AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015426.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015426.01.T01 MTR_3g069790 69.293 368 67 6 15 347 19 375 3.09e-162 458
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015426.01.T01 AT4G15640 45.399 326 133 5 53 343 10 325 5.76e-82 253
MsG0380015426.01.T01 AT4G15640 45.092 326 134 5 53 343 71 386 2.37e-81 253
MsG0380015426.01.T01 AT3G21465 46.061 330 132 6 49 343 66 384 1.92e-80 251
MsG0380015426.01.T01 AT3G21465 45.373 335 132 7 49 343 66 389 6.03e-78 244

Find 95 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCGGGAGCCCTTGATTT+TGG 0.198324 3:-70017246 MsG0380015426.01.T01:CDS
TGCAATGGTTAATGATTTAC+TGG 0.233248 3:-70013307 MsG0380015426.01.T01:CDS
TACGGTTCAGATGTCGTTTC+CGG 0.240549 3:+70017940 None:intergenic
CGGGCGAACTCAGTAGATTT+AGG 0.245189 3:+70017960 None:intergenic
GAACTTCTTCTCTTCTGTTT+AGG 0.251952 3:+70013250 None:intergenic
ATTTGTATCGTATGTATTAT+AGG 0.255004 3:-70014690 MsG0380015426.01.T01:CDS
TGCATCTGCACACCATTTAC+TGG 0.286268 3:-70017065 MsG0380015426.01.T01:intron
TTGTGGAAGCATAATGTCTA+TGG 0.319284 3:-70017101 MsG0380015426.01.T01:CDS
TGTCTAACAATACCAGTAAA+TGG 0.338321 3:+70017053 None:intergenic
TTATAGGATACAAGGTGTTC+TGG 0.339622 3:-70014674 MsG0380015426.01.T01:CDS
ATTGACCACAACCAAGCATT+TGG 0.369301 3:+70017528 None:intergenic
ACTTGAGGCAAATATAAGTT+TGG 0.371392 3:-70013277 MsG0380015426.01.T01:CDS
AACCCCAAGTGCTAAAGATT+TGG 0.373669 3:-70013056 MsG0380015426.01.T01:three_prime_UTR
TGATTAATAAGTATGCAATA+AGG 0.380553 3:-70016283 MsG0380015426.01.T01:CDS
AAGGTTCAGATTTCACTTGC+CGG 0.400102 3:+70017770 None:intergenic
CAACAATGATACTAAACTAT+TGG 0.402664 3:-70016946 MsG0380015426.01.T01:CDS
CTAAAGATTTGGTAGCATAT+TGG 0.416400 3:-70013045 MsG0380015426.01.T01:three_prime_UTR
ACGGTTCAGATGTCGTTTCC+GGG 0.426851 3:+70017941 None:intergenic
GGCTCGCACAACATTATTAC+CGG 0.435085 3:-70017789 MsG0380015426.01.T01:CDS
AAATGGTGTGCAGATGCAAC+TGG 0.441076 3:+70017070 None:intergenic
AATGTTGAAGGGACTCCAAC+AGG 0.448749 3:-70017703 MsG0380015426.01.T01:intron
TTTGTTACAATACAGATGAA+TGG 0.449585 3:-70016310 MsG0380015426.01.T01:CDS
TATCCTCACTACTGATAGTA+AGG 0.455061 3:+70012924 None:intergenic
TATAGGATACAAGGTGTTCT+GGG 0.458387 3:-70014673 MsG0380015426.01.T01:CDS
ACTGAAGAACCGATTCTCTC+GGG 0.459527 3:-70017811 MsG0380015426.01.T01:CDS
AATCGGAAACGGCAAGCAGC+AGG 0.469337 3:-70019394 MsG0380015426.01.T01:five_prime_UTR
TTGTTACAATACAGATGAAT+GGG 0.469695 3:-70016309 MsG0380015426.01.T01:CDS
AATAAAGCATACCAAAATCA+AGG 0.473268 3:+70017235 None:intergenic
ACAAAATCGCAAATCGGAAA+CGG 0.477318 3:-70019405 MsG0380015426.01.T01:five_prime_UTR
AACTTATTCATTGAAGTTGA+AGG 0.478249 3:+70012853 None:intergenic
GCTACCAAATCTTTAGCACT+TGG 0.480843 3:+70013052 None:intergenic
TTTCATCCATGTGTCAAATG+AGG 0.485481 3:+70016229 None:intergenic
GGTTAATGATTTACTGGACA+TGG 0.487224 3:-70013301 MsG0380015426.01.T01:CDS
CTGATTTAGATCTTGAATGA+TGG 0.490250 3:+70013968 None:intergenic
CATCATTCAAGATCTAAATC+AGG 0.491708 3:-70013967 MsG0380015426.01.T01:intron
ATGTGAAAGGGACCGAGTTA+CGG 0.492589 3:+70017922 None:intergenic
TCTGGAGTTGATAATGTTGA+AGG 0.493165 3:-70017715 MsG0380015426.01.T01:CDS
CATTGTTATGATCACAGACT+TGG 0.500452 3:+70013125 None:intergenic
CTACCAAATCTTTAGCACTT+GGG 0.500618 3:+70013053 None:intergenic
CACTGAAGAACCGATTCTCT+CGG 0.501870 3:-70017812 MsG0380015426.01.T01:CDS
GAGTGAAAGGAAAGGAAAGT+CGG 0.506842 3:+70017845 None:intergenic
GAAATCTGATATTCTTGCAA+TGG 0.507176 3:-70013322 MsG0380015426.01.T01:CDS
CCTCTGTCGTGAAGTTACTA+AGG 0.511005 3:-70017277 MsG0380015426.01.T01:CDS
AAAACTATATCTGCCGTGCC+TGG 0.513854 3:+70016879 None:intergenic
CAATGATACTAAACTATTGG+TGG 0.518517 3:-70016943 MsG0380015426.01.T01:CDS
TCACTTCAACATGAACCAAA+AGG 0.518861 3:+70012886 None:intergenic
GCAATAAGGTTTGTCAAGGC+TGG 0.519119 3:-70016269 MsG0380015426.01.T01:CDS
TACCAAATCTTTAGCACTTG+GGG 0.521279 3:+70013054 None:intergenic
GACCACAACCAAGCATTTGG+AGG 0.521507 3:+70017531 None:intergenic
CGTATGTATTATAGGATACA+AGG 0.521762 3:-70014682 MsG0380015426.01.T01:CDS
TGTGCGAGCCCCGAGAGAAT+CGG 0.524100 3:+70017802 None:intergenic
ACTTATTCATTGAAGTTGAA+GGG 0.532460 3:+70012854 None:intergenic
GAGCAGGAAAGAAGGCTTTG+TGG 0.537927 3:-70017118 MsG0380015426.01.T01:intron
TTGTAGGGTCTTCTGTTGGA+AGG 0.538303 3:-70014011 MsG0380015426.01.T01:intron
TCGACGCGGAAGAAAATTGA+AGG 0.538864 3:+70017751 None:intergenic
ATACGATACAAATCGCGATA+CGG 0.543317 3:+70014700 None:intergenic
CAACCAAGCATTTGGAGGCA+TGG 0.544992 3:+70017536 None:intergenic
AAATGTGTGAGCAGGAAAGA+AGG 0.546383 3:-70017126 MsG0380015426.01.T01:intron
AAGATTTGGTAGCATATTGG+TGG 0.547949 3:-70013042 MsG0380015426.01.T01:three_prime_UTR
TGCCTCCAAATGCTTGGTTG+TGG 0.548417 3:-70017533 MsG0380015426.01.T01:CDS
