AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0017240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017240 MtrunA17_Chr1g0167801 94.510 765 26 1 61 825 1 749 0.0 1479
Msa0017240 MtrunA17_Chr1g0168791 94.248 765 28 1 61 825 1 749 0.0 1473
Msa0017240 MtrunA17_Chr3g0091581 45.679 810 403 9 6 806 9 790 0.0 710
Msa0017240 MtrunA17_Chr3g0091591 48.427 731 346 8 82 806 8 713 0.0 704
Msa0017240 MtrunA17_Chr8g0350601 48.895 724 341 7 88 806 1 700 0.0 702
Msa0017240 MtrunA17_Chr5g0428341 48.327 747 349 8 88 829 1 715 0.0 701
Msa0017240 MtrunA17_Chr2g0299741 44.053 824 404 12 6 806 24 813 0.0 687
Msa0017240 MtrunA17_Chr1g0168781 95.703 256 11 0 855 1110 14 269 1.01e-180 528
Msa0017240 MtrunA17_Chr8g0384341 36.230 817 466 17 6 804 13 792 3.87e-162 501
Msa0017240 MtrunA17_Chr2g0280951 34.266 858 499 20 6 849 19 825 1.55e-158 491
Msa0017240 MtrunA17_Chr3g0130301 35.600 809 480 15 6 804 14 791 2.98e-157 488
Msa0017240 MtrunA17_Chr5g0397051 32.595 813 481 21 13 806 18 782 4.40e-124 399
Msa0017240 MtrunA17_Chr5g0397041 31.098 820 484 21 12 806 17 780 4.96e-117 380
Msa0017240 MtrunA17_Chr7g0262911 31.412 850 485 22 12 818 6 800 2.65e-109 360
Msa0017240 MtrunA17_Chr4g0039911 30.012 823 512 16 4 803 6 787 3.35e-107 355
Msa0017240 MtrunA17_Chr4g0069671 31.144 822 501 17 5 803 7 786 5.51e-107 354
Msa0017240 MtrunA17_Chr7g0262901 32.515 855 497 24 12 817 10 833 6.86e-105 349
Msa0017240 MtrunA17_Chr5g0397061 31.322 696 409 21 127 803 1 646 6.42e-93 311
Msa0017240 MtrunA17_Chr8g0355861 55.263 266 103 7 855 1110 15 274 5.09e-92 295
Msa0017240 MtrunA17_Chr8g0355321 51.475 305 89 6 854 1103 5 305 3.62e-91 294
Msa0017240 MtrunA17_Chr3g0106471 27.565 809 515 19 6 802 29 778 8.92e-87 298
Msa0017240 MtrunA17_Chr5g0432141 27.831 830 513 22 9 816 26 791 9.04e-84 290
Msa0017240 MtrunA17_Chr3g0114261 27.273 825 520 21 2 807 8 771 2.02e-83 289
Msa0017240 MtrunA17_Chr5g0432151 28.049 820 514 21 14 816 27 787 5.25e-81 282
Msa0017240 MtrunA17_Chr4g0013341 26.002 823 551 24 10 812 3 787 6.42e-74 261
Msa0017240 MtrunA17_Chr8g0355311 65.556 180 58 4 933 1110 24 201 2.99e-72 238
Msa0017240 MtrunA17_Chr5g0432131 25.659 721 464 18 100 802 1 667 6.14e-69 245
Msa0017240 MtrunA17_Chr3g0131701 26.322 813 523 24 7 798 31 788 1.05e-67 244
Msa0017240 MtrunA17_Chr6g0470261 25.733 750 469 20 81 802 63 752 8.90e-67 240
Msa0017240 MtrunA17_Chr2g0318931 45.660 265 123 8 850 1101 15 271 2.24e-66 225
Msa0017240 MtrunA17_Chr8g0355871 54.589 207 87 3 910 1110 31 236 2.70e-66 223
Msa0017240 MtrunA17_Chr6g0455471 26.129 819 532 21 4 802 20 785 3.00e-66 239
Msa0017240 MtrunA17_Chr3g0114191 27.195 820 533 24 13 810 72 849 2.87e-65 238
Msa0017240 MtrunA17_Chr3g0140801 25.403 807 531 21 33 812 22 784 3.51e-65 236
Msa0017240 MtrunA17_Chr2g0318901 42.969 256 127 6 855 1101 15 260 1.42e-64 219
Msa0017240 MtrunA17_Chr8g0355331 64.198 162 53 2 953 1110 275 435 2.55e-64 224
Msa0017240 MtrunA17_Chr8g0355331 48.837 86 42 2 855 940 14 97 2.80e-17 85.9
Msa0017240 MtrunA17_Chr5g0432121 24.967 749 492 19 70 802 6 700 3.30e-64 232
Msa0017240 MtrunA17_Chr7g0234551 26.044 814 500 22 24 807 64 805 2.45e-63 231
Msa0017240 MtrunA17_Chr7g0234521 25.921 814 501 22 24 807 64 805 4.82e-63 230
Msa0017240 MtrunA17_Chr7g0234431 26.536 814 496 24 24 807 21 762 5.56e-62 226
Msa0017240 MtrunA17_Chr8g0355841 66.242 157 48 2 958 1110 368 523 6.05e-62 220
Msa0017240 MtrunA17_Chr8g0355841 57.746 71 28 2 855 925 14 82 1.19e-12 72.0
Msa0017240 MtrunA17_Chr8g0378261 24.845 805 537 18 14 802 37 789 1.50e-61 225
Msa0017240 MtrunA17_Chr5g0441291 26.002 823 528 21 14 807 50 820 1.71e-61 226
Msa0017240 MtrunA17_Chr5g0441281 25.604 828 510 23 14 807 50 805 2.04e-61 225
Msa0017240 MtrunA17_Chr5g0441061 25.725 828 531 25 5 804 19 790 6.57e-61 224
Msa0017240 MtrunA17_Chr3g0121481 26.011 742 473 22 91 819 13 691 1.95e-60 220
Msa0017240 MtrunA17_Chr5g0441051 25.596 797 509 23 33 804 56 793 3.88e-59 218
Msa0017240 MtrunA17_Chr2g0318871 41.245 257 130 8 855 1101 15 260 6.49e-59 204
Msa0017240 MtrunA17_Chr3g0114181 24.818 826 548 23 13 813 32 809 5.81e-58 215
Msa0017240 MtrunA17_Chr8g0355831 63.030 165 56 2 950 1110 202 365 1.36e-57 203
Msa0017240 MtrunA17_Chr8g0355831 43.802 121 43 5 857 954 16 134 1.74e-18 89.0
Msa0017240 MtrunA17_Chr5g0441041 25.693 794 515 21 30 804 53 790 1.22e-56 211
Msa0017240 MtrunA17_Chr7g0234531 25.567 661 399 17 171 807 21 612 8.56e-52 193
Msa0017240 MtrunA17_Chr3g0089271 25.286 787 503 20 45 803 36 765 3.02e-50 191
Msa0017240 MtrunA17_Chr3g0106371 31.358 405 228 10 407 802 552 915 2.42e-48 187
