 251 513 7.10e-70 227
MsG0180004444.01.T01 MTR_2g100130 42.570 249 135 5 38 279 118 365 2.25e-66 214
MsG0180004444.01.T01 MTR_2g100130 42.570 249 135 5 38 279 227 474 1.80e-65 214
MsG0180004444.01.T01 MTR_2g100130 42.570 249 135 5 38 279 217 464 1.96e-65 214
MsG0180004444.01.T01 MTR_2g100130 42.570 249 135 5 38 279 188 435 2.28e-65 213
MsG0180004444.01.T01 MTR_2g100130 42.570 249 135 5 38 279 227 474 2.34e-65 214
MsG0180004444.01.T01 MTR_2g100130 42.570 249 134 6 38 279 227 473 5.86e-64 211
MsG0180004444.01.T01 MTR_2g100130 42.570 249 134 6 38 279 188 434 7.15e-64 209
MsG0180004444.01.T01 MTR_2g100130 43.096 239 128 5 38 269 227 464 9.61e-64 209
MsG0180004444.01.T01 MTR_2g100160 42.742 248 134 5 39 279 138 384 1.30e-60 199
MsG0180004444.01.T01 MTR_5g037200 47.644 191 92 2 2 191 3 186 2.05e-59 190
MsG0180004444.01.T01 MTR_8g072600 30.746 335 162 11 33 297 100 434 3.71e-37 138
MsG0180004444.01.T01 MTR_8g072600 31.873 251 127 7 33 239 100 350 2.66e-30 118
MsG0180004444.01.T01 MTR_2g099710 29.670 273 146 11 31 268 211 472 4.12e-22 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004444.01.T01 AT2G39840 89.073 302 32 1 1 301 14 315 0.0 568
MsG0180004444.01.T01 AT5G59160 85.479 303 42 2 1 301 9 311 0.0 547
MsG0180004444.01.T01 AT5G59160 85.479 303 42 2 1 301 9 311 0.0 547
MsG0180004444.01.T01 AT5G59160 85.479 303 42 2 1 301 9 311 0.0 547
MsG0180004444.01.T01 AT2G29400 85.099 302 41 3 1 299 15 315 0.0 546
MsG0180004444.01.T01 AT3G46820 82.508 303 51 1 1 301 9 311 0.0 535
MsG0180004444.01.T01 AT1G64040 79.114 316 64 2 1 315 1 315 0.0 534
MsG0180004444.01.T01 AT5G43380 79.355 310 64 0 1 310 1 310 0.0 528
MsG0180004444.01.T01 AT5G43380 77.812 320 71 0 1 320 1 320 0.0 528
MsG0180004444.01.T01 AT5G43380 79.355 310 64 0 1 310 1 310 0.0 526
MsG0180004444.01.T01 AT4G11240 75.232 323 78 2 1 322 1 322 0.0 520
MsG0180004444.01.T01 AT5G27840 80.000 295 57 1 1 295 9 301 0.0 503
MsG0180004444.01.T01 AT5G27840 80.000 295 57 1 1 295 9 301 0.0 503
MsG0180004444.01.T01 AT5G27840 80.000 295 57 1 1 295 9 301 0.0 503
MsG0180004444.01.T01 AT5G27840 80.000 295 57 1 1 295 9 301 0.0 503
MsG0180004444.01.T01 AT3G05580 80.000 295 57 1 1 295 9 301 2.78e-179 498
MsG0180004444.01.T01 AT3G05580 79.675 246 48 1 1 246 9 252 1.14e-145 410
MsG0180004444.01.T01 AT2G42500 46.939 294 147 3 6 298 14 299 5.87e-100 297
MsG0180004444.01.T01 AT5G55260 47.826 276 143 1 26 300 17 292 5.53e-99 294
MsG0180004444.01.T01 AT3G58500 46.259 294 149 3 6 298 14 299 2.99e-98 293
MsG0180004444.01.T01 AT1G10430 45.946 296 151 3 6 300 7 294 3.16e-96 287
MsG0180004444.01.T01 AT1G10430 45.946 296 151 3 6 300 7 294 3.16e-96 287
MsG0180004444.01.T01 AT1G69960 45.608 296 152 3 6 300 8 295 4.82e-96 286
MsG0180004444.01.T01 AT4G26720 45.290 276 150 1 26 300 17 292 4.82e-96 286
MsG0180004444.01.T01 AT1G59830 45.270 296 153 3 6 300 7 294 1.42e-94 283
MsG0180004444.01.T01 AT5G55260 41.640 317 143 2 26 300 17 333 1.30e-90 274
MsG0180004444.01.T01 AT3G19980 42.294 279 158 3 25 301 15 292 2.55e-89 270
MsG0180004444.01.T01 AT1G50370 41.935 279 159 3 25 301 15 292 2.75e-89 269
MsG0180004444.01.T01 AT4G03080 46.452 310 147 8 3 294 524 832 3.29e-83 269
MsG0180004444.01.T01 AT1G59830 47.791 249 121 3 6 253 7 247 1.41e-82 251
MsG0180004444.01.T01 AT2G27210 46.278 309 149 7 3 294 644 952 4.77e-81 265
MsG0180004444.01.T01 AT2G27210 46.278 309 149 7 3 294 649 957 5.42e-81 265
MsG0180004444.01.T01 AT1G08420 46.429 308 148 7 4 294 661 968 1.99e-80 263
MsG0180004444.01.T01 AT1G08420 46.429 308 148 7 4 294 656 963 2.11e-80 263
MsG0180004444.01.T01 AT2G42500 49.321 221 110 2 79 298 33 252 1.12e-77 238
MsG0180004444.01.T01 AT1G03445 45.775 284 137 7 26 294 476 757 2.24e-77 252
MsG0180004444.01.T01 AT1G03445 45.775 284 137 7 26 294 476 757 2.48e-77 252
MsG0180004444.01.T01 AT2G42810 42.966 263 143 4 23 279 187 448 1.13e-68 222
MsG0180004444.01.T01 AT2G42810 42.966 263 143 4 23 279 187 448 1.13e-68 222
MsG0180004444.01.T01 AT2G42810 42.966 263 143 4 23 279 187 448 1.13e-68 222
MsG0180004444.01.T01 AT2G42810 40.845 284 157 5 2 279 224 502 2.52e-68 223
MsG0180004444.01.T01 AT2G42810 40.845 284 157 5 2 279 223 501 2.75e-68 223
MsG0180004444.01.T01 AT2G42500 44.910 167 81 4 6 168 14 173 3.37e-46 155
MsG0180004444.01.T01 AT2G42500 45.087 173 82 5 6 174 14 177 4.01e-46 154
MsG0180004444.01.T01 AT2G42500 46.541 159 74 4 6 160 14 165 1.40e-45 153
MsG0180004444.01.T01 AT5G63870 31.325 332 160 12 33 297 52 382 1.38e-35 133
MsG0180004444.01.T01 AT5G63870 31.325 332 160 12 33 297 52 382 1.38e-35 133
MsG0180004444.01.T01 AT5G63870 31.984 247 128 6 33 239 52 298 4.25e-29 113
MsG0180004444.01.T01 AT1G48120 29.530 298 150 7 31 268 628 925 8.40e-27 111
MsG0180004444.01.T01 AT5G10900 29.965 287 156 10 34 277 199 483 5.35e-24 102
MsG0180004444.01.T01 AT5G10900 29.965 287 156 10 34 277 199 483 5.79e-24 102
MsG0180004444.01.T01 AT5G10900 32.068 237 134 7 34 245 199 433 6.85e-24 102

Find 84 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCTGACTTACATAATT+TGG 0.116324 1:+78106488 MsG0180004444.01.T01:CDS
TATCAGCTGGCTTTAATATT+TGG 0.125928 1:-78107162 None:intergenic
CTTGCAGCAACCTAATTTAT+TGG 0.157351 1:+78101885 MsG0180004444.01.T01:CDS
TTGATTTGATTGATTTAATT+AGG 0.233828 1:-78101422 None:intergenic
GGTTTACGGAGTCAGAATTT+TGG 0.233910 1:-78101525 None:intergenic
TGGGCATTCGTAGTTTGTTT+TGG 0.242326 1:-78101505 None:intergenic
GCTTCAAGCTCCAATAAATT+AGG 0.261678 1:-78101895 None:intergenic
GCTTCTATTAACCGTATATA+TGG 0.271123 1:+78106342 MsG0180004444.01.T01:CDS
GTCAGTATTCTGATCTTCTA+AGG 0.287479 1:+78106160 MsG0180004444.01.T01:CDS
ACACCTGCTGGAGAGTTTCC+TGG 0.299462 1:-78107226 None:intergenic
GTTTCTTCAGAAGCATGATT+TGG 0.317593 1:+78106662 MsG0180004444.01.T01:CDS
GAAGGTTCAATGTAAGGATA+TGG 0.319884 1:+78106385 MsG0180004444.01.T01:CDS
AAATTACCACAAATCTTAAT+AGG 0.331310 1:-78101919 None:intergenic
AGAGATGGAACAAGCAGTTT+TGG 0.343273 1:+78101756 MsG0180004444.01.T01:intron
TCTTATTTGCCGTGCTCATC+AGG 0.350335 1:+78106686 MsG0180004444.01.T01:CDS
CGGTGTCGTTTAGAGGTTTA+CGG 0.366473 1:-78101539 None:intergenic
TCGCAAAGCAAACCTGTATC+AGG 0.371447 1:-78106546 None:intergenic
CAACCTTGAACTTCTTTGCT+AGG 0.376807 1:-78106585 None:intergenic
GACAGCTGAACCTGCTTCCC+TGG 0.395189 1:-78101817 None:intergenic