CTAAATCTACTGAGTTCGCC+CGG 0.549099 3:-70017959 MsG0380015426.01.T01:five_prime_UTR
ATGAAATTTGCTGCTAAAAG+AGG 0.555816 3:-70016212 MsG0380015426.01.T01:intron
ATTCTGAGCAAATGCTATTG+TGG 0.556903 3:+70013228 None:intergenic
GATCCATGCCTCCAAATGCT+TGG 0.559232 3:-70017539 MsG0380015426.01.T01:CDS
CTTGCATGTCTAAATGTGAA+AGG 0.560031 3:+70017909 None:intergenic
TTGCATGTCTAAATGTGAAA+GGG 0.560882 3:+70017910 None:intergenic
TTAATCTATTTGATGAGCAG+AGG 0.561934 3:-70017338 MsG0380015426.01.T01:CDS
GAAAATCGCAAATCGCAAGC+AGG 0.564880 3:-70019340 MsG0380015426.01.T01:five_prime_UTR
TACTAAGGCATGTGTTCATG+CGG 0.574423 3:-70017262 MsG0380015426.01.T01:CDS
ATTGCAAGAGCCGAGAGACT+CGG 0.576053 3:+70017870 None:intergenic
AGTAAGATACGTAACAGTGA+AGG 0.584397 3:-70014734 MsG0380015426.01.T01:CDS
GTTAATGATTTACTGGACAT+GGG 0.584628 3:-70013300 MsG0380015426.01.T01:CDS
TTTACTGGACATGGGACTTG+AGG 0.587493 3:-70013292 MsG0380015426.01.T01:CDS
CAAATGCTCGCCGAGTCTCT+CGG 0.588337 3:-70017880 MsG0380015426.01.T01:CDS
GTGCTTCGAAGATGAGTGAA+AGG 0.588717 3:+70017832 None:intergenic
TTTACCATTGCAACCAGGCA+CGG 0.589615 3:-70016892 MsG0380015426.01.T01:CDS
ATGATGGCAACAGCGTCACT+AGG 0.594489 3:+70013984 None:intergenic
ACGACATCTGAACCGTAACT+CGG 0.595691 3:-70017934 MsG0380015426.01.T01:five_prime_UTR
CTGGAGTTGATAATGTTGAA+GGG 0.596088 3:-70017714 MsG0380015426.01.T01:CDS
ACTAAGGCATGTGTTCATGC+GGG 0.600193 3:-70017261 MsG0380015426.01.T01:CDS
TGATACTAAACTATTGGTGG+AGG 0.600901 3:-70016940 MsG0380015426.01.T01:CDS
GTAAGATACGTAACAGTGAA+GGG 0.602233 3:-70014733 MsG0380015426.01.T01:CDS
ATAAAGCATACCAAAATCAA+GGG 0.602288 3:+70017236 None:intergenic
GAAGCATAATGTCTATGGAT+TGG 0.602691 3:-70017096 MsG0380015426.01.T01:CDS
TTCACATTTAGACATGCAAG+TGG 0.612949 3:-70017906 MsG0380015426.01.T01:five_prime_UTR
GTATGCAATAAGGTTTGTCA+AGG 0.622229 3:-70016273 MsG0380015426.01.T01:CDS
GTGAAACCTCATTTGACACA+TGG 0.623217 3:-70016235 MsG0380015426.01.T01:CDS
TCGAAGATGAGTGAAAGGAA+AGG 0.627227 3:+70017837 None:intergenic
TCTGCCGTGCCTGGTTGCAA+TGG 0.629222 3:+70016888 None:intergenic
CTGAAGAACCGATTCTCTCG+GGG 0.631566 3:-70017810 MsG0380015426.01.T01:CDS
ATTCCTTACTATCAGTAGTG+AGG 0.645923 3:-70012927 MsG0380015426.01.T01:three_prime_UTR
AATGATTTACCATTGCAACC+AGG 0.653462 3:-70016897 MsG0380015426.01.T01:CDS
TAGTAACTTCACGACAGAGG+TGG 0.668692 3:+70017280 None:intergenic
AATGGTGTGCAGATGCAACT+GGG 0.682807 3:+70017071 None:intergenic
CCTTAGTAACTTCACGACAG+AGG 0.686364 3:+70017277 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAATAATGATAAC+TGG + Chr3:70014861-70014880 None:intergenic 10.0%
!! TAATTCATTTAAAAAAGATA+AGG + Chr3:70016520-70016539 None:intergenic 10.0%
!! TTTCAAAAAATATTAAATGT+TGG - Chr3:70017296-70017315 MsG0380015426.01.T01:CDS 10.0%
!!! TTAAAATTTGGATATTTTAA+TGG + Chr3:70013967-70013986 None:intergenic 10.0%
!! AACATTAAAATTTGGTATAA+TGG - Chr3:70017233-70017252 MsG0380015426.01.T01:CDS 15.0%
!! GTTCAATAAATATTAAATGT+TGG + Chr3:70013905-70013924 None:intergenic 15.0%
!! TTGTAACATTATAAATAACA+TGG + Chr3:70017064-70017083 None:intergenic 15.0%
!! TTTGTAACATATAAATAACA+TGG - Chr3:70014121-70014140 MsG0380015426.01.T01:intron 15.0%
!! AAAAAATAATGATAACTGGA+AGG + Chr3:70014857-70014876 None:intergenic 20.0%
!! AATTAAATTACTAACTCAAG+TGG - Chr3:70013648-70013667 MsG0380015426.01.T01:intron 20.0%
!! ACAAAAATGAAATTCGAAAA+GGG + Chr3:70014602-70014621 None:intergenic 20.0%
!! AGTAATCATAGACAATAAAA+AGG - Chr3:70017167-70017186 MsG0380015426.01.T01:intron 20.0%
!! AGTATCATAGACAATAAAAA+GGG + Chr3:70014036-70014055 None:intergenic 20.0%
!! ATAACTTCTTCAAAATTTGA+TGG - Chr3:70016554-70016573 MsG0380015426.01.T01:intron 20.0%
!! ATTTGAGAACAAAAATAATC+TGG - Chr3:70019272-70019291 MsG0380015426.01.T01:intron 20.0%
!! ATTTGTATCGTATGTATTAT+AGG - Chr3:70017561-70017580 MsG0380015426.01.T01:CDS 20.0%
!! GTAATCATAGACAATAAAAA+GGG - Chr3:70017168-70017187 MsG0380015426.01.T01:intron 20.0%
!! TAATAAGAAAAACTGACATA+TGG + Chr3:70017948-70017967 None:intergenic 20.0%
!! TGATTAATAAGTATGCAATA+AGG - Chr3:70015968-70015987 MsG0380015426.01.T01:intron 20.0%
!! TTCAGTCAAACATTAAAATT+TGG - Chr3:70017225-70017244 MsG0380015426.01.T01:intron 20.0%
!! TTCAGTCAAACATTAAAATT+TGG + Chr3:70017244-70017225 None:intergenic 20.0%
!! TTCATAAATAGCAATAAAGT+TGG - Chr3:70016357-70016376 MsG0380015426.01.T01:intron 20.0%
!!! AACAATGTAGTTTTACTAAA+TGG - Chr3:70019142-70019161 MsG0380015426.01.T01:intron 20.0%
!!! AATTTGGATATTTTAATGGA+TGG + Chr3:70013963-70013982 None:intergenic 20.0%
!!! ATTCGTTTTTTAAACAATCA+AGG - Chr3:70018036-70018055 MsG0380015426.01.T01:intron 20.0%
!!! CTTTGTTTTTTTTAACCTTT+TGG - Chr3:70019350-70019369 MsG0380015426.01.T01:five_prime_UTR 20.0%
!!! TTAAAATTTGGTATAATGGA+TGG - Chr3:70017237-70017256 MsG0380015426.01.T01:CDS 20.0%