Msa0017240 MtrunA17_Chr3g0106371 24.661 369 262 6 41 399 70 432 9.46e-25 111
Msa0017240 MtrunA17_Chr7g0253481 30.500 400 231 10 420 802 1 370 1.66e-43 164
Msa0017240 MtrunA17_Chr4g0019401 31.620 389 235 11 425 803 17 384 4.23e-42 159
Msa0017240 MtrunA17_Chr7g0253491 29.829 409 257 9 6 396 21 417 2.73e-40 155
Msa0017240 MtrunA17_Chr7g0262891 31.793 368 217 9 461 805 13 369 2.62e-39 151
Msa0017240 MtrunA17_Chr3g0106451 26.329 395 239 12 420 802 1 355 4.71e-38 146
Msa0017240 MtrunA17_Chr1g0167791 96.774 62 2 0 3 64 1 62 1.53e-34 126
Msa0017240 MtrunA17_Chr1g0168801 96.774 62 2 0 3 64 1 62 1.53e-34 126
Msa0017240 MtrunA17_Chr1g0147261 34.021 291 138 14 855 1098 14 297 2.06e-34 134
Msa0017240 MtrunA17_Chr1g0147311 31.329 316 145 9 855 1099 40 354 8.08e-33 131
Msa0017240 MtrunA17_Chr3g0139431 31.250 304 138 10 865 1101 23 322 6.54e-31 124
Msa0017240 MtrunA17_Chr5g0437801 32.153 339 181 12 478 805 1 301 1.44e-30 124
Msa0017240 MtrunA17_Chr1g0147251 35.135 222 112 10 903 1098 25 240 1.10e-28 115
Msa0017240 MtrunA17_Chr7g0262881 35.260 173 95 2 270 441 2 158 1.54e-28 112
Msa0017240 MtrunA17_Chr7g0234501 23.034 534 354 12 24 538 64 559 7.23e-28 120
Msa0017240 MtrunA17_Chr1g0147331 29.393 313 143 13 860 1099 16 323 2.28e-26 111
Msa0017240 MtrunA17_Chr1g0146631 42.361 144 76 5 962 1099 181 323 5.08e-26 110
Msa0017240 MtrunA17_Chr1g0147301 31.276 243 141 6 882 1099 42 283 5.57e-26 109
Msa0017240 MtrunA17_Chr3g0106461 23.038 395 293 5 6 394 24 413 3.95e-25 110
Msa0017240 MtrunA17_Chr1g0147291 34.389 221 112 9 906 1099 51 265 5.24e-25 105
Msa0017240 MtrunA17_Chr1g0147241 31.169 308 137 14 855 1098 14 310 8.87e-25 106
Msa0017240 MtrunA17_Chr3g0113371 42.958 142 52 5 667 808 1 113 1.54e-24 99.8
Msa0017240 MtrunA17_Chr7g0262871 34.021 194 127 1 12 204 10 203 2.17e-24 103
Msa0017240 MtrunA17_Chr1g0147321 33.484 221 114 9 906 1099 22 236 4.60e-24 102
Msa0017240 MtrunA17_Chr1g0147271 40.136 147 76 4 962 1099 240 383 4.08e-23 103
Msa0017240 MtrunA17_Chr3g0144421 34.014 147 89 5 962 1100 156 302 7.92e-18 85.9
Msa0017240 MtrunA17_Chr4g0034821 34.437 151 84 5 962 1100 144 291 4.26e-15 77.4
Msa0017240 MtrunA17_Chr3g0138231 32.432 148 91 5 962 1100 119 266 8.18e-14 73.2
Msa0017240 MtrunA17_Chr4g0034721 27.666 347 195 17 788 1100 252 576 3.73e-13 73.6
Msa0017240 MtrunA17_Chr4g0019411 24.513 359 230 12 45 380 36 376 6.88e-13 72.0
Msa0017240 MtrunA17_Chr3g0144451 30.872 149 94 4 962 1101 128 276 3.10e-12 68.6
Msa0017240 MtrunA17_Chr3g0144391 30.667 150 95 4 960 1100 356 505 3.12e-12 70.5
Msa0017240 MtrunA17_Chr7g0234491 29.240 171 93 5 639 807 2 146 9.50e-12 64.3
Msa0017240 MtrunA17_Chr3g0144411 30.000 150 96 4 960 1100 389 538 1.74e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017240 AT2G13620.1 36.319 815 464 16 6 804 15 790 2.01e-156 486
Msa0017240 AT1G05580.1 33.293 820 491 14 6 809 26 805 6.16e-143 452
Msa0017240 AT2G31910.1 34.017 829 482 15 6 817 21 801 1.01e-134 429
Msa0017240 AT1G05580.2 34.060 734 431 13 89 809 1 694 5.66e-132 419
Msa0017240 AT2G31910.3 34.309 752 423 14 89 817 1 704 9.19e-123 394
Msa0017240 AT2G31910.2 34.309 752 423 14 89 817 1 704 9.19e-123 394
Msa0017240 AT5G41610.1 30.637 816 511 21 5 803 8 785 2.12e-110 363
Msa0017240 AT5G41610.3 30.637 816 511 21 5 803 8 785 2.12e-110 363
Msa0017240 AT4G23700.2 31.001 829 510 20 5 807 7 799 5.04e-109 360
Msa0017240 AT4G23700.1 31.001 829 510 20 5 807 7 799 5.04e-109 360
Msa0017240 AT3G53720.1 29.954 878 525 20 7 835 3 839 1.12e-106 354
Msa0017240 AT3G17630.1 30.086 811 506 18 6 803 10 772 8.95e-103 342
Msa0017240 AT3G17630.2 30.086 811 506 18 6 803 10 772 8.95e-103 342
Msa0017240 AT5G41610.2 31.025 751 463 21 70 803 5 717 9.07e-99 330
Msa0017240 AT1G64170.1 29.172 833 508 17 2 803 11 792 3.27e-94 319
Msa0017240 AT3G53720.2 30.091 771 449 21 114 836 39 767 6.39e-94 317
Msa0017240 AT1G06970.1 26.533 848 529 29 6 827 28 807 3.57e-71 254
Msa0017240 AT5G22900.1 26.342 801 496 21 43 802 70 817 1.09e-68 247
Msa0017240 AT5G37060.1 25.441 794 514 13 49 808 86 835 2.27e-68 247
Msa0017240 AT3G44900.1 26.087 805 489 23 43 802 69 812 3.66e-67 243
Msa0017240 AT2G28180.1 27.792 770 487 23 52 802 89 808 1.17e-65 238
Msa0017240 AT5G58460.1 25.221 793 515 17 43 802 80 827 1.85e-64 236
Msa0017240 AT2G30240.1 27.819 816 510 24 6 802 30 785 5.82e-63 231
Msa0017240 AT1G08150.1 25.944 821 514 23 11 796 41 802 1.94e-61 226
Msa0017240 AT1G08140.1 25.679 736 465 22 92 802 125 803 2.09e-57 214
Msa0017240 AT3G52080.1 27.376 789 510 24 39 802 34 784 2.60e-55 207
Msa0017240 AT5G01690.1 25.765 784 480 24 47 802 58 767 6.22e-55 206
Msa0017240 AT1G79400.1 24.177 790 560 17 22 802 13 772 3.51e-53 201