GTTTGCTTTGCGATCTCCTC+TGG 0.402187 1:+78106556 MsG0180004444.01.T01:CDS
AGAGGAACGGTGTCGTTTAG+AGG 0.402913 1:-78101546 None:intergenic
CCGACTGATGTGCCTGATAC+AGG 0.405760 1:+78106534 MsG0180004444.01.T01:CDS
CATCATAAAATCCATATATA+CGG 0.411444 1:-78106353 None:intergenic
GAAGCACCTATTAAGATTTG+TGG 0.413609 1:+78101913 MsG0180004444.01.T01:CDS
ATATACATTTGGTGCTGATA+AGG 0.419606 1:+78106632 MsG0180004444.01.T01:CDS
GGTTAATAGAAGCACATTCA+TGG 0.425951 1:-78106332 None:intergenic
TCAAACTCCCCACAGTAATT+AGG 0.429403 1:-78107091 None:intergenic
TAGCAAAGAAGTTCAAGGTT+GGG 0.430512 1:+78106587 MsG0180004444.01.T01:CDS
CTTCCTACCTTTACACCTGC+TGG 0.435417 1:-78107238 None:intergenic
AACCTTGAACTTCTTTGCTA+GGG 0.443540 1:-78106584 None:intergenic
GATATGAGTTCTTTGCTAAC+CGG 0.448265 1:+78107044 MsG0180004444.01.T01:CDS
GTAAAAGAAGGTTCAATGTA+AGG 0.466323 1:+78106379 MsG0180004444.01.T01:CDS
TGATCCAAATTATGTAAGTC+AGG 0.467364 1:-78106492 None:intergenic
AGGGGAGTGTCATATACATT+TGG 0.476024 1:+78106621 MsG0180004444.01.T01:CDS
CTTGAAGTTCGTAGCCGTCC+AGG 0.490260 1:+78101799 MsG0180004444.01.T01:CDS
TTCGTTTCAGTGGAATGAAA+GGG 0.496231 1:-78101449 None:intergenic
CTGGACGGCTACGAACTTCA+AGG 0.496906 1:-78101798 None:intergenic
TCGTAGCCGTCCAGGGAAGC+AGG 0.501536 1:+78101807 MsG0180004444.01.T01:CDS
TTTGACCAGGTGGTGGAGGA+TGG 0.504276 1:+78107022 MsG0180004444.01.T01:intron
TTTCGTTTCAGTGGAATGAA+AGG 0.504759 1:-78101450 None:intergenic
GACCCTAGCAAAGAAGTTCA+AGG 0.508316 1:+78106582 MsG0180004444.01.T01:CDS
AGCAAAGAAGTTCAAGGTTG+GGG 0.509636 1:+78106588 MsG0180004444.01.T01:CDS
GCAGGTTCAGCTGTCGGAGA+CGG 0.516990 1:+78101825 MsG0180004444.01.T01:CDS
GGAAGGGAATTTCGTTTCAG+TGG 0.518390 1:-78101459 None:intergenic
TTGGGTGATTATGTGGATCG+AGG 0.524951 1:+78106228 MsG0180004444.01.T01:CDS
AAGGTTGGGGAATGAATGAC+AGG 0.526085 1:+78106601 MsG0180004444.01.T01:CDS
TTTATGATGAGTGTAAAAGA+AGG 0.531875 1:+78106367 MsG0180004444.01.T01:CDS
AAAATATTGTTACAAGCTGC+CGG 0.536379 1:-78107063 None:intergenic
AAACTCTCCAGCAGGTGTAA+AGG 0.539592 1:+78107231 MsG0180004444.01.T01:CDS
TGGGTGATTATGTGGATCGA+GGG 0.542417 1:+78106229 MsG0180004444.01.T01:CDS
TGACGATGAAGACGAGGAGG+AGG 0.543442 1:-78101588 None:intergenic
TTTCGGCGCCTAATTACTGT+GGG 0.546628 1:+78107083 MsG0180004444.01.T01:CDS
TTAATTAGGTCACGGAAGGA+AGG 0.566472 1:-78101408 None:intergenic
GCACATCAGTCGGCCTCTGT+AGG 0.567167 1:-78106524 None:intergenic
AGAGTTTCCTGGTTTAGTAG+TGG 0.569550 1:-78107215 None:intergenic
CCTGTATCAGGCACATCAGT+CGG 0.573201 1:-78106534 None:intergenic
TCATCAATGAGGGCTGCCAC+AGG 0.577241 1:-78106438 None:intergenic
TGATTTAATTAGGTCACGGA+AGG 0.579383 1:-78101412 None:intergenic
GTATGGTGGATTACCTCCTC+AGG 0.580103 1:+78106191 MsG0180004444.01.T01:CDS
AAACCAGGAAACTCTCCAGC+AGG 0.580760 1:+78107223 MsG0180004444.01.T01:CDS
CTAGCAAAGAAGTTCAAGGT+TGG 0.581376 1:+78106586 MsG0180004444.01.T01:CDS
CGTTTCAGTGGAATGAAAGG+GGG 0.582060 1:-78101447 None:intergenic
TTGAAGTTCGTAGCCGTCCA+GGG 0.585517 1:+78101800 MsG0180004444.01.T01:CDS
AGGGAAGCAGGTTCAGCTGT+CGG 0.588957 1:+78101819 MsG0180004444.01.T01:CDS
AACAAGTAGTTGGCCTGAGG+AGG 0.589163 1:-78106204 None:intergenic
TTGCTTCAATTGCCTACCTG+TGG 0.593940 1:+78106422 MsG0180004444.01.T01:CDS
TGATTGATTTAATTAGGTCA+CGG 0.603517 1:-78101416 None:intergenic
TCGTTTCAGTGGAATGAAAG+GGG 0.605282 1:-78101448 None:intergenic
GTTCAATGTAAGGATATGGA+AGG 0.613524 1:+78106389 MsG0180004444.01.T01:CDS
CTTTGCTAGGGTCTGACCAG+AGG 0.615007 1:-78106572 None:intergenic
TCTCCAGCAGGTGTAAAGGT+AGG 0.616034 1:+78107235 MsG0180004444.01.T01:CDS
GCTGAACCTGCTTCCCTGGA+CGG 0.632476 1:-78101813 None:intergenic
CAATGAGGGCTGCCACAGGT+AGG 0.639222 1:-78106434 None:intergenic
AGTACGACCACTACTAAACC+AGG 0.640553 1:+78107208 MsG0180004444.01.T01:CDS
AAAGTTTAACCTGATGAGCA+CGG 0.643579 1:-78106695 None:intergenic
TAGCAGTAGAACATAGCTGA+CGG 0.659481 1:-78101852 None:intergenic
TGATTGTGACGATGAAGACG+AGG 0.673685 1:-78101594 None:intergenic
TGTGGGGAGTTTGACAACGC+TGG 0.676964 1:+78107100 MsG0180004444.01.T01:CDS
TTCGGCGCCTAATTACTGTG+GGG 0.690124 1:+78107084 MsG0180004444.01.T01:CDS
TTGTGACGATGAAGACGAGG+AGG 0.700668 1:-78101591 None:intergenic
CCGTTCCTCTCTCAAAACGA+CGG 0.716575 1:+78101559 MsG0180004444.01.T01:five_prime_UTR
AGGTTGGGGAATGAATGACA+GGG 0.722361 1:+78106602 MsG0180004444.01.T01:CDS
GGTTGGGGAATGAATGACAG+GGG 0.740649 1:+78106603 MsG0180004444.01.T01:CDS
ATCAGATTAGAAACCTACAG+AGG 0.757889 1:+78106511 MsG0180004444.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCCTTTAATTAAATTA+TGG + Chr1:78103916-78103935 MsG0180004444.01.T01:intron 10.0%
!! ATGATAATAATTGAAATTAA+GGG - Chr1:78101682-78101701 None:intergenic 10.0%
!! TATGATAATAATTGAAATTA+AGG - Chr1:78101683-78101702 None:intergenic 10.0%
!!! AAGAATTTTAAAAAAAGATA+AGG - Chr1:78105217-78105236 None:intergenic 10.0%
!!! AATTTTATCATTTCAAATAA+TGG - Chr1:78105374-78105393 None:intergenic 10.0%
!!! TGATTATAAAATTTTAGTTT+CGG + Chr1:78105601-78105620 MsG0180004444.01.T01:intron 10.0%
!!! TTTTTCTTATTGTATTATTT+CGG + Chr1:78102041-78102060 MsG0180004444.01.T01:intron 10.0%
!! CTCTTAATTTACATAATAAA+AGG - Chr1:78103888-78103907 None:intergenic 15.0%
!! CTTCAAAAAAAAAATATGAA+AGG + Chr1:78105924-78105943 MsG0180004444.01.T01:intron 15.0%
!! GATAAAAATAAGTGTAAAAT+AGG + Chr1:78105876-78105895 MsG0180004444.01.T01:intron 15.0%
!! TAAGAACGAAAATTAATTAT+GGG + Chr1:78105175-78105194 MsG0180004444.01.T01:intron 15.0%
!! TTAAGAACGAAAATTAATTA+TGG + Chr1:78105174-78105193 MsG0180004444.01.T01:intron 15.0%
!!! CTTTCATATTTTTTTTTTGA+AGG - Chr1:78105926-78105945 None:intergenic 15.0%
!!! CTTTTATTATGTAAATTAAG+AGG + Chr1:78103886-78103905 MsG0180004444.01.T01:intron 15.0%
!!! GATTATAAAATTTTAGTTTC+GGG + Chr1:78105602-78105621 MsG0180004444.01.T01:intron 15.0%
!!! TCTTTTTGAAATATCTTTTT+CGG + Chr1:78105272-78105291 MsG0180004444.01.T01:intron 15.0%
!!! TTGATTTGATTGATTTAATT+AGG - Chr1:78101425-78101444 None:intergenic 15.0%
!! AAATTACCACAAATCTTAAT+AGG - Chr1:78101922-78101941 None:intergenic 20.0%
!! AAGAACGAAAATTAATTATG+GGG + Chr1:78105176-78105195 MsG0180004444.01.T01:intron 20.0%
!! AAGTGCCATAATTTAATTAA+AGG - Chr1:78103924-78103943 None:intergenic 20.0%
!! AATAGTAAAAAATAGGCAAT+AGG - Chr1:78105716-78105735 None:intergenic 20.0%
!! ATGATGTTAGATTATCTAAA+TGG + Chr1:78103981-78104000 MsG0180004444.01.T01:intron 20.0%