!!! TTCTTGTTTTTTTATTTCCT+TGG - Chr3:70013150-70013169 MsG0380015426.01.T01:three_prime_UTR 20.0%
!!! TTTTCTATTTTCTAATGACT+CGG + Chr3:70017772-70017791 None:intergenic 20.0%
! AAATTGAAATGAAAACCACA+TGG - Chr3:70016315-70016334 MsG0380015426.01.T01:CDS 25.0%
! AACTTATTCATTGAAGTTGA+AGG + Chr3:70019401-70019420 None:intergenic 25.0%
! AATAAAGCATACCAAAATCA+AGG + Chr3:70015019-70015038 None:intergenic 25.0%
! AATTGAAATGAAAACCACAT+GGG - Chr3:70016316-70016335 MsG0380015426.01.T01:intron 25.0%
! ACAAGCAAATTCAAAAACTT+GGG + Chr3:70019059-70019078 None:intergenic 25.0%
! ACCCTTTAGATGAATAAAAA+AGG + Chr3:70015795-70015814 None:intergenic 25.0%
! ACTTATTCATTGAAGTTGAA+GGG + Chr3:70019400-70019419 None:intergenic 25.0%
! AGATACATGATTCAAAAAAG+TGG + Chr3:70016670-70016689 None:intergenic 25.0%
! ATAAAACAAAAGGAGTTTCA+GGG + Chr3:70015593-70015612 None:intergenic 25.0%
! ATAAAGCATACCAAAATCAA+GGG + Chr3:70015018-70015037 None:intergenic 25.0%
! ATAACTGGAAGGAAAAAAAA+AGG + Chr3:70014846-70014865 None:intergenic 25.0%
! ATAAGAACAGTTGTGAAAAT+AGG - Chr3:70018465-70018484 MsG0380015426.01.T01:intron 25.0%
! CAACAATGATACTAAACTAT+TGG - Chr3:70015305-70015324 MsG0380015426.01.T01:intron 25.0%
! CAACATAAAAAGAAAAAGTG+AGG + Chr3:70015863-70015882 None:intergenic 25.0%
! CCCTTTAGATGAATAAAAAA+GGG + Chr3:70015794-70015813 None:intergenic 25.0%
! CTAAAAACTGAGAAAAAAAC+AGG + Chr3:70016277-70016296 None:intergenic 25.0%
! GAAGATATGAAATGAAATTG+AGG - Chr3:70015091-70015110 MsG0380015426.01.T01:intron 25.0%
! GACAAAAATGAAATTCGAAA+AGG + Chr3:70014603-70014622 None:intergenic 25.0%
! GAGTATCATAGACAATAAAA+AGG + Chr3:70014037-70014056 None:intergenic 25.0%
! GTATAGCTTATGTTCAATAT+AGG + Chr3:70016163-70016182 None:intergenic 25.0%
! GTTATAAAGAAATAGATCGA+GGG + Chr3:70014096-70014115 None:intergenic 25.0%
! TAAGAACAGTTGTGAAAATA+GGG - Chr3:70018466-70018485 MsG0380015426.01.T01:intron 25.0%
! TACAAGCAAATTCAAAAACT+TGG + Chr3:70019060-70019079 None:intergenic 25.0%
! TAGAAAAGATGATAGAAACT+CGG - Chr3:70013227-70013246 MsG0380015426.01.T01:exon 25.0%
! TGTTATAAAGAAATAGATCG+AGG + Chr3:70014097-70014116 None:intergenic 25.0%
! TTAATGTTTGACTGAAAAGT+AGG - Chr3:70013983-70014002 MsG0380015426.01.T01:CDS 25.0%
! TTAATGTTTGACTGAAAAGT+AGG + Chr3:70014002-70013983 None:intergenic 25.0%
! TTAATTGTCAAACCAAACAA+TGG + Chr3:70017871-70017890 None:intergenic 25.0%
! TTGTTACAATACAGATGAAT+GGG - Chr3:70015942-70015961 MsG0380015426.01.T01:intron 25.0%
! TTTGTTACAATACAGATGAA+TGG - Chr3:70015941-70015960 MsG0380015426.01.T01:intron 25.0%
!! AATTACTTGTACTGATAGTA+AGG + Chr3:70019307-70019326 None:intergenic 25.0%
!! ATCCTGCTATAAATGATTTT+TGG - Chr3:70017674-70017693 MsG0380015426.01.T01:intron 25.0%
!! ATTCATCTAAAGGGTTATTT+TGG - Chr3:70015800-70015819 MsG0380015426.01.T01:intron 25.0%
!! CAGCTTTATAAAAGACAAAA+CGG + Chr3:70015049-70015068 None:intergenic 25.0%
!! GTGGTTTTCATTTCAATTTT+AGG + Chr3:70016314-70016333 None:intergenic 25.0%
!! TACTTCTTTGTTTCAATCAT+CGG + Chr3:70018360-70018379 None:intergenic 25.0%
!! TCCTGCTATAAATGATTTTT+GGG - Chr3:70017675-70017694 MsG0380015426.01.T01:intron 25.0%
!! TGGGAATGAATTTTTATCAT+TGG + Chr3:70014162-70014181 None:intergenic 25.0%
!!! AAACTCCTTTTGTTTTATGA+AGG - Chr3:70015595-70015614 MsG0380015426.01.T01:intron 25.0%
!!! ACCCTTTTTTATTCATCTAA+AGG - Chr3:70015790-70015809 MsG0380015426.01.T01:intron 25.0%
!!! ATTCTGATCTGATTTTTTCT+TGG - Chr3:70013368-70013387 MsG0380015426.01.T01:intron 25.0%
!!! ATTCTTGTGCTTTTTTTTCA+CGG - Chr3:70013003-70013022 MsG0380015426.01.T01:three_prime_UTR 25.0%
!!! CCCTTTTTTATTCATCTAAA+GGG - Chr3:70015791-70015810 MsG0380015426.01.T01:intron 25.0%
!!! CCTGTTTTTATGATTTTGTA+GGG - Chr3:70018225-70018244 MsG0380015426.01.T01:intron 25.0%
!!! CTGTTTTTTTCTCAGTTTTT+AGG - Chr3:70016275-70016294 MsG0380015426.01.T01:CDS 25.0%
!!! GAAATGAAATTGAGGTTTTT+TGG - Chr3:70015099-70015118 MsG0380015426.01.T01:intron 25.0%
!!! GGGAATGAATTTTTTATCAT+TGG - Chr3:70017023-70017042 MsG0380015426.01.T01:intron 25.0%
!!! TTCTGATCTGATTTTTTCTT+GGG - Chr3:70013369-70013388 MsG0380015426.01.T01:intron 25.0%
AAATTAGTTCCACAACATGA+TGG - Chr3:70018526-70018545 MsG0380015426.01.T01:intron 30.0%
AAGAACAGTTGTGAAAATAG+GGG - Chr3:70018467-70018486 MsG0380015426.01.T01:intron 30.0%
AAGATGCAAGTTAGTACATA+AGG + Chr3:70016239-70016258 None:intergenic 30.0%
AAGGAAAAAAAAAGGTGAGA+GGG + Chr3:70014838-70014857 None:intergenic 30.0%
AATAAGCTGTTTATCCAAAC+AGG - Chr3:70014267-70014286 MsG0380015426.01.T01:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG + Chr3:70014286-70014267 None:intergenic 30.0%
ACAAAATGAAGAGGAAAGAA+AGG - Chr3:70018795-70018814 MsG0380015426.01.T01:intron 30.0%
ACTTGAGGCAAATATAAGTT+TGG - Chr3:70018974-70018993 MsG0380015426.01.T01:intron 30.0%