Msa0017240 AT1G16380.1 24.314 802 548 23 22 803 13 775 1.94e-49 189
Msa0017240 AT1G08135.1 24.969 801 509 23 28 802 60 794 1.16e-48 187
Msa0017240 AT2G28170.1 24.251 734 473 21 92 802 125 798 1.60e-48 187
Msa0017240 AT3G44910.1 23.962 626 409 16 171 788 186 752 3.71e-48 185
Msa0017240 AT3G44930.1 24.015 812 518 24 15 793 24 769 5.84e-48 184
Msa0017240 AT5G01680.1 23.274 782 514 21 48 804 57 777 9.90e-45 175
Msa0017240 AT5G22910.1 24.938 806 487 26 28 788 49 781 2.88e-44 173
Msa0017240 AT3G44920.1 23.436 815 533 21 15 800 24 776 6.74e-41 163
Msa0017240 AT5G25610.1 33.333 213 123 8 899 1098 183 389 1.88e-24 107

Find 229 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTAAAGCTTATCTATTT+TGG 0.117034 1_1:-28611769 Msa0017240:CDS
TGTTCATTGTGGCTTATTTC+TGG 0.136521 1_1:+28610231 None:intergenic
GATCATGTCATTTCACATTT+TGG 0.159149 1_1:-28607050 Msa0017240:CDS
AAGATTATTGGCAAAGTATT+TGG 0.175776 1_1:-28607488 Msa0017240:CDS
CCAAAAGATTATAAGCAATT+TGG 0.203510 1_1:+28613047 None:intergenic
CTGTGTCCTGTTTACTTTGC+TGG 0.209220 1_1:-28611293 Msa0017240:CDS
TGATTCCTGCTGCTAATAAT+TGG 0.216165 1_1:-28611604 Msa0017240:CDS
AGGTTTAATGATGCTTATTA+TGG 0.218991 1_1:-28611222 Msa0017240:CDS
CATATGTTGGACGTATTTAC+AGG 0.219455 1_1:-28611455 Msa0017240:CDS
CCAAATTGCTTATAATCTTT+TGG 0.236918 1_1:-28613047 Msa0017240:CDS
CCTGTTTACTTTGCTGGATT+TGG 0.247952 1_1:-28611287 Msa0017240:CDS
CACTGTCTCCAGAAGATTAT+TGG 0.258323 1_1:-28607500 Msa0017240:CDS
ATACTTTGCCAATAATCTTC+TGG 0.265502 1_1:+28607492 None:intergenic
GATTCATGCAATCACAATTA+AGG 0.265914 1_1:-28610686 Msa0017240:CDS
GATTGCATGAATCGGAATTT+TGG 0.275505 1_1:+28610696 None:intergenic
TTGCCATTTCATTGGCAATA+AGG 0.281722 1_1:-28606736 Msa0017240:CDS
CATCCTGAACTTGGTGTTAT+AGG 0.299584 1_1:-28609691 Msa0017240:CDS
ATCAAAGAGCTCAAAACTTT+TGG 0.303601 1_1:+28611185 None:intergenic
GTTTATTTGTTCGTATATTA+CGG 0.316727 1_1:-28611429 Msa0017240:CDS
TCATGGAAAGTTTGCTGATA+TGG 0.318077 1_1:-28611351 Msa0017240:CDS
TGGAGAATGGCAGGGCATTC+AGG 0.318873 1_1:-28610057 Msa0017240:CDS
CCTGGAAAGAAAATGATCTT+AGG 0.324297 1_1:-28607245 Msa0017240:CDS
GACATGTACCGGTGAAATTC+TGG 0.326982 1_1:+28610557 None:intergenic
TTAGTGCTTCAAACAATATC+TGG 0.332876 1_1:-28613114 Msa0017240:CDS
CTTTGGGAGACACGAAATTC+AGG 0.340437 1_1:-28611242 Msa0017240:CDS
ATATTAGCTTCAACTAGTTT+TGG 0.343172 1_1:-28609664 Msa0017240:CDS
ATGTCAGATGACTTTGTTAC+TGG 0.346594 1_1:-28611320 Msa0017240:CDS
ACTCGACTTGCCAGTACTTT+GGG 0.350748 1_1:-28611258 Msa0017240:CDS
CGCATTATAACCCTCTTCAT+TGG 0.350951 1_1:-28610114 Msa0017240:CDS
TTCTGTTAGTCGAAGTCTAT+TGG 0.352920 1_1:-28612038 Msa0017240:CDS
TTGCCAATGAAATGGCAAAC+TGG 0.356463 1_1:+28606741 None:intergenic
CTCTTTGTTCGCCAGCCATA+TGG 0.362980 1_1:+28607157 None:intergenic
TGTTGTTTAAATGATCCATC+TGG 0.363062 1_1:+28610481 None:intergenic
GGCACTAGCATGGCAATTGC+TGG 0.363689 1_1:-28611869 Msa0017240:CDS
TCTGTTAGTCGAAGTCTATT+GGG 0.365037 1_1:-28612037 Msa0017240:CDS
GATTCCTGCTGCTAATAATT+GGG 0.368636 1_1:-28611603 Msa0017240:CDS
TTTGGATCCATGTTCTTTCA+TGG 0.370242 1_1:-28610784 Msa0017240:CDS
TGTTGAAACCATTTCAAACT+TGG 0.371708 1_1:-28611963 Msa0017240:CDS
GCCTTAGGAAGAGGAGTGTT+TGG 0.372579 1_1:+28607465 None:intergenic
ATTGTGACATCAATGTTATT+TGG 0.373128 1_1:-28611845 Msa0017240:CDS
GATCATGTTAGTTGCATGTT+TGG 0.374576 1_1:+28610605 None:intergenic
CGAGTATTGGTTCAATTCTT+CGG 0.378380 1_1:+28607295 None:intergenic
GCCACATGTTCTTATTTGTT+CGG 0.380782 1_1:+28611486 None:intergenic
AAAATGTTGCTTGGGACAAA+AGG 0.381055 1_1:-28611073 Msa0017240:CDS
AACTCGACTTGCCAGTACTT+TGG 0.386014 1_1:-28611259 Msa0017240:CDS
TTTCTTCCTTGATCTTAAGA+TGG 0.386856 1_1:+28611892 None:intergenic
CATAATTCCCAAGTTTGAAA+TGG 0.393252 1_1:+28611955 None:intergenic
AGAAAACATCTTTGTTTGTA+GGG 0.393444 1_1:-28610954 Msa0017240:CDS
TGAAATTCTGGTAGCATTTG+TGG 0.393603 1_1:+28610569 None:intergenic
GCCTTAGCTTTACCTCCATC+AGG 0.395109 1_1:+28606846 None:intergenic
TTGTTCTGTAGCGATCTTTG+TGG 0.395265 1_1:-28610172 Msa0017240:CDS
GAGAAAACATCTTTGTTTGT+AGG 0.398790 1_1:-28610955 Msa0017240:CDS
TGGTAGCATTTGTGGCTTCA+AGG 0.400607 1_1:+28610577 None:intergenic
GTCCCAGTTTGCCATTTCAT+TGG 0.402748 1_1:-28606744 Msa0017240:CDS
TGGAATGTTGTCGACTGTTA+TGG 0.405075 1_1:-28609947 Msa0017240:CDS
AAGGCGATTTCAAGTACCTT+TGG 0.407804 1_1:-28607014 Msa0017240:CDS
GGATATGATTTGTACATTGT+TGG 0.414314 1_1:-28609769 Msa0017240:CDS
GTTGTGAGGATCCATTTGTT+AGG 0.416084 1_1:-28610021 Msa0017240:CDS
AGGATGGTCCTCAGAATGAT+TGG 0.418278 1_1:+28606698 None:intergenic
CGCTATTCTTGTTTCCCAGA+TGG 0.424218 1_1:-28610496 Msa0017240:CDS
CTTGGTACGCATCCTATTGT+CGG 0.424949 1_1:-28611401 Msa0017240:CDS