!! CATCATAAAATCCATATATA+CGG - Chr1:78106356-78106375 None:intergenic 20.0%
!! GCTATTATTAGAAGAATAAA+AGG + Chr1:78103677-78103696 MsG0180004444.01.T01:intron 20.0%
!! TATAAAATAGATTTGATCTG+AGG + Chr1:78104766-78104785 MsG0180004444.01.T01:intron 20.0%
!! TCTAATTAACTTCAATTCAA+TGG - Chr1:78104195-78104214 None:intergenic 20.0%
!! TCTTGTCAATAGTAAAAAAT+AGG - Chr1:78105723-78105742 None:intergenic 20.0%
!! TGATGTTAGATTATCTAAAT+GGG + Chr1:78103982-78104001 MsG0180004444.01.T01:intron 20.0%
!! TGGATTATGTTCATATAAAT+GGG - Chr1:78106019-78106038 None:intergenic 20.0%
!! TTTAATTACATGTTACCATT+TGG + Chr1:78105504-78105523 MsG0180004444.01.T01:intron 20.0%
!! TTTATGTGATGAAAAAGATA+TGG + Chr1:78103951-78103970 MsG0180004444.01.T01:intron 20.0%
!!! AAAAAAACAAAGCTCAATTT+TGG + Chr1:78107184-78107203 MsG0180004444.01.T01:CDS 20.0%
!!! AATTTGCTAGTAAAATATGT+CGG - Chr1:78105073-78105092 None:intergenic 20.0%
!!! ATGGATTATGTTCATATAAA+TGG - Chr1:78106020-78106039 None:intergenic 20.0%
!!! TATACTATGTTTTTTTGTAG+AGG + Chr1:78104953-78104972 MsG0180004444.01.T01:intron 20.0%
!!! TTATTTTATATGCTAAGAGA+AGG - Chr1:78106278-78106297 None:intergenic 20.0%
! AACTCAAAATGATATCCAAA+TGG - Chr1:78105522-78105541 None:intergenic 25.0%
! AGAAGTAAGTAAAATAGTAC+AGG + Chr1:78103575-78103594 MsG0180004444.01.T01:intron 25.0%
! AGACGATATTAAAGAAGAAT+TGG - Chr1:78104800-78104819 None:intergenic 25.0%
! AGGTATTAACGATATTTACT+TGG + Chr1:78103697-78103716 MsG0180004444.01.T01:intron 25.0%
! ATGAACAAGTCAAATAACAT+AGG - Chr1:78103102-78103121 None:intergenic 25.0%
! CATACACAAAACTTAAATCA+CGG - Chr1:78102094-78102113 None:intergenic 25.0%
! GAAAATTAATTATGGGGTAT+TGG + Chr1:78105182-78105201 MsG0180004444.01.T01:intron 25.0%
! GAAGTAAGTAAAATAGTACA+GGG + Chr1:78103576-78103595 MsG0180004444.01.T01:intron 25.0%
! GACGATATTAAAGAAGAATT+GGG - Chr1:78104799-78104818 None:intergenic 25.0%
! TATCATTACCACATCATATT+TGG + Chr1:78106059-78106078 MsG0180004444.01.T01:intron 25.0%
! TCTTAAATCCAAATATGATG+TGG - Chr1:78106070-78106089 None:intergenic 25.0%
! TGAACAAGTCAAATAACATA+GGG - Chr1:78103101-78103120 None:intergenic 25.0%
! TGTTCATATAAATGGGTAAA+TGG - Chr1:78106012-78106031 None:intergenic 25.0%
! TTGAGTTTAAACTAGCAAAT+AGG + Chr1:78105535-78105554 MsG0180004444.01.T01:intron 25.0%
! TTTATGATGAGTGTAAAAGA+AGG + Chr1:78106367-78106386 MsG0180004444.01.T01:CDS 25.0%
!! ACAAAATCTTTTCATCAATG+AGG - Chr1:78106452-78106471 None:intergenic 25.0%
!! ATGTGGTAATGATAATAACA+AGG - Chr1:78106053-78106072 None:intergenic 25.0%
!! ATTTTCATATCACAGAAATG+GGG - Chr1:78106770-78106789 None:intergenic 25.0%
!! CAAAATCTTTTCATCAATGA+GGG - Chr1:78106451-78106470 None:intergenic 25.0%
!! CATTCATAAGTAACTTTTCA+AGG + Chr1:78105571-78105590 MsG0180004444.01.T01:intron 25.0%
!! CATTTTCATATCACAGAAAT+GGG - Chr1:78106771-78106790 None:intergenic 25.0%
!! GGAAAAGCATAAAAAGAAAA+AGG - Chr1:78104174-78104193 None:intergenic 25.0%
!! TAGAGAATTTTTCCTTGAAA+TGG + Chr1:78104483-78104502 MsG0180004444.01.T01:intron 25.0%
!! TCATTTTCATATCACAGAAA+TGG - Chr1:78106772-78106791 None:intergenic 25.0%
!! TGATTGATTTAATTAGGTCA+CGG - Chr1:78101419-78101438 None:intergenic 25.0%
!! TTATCATATGACATTTTGCT+TGG + Chr1:78102016-78102035 MsG0180004444.01.T01:intron 25.0%
!!! CTGAGAATTTTTTTCTTTTG+CGG + Chr1:78106304-78106323 MsG0180004444.01.T01:CDS 25.0%
!!! TAAAATTTTAGTTTCGGGAA+TGG + Chr1:78105607-78105626 MsG0180004444.01.T01:intron 25.0%
!!! TATCCTTTTGTTGATTTTTC+AGG + Chr1:78106126-78106145 MsG0180004444.01.T01:intron 25.0%
!!! TGAGAATTTTTTTCTTTTGC+GGG + Chr1:78106305-78106324 MsG0180004444.01.T01:CDS 25.0%
!!! TTCATTTGGTTTTTGTTGAA+GGG - Chr1:78101483-78101502 None:intergenic 25.0%
!!! TTTCAATGAGTTTTGATTGT+GGG + Chr1:78102663-78102682 MsG0180004444.01.T01:intron 25.0%
!!! TTTCATTTGGTTTTTGTTGA+AGG - Chr1:78101484-78101503 None:intergenic 25.0%
!!! TTTGAAGTATTGCTAATAGA+AGG + Chr1:78105630-78105649 MsG0180004444.01.T01:intron 25.0%
!!! TTTTCAATGAGTTTTGATTG+TGG + Chr1:78102662-78102681 MsG0180004444.01.T01:intron 25.0%
AAAATATTGTTACAAGCTGC+CGG - Chr1:78107066-78107085 None:intergenic 30.0%
AACAAATATGACCCATTTCA+AGG - Chr1:78104588-78104607 None:intergenic 30.0%
AACCGGAACTTAAAAGATAA+AGG - Chr1:78104294-78104313 None:intergenic 30.0%
AAGCAACCTTTCATATTGTT+GGG - Chr1:78105903-78105922 None:intergenic 30.0%
AAGTTATCTCATCCAATGTT+AGG - Chr1:78105019-78105038 None:intergenic 30.0%
ACCAATTTACTGTCACATTT+GGG - Chr1:78104331-78104350 None:intergenic 30.0%
AGTTGTTAAAAGCCTAACAT+TGG + Chr1:78105004-78105023 MsG0180004444.01.T01:intron 30.0%
AGTTTAAACTAGCAAATAGG+AGG + Chr1:78105538-78105557 MsG0180004444.01.T01:intron 30.0%
ATAACAAGGACTTCAATAGA+TGG - Chr1:78106039-78106058 None:intergenic 30.0%
ATGATTTCGTGTTTCAACAT+GGG + Chr1:78101978-78101997 MsG0180004444.01.T01:intron 30.0%
ATTCCTTTATCTTGAGTTTG+TGG + Chr1:78103637-78103656 MsG0180004444.01.T01:intron 30.0%
ATTGTTACTCTTAGATTCCA+AGG + Chr1:78104876-78104895 MsG0180004444.01.T01:intron 30.0%
ATTTCAAGCATTCCATTTCA+AGG - Chr1:78104498-78104517 None:intergenic 30.0%
CAAATTAGCAATGACCAAAT+AGG + Chr1:78105087-78105106 MsG0180004444.01.T01:intron 30.0%
CATAATAAAAGGTCACATCA+AGG - Chr1:78103877-78103896 None:intergenic 30.0%
CATCATAAACAGCTGATAAA+TGG - Chr1:78106916-78106935 None:intergenic 30.0%
CGCAAAAGAAAAAAATTCTC+AGG - Chr1:78106306-78106325 None:intergenic 30.0%
CTGGAATCAGTTGTATAAAA+AGG + Chr1:78103549-78103568 MsG0180004444.01.T01:intron 30.0%
GAACAAGTCAAATAACATAG+GGG - Chr1:78103100-78103119 None:intergenic 30.0%
GCTTCTATTAACCGTATATA+TGG + Chr1:78106342-78106361 MsG0180004444.01.T01:CDS 30.0%
GTAAAAGAAGGTTCAATGTA+AGG + Chr1:78106379-78106398 MsG0180004444.01.T01:CDS 30.0%
GTTTAAACTAGCAAATAGGA+GGG + Chr1:78105539-78105558 MsG0180004444.01.T01:intron 30.0%
TAAACACTTGTGTTGTAGTA+AGG - Chr1:78102754-78102773 None:intergenic 30.0%
TACCAATTTACTGTCACATT+TGG - Chr1:78104332-78104351 None:intergenic 30.0%
TATAAAAACCTAGTTGACCA+TGG - Chr1:78104937-78104956 None:intergenic 30.0%
TGACATAGGAAGTAAGAAAT+AGG - Chr1:78102831-78102850 None:intergenic 30.0%
TGATCCAAATTATGTAAGTC+AGG - Chr1:78106495-78106514 None:intergenic 30.0%
TTACAAGTTAGTTAGAGAAG+TGG + Chr1:78103720-78103739 MsG0180004444.01.T01:intron 30.0%
TTCCTTTATCTTGAGTTTGT+GGG + Chr1:78103638-78103657 MsG0180004444.01.T01:intron 30.0%