AGATAGTAAGTCGAAATTGA+TGG - Chr3:70013524-70013543 MsG0380015426.01.T01:intron 30.0%
AGTTGCCTTCATAAAACAAA+AGG + Chr3:70015603-70015622 None:intergenic 30.0%
ATGTGATGCAACTTAATACA+GGG + Chr3:70018123-70018142 None:intergenic 30.0%
CAAAAGAAGCTCATGAAATT+AGG + Chr3:70016110-70016129 None:intergenic 30.0%
CAAGATCATGCTATAAATCA+TGG - Chr3:70016609-70016628 MsG0380015426.01.T01:intron 30.0%
CAATAGTGTCACAGAAAAAT+TGG + Chr3:70013474-70013493 None:intergenic 30.0%
CAATGATACTAAACTATTGG+TGG - Chr3:70015308-70015327 MsG0380015426.01.T01:intron 30.0%
CATAAAACAAAAGGAGTTTC+AGG + Chr3:70015594-70015613 None:intergenic 30.0%
CATCATTCAAGATCTAAATC+AGG - Chr3:70018284-70018303 MsG0380015426.01.T01:intron 30.0%
CCCTACAAAATCATAAAAAC+AGG + Chr3:70018228-70018247 None:intergenic 30.0%
CCTACAAATAAAAAACACGA+AGG + Chr3:70017744-70017763 None:intergenic 30.0%
CGTATGTATTATAGGATACA+AGG - Chr3:70017569-70017588 MsG0380015426.01.T01:CDS 30.0%
CTGATTTAGATCTTGAATGA+TGG + Chr3:70018286-70018305 None:intergenic 30.0%
GAAATCTGATATTCTTGCAA+TGG - Chr3:70018929-70018948 MsG0380015426.01.T01:intron 30.0%
GAGACAGAATCAAAGAAATT+AGG + Chr3:70015233-70015252 None:intergenic 30.0%
GATAGTAAGTCGAAATTGAT+GGG - Chr3:70013525-70013544 MsG0380015426.01.T01:intron 30.0%
GATAGTACTACATGTATTCA+TGG + Chr3:70016580-70016599 None:intergenic 30.0%
GTACTTTAACCAATCTTTAC+AGG + Chr3:70018433-70018452 None:intergenic 30.0%
GTTAATGATTTACTGGACAT+GGG - Chr3:70018951-70018970 MsG0380015426.01.T01:intron 30.0%
GTTATAAAGACATAGATCGA+GGG - Chr3:70017110-70017129 MsG0380015426.01.T01:CDS 30.0%
TAAAACAAAAGGAGTTTCAG+GGG + Chr3:70015592-70015611 None:intergenic 30.0%
TAAAGTTGGAATCCTGAATT+TGG - Chr3:70016371-70016390 MsG0380015426.01.T01:intron 30.0%
TACATAACTCCATGATAACT+AGG - Chr3:70016858-70016877 MsG0380015426.01.T01:intron 30.0%
TATGTGATGCAACTTAATAC+AGG + Chr3:70018124-70018143 None:intergenic 30.0%
TCGATAATAGAACCAAATTC+AGG + Chr3:70016386-70016405 None:intergenic 30.0%
TGCAATGGTTAATGATTTAC+TGG - Chr3:70018944-70018963 MsG0380015426.01.T01:intron 30.0%
TGTCTAACAATACCAGTAAA+TGG + Chr3:70015201-70015220 None:intergenic 30.0%
TGTTAAGTTAAGAGTTGCAT+TGG - Chr3:70013499-70013518 MsG0380015426.01.T01:intron 30.0%
TGTTATAAAGACATAGATCG+AGG - Chr3:70017109-70017128 MsG0380015426.01.T01:CDS 30.0%
TTAACAGTTGTTTGTCTAAG+TGG - Chr3:70016134-70016153 MsG0380015426.01.T01:intron 30.0%
TTAATCTATTTGATGAGCAG+AGG - Chr3:70014913-70014932 MsG0380015426.01.T01:intron 30.0%
TTATTAGAGAACATACTCTC+TGG - Chr3:70017962-70017981 MsG0380015426.01.T01:five_prime_UTR 30.0%
TTCAAGATCTAAATCAGGTA+TGG - Chr3:70018289-70018308 MsG0380015426.01.T01:intron 30.0%
TTCTTAAGCACAAAATGAAG+AGG - Chr3:70018786-70018805 MsG0380015426.01.T01:intron 30.0%
TTGCATGTCTAAATGTGAAA+GGG + Chr3:70014344-70014363 None:intergenic 30.0%
TTGTCTGATACCAAAAAATC+TGG - Chr3:70018716-70018735 MsG0380015426.01.T01:intron 30.0%
! AGGGTAAGGTTTCTAAAAAT+TGG + Chr3:70018104-70018123 None:intergenic 30.0%
! CTAAAGATTTGGTAGCATAT+TGG - Chr3:70019206-70019225 MsG0380015426.01.T01:intron 30.0%
! GGGTAAGGTTTCTAAAAATT+GGG + Chr3:70018103-70018122 None:intergenic 30.0%
! TTTCCTGTGATTTTTGTTCT+CGG - Chr3:70013058-70013077 MsG0380015426.01.T01:three_prime_UTR 30.0%
!! ATGAAATTTGCTGCTAAAAG+AGG - Chr3:70016039-70016058 MsG0380015426.01.T01:intron 30.0%
!! ATTTGGTTCTATTATCGATC+TGG - Chr3:70016388-70016407 MsG0380015426.01.T01:intron 30.0%
!! ATTTTCATAGTTTTGCTACC+TGG - Chr3:70013688-70013707 MsG0380015426.01.T01:intron 30.0%
!!! AATAAATGCCTACTTTTTGC+TGG - Chr3:70016199-70016218 MsG0380015426.01.T01:intron 30.0%
!!! ATCTTTCATGCCAGATTTTT+TGG + Chr3:70018729-70018748 None:intergenic 30.0%
!!! CCTTCGTGTTTTTTATTTGT+AGG - Chr3:70017741-70017760 MsG0380015426.01.T01:CDS 30.0%
!!! GCCTGTTTTTATGATTTTGT+AGG - Chr3:70018224-70018243 MsG0380015426.01.T01:intron 30.0%
!!! TTTGTTTTATGAAGGCAACT+TGG - Chr3:70015603-70015622 MsG0380015426.01.T01:intron 30.0%
!!! TTTTTTTCTGCTTTACTGAC+AGG - Chr3:70018890-70018909 MsG0380015426.01.T01:intron 30.0%
AACACGTTACTGTCTTATAG+AGG + Chr3:70018872-70018891 None:intergenic 35.0%
AAGCACAAGAATACAAGAAC+AGG + Chr3:70012995-70013014 None:intergenic 35.0%
AAGTCGAAACACATCAGAAT+TGG + Chr3:70018152-70018171 None:intergenic 35.0%
AATACAAGAACAGGAGAAGA+AGG + Chr3:70012986-70013005 None:intergenic 35.0%
AATGATTTACCATTGCAACC+AGG - Chr3:70015354-70015373 MsG0380015426.01.T01:intron 35.0%
ACAAAATCGCAAATCGGAAA+CGG - Chr3:70012846-70012865 MsG0380015426.01.T01:three_prime_UTR 35.0%
ACAGAAGACTAATATCGTGA+TGG + Chr3:70014767-70014786 None:intergenic 35.0%
ACTTATTATCAGTGCAGTGT+AGG - Chr3:70013745-70013764 MsG0380015426.01.T01:intron 35.0%
ACTTATTATCAGTGCAGTGT+AGG + Chr3:70013764-70013745 None:intergenic 35.0%