TTGTATATGGCATTTATTAA+CGG 0.425113 1_1:+28610720 None:intergenic
AATAGGTCAAAGAAAGCCTT+AGG 0.436492 1_1:+28607450 None:intergenic
TCATACTACAAAATGTTGCT+TGG 0.437404 1_1:-28611082 Msa0017240:CDS
GGCGCAGAAACAACCAACTA+TGG 0.437731 1_1:-28610453 Msa0017240:CDS
CCAAATCCAGCAAAGTAAAC+AGG 0.439549 1_1:+28611287 None:intergenic
GCAAAAGCTGAGGTTTGATA+TGG 0.439809 1_1:-28610658 Msa0017240:CDS
CAGCCTTATTGCCAATGAAA+TGG 0.440121 1_1:+28606733 None:intergenic
TTGCGTTCTCCTGTAGCGAT+TGG 0.441946 1_1:+28607104 None:intergenic
TCAATCTCATTAAGAAGTGT+TGG 0.444589 1_1:+28609799 None:intergenic
TCACTTCCTCCACCACATAT+TGG 0.445651 1_1:+28606979 None:intergenic
TGTAATAGTCCAATCGCTAC+AGG 0.447373 1_1:-28607113 Msa0017240:CDS
AACACAAAAGCTCCGACAAT+AGG 0.448117 1_1:+28611389 None:intergenic
ATTACTCACAAGGTAGCAAT+AGG 0.450327 1_1:+28607433 None:intergenic
GTACAATATGTGCAGCTTGT+TGG 0.450931 1_1:-28607983 Msa0017240:intron
GACAAGGCTTCACGGTCGTC+AGG 0.453318 1_1:+28610087 None:intergenic
AACCGCTTACGTGGTCTCAT+TGG 0.455055 1_1:-28606874 Msa0017240:CDS
AAAGTTTGCTGATATGGTTA+TGG 0.455489 1_1:-28611345 Msa0017240:CDS
CCTCCACCACATATTGGTCC+TGG 0.458272 1_1:+28606985 None:intergenic
TGGCAAACTGGGACGGTACC+AGG 0.462626 1_1:+28606753 None:intergenic
GTTGAAACCATTTCAAACTT+GGG 0.464963 1_1:-28611962 Msa0017240:CDS
CTGCAGCCTTACCTAACAAA+TGG 0.471070 1_1:+28610010 None:intergenic
GTTGAGTACTCTTTGTGAAA+GGG 0.474056 1_1:+28610267 None:intergenic
GCCAAACACTCCTCTTCCTA+AGG 0.478082 1_1:-28607466 Msa0017240:CDS
GATCATTTAAACAACATAGT+AGG 0.479023 1_1:-28610474 Msa0017240:CDS
TTAATTGTGATTGCATGAAT+CGG 0.479479 1_1:+28610688 None:intergenic
AAATGTTGCTTGGGACAAAA+GGG 0.480949 1_1:-28611072 Msa0017240:intron
TTGTGCAGCAGTACATGGTT+GGG 0.482195 1_1:-28609621 Msa0017240:CDS
AGGTAAGGCTGCAGAGGAAA+AGG 0.483645 1_1:-28610001 Msa0017240:CDS
AAAGAAGTGCATTCAGATAC+CGG 0.484288 1_1:-28609832 Msa0017240:CDS
TGCCAATGAAATGGCAAACT+GGG 0.484315 1_1:+28606742 None:intergenic
TACATTGTTGGACAAGGCAG+TGG 0.486615 1_1:-28609757 Msa0017240:CDS
CTTGTCTATCGCATGGAGAA+TGG 0.487636 1_1:-28610070 Msa0017240:CDS
GATGCCATGTGCACAAGAAA+AGG 0.487995 1_1:-28607897 Msa0017240:intron
ACATCAATGTTATTTGGTGT+TGG 0.488286 1_1:-28611839 Msa0017240:CDS
GTCTCATTGGTAGCCCCTGA+TGG 0.489107 1_1:-28606861 Msa0017240:CDS
CAAACACTGTGTATCATCCT+TGG 0.489206 1_1:-28607084 Msa0017240:CDS
CGGTTGTTGCTTGCACTTGG+TGG 0.492344 1_1:+28606892 None:intergenic
CATTTGTGGCTTCAAGGACA+TGG 0.496083 1_1:+28610583 None:intergenic
TGGCAATAAGGCTGCTGCAT+GGG 0.496663 1_1:-28606724 Msa0017240:CDS
TCACCTATAACACCAAGTTC+AGG 0.498689 1_1:+28609688 None:intergenic
TTCGAACATGACCTCTACCC+TGG 0.498740 1_1:-28607263 Msa0017240:CDS
ATGTACTATGTGTTCCTAAG+TGG 0.500042 1_1:-28611935 Msa0017240:CDS
AGAAAGACAGTACGACCATT+CGG 0.501174 1_1:-28607206 Msa0017240:CDS
TGTTTAACACTTTCTGTCAC+AGG 0.502841 1_1:-28611746 Msa0017240:CDS
CATACTACAAAATGTTGCTT+GGG 0.502921 1_1:-28611081 Msa0017240:CDS
ATCTTTGTGGACCGCGGACT+AGG 0.505055 1_1:-28610159 Msa0017240:CDS
GAGGATCCATTTGTTAGGTA+AGG 0.505955 1_1:-28610016 Msa0017240:CDS
GTCCTCATGGATTGTTGTAT+AGG 0.510432 1_1:+28610335 None:intergenic
TGTTGAGTACTCTTTGTGAA+AGG 0.510691 1_1:+28610266 None:intergenic
GCTCGAGATGGACTTTCCAT+TGG 0.511862 1_1:-28611137 Msa0017240:CDS
CAGACACCATCTTAAGATCA+AGG 0.511957 1_1:-28611898 Msa0017240:CDS
GCTTATTGTGCAGCAGTACA+TGG 0.513826 1_1:-28609626 Msa0017240:CDS
GTTAACTGATGCATATGGTT+GGG 0.514184 1_1:-28611642 Msa0017240:CDS
ATTATAACCCTCTTCATTGG+AGG 0.515995 1_1:-28610111 Msa0017240:CDS
ATCTTAAGATCAAGGAAGAA+AGG 0.517418 1_1:-28611890 Msa0017240:CDS
TCTATCGCATGGAGAATGGC+AGG 0.518833 1_1:-28610066 Msa0017240:CDS
TTTGGTATGCCTGCTCGAGA+TGG 0.519071 1_1:-28611149 Msa0017240:CDS
GTCATGGTGGCAAACTGTTA+AGG 0.520000 1_1:+28606824 None:intergenic
CAGAGGAAAAGGTATTGAAA+AGG 0.521115 1_1:-28609990 Msa0017240:CDS
TCTCCCCAATTATTAGCAGC+AGG 0.521533 1_1:+28611599 None:intergenic
TCAAAGAAAGCCTTAGGAAG+AGG 0.522668 1_1:+28607456 None:intergenic
GCAAGGATTCTAGCAAGGAC+GGG 0.522701 1_1:+28611719 None:intergenic
ATTGTGCAGCAGTACATGGT+TGG 0.522967 1_1:-28609622 Msa0017240:CDS
AAGTCTATTGGGATATTTCG+AGG 0.524149 1_1:-28612026 Msa0017240:CDS
ATGCGATAGACAAGGCTTCA+CGG 0.524726 1_1:+28610079 None:intergenic
TTGGTCCTGGTTTACGCCAA+AGG 0.528219 1_1:+28606998 None:intergenic
TTTCGTGTCTCCCAAAGTAC+TGG 0.529153 1_1:+28611248 None:intergenic
TTTGTATACAAAGCTTGGAA+AGG 0.529546 1_1:-28611684 Msa0017240:CDS
AAGCGGTTGTTGCTTGCACT+TGG 0.530159 1_1:+28606889 None:intergenic
GGATGGTCCTCAGAATGATT+GGG 0.530699 1_1:+28606699 None:intergenic
GAAAACATCTTTGTTTGTAG+GGG 0.531854 1_1:-28610953 Msa0017240:intron