TTCTCCTGACTTACATAATT+TGG + Chr1:78106488-78106507 MsG0180004444.01.T01:CDS 30.0%
! ATAATTATCTTTTGACCAGG+TGG + Chr1:78107012-78107031 MsG0180004444.01.T01:intron 30.0%
! ATGGGTCATATTTGTTAAAC+TGG + Chr1:78104592-78104611 MsG0180004444.01.T01:intron 30.0%
! CATGTTTGAAGTTTAAACCT+TGG - Chr1:78104896-78104915 None:intergenic 30.0%
! GACAACACCTTACAATTTTA+GGG - Chr1:78105421-78105440 None:intergenic 30.0%
! GCAGCTTGTAACAATATTTT+CGG + Chr1:78107066-78107085 MsG0180004444.01.T01:CDS 30.0%
! TCTTTTCTTTTCTCTGTATC+AGG + Chr1:78102175-78102194 MsG0180004444.01.T01:intron 30.0%
! TGACAACACCTTACAATTTT+AGG - Chr1:78105422-78105441 None:intergenic 30.0%
! TGCATAATTATCTTTTGACC+AGG + Chr1:78107009-78107028 MsG0180004444.01.T01:intron 30.0%
! TGTCAAAACAATTTTGCTCA+AGG - Chr1:78104729-78104748 None:intergenic 30.0%
!! AGGTTCTGTTTCTGAATATT+GGG + Chr1:78104372-78104391 MsG0180004444.01.T01:intron 30.0%
!! ATATACATTTGGTGCTGATA+AGG + Chr1:78106632-78106651 MsG0180004444.01.T01:CDS 30.0%
!! TAGTGTTTTGTTGAGATTGA+AGG + Chr1:78104536-78104555 MsG0180004444.01.T01:intron 30.0%
!! TATCAGCTGGCTTTAATATT+TGG - Chr1:78107165-78107184 None:intergenic 30.0%
!!! AGCTTTGTTTTTTTATCAGC+TGG - Chr1:78107178-78107197 None:intergenic 30.0%
!!! AGTTTGTTTTGGGTTTCATT+TGG - Chr1:78101497-78101516 None:intergenic 30.0%
!!! ATTTTGACTGAAGATAGAGA+AGG - Chr1:78104135-78104154 None:intergenic 30.0%
!!! CTCCTTTATCTTTTAAGTTC+CGG + Chr1:78104289-78104308 MsG0180004444.01.T01:intron 30.0%
!!! GAGAATTTTTTTCTTTTGCG+GGG + Chr1:78106306-78106325 MsG0180004444.01.T01:CDS 30.0%
!!! TGTTATTTTTCAGCTACAGA+GGG + Chr1:78104238-78104257 MsG0180004444.01.T01:intron 30.0%
!!! TTACAATTTTAGGGCCAAAA+CGG - Chr1:78105412-78105431 None:intergenic 30.0%
AAAGTTTAACCTGATGAGCA+CGG - Chr1:78106698-78106717 None:intergenic 35.0%
AACCTTGAACTTCTTTGCTA+GGG - Chr1:78106587-78106606 None:intergenic 35.0%
ACAACACAAGTGTTTATCGA+TGG + Chr1:78102758-78102777 MsG0180004444.01.T01:intron 35.0%
AGCAACATATTGAGAACCAA+AGG - Chr1:78106723-78106742 None:intergenic 35.0%
AGGAAGGATCAAATTCTGTA+AGG + Chr1:78103045-78103064 MsG0180004444.01.T01:intron 35.0%
AGTGTCTTAGTGAAGTTTGT+GGG + Chr1:78102124-78102143 MsG0180004444.01.T01:intron 35.0%
AGTTTCACTATACGCCTATT+TGG - Chr1:78105104-78105123 None:intergenic 35.0%
ATAGGACCCAACAATATGAA+AGG + Chr1:78105894-78105913 MsG0180004444.01.T01:intron 35.0%
ATCACCCAAAAACAAGTAGT+TGG - Chr1:78106217-78106236 None:intergenic 35.0%
ATCAGATTAGAAACCTACAG+AGG + Chr1:78106511-78106530 MsG0180004444.01.T01:CDS 35.0%
ATCTGATATATCCTTGTGCA+CGG + Chr1:78105955-78105974 MsG0180004444.01.T01:intron 35.0%
ATGTGACAGTAAATTGGTAC+AGG + Chr1:78104333-78104352 MsG0180004444.01.T01:intron 35.0%
CAAAGTTGAATCAGTCTAGA+TGG + Chr1:78105139-78105158 MsG0180004444.01.T01:intron 35.0%
CAAGAGAAGTTGTGTGAAAT+TGG + Chr1:78104456-78104475 MsG0180004444.01.T01:intron 35.0%
CAATCCTAATCTTTCTCTCA+GGG + Chr1:78106805-78106824 MsG0180004444.01.T01:intron 35.0%
CATAGGGGAGTTATTCTAAA+CGG - Chr1:78103085-78103104 None:intergenic 35.0%
CATGATTTCGTGTTTCAACA+TGG + Chr1:78101977-78101996 MsG0180004444.01.T01:intron 35.0%
CTTGCAGCAACCTAATTTAT+TGG + Chr1:78101885-78101904 MsG0180004444.01.T01:CDS 35.0%
GAAGCAACCTTTCATATTGT+TGG - Chr1:78105904-78105923 None:intergenic 35.0%
GAAGGTTCAATGTAAGGATA+TGG + Chr1:78106385-78106404 MsG0180004444.01.T01:CDS 35.0%
GAATATGGAGATGAGAGAAA+TGG + Chr1:78103022-78103041 MsG0180004444.01.T01:intron 35.0%
GATATGAGTTCTTTGCTAAC+CGG + Chr1:78107044-78107063 MsG0180004444.01.T01:CDS 35.0%
GATGAAGTTCCAGATTTCAA+AGG + Chr1:78103524-78103543 MsG0180004444.01.T01:intron 35.0%
GCTTCAAGCTCCAATAAATT+AGG - Chr1:78101898-78101917 None:intergenic 35.0%
GCTTTCCAACCATGAAAAAT+CGG - Chr1:78102809-78102828 None:intergenic 35.0%
GGTATAAAATCGAAGAAGAG+TGG - Chr1:78101661-78101680 None:intergenic 35.0%
GTCAGTATTCTGATCTTCTA+AGG + Chr1:78106160-78106179 MsG0180004444.01.T01:CDS 35.0%
GTTCAATGTAAGGATATGGA+AGG + Chr1:78106389-78106408 MsG0180004444.01.T01:CDS 35.0%
TAAACCTCAGTTGTCAATAG+CGG + Chr1:78102400-78102419 MsG0180004444.01.T01:intron 35.0%
TAGCAAAGAAGTTCAAGGTT+GGG + Chr1:78106587-78106606 MsG0180004444.01.T01:CDS 35.0%
TAGTAAAATATGTCGGCAGA+TGG - Chr1:78105066-78105085 None:intergenic 35.0%
TCAAGATAAAGGAATCCTTC+AGG - Chr1:78103632-78103651 None:intergenic 35.0%
TCATCTCCATATTCTTGGAA+AGG - Chr1:78103016-78103035 None:intergenic 35.0%
TCGCCTGAAAAATCAACAAA+AGG - Chr1:78106132-78106151 None:intergenic 35.0%
TCTTACTTCCTATGTCAAGT+AGG + Chr1:78102834-78102853 MsG0180004444.01.T01:intron 35.0%
TGAACAACTGGGAAAAATGA+TGG + Chr1:78104852-78104871 MsG0180004444.01.T01:intron 35.0%
TGATTTAATTAGGTCACGGA+AGG - Chr1:78101415-78101434 None:intergenic 35.0%
TGCAAAGCTAAAATCTGTGT+TGG - Chr1:78103211-78103230 None:intergenic 35.0%
TGCTTTGATAAGTTGCTAGT+TGG + Chr1:78102222-78102241 MsG0180004444.01.T01:intron 35.0%
TTAGATTATCTAAATGGGCG+AGG + Chr1:78103987-78104006 MsG0180004444.01.T01:intron 35.0%
TTCGTTTCAGTGGAATGAAA+GGG - Chr1:78101452-78101471 None:intergenic 35.0%
TTCTCTCATCTCCATATTCT+TGG - Chr1:78103021-78103040 None:intergenic 35.0%
TTTCGTTTCAGTGGAATGAA+AGG - Chr1:78101453-78101472 None:intergenic 35.0%
! AAATCTGAAACTTGCTCAAG+GGG + Chr1:78105746-78105765 MsG0180004444.01.T01:intron 35.0%
! AAGATAGAGAAGGCATGAAA+AGG - Chr1:78104125-78104144 None:intergenic 35.0%
! AGATAGAGAAGGCATGAAAA+GGG - Chr1:78104124-78104143 None:intergenic 35.0%
! AGCTGATAAATGGACTTGAA+CGG - Chr1:78106906-78106925 None:intergenic 35.0%
! AGTGTAGACTGTTTGTTTCT+AGG + Chr1:78104398-78104417 MsG0180004444.01.T01:intron 35.0%
! CAAATCTGAAACTTGCTCAA+GGG + Chr1:78105745-78105764 MsG0180004444.01.T01:intron 35.0%
! CAACCATGAAAAATCGGTTT+AGG - Chr1:78102803-78102822 None:intergenic 35.0%
! CATCTAGACTGATTCAACTT+TGG - Chr1:78105141-78105160 None:intergenic 35.0%
! GAAAAGATTTTGTGCATGCA+TGG + Chr1:78106459-78106478 MsG0180004444.01.T01:CDS 35.0%
! GAAGCACCTATTAAGATTTG+TGG + Chr1:78101913-78101932 MsG0180004444.01.T01:CDS 35.0%
! GGTTAATAGAAGCACATTCA+TGG - Chr1:78106335-78106354 None:intergenic 35.0%
! GTTTACGGAGTCAGAATTTT+GGG - Chr1:78101527-78101546 None:intergenic 35.0%
! GTTTCAAGTGTCCTTGAAAT+GGG + Chr1:78104574-78104593 MsG0180004444.01.T01:intron 35.0%
! GTTTCTTCAGAAGCATGATT+TGG + Chr1:78106662-78106681 MsG0180004444.01.T01:CDS 35.0%