ACTTCTTCACTACTAATCAC+AGG + Chr3:70013114-70013133 None:intergenic 35.0%
AGAAACTAACAAATCTGCGA+AGG + Chr3:70014806-70014825 None:intergenic 35.0%
AGCAAGAAAATGCTTGCATT+TGG - Chr3:70017002-70017021 MsG0380015426.01.T01:intron 35.0%
AGCAAGAAAATGCTTGCATT+TGG + Chr3:70017021-70017002 None:intergenic 35.0%
AGGAAAAAAAAAGGTGAGAG+GGG + Chr3:70014837-70014856 None:intergenic 35.0%
AGTAAGATACACATCAGTGT+AGG - Chr3:70017607-70017626 MsG0380015426.01.T01:intron 35.0%
AGTAAGATACGTAACAGTGA+AGG - Chr3:70017517-70017536 MsG0380015426.01.T01:CDS 35.0%
AGTCGAAACACATCAGAATT+GGG + Chr3:70018151-70018170 None:intergenic 35.0%
ATAAATCATGGTTGTCAGAC+CGG - Chr3:70016621-70016640 MsG0380015426.01.T01:intron 35.0%
ATAACTCCATGATAACTAGG+AGG - Chr3:70016861-70016880 MsG0380015426.01.T01:intron 35.0%
ATACGATACAAATCGCGATA+CGG + Chr3:70017554-70017573 None:intergenic 35.0%
ATAGCTTACCAAATGCAAAC+AGG + Chr3:70015255-70015274 None:intergenic 35.0%
ATGATAGAAACTCGGTTAGA+TGG - Chr3:70013235-70013254 MsG0380015426.01.T01:exon 35.0%
ATGCAACTTAATACAGGGTA+AGG + Chr3:70018118-70018137 None:intergenic 35.0%
ATTCCTTACTATCAGTAGTG+AGG - Chr3:70019324-70019343 MsG0380015426.01.T01:intron 35.0%
ATTCTGAGCAAATGCTATTG+TGG + Chr3:70019026-70019045 None:intergenic 35.0%
ATTTCTTGACCATCATGTTG+TGG + Chr3:70018538-70018557 None:intergenic 35.0%
CAATTGAATGAAGAACCTGT+TGG + Chr3:70014566-70014585 None:intergenic 35.0%
CACAAAGACACAAACTCATA+AGG + Chr3:70017329-70017348 None:intergenic 35.0%
CATTGTTATGATCACAGACT+TGG + Chr3:70019129-70019148 None:intergenic 35.0%
CTAAAACCTCCTAGTTATCA+TGG + Chr3:70016870-70016889 None:intergenic 35.0%
CTACCAAATCTTTAGCACTT+GGG + Chr3:70019201-70019220 None:intergenic 35.0%
CTTATGAGTTTGTGTCTTTG+TGG - Chr3:70017327-70017346 MsG0380015426.01.T01:CDS 35.0%
CTTCTGGTGTTTCAAATTGA+TGG - Chr3:70014200-70014219 MsG0380015426.01.T01:intron 35.0%
CTTGCATGTCTAAATGTGAA+AGG + Chr3:70014345-70014364 None:intergenic 35.0%
GAACTTCTTCTCTTCTGTTT+AGG + Chr3:70019004-70019023 None:intergenic 35.0%
GAAGCATAATGTCTATGGAT+TGG - Chr3:70015155-70015174 MsG0380015426.01.T01:intron 35.0%
GAAGGAAAAAAAAAGGTGAG+AGG + Chr3:70014839-70014858 None:intergenic 35.0%
GACGTGTAGATTCTATAGTA+AGG - Chr3:70013277-70013296 MsG0380015426.01.T01:CDS 35.0%
GCAAGAAAATGCTTGCATTT+GGG - Chr3:70017003-70017022 MsG0380015426.01.T01:intron 35.0%
GCAAGAAAATGCTTGCATTT+GGG + Chr3:70017022-70017003 None:intergenic 35.0%
GCCCAAAAATCATTTATAGC+AGG + Chr3:70017679-70017698 None:intergenic 35.0%
GGTTAATGATTTACTGGACA+TGG - Chr3:70018950-70018969 MsG0380015426.01.T01:intron 35.0%
GGTTATCATCCTGTAAAGAT+TGG - Chr3:70018421-70018440 MsG0380015426.01.T01:intron 35.0%
GTAAGATACACATCAGTGTA+GGG - Chr3:70017608-70017627 MsG0380015426.01.T01:intron 35.0%
GTAAGATACGTAACAGTGAA+GGG - Chr3:70017518-70017537 MsG0380015426.01.T01:CDS 35.0%
GTATGCAATAAGGTTTGTCA+AGG - Chr3:70015978-70015997 MsG0380015426.01.T01:intron 35.0%
TACCAAATCTTTAGCACTTG+GGG + Chr3:70019200-70019219 None:intergenic 35.0%
TATCCTCACTACTGATAGTA+AGG + Chr3:70019330-70019349 None:intergenic 35.0%
TCAAAAAGCCAGCAAAAAGT+AGG + Chr3:70016210-70016229 None:intergenic 35.0%
TCACTTCAACATGAACCAAA+AGG + Chr3:70019368-70019387 None:intergenic 35.0%
TGATACTAAACTATTGGTGG+AGG - Chr3:70015311-70015330 MsG0380015426.01.T01:intron 35.0%
TGCATTGGACTATTGTCAAA+AGG + Chr3:70013184-70013203 None:intergenic 35.0%
TTACGTAAGTATCACCAACA+GGG - Chr3:70017478-70017497 MsG0380015426.01.T01:intron 35.0%
TTCACATTTAGACATGCAAG+TGG - Chr3:70014345-70014364 MsG0380015426.01.T01:intron 35.0%
TTCAGAAACTTGTATCAGAG+TGG - Chr3:70018753-70018772 MsG0380015426.01.T01:intron 35.0%
TTGTGCTTAAGAACTTCAAC+AGG + Chr3:70018779-70018798 None:intergenic 35.0%
TTTCATCCATGTGTCAAATG+AGG + Chr3:70016025-70016044 None:intergenic 35.0%
! AAGATTTGGTAGCATATTGG+TGG - Chr3:70019209-70019228 MsG0380015426.01.T01:intron 35.0%
! CTTCTGGTCTTTCAAATTGA+TGG + Chr3:70016984-70017003 None:intergenic 35.0%
! TATAGGATACAAGGTGTTCT+GGG - Chr3:70017578-70017597 MsG0380015426.01.T01:CDS 35.0%
! TGTTGAGCAATTGCTTTAAG+AGG + Chr3:70015495-70015514 None:intergenic 35.0%
! TGTTTCTATCTCTTGCTTCT+TGG - Chr3:70013343-70013362 MsG0380015426.01.T01:intron 35.0%
! TTATAGGATACAAGGTGTTC+TGG - Chr3:70017577-70017596 MsG0380015426.01.T01:CDS 35.0%
! TTGTGGAAGCATAATGTCTA+TGG - Chr3:70015150-70015169 MsG0380015426.01.T01:intron 35.0%
!! CTGGAGTTGATAATGTTGAA+GGG - Chr3:70014537-70014556 MsG0380015426.01.T01:intron 35.0%
!! TATTTTAAACCTTGCCCATG+TGG + Chr3:70016333-70016352 None:intergenic 35.0%
!! TCTGGAGTTGATAATGTTGA+AGG - Chr3:70014536-70014555 MsG0380015426.01.T01:intron 35.0%
!!! GTGCTTTTTTTTCACGGTAA+CGG - Chr3:70013009-70013028 MsG0380015426.01.T01:three_prime_UTR 35.0%
!!! TCACTTTTAGCTTCGAAAAG+TGG + Chr3:70015740-70015759 None:intergenic 35.0%