GTTGTTTAAATGATCCATCT+GGG 0.533478 1_1:+28610482 None:intergenic
CTTAATGAGATTGATAAACC+TGG 0.533633 1_1:-28609790 Msa0017240:CDS
TCAATGATTGGAGTAAGGAT+AGG 0.534800 1_1:+28611512 None:intergenic
AGCAAGGATTCTAGCAAGGA+CGG 0.536018 1_1:+28611718 None:intergenic
TAGTTGCATGTTTGGCATTG+TGG 0.537685 1_1:+28610613 None:intergenic
ACAATGTACAAATCATATCC+AGG 0.539176 1_1:+28609772 None:intergenic
AAAATAAGCAAGTCTCCTCA+TGG 0.541391 1_1:-28609967 Msa0017240:CDS
TTGAAATGGTTTCAACAGCT+AGG 0.541802 1_1:+28611969 None:intergenic
TGGTGTGACCATCCTGAACT+TGG 0.544336 1_1:-28609700 Msa0017240:CDS
AATTCATCTCTAAACCACTT+AGG 0.545218 1_1:+28611921 None:intergenic
TGTTAACTGATGCATATGGT+TGG 0.546855 1_1:-28611643 Msa0017240:CDS
AAGTACCTTTGGCGTAAACC+AGG 0.548041 1_1:-28607003 Msa0017240:CDS
AAGGTGTCACGGATTCCATA+TGG 0.548559 1_1:-28607172 Msa0017240:CDS
TTATCTCACAATGTTCATTG+TGG 0.552103 1_1:+28610220 None:intergenic
ATGATCAACCATCGATTCCA+AGG 0.553892 1_1:+28607067 None:intergenic
CTACGTTGTAGATGTCCTCA+TGG 0.554261 1_1:+28610322 None:intergenic
CCAGGACCAATATGTGGTGG+AGG 0.558378 1_1:-28606985 Msa0017240:CDS
TATGACGGCCATGACGCCCT+TGG 0.561940 1_1:+28611100 None:intergenic
GAAGCTCTCAAAGTCGAACC+TGG 0.565181 1_1:-28606771 Msa0017240:CDS
AATACAAACTTTGTAGAAGT+AGG 0.567201 1_1:-28607932 Msa0017240:CDS
AGTCTATTGGGATATTTCGA+GGG 0.572188 1_1:-28612025 Msa0017240:CDS
CATTCATGCCTCTTGTGTCA+TGG 0.572510 1_1:+28606808 None:intergenic
TTGGCAATAAGGCTGCTGCA+TGG 0.572968 1_1:-28606725 Msa0017240:CDS
TCTCAACACCAAGGGCGTCA+TGG 0.576380 1_1:-28611108 Msa0017240:CDS
ATGGAAAGTCCATCTCGAGC+AGG 0.578294 1_1:+28611140 None:intergenic
ATTCCTGCTGCTAATAATTG+GGG 0.578888 1_1:-28611602 Msa0017240:CDS
TAGAAGTAGGTAGCTATGCA+TGG 0.579491 1_1:-28607919 Msa0017240:CDS
CCTTAGCTTTACCTCCATCA+GGG 0.579655 1_1:+28606847 None:intergenic
AACATTTGTGCAACAATGAG+AGG 0.579798 1_1:+28612983 None:intergenic
ATTCACTGCCTTGTGCCTGA+AGG 0.579920 1_1:+28609882 None:intergenic
GCAATTTGGAGACACAAAAG+AGG 0.580264 1_1:+28613061 None:intergenic
ACAAAAGCTTAAGCTTAGCA+AGG 0.582096 1_1:+28611702 None:intergenic
TGTCACGGATTCCATATGGC+TGG 0.583154 1_1:-28607168 Msa0017240:CDS
ACAAAGATCGCTACAGAACA+AGG 0.584055 1_1:+28610174 None:intergenic
CGTAAACCAGGACCAATATG+TGG 0.588296 1_1:-28606991 Msa0017240:CDS
CGGTGTGATGCAGAAAGAGT+TGG 0.588896 1_1:-28609923 Msa0017240:CDS
GCTATGTTAACTGATGCATA+TGG 0.589456 1_1:-28611647 Msa0017240:CDS
AAATGCTACCAGAATTTCAC+CGG 0.592533 1_1:-28610565 Msa0017240:CDS
ACAATGAGAGGCACATGAAG+AGG 0.592658 1_1:+28612995 None:intergenic
GTGAAGCCTTGTCTATCGCA+TGG 0.595198 1_1:-28610077 Msa0017240:CDS
CGTCAGGTCCTCCAATGAAG+AGG 0.596745 1_1:+28610103 None:intergenic
CAAGGATTCTAGCAAGGACG+GGG 0.597090 1_1:+28611720 None:intergenic
AGTACTCTTTGTGAAAGGGA+AGG 0.598001 1_1:+28610271 None:intergenic
TCTCATTGTTGCACAAATGT+TGG 0.598692 1_1:-28612981 Msa0017240:intron
CTTGTTGAACTCACTAGACA+TGG 0.602615 1_1:-28610522 Msa0017240:CDS
TAAGGACTGTGCAAAAGCTG+AGG 0.606304 1_1:-28610668 Msa0017240:CDS
GTGGCGCAAGTCACATATGT+TGG 0.606661 1_1:-28611468 Msa0017240:CDS
GCTTAGCAAGGATTCTAGCA+AGG 0.608142 1_1:+28611714 None:intergenic
GTCTATTGGGATATTTCGAG+GGG 0.608737 1_1:-28612024 Msa0017240:CDS
TTTGTTAGGTAAGGCTGCAG+AGG 0.609001 1_1:-28610007 Msa0017240:CDS
AAGTGTTGGAATCTCTTCGC+CGG 0.610933 1_1:+28609813 None:intergenic
AATGAAATGGCAAACTGGGA+CGG 0.611123 1_1:+28606746 None:intergenic
AAAGAGTACTCAACAGTAGG+AGG 0.614048 1_1:-28610258 Msa0017240:CDS
CCCTGATGGAGGTAAAGCTA+AGG 0.615413 1_1:-28606847 Msa0017240:CDS
GTTTGCCACCATGACACAAG+AGG 0.616792 1_1:-28606816 Msa0017240:CDS
TGTATCATCCTTGGAATCGA+TGG 0.617049 1_1:-28607075 Msa0017240:CDS
AAGGAAGAAAGGCACTAGCA+TGG 0.617320 1_1:-28611879 Msa0017240:CDS
CACAAAGAGTACTCAACAGT+AGG 0.622103 1_1:-28610261 Msa0017240:CDS
CATTCTCCATGCGATAGACA+AGG 0.622362 1_1:+28610071 None:intergenic
GCAAGCAACAACCGCTTACG+TGG 0.630047 1_1:-28606883 Msa0017240:CDS
GTCAGGTCCTCCAATGAAGA+GGG 0.635772 1_1:+28610104 None:intergenic
AAAACCACGACAAGGTGTCA+CGG 0.639666 1_1:-28607183 Msa0017240:CDS
GAATCCGTGACACCTTGTCG+TGG 0.640843 1_1:+28607179 None:intergenic
TATTGACATAGAGATGGCAA+TGG 0.641692 1_1:-28613158 None:intergenic
ATCTTCTGGAGACAGTGTTG+TGG 0.641750 1_1:+28607506 None:intergenic
ACCGAACAAATAAGAACATG+TGG 0.642278 1_1:-28611487 Msa0017240:CDS
GCATCTAGATGACACAAGGA+TGG 0.644371 1_1:+28606682 None:intergenic
TGAACTGCAGAGACATGTAC+CGG 0.647797 1_1:+28610546 None:intergenic
TCATTGGTAGCCCCTGATGG+AGG 0.649457 1_1:-28606858 Msa0017240:CDS
CTATCGCATGGAGAATGGCA+GGG 0.649504 1_1:-28610065 Msa0017240:CDS
TCATGCCTCTTGTGTCATGG+TGG 0.651851 1_1:+28606811 None:intergenic