! TCAAATCTGAAACTTGCTCA+AGG + Chr1:78105744-78105763 MsG0180004444.01.T01:intron 35.0%
! TCAGGTTAAACTTTTGCCTT+TGG + Chr1:78106704-78106723 MsG0180004444.01.T01:intron 35.0%
! TGGTCAATTGATTTCACCTT+GGG - Chr1:78104036-78104055 None:intergenic 35.0%
! TGTTTCAAGTGTCCTTGAAA+TGG + Chr1:78104573-78104592 MsG0180004444.01.T01:intron 35.0%
! TTCGGTATTTTGTACATGTC+TGG + Chr1:78102059-78102078 MsG0180004444.01.T01:intron 35.0%
! TTGGTTCTCAATATGTTGCT+GGG + Chr1:78106723-78106742 MsG0180004444.01.T01:intron 35.0%
! TTGTTTGTGTTTTGCAGAGA+TGG + Chr1:78101741-78101760 MsG0180004444.01.T01:intron 35.0%
!! AAGGTGAAAGTATTTGTGGT+TGG - Chr1:78103858-78103877 None:intergenic 35.0%
!! ATTCCAGATCCTTTGAAATC+TGG - Chr1:78103536-78103555 None:intergenic 35.0%
!! CATCAAGGTGAAAGTATTTG+TGG - Chr1:78103862-78103881 None:intergenic 35.0%
!! CTAAACCGATTTTTCATGGT+TGG + Chr1:78102801-78102820 MsG0180004444.01.T01:intron 35.0%
!! GAGGTTCTGTTTCTGAATAT+TGG + Chr1:78104371-78104390 MsG0180004444.01.T01:intron 35.0%
!! GTTTTGGCCCTAAAATTGTA+AGG + Chr1:78105411-78105430 MsG0180004444.01.T01:intron 35.0%
!! TTGGTTTTTGTTGAAGGGAA+GGG - Chr1:78101478-78101497 None:intergenic 35.0%
!! TTTGGTTCTCAATATGTTGC+TGG + Chr1:78106722-78106741 MsG0180004444.01.T01:intron 35.0%
!!! CTTCTAAGGCTTTTTGAGTA+TGG + Chr1:78106174-78106193 MsG0180004444.01.T01:CDS 35.0%
!!! CTTGTTTTTGGGTGATTATG+TGG + Chr1:78106221-78106240 MsG0180004444.01.T01:CDS 35.0%
!!! GTGTTATTTTTCAGCTACAG+AGG + Chr1:78104237-78104256 MsG0180004444.01.T01:intron 35.0%
!!! TTTGGTTTTTGTTGAAGGGA+AGG - Chr1:78101479-78101498 None:intergenic 35.0%
AACAAAGTTGGGTGATGACT+TGG + Chr1:78105301-78105320 MsG0180004444.01.T01:intron 40.0%
ACCTGGGTGAACCTATTTAA+AGG + Chr1:78105679-78105698 MsG0180004444.01.T01:intron 40.0%
ACTATCAGAGAAAAGGTGAG+AGG - Chr1:78103303-78103322 None:intergenic 40.0%
AGAGAGCTGTCCCTTTAAAT+AGG - Chr1:78105693-78105712 None:intergenic 40.0%
AGAGTTTCCTGGTTTAGTAG+TGG - Chr1:78107218-78107237 None:intergenic 40.0%
AGCAAAGAAGTTCAAGGTTG+GGG + Chr1:78106588-78106607 MsG0180004444.01.T01:CDS 40.0%
AGGAAGGTTTCAGCTTTCAA+TGG - Chr1:78104092-78104111 None:intergenic 40.0%
AGTTAGTTAGAGAAGTGGCT+AGG + Chr1:78103725-78103744 MsG0180004444.01.T01:intron 40.0%
ATAATCCAAACTCAGCCTGA+AGG + Chr1:78103614-78103633 MsG0180004444.01.T01:intron 40.0%
ATCACGGGGATAAACATGTT+GGG + Chr1:78102496-78102515 MsG0180004444.01.T01:intron 40.0%
ATGACCCTGAGAGAAAGATT+AGG - Chr1:78106812-78106831 None:intergenic 40.0%
CAAACCTCTGATGTCAATAG+TGG + Chr1:78102265-78102284 MsG0180004444.01.T01:intron 40.0%
CAACCTTGAACTTCTTTGCT+AGG - Chr1:78106588-78106607 None:intergenic 40.0%
CAATTCTTCGATCGCAATAC+AGG - Chr1:78106955-78106974 None:intergenic 40.0%
CAATTGACCAGATACTGTTG+TGG + Chr1:78104046-78104065 MsG0180004444.01.T01:intron 40.0%
CCAATCTTTGTGCCTCAAAT+CGG + Chr1:78103328-78103347 MsG0180004444.01.T01:intron 40.0%
CCTGGGTGAACCTATTTAAA+GGG + Chr1:78105680-78105699 MsG0180004444.01.T01:intron 40.0%
CTAGCAAAGAAGTTCAAGGT+TGG + Chr1:78106586-78106605 MsG0180004444.01.T01:CDS 40.0%
CTCCCACAAACTCAAGATAA+AGG - Chr1:78103643-78103662 None:intergenic 40.0%
CTTCCTCCTTTCCAAGAATA+TGG + Chr1:78103007-78103026 MsG0180004444.01.T01:intron 40.0%
GAGTGTCTTAGTGAAGTTTG+TGG + Chr1:78102123-78102142 MsG0180004444.01.T01:intron 40.0%
GATAAACATGTTGGGTTTCG+TGG + Chr1:78102504-78102523 MsG0180004444.01.T01:intron 40.0%
GCAATCCTAATCTTTCTCTC+AGG + Chr1:78106804-78106823 MsG0180004444.01.T01:intron 40.0%
GCCCAAATGTGACAGTAAAT+TGG + Chr1:78104327-78104346 MsG0180004444.01.T01:intron 40.0%
GCTTCTACAATGAACAAGCT+GGG + Chr1:78102859-78102878 MsG0180004444.01.T01:intron 40.0%
GGAGGTTACTATCAGAGAAA+AGG - Chr1:78103310-78103329 None:intergenic 40.0%
GTCACTATGATCAAGACCAA+CGG + Chr1:78105782-78105801 MsG0180004444.01.T01:intron 40.0%
GTTAAAATGAGGGAAGGTCA+TGG - Chr1:78103138-78103157 None:intergenic 40.0%
GTTCCAGATTTCAAAGGATC+TGG + Chr1:78103530-78103549 MsG0180004444.01.T01:intron 40.0%
TAAGACAGCAACACCAACAT+GGG - Chr1:78103243-78103262 None:intergenic 40.0%
TACTTCCTATGTCAAGTAGG+TGG + Chr1:78102837-78102856 MsG0180004444.01.T01:intron 40.0%
TAGCAGTAGAACATAGCTGA+CGG - Chr1:78101855-78101874 None:intergenic 40.0%
TATGGAGATGAGAGAAATGG+AGG + Chr1:78103025-78103044 MsG0180004444.01.T01:intron 40.0%
TCAAACTCCCCACAGTAATT+AGG - Chr1:78107094-78107113 None:intergenic 40.0%
TCACTATGATCAAGACCAAC+GGG + Chr1:78105783-78105802 MsG0180004444.01.T01:intron 40.0%
TCGTTTCAGTGGAATGAAAG+GGG - Chr1:78101451-78101470 None:intergenic 40.0%
TCTCCATATTCTTGGAAAGG+AGG - Chr1:78103013-78103032 None:intergenic 40.0%
TGACACACATTTATGCACTG+AGG + Chr1:78106870-78106889 MsG0180004444.01.T01:intron 40.0%
TTAATTAGGTCACGGAAGGA+AGG - Chr1:78101411-78101430 None:intergenic 40.0%
TTCGGTTGCACAACAAAGTT+GGG + Chr1:78105290-78105309 MsG0180004444.01.T01:intron 40.0%
TTGCTGAGATGGATAAGTAG+AGG - Chr1:78103413-78103432 None:intergenic 40.0%
TTTCACCTTGGGTCATTAGT+TGG - Chr1:78104025-78104044 None:intergenic 40.0%
TTTCAGCTACAGAGGGATAA+GGG + Chr1:78104245-78104264 MsG0180004444.01.T01:intron 40.0%
TTTCGGTTGCACAACAAAGT+TGG + Chr1:78105289-78105308 MsG0180004444.01.T01:intron 40.0%
! AAAAACAAGTAGTTGGCCTG+AGG - Chr1:78106210-78106229 None:intergenic 40.0%
! AAGATTTTGTGCATGCATGG+CGG + Chr1:78106462-78106481 MsG0180004444.01.T01:CDS 40.0%
! AGAGATGGAACAAGCAGTTT+TGG + Chr1:78101756-78101775 MsG0180004444.01.T01:intron 40.0%
! ATTATCTTTTGACCAGGTGG+TGG + Chr1:78107015-78107034 MsG0180004444.01.T01:intron 40.0%
! ATTTGAGGCACAAAGATTGG+AGG - Chr1:78103328-78103347 None:intergenic 40.0%
! CATGAAAAATCGGTTTAGGC+GGG - Chr1:78102799-78102818 None:intergenic 40.0%
! CCATGAAAAATCGGTTTAGG+CGG - Chr1:78102800-78102819 None:intergenic 40.0%
! CCATGTTTTGCGTATGTGTT+CGG + Chr1:78104215-78104234 MsG0180004444.01.T01:intron 40.0%
! CTGGTCAATTGATTTCACCT+TGG - Chr1:78104037-78104056 None:intergenic 40.0%
! GATGTCAGAGTGGATTCATT+CGG - Chr1:78102890-78102909 None:intergenic 40.0%
! GGTTTACGGAGTCAGAATTT+TGG - Chr1:78101528-78101547 None:intergenic 40.0%
! TGGTCTTGATCATAGTGACA+AGG - Chr1:78105781-78105800 None:intergenic 40.0%
! TTTTCAGCTACAGAGGGATA+AGG + Chr1:78104244-78104263 MsG0180004444.01.T01:intron 40.0%
!! AAAGGAGGAAGCTCTAAAGA+CGG - Chr1:78102998-78103017 None:intergenic 40.0%
!! AGGGGAGTGTCATATACATT+TGG + Chr1:78106621-78106640 MsG0180004444.01.T01:CDS 40.0%