AAAAACAGGATGCCAACATC+AGG + Chr3:70016263-70016282 None:intergenic 40.0%
AAACCAAACAATGGTGTGGA+TGG + Chr3:70017862-70017881 None:intergenic 40.0%
AAATGAAAACCACATGGGCA+AGG - Chr3:70016321-70016340 MsG0380015426.01.T01:intron 40.0%
AAATGATTGACCCAGGTAAC+AGG + Chr3:70015915-70015934 None:intergenic 40.0%
AAATGTGTGAGCAGGAAAGA+AGG - Chr3:70015125-70015144 MsG0380015426.01.T01:intron 40.0%
AACCCCAAGTGCTAAAGATT+TGG - Chr3:70019195-70019214 MsG0380015426.01.T01:intron 40.0%
AACTGTAAAAAGCTTCGACG+CGG + Chr3:70014517-70014536 None:intergenic 40.0%
AAGCTATTCCACTGGACAAT+AGG + Chr3:70013569-70013588 None:intergenic 40.0%
AAGGTTCAGATTTCACTTGC+CGG + Chr3:70014484-70014503 None:intergenic 40.0%
AATCCATCCACACCATTGTT+TGG - Chr3:70017856-70017875 MsG0380015426.01.T01:CDS 40.0%
AATGGATGGAGTGCAATAGT+TGG - Chr3:70017251-70017270 MsG0380015426.01.T01:CDS 40.0%
AATGGATGGAGTGCAATAGT+TGG + Chr3:70017270-70017251 None:intergenic 40.0%
ACACACAAAGCACATAAGCT+TGG + Chr3:70017914-70017933 None:intergenic 40.0%
ACGATACACGATACATATCC+CGG + Chr3:70016643-70016662 None:intergenic 40.0%
ACTTGCATCTTTCCTGATGT+TGG - Chr3:70016248-70016267 MsG0380015426.01.T01:CDS 40.0%
ACTTGTAACCATACACACAC+AGG + Chr3:70015631-70015650 None:intergenic 40.0%
AGCTTCGAAAAGTGGTTCTT+TGG + Chr3:70015732-70015751 None:intergenic 40.0%
ATTGACCACAACCAAGCATT+TGG + Chr3:70014726-70014745 None:intergenic 40.0%
CAAGTCAAGACACATTAGTC+AGG + Chr3:70016491-70016510 None:intergenic 40.0%
CTACAACAGAATTCAGCAAC+TGG + Chr3:70018176-70018195 None:intergenic 40.0%
CTGTTTATCCAAACAGGTCA+GGG + Chr3:70016894-70016913 None:intergenic 40.0%
GAGTGAAAGGAAAGGAAAGT+CGG + Chr3:70014409-70014428 None:intergenic 40.0%
GCTACCAAATCTTTAGCACT+TGG + Chr3:70019202-70019221 None:intergenic 40.0%
GGAAAATCGCCGTTACAAAA+CGG + Chr3:70013093-70013112 None:intergenic 40.0%
GTGAAACCTCATTTGACACA+TGG - Chr3:70016016-70016035 MsG0380015426.01.T01:intron 40.0%
GTTACGTAAGTATCACCAAC+AGG - Chr3:70017477-70017496 MsG0380015426.01.T01:intron 40.0%
TAAATCATGGTTGTCAGACC+GGG - Chr3:70016622-70016641 MsG0380015426.01.T01:intron 40.0%
TACTAAGGCATGTGTTCATG+CGG - Chr3:70014989-70015008 MsG0380015426.01.T01:intron 40.0%
TCGAAGATGAGTGAAAGGAA+AGG + Chr3:70014417-70014436 None:intergenic 40.0%
TGTCAAACCAAACAATGGTG+TGG + Chr3:70017866-70017885 None:intergenic 40.0%
TTCTGTCTCCTGTTTGCATT+TGG - Chr3:70015244-70015263 MsG0380015426.01.T01:intron 40.0%
! AACTGGATTTTCTTGTGCCA+AGG - Chr3:70017828-70017847 MsG0380015426.01.T01:CDS 40.0%
! CAGGATTTGAAATGAGTGCA+TGG + Chr3:70015556-70015575 None:intergenic 40.0%
! CAGTAGATTTAGGACCTGTT+TGG + Chr3:70014284-70014303 None:intergenic 40.0%
! CTGCTGATACCGTTTTGTAA+CGG - Chr3:70013081-70013100 MsG0380015426.01.T01:three_prime_UTR 40.0%
! GATTTTGTAGGGTCTTCTGT+TGG - Chr3:70018236-70018255 MsG0380015426.01.T01:intron 40.0%
! GTCGAAGCTTTTTACAGTTC+TGG - Chr3:70014518-70014537 MsG0380015426.01.T01:intron 40.0%
! GTGTTGTGGCATAGATTTTG+TGG - Chr3:70013606-70013625 MsG0380015426.01.T01:intron 40.0%
! TGCAAGCATTTTCTTGCTTC+TGG - Chr3:70014184-70014203 MsG0380015426.01.T01:intron 40.0%
! TGCAAGCATTTTCTTGCTTC+TGG + Chr3:70014203-70014184 None:intergenic 40.0%
! TTTGGCTTAAATGTGTGAGC+AGG - Chr3:70015117-70015136 MsG0380015426.01.T01:intron 40.0%
!! AAGGAGAGTGTTCTGAGAAT+GGG - Chr3:70013296-70013315 MsG0380015426.01.T01:CDS 40.0%
!! ATAGTTTTGCTACCTGGCAT+AGG - Chr3:70013694-70013713 MsG0380015426.01.T01:intron 40.0%
!! CACTTCTGCGTTTTTGATTG+AGG - Chr3:70016441-70016460 MsG0380015426.01.T01:intron 40.0%
!! GTTGGTAATCATCCATGAGT+TGG + Chr3:70013887-70013906 None:intergenic 40.0%
!! TAAGGAGAGTGTTCTGAGAA+TGG - Chr3:70013295-70013314 MsG0380015426.01.T01:CDS 40.0%
!! TATCACCAACAGGGTGTTTT+GGG - Chr3:70017487-70017506 MsG0380015426.01.T01:intron 40.0%
!! TGTGGATGGATTTTCTACCT+TGG + Chr3:70017848-70017867 None:intergenic 40.0%
AAAACTATATCTGCCGTGCC+TGG + Chr3:70015375-70015394 None:intergenic 45.0%
AAATGGTGTGCAGATGCAAC+TGG + Chr3:70015184-70015203 None:intergenic 45.0%
AACCACAAGACACCAACTCA+TGG - Chr3:70013872-70013891 MsG0380015426.01.T01:intron 45.0%
AATGGTGTGCAGATGCAACT+GGG + Chr3:70015183-70015202 None:intergenic 45.0%
AATGTTGAAGGGACTCCAAC+AGG - Chr3:70014548-70014567 MsG0380015426.01.T01:intron 45.0%
ACCACGTTAAGCTATTCCAC+TGG + Chr3:70013577-70013596 None:intergenic 45.0%
ACGACATCTGAACCGTAACT+CGG - Chr3:70014317-70014336 MsG0380015426.01.T01:intron 45.0%
ACTAAGGCATGTGTTCATGC+GGG - Chr3:70014990-70015009 MsG0380015426.01.T01:intron 45.0%
ATGCTGCAAATGATTGACCC+AGG + Chr3:70015922-70015941 None:intergenic 45.0%
ATGCTTCTGACCTGTTACCT+GGG - Chr3:70015902-70015921 MsG0380015426.01.T01:intron 45.0%
ATGTGAAAGGGACCGAGTTA+CGG + Chr3:70014332-70014351 None:intergenic 45.0%
CAGCCGAGAACAAAAATCAC+AGG + Chr3:70013064-70013083 None:intergenic 45.0%