GGTGTTGAGAAGCATACCAA+TGG 0.652834 1_1:+28611121 None:intergenic
ATGGGTTCCCAATCATTCTG+AGG 0.654889 1_1:-28606706 Msa0017240:CDS
TCCACGTGGATTGTAAAACA+AGG 0.656233 1_1:+28611994 None:intergenic
AAACCAGGACCAATATGTGG+TGG 0.656378 1_1:-28606988 Msa0017240:CDS
GAACACAGTTACATGTTGTG+AGG 0.656974 1_1:-28610035 Msa0017240:CDS
CATGTCTAGTGAGTTCAACA+AGG 0.657654 1_1:+28610523 None:intergenic
GTAGCGATCTTTGTGGACCG+CGG 0.658663 1_1:-28610165 Msa0017240:CDS
GAGGCACATGAAGAGGCTTG+AGG 0.659732 1_1:+28613002 None:intergenic
TACCAATGAGACCACGTAAG+CGG 0.661040 1_1:+28606872 None:intergenic
GTCATAACCATGAAAGAACA+TGG 0.661819 1_1:+28610777 None:intergenic
GGTATGCTTCTCAACACCAA+GGG 0.663548 1_1:-28611116 Msa0017240:CDS
GATTTGTACATTGTTGGACA+AGG 0.674476 1_1:-28609763 Msa0017240:CDS
TGGTATGCTTCTCAACACCA+AGG 0.678341 1_1:-28611117 Msa0017240:CDS
CTTAGCTTTACCTCCATCAG+GGG 0.685063 1_1:+28606848 None:intergenic
CCATTCGGAAAACCACGACA+AGG 0.685221 1_1:-28607191 Msa0017240:CDS
GTTAGCATCTAGATGACACA+AGG 0.692344 1_1:+28606678 None:intergenic
CATCTGGGAAACAAGAATAG+CGG 0.693011 1_1:+28610497 None:intergenic
CTATAACACCAAGTTCAGGA+TGG 0.698768 1_1:+28609692 None:intergenic
CAGCTTGTTGGAGACAACAA+TGG 0.704685 1_1:-28607971 Msa0017240:CDS
ATCCTATACAACAATCCATG+AGG 0.707433 1_1:-28610337 Msa0017240:CDS
ATGTTGTCGACTGTTATGGA+CGG 0.721856 1_1:-28609943 Msa0017240:CDS
ATATCAGCAAACTTTCCATG+AGG 0.724897 1_1:+28611353 None:intergenic
TTAACAACGATCCTAGTCCG+CGG 0.735000 1_1:+28610148 None:intergenic
TCAACAGCTAGGATTCCACG+TGG 0.744689 1_1:+28611980 None:intergenic
TCTATTGGGATATTTCGAGG+GGG 0.752028 1_1:-28612023 Msa0017240:CDS
ACAGTCGACAACATTCCATG+AGG 0.752530 1_1:+28609952 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTAAGAATTACATAAT+TGG + chr1_1:28610733-28610752 None:intergenic 10.0%
!!! ATTTGTATGATTTTTTTTTT+GGG + chr1_1:28611365-28611384 None:intergenic 10.0%
!!! TATTTGTATGATTTTTTTTT+TGG + chr1_1:28611366-28611385 None:intergenic 10.0%
!!! TTTTTTAGATACAATGTTTT+GGG + chr1_1:28607290-28607309 None:intergenic 15.0%
!!! ATTTTTTAGATACAATGTTT+TGG + chr1_1:28607291-28607310 None:intergenic 15.0%
!!! ATATTAAAGCTTATCTATTT+TGG - chr1_1:28608062-28608081 Msa0017240:intron 15.0%
!! AAAAATACATTCTATCTTAA+AGG + chr1_1:28610589-28610608 None:intergenic 15.0%
!!! TATTTTTTTTTTTTTTTGGG+AGG - chr1_1:28610602-28610621 Msa0017240:CDS 15.0%
!!! TAAATTCTTGTAGTTTTTTT+TGG + chr1_1:28611471-28611490 None:intergenic 15.0%
!! TAAATATCATAAAACTATGT+TGG - chr1_1:28611723-28611742 Msa0017240:CDS 15.0%
!! AAATATCATAAAACTATGTT+GGG - chr1_1:28611724-28611743 Msa0017240:CDS 15.0%
!!! ATGTTAATAATTTTTACAGT+TGG - chr1_1:28612284-28612303 Msa0017240:intron 15.0%
!! AAAATGTTATACACTAAAGT+TGG - chr1_1:28607205-28607224 Msa0017240:CDS 20.0%
!! TAATAGTTTCCATTGAAAAT+TGG - chr1_1:28607582-28607601 Msa0017240:intron 20.0%
!! GTTTATTTGTTCGTATATTA+CGG - chr1_1:28608402-28608421 Msa0017240:intron 20.0%
!! TTGTATATGGCATTTATTAA+CGG + chr1_1:28609114-28609133 None:intergenic 20.0%
!! TATTACTAGATTAGATATCA+CGG - chr1_1:28610330-28610349 Msa0017240:CDS 20.0%
!!! TGTCTTTTATCTAGAAATTT+AGG - chr1_1:28610428-28610447 Msa0017240:CDS 20.0%
!! TAAATTCTTGATATTTGCTT+TGG + chr1_1:28610794-28610813 None:intergenic 20.0%
!! CTATAAATAAGTGACTTTAA+AGG + chr1_1:28610827-28610846 None:intergenic 20.0%
!!! TTTTTTTTAGAGAATATGGA+CGG + chr1_1:28610864-28610883 None:intergenic 20.0%
!!! AGACTTTTTTTTAGAGAATA+TGG + chr1_1:28610868-28610887 None:intergenic 20.0%
!!! GTCTGTAAAATTTTTGAATT+TGG - chr1_1:28610884-28610903 Msa0017240:intron 20.0%
!!! TTTTTTATCAAGTAGTACTA+TGG + chr1_1:28611191-28611210 None:intergenic 20.0%
!! AACTATTAAAAAAACTGAGT+TGG + chr1_1:28611322-28611341 None:intergenic 20.0%
!!! ATTTATCCTTGAACATTTTT+TGG + chr1_1:28611555-28611574 None:intergenic 20.0%
!! ATTATATTTAGTGCAAAACA+AGG - chr1_1:28611684-28611703 Msa0017240:CDS 20.0%
!! TGTATTTACTCTCTATATAA+TGG - chr1_1:28612069-28612088 Msa0017240:intron 20.0%
!! GTATTTACTCTCTATATAAT+GGG - chr1_1:28612070-28612089 Msa0017240:intron 20.0%
!!! TTTAGGAACTAATTGTTTTT+TGG - chr1_1:28612468-28612487 Msa0017240:intron 20.0%
!!! TTGTTTTTTGGTTTTTAATG+TGG - chr1_1:28612480-28612499 Msa0017240:intron 20.0%
! CCAAAAGATTATAAGCAATT+TGG + chr1_1:28606787-28606806 None:intergenic 25.0%
!! CCAAATTGCTTATAATCTTT+TGG - chr1_1:28606784-28606803 Msa0017240:CDS 25.0%
!!! AAAGAGATTTTAACAACTTC+AGG + chr1_1:28607070-28607089 None:intergenic 25.0%
! GAAGTTGTTAAAATCTCTTT+AGG - chr1_1:28607070-28607089 Msa0017240:CDS 25.0%
!! TTCTAATTTTCTCTTCGAAA+AGG + chr1_1:28607104-28607123 None:intergenic 25.0%
! TAATAAATAAGGGTGACATT+CGG + chr1_1:28607498-28607517 None:intergenic 25.0%