!! CAGGCCAACTACTTGTTTTT+GGG + Chr1:78106210-78106229 MsG0180004444.01.T01:CDS 40.0%
!! TCAGGCCAACTACTTGTTTT+TGG + Chr1:78106209-78106228 MsG0180004444.01.T01:CDS 40.0%
!!! CTAAGGCTTTTTGAGTATGG+TGG + Chr1:78106177-78106196 MsG0180004444.01.T01:CDS 40.0%
!!! GATTTTTCAGGCGACATACA+TGG + Chr1:78106138-78106157 MsG0180004444.01.T01:intron 40.0%
!!! GGGCATTCGTAGTTTGTTTT+GGG - Chr1:78101507-78101526 None:intergenic 40.0%
!!! TGGGCATTCGTAGTTTGTTT+TGG - Chr1:78101508-78101527 None:intergenic 40.0%
AAAAGGGCAAAAGGCTAGGA+AGG - Chr1:78104108-78104127 None:intergenic 45.0%
AAACATGTTGGGTTTCGTGG+TGG + Chr1:78102507-78102526 MsG0180004444.01.T01:intron 45.0%
AAACTCTCCAGCAGGTGTAA+AGG + Chr1:78107231-78107250 MsG0180004444.01.T01:CDS 45.0%
AAATTGGTACAGGCCCTGTA+TGG + Chr1:78104343-78104362 MsG0180004444.01.T01:intron 45.0%
AAGGTTGGGGAATGAATGAC+AGG + Chr1:78106601-78106620 MsG0180004444.01.T01:CDS 45.0%
AATGCATCCTTCTGCATCCA+TGG + Chr1:78104917-78104936 MsG0180004444.01.T01:intron 45.0%
ACAAGTGTTTATCGATGGCC+AGG + Chr1:78102763-78102782 MsG0180004444.01.T01:intron 45.0%
ACAGCCACTATTGACATCAG+AGG - Chr1:78102272-78102291 None:intergenic 45.0%
AGAACCTCCATGTCCATACA+GGG - Chr1:78104359-78104378 None:intergenic 45.0%
AGAAGCCACCTACTTGACAT+AGG - Chr1:78102845-78102864 None:intergenic 45.0%
AGAGGACAGAGAGTAGTCTT+AGG - Chr1:78103395-78103414 None:intergenic 45.0%
AGGTTGGGGAATGAATGACA+GGG + Chr1:78106602-78106621 MsG0180004444.01.T01:CDS 45.0%
AGTACGACCACTACTAAACC+AGG + Chr1:78107208-78107227 MsG0180004444.01.T01:CDS 45.0%
ATCAACATGAGCTTGCGGTT+TGG - Chr1:78103277-78103296 None:intergenic 45.0%
ATCACGGGGAGAAATGCATT+GGG + Chr1:78102361-78102380 MsG0180004444.01.T01:intron 45.0%
ATCTTTGTGCCTCAAATCGG+TGG + Chr1:78103331-78103350 MsG0180004444.01.T01:intron 45.0%
ATGCTTTAGCCAGTTAAGCC+AGG + Chr1:78104821-78104840 MsG0180004444.01.T01:intron 45.0%
ATGTCAATAGTGGCTGTGAG+CGG + Chr1:78102275-78102294 MsG0180004444.01.T01:intron 45.0%
CAACATGTTTATCCCCGTGA+TGG - Chr1:78102497-78102516 None:intergenic 45.0%
CACTATGATCAAGACCAACG+GGG + Chr1:78105784-78105803 MsG0180004444.01.T01:intron 45.0%
CATCACGGGGATAAACATGT+TGG + Chr1:78102495-78102514 MsG0180004444.01.T01:intron 45.0%
CATGAAAAGGGCAAAAGGCT+AGG - Chr1:78104112-78104131 None:intergenic 45.0%
CCCTTTAAATAGGTTCACCC+AGG - Chr1:78105683-78105702 None:intergenic 45.0%
CCGAACACATACGCAAAACA+TGG - Chr1:78104218-78104237 None:intergenic 45.0%
CGAAGAAGAGTGGAAGAAGT+GGG - Chr1:78101651-78101670 None:intergenic 45.0%
CGACTCTACACTCGGATAAA+AGG - Chr1:78105659-78105678 None:intergenic 45.0%
CGTTTCAGTGGAATGAAAGG+GGG - Chr1:78101450-78101469 None:intergenic 45.0%
CTAAGACAGCAACACCAACA+TGG - Chr1:78103244-78103263 None:intergenic 45.0%
CTCAAATCGGTGGTAAAGAG+AGG + Chr1:78103341-78103360 MsG0180004444.01.T01:intron 45.0%
CTGAGGGGCAGTTAAAATGA+GGG - Chr1:78103148-78103167 None:intergenic 45.0%
GACCCTAGCAAAGAAGTTCA+AGG + Chr1:78106582-78106601 MsG0180004444.01.T01:CDS 45.0%
GAGAAATGCATTGGGTTTCG+TGG + Chr1:78102369-78102388 MsG0180004444.01.T01:intron 45.0%
GAGAGGCTTCGTTGTCAATT+CGG + Chr1:78103358-78103377 MsG0180004444.01.T01:intron 45.0%
GAGATGAGAGAAATGGAGGA+AGG + Chr1:78103029-78103048 MsG0180004444.01.T01:intron 45.0%
GGAACATCAACATGAGCTTG+CGG - Chr1:78103282-78103301 None:intergenic 45.0%
GGAAGGGAATTTCGTTTCAG+TGG - Chr1:78101462-78101481 None:intergenic 45.0%
GGCTTCTACAATGAACAAGC+TGG + Chr1:78102858-78102877 MsG0180004444.01.T01:intron 45.0%
GTGCTAACACTGTGTTTCGT+GGG + Chr1:78103492-78103511 MsG0180004444.01.T01:intron 45.0%
TAACACTGTGTTTCGTGGGA+GGG + Chr1:78103496-78103515 MsG0180004444.01.T01:intron 45.0%
TAGTTGACCATGGATGCAGA+AGG - Chr1:78104927-78104946 None:intergenic 45.0%
TCAACATGAGCTTGCGGTTT+GGG - Chr1:78103276-78103295 None:intergenic 45.0%
TCGAAGAAGAGTGGAAGAAG+TGG - Chr1:78101652-78101671 None:intergenic 45.0%
TCGCAAAGCAAACCTGTATC+AGG - Chr1:78106549-78106568 None:intergenic 45.0%
TGATTGTGACGATGAAGACG+AGG - Chr1:78101597-78101616 None:intergenic 45.0%
TGCAGTGATTAAGCCCATGT+TGG + Chr1:78103227-78103246 MsG0180004444.01.T01:intron 45.0%
TGCTGAAGTGAAATAGCCGA+GGG - Chr1:78102944-78102963 None:intergenic 45.0%
TGCTTTAGCCAGTTAAGCCA+GGG + Chr1:78104822-78104841 MsG0180004444.01.T01:intron 45.0%
TGGGTGATTATGTGGATCGA+GGG + Chr1:78106229-78106248 MsG0180004444.01.T01:CDS 45.0%
TGTGCTAACACTGTGTTTCG+TGG + Chr1:78103491-78103510 MsG0180004444.01.T01:intron 45.0%
TGTTGCCAACTAATGACCCA+AGG + Chr1:78104017-78104036 MsG0180004444.01.T01:intron 45.0%
TTCTGCATCCATGGTCAACT+AGG + Chr1:78104926-78104945 MsG0180004444.01.T01:intron 45.0%
TTGAGTTTGTGGGAGCTGTA+GGG + Chr1:78103648-78103667 MsG0180004444.01.T01:intron 45.0%
TTGCTTCAATTGCCTACCTG+TGG + Chr1:78106422-78106441 MsG0180004444.01.T01:CDS 45.0%
TTGGGTGATTATGTGGATCG+AGG + Chr1:78106228-78106247 MsG0180004444.01.T01:CDS 45.0%
TTTCGGCGCCTAATTACTGT+GGG + Chr1:78107083-78107102 MsG0180004444.01.T01:CDS 45.0%
! AGGGTTGGCATTGAACAACT+GGG + Chr1:78104841-78104860 MsG0180004444.01.T01:intron 45.0%
! CCGATTTGAGGCACAAAGAT+TGG - Chr1:78103331-78103350 None:intergenic 45.0%
! CTAAAGACGGGGATTAGTGA+GGG - Chr1:78102985-78103004 None:intergenic 45.0%
! GAAGGCATGAAAAGGGCAAA+AGG - Chr1:78104117-78104136 None:intergenic 45.0%
! TAACGAGTGAAGCTCCGTTT+TGG + Chr1:78105395-78105414 MsG0180004444.01.T01:intron 45.0%
! TCTAAAGACGGGGATTAGTG+AGG - Chr1:78102986-78103005 None:intergenic 45.0%
! TCTTATTTGCCGTGCTCATC+AGG + Chr1:78106686-78106705 MsG0180004444.01.T01:CDS 45.0%
! TTTTCGGCGCCTAATTACTG+TGG + Chr1:78107082-78107101 MsG0180004444.01.T01:CDS 45.0%
!! AAGGAGGAAGCTCTAAAGAC+GGG - Chr1:78102997-78103016 None:intergenic 45.0%
!! CCGCCTAAACCGATTTTTCA+TGG + Chr1:78102797-78102816 MsG0180004444.01.T01:intron 45.0%
!! CGGTGTCGTTTAGAGGTTTA+CGG - Chr1:78101542-78101561 None:intergenic 45.0%
!! CTCTCTTTACCACCGATTTG+AGG - Chr1:78103343-78103362 None:intergenic 45.0%
!! TAGTGGTTCTGATGTCAGAG+TGG - Chr1:78102900-78102919 None:intergenic 45.0%
!!! AAACACCGTCGTTTTGAGAG+AGG - Chr1:78101567-78101586 None:intergenic 45.0%
AAACCAGGAAACTCTCCAGC+AGG + Chr1:78107223-78107242 MsG0180004444.01.T01:CDS 50.0%
AATGCCAACCCTGGCTTAAC+TGG - Chr1:78104833-78104852 None:intergenic 50.0%
ACAGCCGCTATTGACAACTG+AGG - Chr1:78102407-78102426 None:intergenic 50.0%
ATAATGCACAGCCCCCAATC+GGG - Chr1:78103455-78103474 None:intergenic 50.0%