CAGCGTTAGTTGAAGTCATG+AGG - Chr3:70018400-70018419 MsG0380015426.01.T01:intron 45.0%
CCTCTGTCGTGAAGTTACTA+AGG - Chr3:70014974-70014993 MsG0380015426.01.T01:intron 45.0%
CCTTAGTAACTTCACGACAG+AGG + Chr3:70014977-70014996 None:intergenic 45.0%
CTAAATCTACTGAGTTCGCC+CGG - Chr3:70014292-70014311 MsG0380015426.01.T01:intron 45.0%
CTCTCTCTCGAATGATGCAT+TGG + Chr3:70013199-70013218 None:intergenic 45.0%
GAAAATCGCAAATCGCAAGC+AGG - Chr3:70012911-70012930 MsG0380015426.01.T01:three_prime_UTR 45.0%
GCAATAAGGTTTGTCAAGGC+TGG - Chr3:70015982-70016001 MsG0380015426.01.T01:intron 45.0%
GCATGGAAGTCAGCAACAAA+GGG + Chr3:70015539-70015558 None:intergenic 45.0%
GCTGTTTATCCAAACAGGTC+AGG + Chr3:70014291-70014272 None:intergenic 45.0%
GGCTCGCACAACATTATTAC+CGG - Chr3:70014462-70014481 MsG0380015426.01.T01:intron 45.0%
GGGCATAGTTCTCATTCTCA+TGG - Chr3:70013389-70013408 MsG0380015426.01.T01:intron 45.0%
GTGCTTCGAAGATGAGTGAA+AGG + Chr3:70014422-70014441 None:intergenic 45.0%
GTGGTACTATCGTTGTGTTG+TGG - Chr3:70013592-70013611 MsG0380015426.01.T01:intron 45.0%
GTGTCAATCCTATTGTCCAG+TGG - Chr3:70013558-70013577 MsG0380015426.01.T01:intron 45.0%
GTTGGAAAGATGGTGTGTGT+GGG - Chr3:70013716-70013735 MsG0380015426.01.T01:intron 45.0%
TAGTAACTTCACGACAGAGG+TGG + Chr3:70014974-70014993 None:intergenic 45.0%
TATGCTTCTGACCTGTTACC+TGG - Chr3:70015901-70015920 MsG0380015426.01.T01:intron 45.0%
TCACAGGAAAATCGCAGTTG+CGG + Chr3:70013048-70013067 None:intergenic 45.0%
TCCAGTGGAATAGCTTAACG+TGG - Chr3:70013573-70013592 MsG0380015426.01.T01:intron 45.0%
TCGACGCGGAAGAAAATTGA+AGG + Chr3:70014503-70014522 None:intergenic 45.0%
TGCATCTGCACACCATTTAC+TGG - Chr3:70015186-70015205 MsG0380015426.01.T01:intron 45.0%
TGCATGGAAGTCAGCAACAA+AGG + Chr3:70015540-70015559 None:intergenic 45.0%
TGTATCCCAAAACACCCTGT+TGG + Chr3:70017495-70017514 None:intergenic 45.0%
TTGGAAAGATGGTGTGTGTG+GGG - Chr3:70013717-70013736 MsG0380015426.01.T01:intron 45.0%
TTGTAGGGTCTTCTGTTGGA+AGG - Chr3:70018240-70018259 MsG0380015426.01.T01:intron 45.0%
TTTACCATTGCAACCAGGCA+CGG - Chr3:70015359-70015378 MsG0380015426.01.T01:intron 45.0%
TTTACTGGACATGGGACTTG+AGG - Chr3:70018959-70018978 MsG0380015426.01.T01:intron 45.0%
! ACTGAAGAACCGATTCTCTC+GGG - Chr3:70014440-70014459 MsG0380015426.01.T01:intron 45.0%
! CACTGAAGAACCGATTCTCT+CGG - Chr3:70014439-70014458 MsG0380015426.01.T01:intron 45.0%
! GCACGGCAGATATAGTTTTC+AGG - Chr3:70015376-70015395 MsG0380015426.01.T01:intron 45.0%
! GTCAAAAGGCACAAGAACCA+AGG + Chr3:70013170-70013189 None:intergenic 45.0%
! GTGGCATAGATTTTGTGGAC+TGG - Chr3:70013611-70013630 MsG0380015426.01.T01:intron 45.0%
! TACGGTTCAGATGTCGTTTC+CGG + Chr3:70014314-70014333 None:intergenic 45.0%
! TTCAATGAAGAAGCACACGC+TGG - Chr3:70017804-70017823 MsG0380015426.01.T01:CDS 45.0%
! TTTTGCTACCTGGCATAGGT+TGG - Chr3:70013698-70013717 MsG0380015426.01.T01:intron 45.0%
!! ATCCATGAGTTGGTGTCTTG+TGG + Chr3:70013877-70013896 None:intergenic 45.0%
!! GTATCACCAACAGGGTGTTT+TGG - Chr3:70017486-70017505 MsG0380015426.01.T01:intron 45.0%
!! GTTTTAGACCCTGACCTGTT+TGG - Chr3:70016883-70016902 MsG0380015426.01.T01:CDS 45.0%
!!! AACAGGGTGTTTTGGGATAC+AGG - Chr3:70017494-70017513 MsG0380015426.01.T01:intron 45.0%
!!! ATATAATTAATTATATTTTC+TGG - Chr3:70018565-70018584 MsG0380015426.01.T01:intron 5.0%
!!! ATTTTTTTTTTTTTTGTAAT+AGG + Chr3:70013786-70013805 None:intergenic 5.0%
ATGATGGCAACAGCGTCACT+AGG + Chr3:70018270-70018289 None:intergenic 50.0%
ATTGCAAGAGCCGAGAGACT+CGG + Chr3:70014384-70014403 None:intergenic 50.0%
CAACCAAGCATTTGGAGGCA+TGG + Chr3:70014718-70014737 None:intergenic 50.0%
CAGGGGACTAAACACAAAGC+AGG + Chr3:70015575-70015594 None:intergenic 50.0%
CCATCTTTCCAACCTATGCC+AGG + Chr3:70013709-70013728 None:intergenic 50.0%
CGGGCGAACTCAGTAGATTT+AGG + Chr3:70014294-70014313 None:intergenic 50.0%
GACCACAACCAAGCATTTGG+AGG + Chr3:70014723-70014742 None:intergenic 50.0%
GAGCAGGAAAGAAGGCTTTG+TGG - Chr3:70015133-70015152 MsG0380015426.01.T01:intron 50.0%
GATCCATGCCTCCAAATGCT+TGG - Chr3:70014712-70014731 MsG0380015426.01.T01:CDS 50.0%
GGTTGGAAAGATGGTGTGTG+TGG - Chr3:70013715-70013734 MsG0380015426.01.T01:intron 50.0%
TGCCTCCAAATGCTTGGTTG+TGG - Chr3:70014718-70014737 MsG0380015426.01.T01:CDS 50.0%
TGTATCGCGATGCGTATCGT+AGG - Chr3:70017642-70017661 MsG0380015426.01.T01:intron 50.0%
! ACGGTAACGGCGTTCCTTAA+CGG - Chr3:70013022-70013041 MsG0380015426.01.T01:three_prime_UTR 50.0%
! ACGGTTCAGATGTCGTTTCC+GGG + Chr3:70014313-70014332 None:intergenic 50.0%
! CCTGGCATAGGTTGGAAAGA+TGG - Chr3:70013706-70013725 MsG0380015426.01.T01:intron 50.0%
! CTGAAGAACCGATTCTCTCG+GGG - Chr3:70014441-70014460 MsG0380015426.01.T01:intron 50.0%
!! ACTTGGTGCCTGTGTGTGTA+TGG - Chr3:70015620-70015639 MsG0380015426.01.T01:intron 50.0%