! GCAAGCACTTTAATAAATAA+GGG + chr1_1:28607508-28607527 None:intergenic 25.0%
! TGCAAGCACTTTAATAAATA+AGG + chr1_1:28607509-28607528 None:intergenic 25.0%
!! TTACTTAAGCCAATTTTCAA+TGG + chr1_1:28607594-28607613 None:intergenic 25.0%
! ATTGTGACATCAATGTTATT+TGG - chr1_1:28607986-28608005 Msa0017240:intron 25.0%
! ACAAAAAGCTATGAACAAAA+AGG + chr1_1:28608284-28608303 None:intergenic 25.0%
! AGGTTTAATGATGCTTATTA+TGG - chr1_1:28608609-28608628 Msa0017240:intron 25.0%
! TGCAAAATAGAAATTAAAGC+TGG + chr1_1:28608798-28608817 None:intergenic 25.0%
!! AGAAAACATCTTTGTTTGTA+GGG - chr1_1:28608877-28608896 Msa0017240:intron 25.0%
! CGAACATAGTTAAAATTCAA+AGG + chr1_1:28609006-28609025 None:intergenic 25.0%
!!! TTTTTTTCCTTTGCAGTTTT+TGG - chr1_1:28609029-28609048 Msa0017240:intron 25.0%
! TTAATTGTGATTGCATGAAT+CGG + chr1_1:28609146-28609165 None:intergenic 25.0%
! GATCATTTAAACAACATAGT+AGG - chr1_1:28609357-28609376 Msa0017240:intron 25.0%
!!! AAGAGTATATATTTTCCTTC+AGG - chr1_1:28609934-28609953 Msa0017240:CDS 25.0%
!!! ATATTAGCTTCAACTAGTTT+TGG - chr1_1:28610167-28610186 Msa0017240:CDS 25.0%
! GATCAATAATAGTAACTGTT+AGG - chr1_1:28610299-28610318 Msa0017240:CDS 25.0%
! TCAAGATATAATATGATCCT+TGG - chr1_1:28610484-28610503 Msa0017240:CDS 25.0%
!!! TTTTTTTTTTTTTTGGGAGG+CGG - chr1_1:28610605-28610624 Msa0017240:CDS 25.0%
! TGTCAAAACAATCATTTAAG+TGG - chr1_1:28610699-28610718 Msa0017240:CDS 25.0%
! AATATAGATCAAATGCTTGA+AGG - chr1_1:28611256-28611275 Msa0017240:CDS 25.0%
!! TGCTTGAAGGAAAATATTTT+TGG - chr1_1:28611269-28611288 Msa0017240:CDS 25.0%
! ACAAAACCAAAAAATGTTCA+AGG - chr1_1:28611546-28611565 Msa0017240:CDS 25.0%
! AATACAAACTTTGTAGAAGT+AGG - chr1_1:28611899-28611918 Msa0017240:CDS 25.0%
!! AAGATTATTGGCAAAGTATT+TGG - chr1_1:28612343-28612362 Msa0017240:intron 25.0%
! TACAATTCATATTACTCACA+AGG + chr1_1:28612411-28612430 None:intergenic 25.0%
TTAGTGCTTCAAACAATATC+TGG - chr1_1:28606717-28606736 Msa0017240:CDS 30.0%
! AGACTTTAGTTTCTTAAGAG+TGG - chr1_1:28607031-28607050 Msa0017240:CDS 30.0%
! GACTTTAGTTTCTTAAGAGT+GGG - chr1_1:28607032-28607051 Msa0017240:CDS 30.0%
! AGATCCATTAACTAAGGTTT+TGG - chr1_1:28607154-28607173 Msa0017240:CDS 30.0%
! TGTGAAACTGTTTGCAATTT+TGG - chr1_1:28607356-28607375 Msa0017240:intron 30.0%
! TTAAAGTGCTTGCAAGTATA+TGG - chr1_1:28607515-28607534 Msa0017240:CDS 30.0%
! TCTGAACTTTTCTATTATGC+AGG - chr1_1:28607763-28607782 Msa0017240:intron 30.0%
TGTTGAAACCATTTCAAACT+TGG - chr1_1:28607868-28607887 Msa0017240:intron 30.0%
GTTGAAACCATTTCAAACTT+GGG - chr1_1:28607869-28607888 Msa0017240:intron 30.0%
CATAATTCCCAAGTTTGAAA+TGG + chr1_1:28607879-28607898 None:intergenic 30.0%
AATTCATCTCTAAACCACTT+AGG + chr1_1:28607913-28607932 None:intergenic 30.0%
TTTCTTCCTTGATCTTAAGA+TGG + chr1_1:28607942-28607961 None:intergenic 30.0%
ATCTTAAGATCAAGGAAGAA+AGG - chr1_1:28607941-28607960 Msa0017240:CDS 30.0%
!! ACATCAATGTTATTTGGTGT+TGG - chr1_1:28607992-28608011 Msa0017240:intron 30.0%
! AAGCTTTTGTATACAAAGCT+TGG - chr1_1:28608142-28608161 Msa0017240:intron 30.0%
TTTGTATACAAAGCTTGGAA+AGG - chr1_1:28608147-28608166 Msa0017240:intron 30.0%
!!! CATAGCTTTTTGTTTTACTG+TGG - chr1_1:28608291-28608310 Msa0017240:intron 30.0%
! TTTGTTCGGTTTTCAATGAT+TGG + chr1_1:28608334-28608353 None:intergenic 30.0%
! TCGTATATTACGGATTTTCT+TGG - chr1_1:28608412-28608431 Msa0017240:intron 30.0%
!! AAAGTTTGCTGATATGGTTA+TGG - chr1_1:28608486-28608505 Msa0017240:intron 30.0%
! ATCAAAGAGCTCAAAACTTT+TGG + chr1_1:28608649-28608668 None:intergenic 30.0%
!!! TTGATCGTCACTTTCTTTTT+TGG - chr1_1:28608664-28608683 Msa0017240:intron 30.0%
! AGCAACATTTTGTAGTATGA+CGG + chr1_1:28608749-28608768 None:intergenic 30.0%
TCATACTACAAAATGTTGCT+TGG - chr1_1:28608749-28608768 Msa0017240:intron 30.0%
! CATACTACAAAATGTTGCTT+GGG - chr1_1:28608750-28608769 Msa0017240:intron 30.0%
! ACAAAGATGTTTTCTCTTTC+AGG + chr1_1:28608872-28608891 None:intergenic 30.0%
! GAGAAAACATCTTTGTTTGT+AGG - chr1_1:28608876-28608895 Msa0017240:intron 30.0%
! GAAAACATCTTTGTTTGTAG+GGG - chr1_1:28608878-28608897 Msa0017240:intron 30.0%
!!! TCGGAATTTTGGTTTGTATA+TGG + chr1_1:28609127-28609146 None:intergenic 30.0%
GATTCATGCAATCACAATTA+AGG - chr1_1:28609145-28609164 Msa0017240:intron 30.0%
GTTGTTTAAATGATCCATCT+GGG + chr1_1:28609352-28609371 None:intergenic 30.0%
! TGTTGTTTAAATGATCCATC+TGG + chr1_1:28609353-28609372 None:intergenic 30.0%
TTATCTCACAATGTTCATTG+TGG + chr1_1:28609614-28609633 None:intergenic 30.0%
! TCAATCTCATTAAGAAGTGT+TGG + chr1_1:28610035-28610054 None:intergenic 30.0%
CTTAATGAGATTGATAAACC+TGG - chr1_1:28610041-28610060 Msa0017240:CDS 30.0%