ATGAGGGAAGGTCATGGAAG+AGG - Chr1:78103132-78103151 None:intergenic 50.0%
CAATGCATTTCTCCCCGTGA+TGG - Chr1:78102362-78102381 None:intergenic 50.0%
CAGAACCTCCATGTCCATAC+AGG - Chr1:78104360-78104379 None:intergenic 50.0%
CAGTTGTTCAATGCCAACCC+TGG - Chr1:78104842-78104861 None:intergenic 50.0%
CATCACGGGGAGAAATGCAT+TGG + Chr1:78102360-78102379 MsG0180004444.01.T01:intron 50.0%
CATGTTTATCCCCGTGATGG+TGG - Chr1:78102494-78102513 None:intergenic 50.0%
CCAAAACAATGCCGTGCACA+AGG - Chr1:78105969-78105988 None:intergenic 50.0%
CCGTTCCTCTCTCAAAACGA+CGG + Chr1:78101559-78101578 MsG0180004444.01.T01:five_prime_UTR 50.0%
CCTGTATCAGGCACATCAGT+CGG - Chr1:78106537-78106556 None:intergenic 50.0%
CGTGTATCAGCCCTGCTTTA+GGG - Chr1:78102556-78102575 None:intergenic 50.0%
CTAACACTGTGTTTCGTGGG+AGG + Chr1:78103495-78103514 MsG0180004444.01.T01:intron 50.0%
CTACAGACGCTATACCCATC+CGG - Chr1:78102468-78102487 None:intergenic 50.0%
CTGCTGAAGTGAAATAGCCG+AGG - Chr1:78102945-78102964 None:intergenic 50.0%
CTTCCTACCTTTACACCTGC+TGG - Chr1:78107241-78107260 None:intergenic 50.0%
CTTGAGTTTGTGGGAGCTGT+AGG + Chr1:78103647-78103666 MsG0180004444.01.T01:intron 50.0%
GACCAGATACTGTTGTGGCA+TGG + Chr1:78104051-78104070 MsG0180004444.01.T01:intron 50.0%
GATAATGCACAGCCCCCAAT+CGG - Chr1:78103456-78103475 None:intergenic 50.0%
GATGGGTATAGCGTCTGTAG+CGG + Chr1:78102468-78102487 MsG0180004444.01.T01:intron 50.0%
GCTGAGGGGCAGTTAAAATG+AGG - Chr1:78103149-78103168 None:intergenic 50.0%
GGAATCCTTCAGGCTGAGTT+TGG - Chr1:78103622-78103641 None:intergenic 50.0%
GGGGCAGTTAAAATGAGGGA+AGG - Chr1:78103144-78103163 None:intergenic 50.0%
GGTTGGGGAATGAATGACAG+GGG + Chr1:78106603-78106622 MsG0180004444.01.T01:CDS 50.0%
GTTTGCTTTGCGATCTCCTC+TGG + Chr1:78106556-78106575 MsG0180004444.01.T01:CDS 50.0%
TAGGCGGGAAGATATTGTCC+TGG - Chr1:78102784-78102803 None:intergenic 50.0%
TCGTGTATCAGCCCTGCTTT+AGG - Chr1:78102557-78102576 None:intergenic 50.0%
TCTCCAGCAGGTGTAAAGGT+AGG + Chr1:78107235-78107254 MsG0180004444.01.T01:CDS 50.0%
TGAAGTGAAATAGCCGAGGG+AGG - Chr1:78102941-78102960 None:intergenic 50.0%
TGCCATGCCACAACAGTATC+TGG - Chr1:78104056-78104075 None:intergenic 50.0%
TTAGCCAGTTAAGCCAGGGT+TGG + Chr1:78104826-78104845 MsG0180004444.01.T01:intron 50.0%
TTCGGCGCCTAATTACTGTG+GGG + Chr1:78107084-78107103 MsG0180004444.01.T01:CDS 50.0%
TTGAAGTTCGTAGCCGTCCA+GGG + Chr1:78101800-78101819 MsG0180004444.01.T01:CDS 50.0%
TTGTCAATAGCGGCTGTGAG+CGG + Chr1:78102410-78102429 MsG0180004444.01.T01:intron 50.0%
TTGTGACGATGAAGACGAGG+AGG - Chr1:78101594-78101613 None:intergenic 50.0%
TTTGTGGGAGCTGTAGGGTT+GGG + Chr1:78103653-78103672 MsG0180004444.01.T01:intron 50.0%
! AACAAGTAGTTGGCCTGAGG+AGG - Chr1:78106207-78106226 None:intergenic 50.0%
! ATGTCGGCAGATGGCATTGA+AGG - Chr1:78105057-78105076 None:intergenic 50.0%
! CAGGGTTGGCATTGAACAAC+TGG + Chr1:78104840-78104859 MsG0180004444.01.T01:intron 50.0%
! CCTTGTGCACGGCATTGTTT+TGG + Chr1:78105966-78105985 MsG0180004444.01.T01:intron 50.0%
! GTTCCGGTTTTCTACCTCAC+AGG + Chr1:78104305-78104324 MsG0180004444.01.T01:intron 50.0%
!! AGAGGAACGGTGTCGTTTAG+AGG - Chr1:78101549-78101568 None:intergenic 50.0%
!! AGGAGGAAGCTCTAAAGACG+GGG - Chr1:78102996-78103015 None:intergenic 50.0%
!! ATCTTTTGACCAGGTGGTGG+AGG + Chr1:78107018-78107037 MsG0180004444.01.T01:intron 50.0%
!! GGGTGATGACTTGGTGATTG+AGG + Chr1:78105310-78105329 MsG0180004444.01.T01:intron 50.0%
!! GTATGGTGGATTACCTCCTC+AGG + Chr1:78106191-78106210 MsG0180004444.01.T01:CDS 50.0%
!! TCTGCAGTCTTGAGTGCTGA+GGG - Chr1:78103164-78103183 None:intergenic 50.0%
!!! CCGTCGTTTTGAGAGAGGAA+CGG - Chr1:78101562-78101581 None:intergenic 50.0%
AAGACTGCAGAGCCAAGCCA+TGG + Chr1:78103173-78103192 MsG0180004444.01.T01:intron 55.0%
ACACCTGCTGGAGAGTTTCC+TGG - Chr1:78107229-78107248 None:intergenic 55.0%
ACGCATTGGAGTGTACCGGA+CGG + Chr1:78102315-78102334 MsG0180004444.01.T01:intron 55.0%
AGGGAAGCAGGTTCAGCTGT+CGG + Chr1:78101819-78101838 MsG0180004444.01.T01:CDS 55.0%
AGTGAAATAGCCGAGGGAGG+AGG - Chr1:78102938-78102957 None:intergenic 55.0%
ATCCGAGTGTAGAGTCGACC+TGG + Chr1:78105662-78105681 MsG0180004444.01.T01:intron 55.0%
CATATCCATCCTCCACCACC+TGG - Chr1:78107030-78107049 None:intergenic 55.0%
CATGTTGGGTTTCGTGGTGG+AGG + Chr1:78102510-78102529 MsG0180004444.01.T01:intron 55.0%
CCAGACGCATTGGAGTGTAC+CGG + Chr1:78102311-78102330 MsG0180004444.01.T01:intron 55.0%
CCCCCAATCGGGACAGAAAA+CGG - Chr1:78103444-78103463 None:intergenic 55.0%
CCGACTGATGTGCCTGATAC+AGG + Chr1:78106534-78106553 MsG0180004444.01.T01:CDS 55.0%
CGGTACACTCCAATGCGTCT+GGG - Chr1:78102313-78102332 None:intergenic 55.0%
CGTTGACAACCTCCATGGCT+TGG - Chr1:78103188-78103207 None:intergenic 55.0%
CTACAGACGCTATACCCGTC+CGG - Chr1:78102333-78102352 None:intergenic 55.0%
CTGGACGGCTACGAACTTCA+AGG - Chr1:78101801-78101820 None:intergenic 55.0%
CTGTCACATTTGGGCCTGTG+AGG - Chr1:78104322-78104341 None:intergenic 55.0%
CTTGAAGTTCGTAGCCGTCC+AGG + Chr1:78101799-78101818 MsG0180004444.01.T01:CDS 55.0%
CTTTGCTAGGGTCTGACCAG+AGG - Chr1:78106575-78106594 None:intergenic 55.0%
GACGGGTATAGCGTCTGTAG+CGG + Chr1:78102333-78102352 MsG0180004444.01.T01:intron 55.0%
GGGCCTGTGAGGTAGAAAAC+CGG - Chr1:78104311-78104330 None:intergenic 55.0%
GGTACACTCCAATGCGTCTG+GGG - Chr1:78102312-78102331 None:intergenic 55.0%
GTACACTCCAATGCGTCTGG+GGG - Chr1:78102311-78102330 None:intergenic 55.0%
GTACAGGCCCTGTATGGACA+TGG + Chr1:78104349-78104368 MsG0180004444.01.T01:intron 55.0%
GTGAAATAGCCGAGGGAGGA+GGG - Chr1:78102937-78102956 None:intergenic 55.0%
GTTTGTGGGAGCTGTAGGGT+TGG + Chr1:78103652-78103671 MsG0180004444.01.T01:intron 55.0%
TACTCTTCACCAAGCCCCGT+TGG - Chr1:78105801-78105820 None:intergenic 55.0%
TCATCAATGAGGGCTGCCAC+AGG - Chr1:78106441-78106460 None:intergenic 55.0%
TCCGAGTGTAGAGTCGACCT+GGG + Chr1:78105663-78105682 MsG0180004444.01.T01:intron 55.0%
TGACGATGAAGACGAGGAGG+AGG - Chr1:78101591-78101610 None:intergenic 55.0%
TGATCAAGACCAACGGGGCT+TGG + Chr1:78105789-78105808 MsG0180004444.01.T01:intron 55.0%
TGCATTTCTCCCCGTGATGG+TGG - Chr1:78102359-78102378 None:intergenic 55.0%
TGTGGGGAGTTTGACAACGC+TGG + Chr1:78107100-78107119 MsG0180004444.01.T01:CDS 55.0%
TTGTGGGAGCTGTAGGGTTG+GGG + Chr1:78103654-78103673 MsG0180004444.01.T01:intron 55.0%
! ACCCAGGTCGACTCTACACT+CGG - Chr1:78105667-78105686 None:intergenic 55.0%