AATCGCAGTTGCGGCCGTTA+AGG + Chr3:70013039-70013058 None:intergenic 55.0%
AATCGGAAACGGCAAGCAGC+AGG - Chr3:70012857-70012876 MsG0380015426.01.T01:three_prime_UTR 55.0%
AGACATAGATCGAGGGCAGC+AGG - Chr3:70017117-70017136 MsG0380015426.01.T01:intron 55.0%
CAAATGCTCGCCGAGTCTCT+CGG - Chr3:70014371-70014390 MsG0380015426.01.T01:intron 55.0%
! AAGAAGCACACGCTGGCAAC+TGG - Chr3:70017811-70017830 MsG0380015426.01.T01:CDS 55.0%
! CATGCGGGAGCCCTTGATTT+TGG - Chr3:70015005-70015024 MsG0380015426.01.T01:intron 55.0%
TCTGCCGTGCCTGGTTGCAA+TGG + Chr3:70015366-70015385 None:intergenic 60.0%
TGTGCGAGCCCCGAGAGAAT+CGG + Chr3:70014452-70014471 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 70012843 70019430 70012843 ID=MsG0380015426.01;Name=MsG0380015426.01
Chr3 mRNA 70012843 70019430 70012843 ID=MsG0380015426.01.T01;Parent=MsG0380015426.01;Name=MsG0380015426.01.T01;_AED=0.35;_eAED=0.35;_QI=183|0.5|0.72|0.90|0.8|0.63|11|364|347
Chr3 exon 70012843 70012952 70012843 ID=MsG0380015426.01.T01:exon:352;Parent=MsG0380015426.01.T01
Chr3 exon 70012988 70013361 70012988 ID=MsG0380015426.01.T01:exon:351;Parent=MsG0380015426.01.T01
Chr3 exon 70013968 70014027 70013968 ID=MsG0380015426.01.T01:exon:350;Parent=MsG0380015426.01.T01
Chr3 exon 70014666 70014757 70014666 ID=MsG0380015426.01.T01:exon:349;Parent=MsG0380015426.01.T01
Chr3 exon 70016213 70016334 70016213 ID=MsG0380015426.01.T01:exon:348;Parent=MsG0380015426.01.T01
Chr3 exon 70016876 70016982 70016876 ID=MsG0380015426.01.T01:exon:347;Parent=MsG0380015426.01.T01
Chr3 exon 70017066 70017134 70017066 ID=MsG0380015426.01.T01:exon:346;Parent=MsG0380015426.01.T01
Chr3 exon 70017230 70017411 70017230 ID=MsG0380015426.01.T01:exon:345;Parent=MsG0380015426.01.T01
Chr3 exon 70017517 70017612 70017517 ID=MsG0380015426.01.T01:exon:344;Parent=MsG0380015426.01.T01
Chr3 exon 70017704 70017984 70017704 ID=MsG0380015426.01.T01:exon:343;Parent=MsG0380015426.01.T01
Chr3 exon 70019333 70019430 70019333 ID=MsG0380015426.01.T01:exon:342;Parent=MsG0380015426.01.T01
Chr3 five_prime_UTR 70019333 70019430 70019333 ID=MsG0380015426.01.T01:five_prime_utr;Parent=MsG0380015426.01.T01
Chr3 five_prime_UTR 70017900 70017984 70017900 ID=MsG0380015426.01.T01:five_prime_utr;Parent=MsG0380015426.01.T01
Chr3 CDS 70017704 70017899 70017704 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 CDS 70017517 70017612 70017517 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 CDS 70017230 70017411 70017230 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 CDS 70017066 70017134 70017066 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 CDS 70016876 70016982 70016876 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 CDS 70016213 70016334 70016213 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 CDS 70014666 70014757 70014666 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 CDS 70013968 70014027 70013968 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 CDS 70013242 70013361 70013242 ID=MsG0380015426.01.T01:cds;Parent=MsG0380015426.01.T01
Chr3 three_prime_UTR 70012988 70013241 70012988 ID=MsG0380015426.01.T01:three_prime_utr;Parent=MsG0380015426.01.T01
Chr3 three_prime_UTR 70012843 70012952 70012843 ID=MsG0380015426.01.T01:three_prime_utr;Parent=MsG0380015426.01.T01
Gene Sequence

>MsG0380015426.01.T01

ATGCTCGCCGAGTCTCTCGGCTCTTGCAATCTCCGACTTTCCTTTCCTTTCACTCATCTTCGAAGCACTGAAGAACCGATTCTCTCGGGGCTCGCACAACATTATTACCGGCAAGTGAAATCTGAACCTTCAATTTTCTTCCGCGTCGAAGCTTTTTACAGTTCTGGAGTTGATAATGTTGAAGGGACTCCAACAGATGCTGTGAAGAATCTTTATGATAAGATGCTTGAGTCTGTAAATGTTAAACGATCCATGCCTCCAAATGCTTGGTTGTGGTCAATGATCGCTAATTTTATCATTATTTTTTTTATATTGATTCACTCTCTTTGCTATGATGTTGAATTTAATCTATTTGATGAGCAGAGGTTGTCAAATCTTCGCATACATGACAATTTTAACTGCCACCTCTGTCGTGAAGTTACTAAGGCATGTGTTCATGCGGGAGCCCTTGATTTTGGTATGCTTTATTTGCGTGAAAGAAGGCTTTGTGGAAGCATAATGTCTATGGATTGGCACCCAGTTGCATCTGCACACCATTTACTGCTTTTTGCTAAGAACAACAATGATACTAAACTATTGGTGGAGGTAATGAAACTTTTGAAGAAGAATGATTTACCATTGCAACCAGGCACGGCAGATATAGTTTTCAGCATTTGTTACAATACAGATGAATGGGAGTTGATTAATAAGTATGCAATAAGGTTTGTCAAGGCTGGTGTAAAACTACGTGAAACCTCATTTGACACATGGATGAAATTTGCTGCTAAAAGAGGAGTAAGATACGTAACAGTGAAGGGTGTTTTCGTACCGTATCGCGATTTGTATCGTATGTATTATAGGATACAAGGTGTTCTGGGATATAGAGGTCTTCTGTTGGAAGGTAAGCCTAGTGACGCTGTTGCCATCATTCAAGATCTAAATCAGGCATTAGCAGTCTCTTTGAAATCTGATATTCTTGCAATGGTTAATGATTTACTGGACATGGGACTTGAGGCAAATATAAGTTTGGAAGACCTAAACAGAAGAGAAGAAGTTCCACAATAG

Protein sequence

>MsG0380015426.01.T01

MLAESLGSCNLRLSFPFTHLRSTEEPILSGLAQHYYRQVKSEPSIFFRVEAFYSSGVDNVEGTPTDAVKNLYDKMLESVNVKRSMPPNAWLWSMIANFIIIFFILIHSLCYDVEFNLFDEQRLSNLRIHDNFNCHLCREVTKACVHAGALDFGMLYLRERRLCGSIMSMDWHPVASAHHLLLFAKNNNDTKLLVEVMKLLKKNDLPLQPGTADIVFSICYNTDEWELINKYAIRFVKAGVKLRETSFDTWMKFAAKRGVRYVTVKGVFVPYRDLYRMYYRIQGVLGYRGLLLEGKPSDAVAIIQDLNQALAVSLKSDILAMVNDLLDMGLEANISLEDLNRREEVPQ*