! ACGGGGATTAGTGAGGGAGA+CGG - Chr1:78102979-78102998 None:intergenic 55.0%
! CCGTTTTCTGTCCCGATTGG+GGG + Chr1:78103441-78103460 MsG0180004444.01.T01:intron 55.0%
! CTCTGCAGTCTTGAGTGCTG+AGG - Chr1:78103165-78103184 None:intergenic 55.0%
!! ACGCCGTTTTCTGTCCCGAT+TGG + Chr1:78103438-78103457 MsG0180004444.01.T01:intron 55.0%
!! CAGCCCTGCTTTAGGGTTTG+CGG - Chr1:78102549-78102568 None:intergenic 55.0%
!! CGCCGTTTTCTGTCCCGATT+GGG + Chr1:78103439-78103458 MsG0180004444.01.T01:intron 55.0%
!! CTGCAGTCTTGAGTGCTGAG+GGG - Chr1:78103163-78103182 None:intergenic 55.0%
!! GCCGTTTTCTGTCCCGATTG+GGG + Chr1:78103440-78103459 MsG0180004444.01.T01:intron 55.0%
!! GTTGGCGTTGACAACCTCCA+TGG - Chr1:78103193-78103212 None:intergenic 55.0%
!! TTTGACCAGGTGGTGGAGGA+TGG + Chr1:78107022-78107041 MsG0180004444.01.T01:intron 55.0%
ACGCGTTGGAGTGTACCGGA+TGG + Chr1:78102450-78102469 MsG0180004444.01.T01:intron 60.0%
ACTGCAGAGCCAAGCCATGG+AGG + Chr1:78103176-78103195 MsG0180004444.01.T01:intron 60.0%
AGTGAGGGAGACGGAGGTGA+AGG - Chr1:78102970-78102989 None:intergenic 60.0%
CAATGAGGGCTGCCACAGGT+AGG - Chr1:78106437-78106456 None:intergenic 60.0%
CAGGCCCTGTATGGACATGG+AGG + Chr1:78104352-78104371 MsG0180004444.01.T01:intron 60.0%
CCAGACGCGTTGGAGTGTAC+CGG + Chr1:78102446-78102465 MsG0180004444.01.T01:intron 60.0%
CCGGTACACTCCAATGCGTC+TGG - Chr1:78102314-78102333 None:intergenic 60.0%
CGCATTGGAGTGTACCGGAC+GGG + Chr1:78102316-78102335 MsG0180004444.01.T01:intron 60.0%
CGCGTTGGAGTGTACCGGAT+GGG + Chr1:78102451-78102470 MsG0180004444.01.T01:intron 60.0%
CGGCCGCAAACCCTAAAGCA+GGG + Chr1:78102543-78102562 MsG0180004444.01.T01:intron 60.0%
CGGTACACTCCAACGCGTCT+GGG - Chr1:78102448-78102467 None:intergenic 60.0%
GACAGCTGAACCTGCTTCCC+TGG - Chr1:78101820-78101839 None:intergenic 60.0%
GCACATCAGTCGGCCTCTGT+AGG - Chr1:78106527-78106546 None:intergenic 60.0%
GCAGGTTCAGCTGTCGGAGA+CGG + Chr1:78101825-78101844 MsG0180004444.01.T01:CDS 60.0%
GCTGAACCTGCTTCCCTGGA+CGG - Chr1:78101816-78101835 None:intergenic 60.0%
GGTACACTCCAACGCGTCTG+GGG - Chr1:78102447-78102466 None:intergenic 60.0%
GTACACTCCAACGCGTCTGG+GGG - Chr1:78102446-78102465 None:intergenic 60.0%
GTCTGTAGCGGCCACCATCA+CGG + Chr1:78102345-78102364 MsG0180004444.01.T01:intron 60.0%
TCAATAGCGGCTGTGAGCGG+TGG + Chr1:78102413-78102432 MsG0180004444.01.T01:intron 60.0%
TCTGTAGCGGCCACCATCAC+GGG + Chr1:78102346-78102365 MsG0180004444.01.T01:intron 60.0%
TGTGGGAGCTGTAGGGTTGG+GGG + Chr1:78103655-78103674 MsG0180004444.01.T01:intron 60.0%
! GGGATTAGTGAGGGAGACGG+AGG - Chr1:78102976-78102995 None:intergenic 60.0%
! GGGTGTCACAGCAGCAGTAG+TGG - Chr1:78102917-78102936 None:intergenic 60.0%
! GTTGGGTTTCGTGGTGGAGG+CGG + Chr1:78102513-78102532 MsG0180004444.01.T01:intron 60.0%
CACTCCAATGCGTCTGGGGG+CGG - Chr1:78102308-78102327 None:intergenic 65.0%
CCGGTACACTCCAACGCGTC+TGG - Chr1:78102449-78102468 None:intergenic 65.0%
CGGCGTCGCAGTTGCTGAGA+TGG - Chr1:78103424-78103443 None:intergenic 65.0%
CTGTAGCGGCCACCATCACG+GGG + Chr1:78102347-78102366 MsG0180004444.01.T01:intron 65.0%
GCGGCCGCAAACCCTAAAGC+AGG + Chr1:78102542-78102561 MsG0180004444.01.T01:intron 65.0%
GCTGTGACACCCTCCTCCCT+CGG + Chr1:78102925-78102944 MsG0180004444.01.T01:intron 65.0%
TAGTCCACCCCCAGACGCGT+TGG + Chr1:78102436-78102455 MsG0180004444.01.T01:intron 65.0%
TAGTCCGCCCCCAGACGCAT+TGG + Chr1:78102301-78102320 MsG0180004444.01.T01:intron 65.0%
TCGTAGCCGTCCAGGGAAGC+AGG + Chr1:78101807-78101826 MsG0180004444.01.T01:CDS 65.0%
! TTCGTGGTGGAGGCGGAGCA+AGG + Chr1:78102520-78102539 MsG0180004444.01.T01:intron 65.0%
CACTCCAACGCGTCTGGGGG+TGG - Chr1:78102443-78102462 None:intergenic 70.0%
! GTGGTGGAGGCGGAGCAAGG+CGG + Chr1:78102523-78102542 MsG0180004444.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 78101360 78107264 78101360 ID=MsG0180004444.01;Name=MsG0180004444.01
Chr1 mRNA 78101360 78107264 78101360 ID=MsG0180004444.01.T01;Parent=MsG0180004444.01;Name=MsG0180004444.01.T01;_AED=0.41;_eAED=0.42;_QI=279|1|0.75|1|0.66|0.5|4|0|322
Chr1 exon 78101360 78101636 78101360 ID=MsG0180004444.01.T01:exon:12865;Parent=MsG0180004444.01.T01
Chr1 exon 78101758 78101934 78101758 ID=MsG0180004444.01.T01:exon:12866;Parent=MsG0180004444.01.T01
Chr1 exon 78106148 78106707 78106148 ID=MsG0180004444.01.T01:exon:12867;Parent=MsG0180004444.01.T01
Chr1 exon 78107031 78107264 78107031 ID=MsG0180004444.01.T01:exon:12868;Parent=MsG0180004444.01.T01
Chr1 five_prime_UTR 78101360 78101636 78101360 ID=MsG0180004444.01.T01:five_prime_utr;Parent=MsG0180004444.01.T01
Chr1 five_prime_UTR 78101758 78101759 78101758 ID=MsG0180004444.01.T01:five_prime_utr;Parent=MsG0180004444.01.T01
Chr1 CDS 78101760 78101934 78101760 ID=MsG0180004444.01.T01:cds;Parent=MsG0180004444.01.T01
Chr1 CDS 78106148 78106707 78106148 ID=MsG0180004444.01.T01:cds;Parent=MsG0180004444.01.T01
Chr1 CDS 78107031 78107264 78107031 ID=MsG0180004444.01.T01:cds;Parent=MsG0180004444.01.T01
Gene Sequence

>MsG0180004444.01.T01

ATGGAACAAGCAGTTTTGGATGACATAATCAATCGACTCCTTGAAGTTCGTAGCCGTCCAGGGAAGCAGGTTCAGCTGTCGGAGACGGAGATCCGTCAGCTATGTTCTACTGCTAGAGAGATTTTCTTGCAGCAACCTAATTTATTGGAGCTTGAAGCACCTATTAAGATTTGTGGCGACATACATGGTCAGTATTCTGATCTTCTAAGGCTTTTTGAGTATGGTGGATTACCTCCTCAGGCCAACTACTTGTTTTTGGGTGATTATGTGGATCGAGGGAAGCAAAGTTTAGAAACAATATGCCTTCTCTTAGCATATAAAATAAAGTATCCTGAGAATTTTTTTCTTTTGCGGGGAAACCATGAATGTGCTTCTATTAACCGTATATATGGATTTTATGATGAGTGTAAAAGAAGGTTCAATGTAAGGATATGGAAGGTGTTTACTGATTGCTTCAATTGCCTACCTGTGGCAGCCCTCATTGATGAAAAGATTTTGTGCATGCATGGCGGACTTTCTCCTGACTTACATAATTTGGATCAGATTAGAAACCTACAGAGGCCGACTGATGTGCCTGATACAGGTTTGCTTTGCGATCTCCTCTGGTCAGACCCTAGCAAAGAAGTTCAAGGTTGGGGAATGAATGACAGGGGAGTGTCATATACATTTGGTGCTGATAAGGTCTCAGAGTTTCTTCAGAAGCATGATTTGGATCTTATTTGCCGTGCTCATCAGGTGGTGGAGGATGGATATGAGTTCTTTGCTAACCGGCAGCTTGTAACAATATTTTCGGCGCCTAATTACTGTGGGGAGTTTGACAACGCTGGTGCTATGATGAGTGTTGATGAGACACTAATGTGCTCTTTCCAAATATTAAAGCCAGCTGATAAAAAAACAAAGCTCAATTTTGGAAGTACGACCACTACTAAACCAGGAAACTCTCCAGCAGGTGTAAAGGTAGGAAGATAG

Protein sequence

>MsG0180004444.01.T01

MEQAVLDDIINRLLEVRSRPGKQVQLSETEIRQLCSTAREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPQANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRIWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKEVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKTKLNFGSTTTTKPGNSPAGVKVGR*