ACAATGTACAAATCATATCC+AGG + chr1_1:28610062-28610081 None:intergenic 30.0%
! GGATATGATTTGTACATTGT+TGG - chr1_1:28610062-28610081 Msa0017240:CDS 30.0%
ATCTATCATTTACACTACCT+CGG + chr1_1:28610282-28610301 None:intergenic 30.0%
CTAGATAAAAGACAACAAGA+TGG + chr1_1:28610422-28610441 None:intergenic 30.0%
TATAATATGATCCTTGGAGT+CGG - chr1_1:28610490-28610509 Msa0017240:CDS 30.0%
TGAACATAGCTCAATTGTTA+GGG - chr1_1:28611072-28611091 Msa0017240:intron 30.0%
ACACAAACCTTATATTACAG+AGG - chr1_1:28611394-28611413 Msa0017240:CDS 30.0%
GATTGAACCTCTGTAATATA+AGG + chr1_1:28611404-28611423 None:intergenic 30.0%
!! ATAGGTATTGAAACAAAACC+AGG - chr1_1:28611444-28611463 Msa0017240:CDS 30.0%
AACTACAAGAATTTACCACT+TGG - chr1_1:28611476-28611495 Msa0017240:CDS 30.0%
! TAAGAGTTGAGCTTTAGTTA+GGG + chr1_1:28611621-28611640 None:intergenic 30.0%
! TTAAGAGTTGAGCTTTAGTT+AGG + chr1_1:28611622-28611641 None:intergenic 30.0%
AAACTATGTTGGGAAAGTAA+AGG - chr1_1:28611734-28611753 Msa0017240:CDS 30.0%
TCTAGGAGAATCATTATGAA+TGG - chr1_1:28611786-28611805 Msa0017240:CDS 30.0%
ATTATCATCTCCAAACTTTG+AGG + chr1_1:28611988-28612007 None:intergenic 30.0%
!!! ATTTTTACAGTTGGCTTTTG+TGG - chr1_1:28612293-28612312 Msa0017240:intron 30.0%
!!! TTTTTACAGTTGGCTTTTGT+GGG - chr1_1:28612294-28612313 Msa0017240:intron 30.0%
ATACTTTGCCAATAATCTTC+TGG + chr1_1:28612342-28612361 None:intergenic 30.0%
!! CATGACACAGTCTTATTATT+AGG + chr1_1:28612447-28612466 None:intergenic 30.0%
ATAAGACTGTGTCATGATTT+AGG - chr1_1:28612451-28612470 Msa0017240:intron 30.0%
!! TTCAATTCTTCGGTTTTGAT+AGG + chr1_1:28612529-28612548 None:intergenic 30.0%
! CTAAGATCATTTTCTTTCCA+GGG + chr1_1:28612588-28612607 None:intergenic 30.0%
!! GATCATGTCATTTCACATTT+TGG - chr1_1:28612781-28612800 Msa0017240:intron 30.0%
!!! TTTTGGAACGTCAAAGATTA+AGG - chr1_1:28612798-28612817 Msa0017240:intron 30.0%
AACATTTGTGCAACAATGAG+AGG + chr1_1:28606851-28606870 None:intergenic 35.0%
TCTCATTGTTGCACAAATGT+TGG - chr1_1:28606850-28606869 Msa0017240:CDS 35.0%
AATGTGTTGTCAATTCGAGT+TGG - chr1_1:28606982-28607001 Msa0017240:CDS 35.0%
GCAATCAGATCCATTAACTA+AGG - chr1_1:28607148-28607167 Msa0017240:CDS 35.0%
GCTACCAAAACCTTAGTTAA+TGG + chr1_1:28607161-28607180 None:intergenic 35.0%
ATACACTAAAGTTGGCATCT+AGG - chr1_1:28607213-28607232 Msa0017240:CDS 35.0%
TCTCTGACGTAGATTAATGA+TGG - chr1_1:28607237-28607256 Msa0017240:CDS 35.0%
CTCTGACGTAGATTAATGAT+GGG - chr1_1:28607238-28607257 Msa0017240:CDS 35.0%
!! TAATGATGGGCGAAGTTAAT+TGG - chr1_1:28607251-28607270 Msa0017240:CDS 35.0%
ACAAGGAGTAATTAGTCACA+CGG - chr1_1:28607665-28607684 Msa0017240:intron 35.0%
GATTGCATTGCAAAAATGAG+AGG - chr1_1:28607726-28607745 Msa0017240:intron 35.0%
! AACTTTTCTATTATGCAGGC+TGG - chr1_1:28607767-28607786 Msa0017240:intron 35.0%
TTCTGTTAGTCGAAGTCTAT+TGG - chr1_1:28607793-28607812 Msa0017240:intron 35.0%
TCTGTTAGTCGAAGTCTATT+GGG - chr1_1:28607794-28607813 Msa0017240:intron 35.0%
AAGTCTATTGGGATATTTCG+AGG - chr1_1:28607805-28607824 Msa0017240:intron 35.0%
AGTCTATTGGGATATTTCGA+GGG - chr1_1:28607806-28607825 Msa0017240:intron 35.0%
TTGAAATGGTTTCAACAGCT+AGG + chr1_1:28607865-28607884 None:intergenic 35.0%
ATGTACTATGTGTTCCTAAG+TGG - chr1_1:28607896-28607915 Msa0017240:intron 35.0%
TGTTTAACACTTTCTGTCAC+AGG - chr1_1:28608085-28608104 Msa0017240:intron 35.0%
ACAAAAGCTTAAGCTTAGCA+AGG + chr1_1:28608132-28608151 None:intergenic 35.0%
GCTATGTTAACTGATGCATA+TGG - chr1_1:28608184-28608203 Msa0017240:intron 35.0%
TGTTAACTGATGCATATGGT+TGG - chr1_1:28608188-28608207 Msa0017240:intron 35.0%
GTTAACTGATGCATATGGTT+GGG - chr1_1:28608189-28608208 Msa0017240:intron 35.0%
TGATTCCTGCTGCTAATAAT+TGG - chr1_1:28608227-28608246 Msa0017240:intron 35.0%
GATTCCTGCTGCTAATAATT+GGG - chr1_1:28608228-28608247 Msa0017240:intron 35.0%
ATTCCTGCTGCTAATAATTG+GGG - chr1_1:28608229-28608248 Msa0017240:intron 35.0%
TCAATGATTGGAGTAAGGAT+AGG + chr1_1:28608322-28608341 None:intergenic 35.0%
! GGTTTTCAATGATTGGAGTA+AGG + chr1_1:28608327-28608346 None:intergenic 35.0%
ACCGAACAAATAAGAACATG+TGG - chr1_1:28608344-28608363 Msa0017240:intron 35.0%
! GCCACATGTTCTTATTTGTT+CGG + chr1_1:28608348-28608367 None:intergenic 35.0%
CATATGTTGGACGTATTTAC+AGG - chr1_1:28608376-28608395 Msa0017240:intron 35.0%
ATATCAGCAAACTTTCCATG+AGG + chr1_1:28608481-28608500 None:intergenic 35.0%
!! TCATGGAAAGTTTGCTGATA+TGG - chr1_1:28608480-28608499 Msa0017240:intron 35.0%
ATGTCAGATGACTTTGTTAC+TGG - chr1_1:28608511-28608530 Msa0017240:intron 35.0%
! AAAATGTTGCTTGGGACAAA+AGG - chr1_1:28608758-28608777 Msa0017240:intron 35.0%
! AAATGTTGCTTGGGACAAAA+GGG - chr1_1:28608759-28608778 Msa0017240:intron 35.0%
TTTGGATCCATGTTCTTTCA+TGG - chr1_1:28609047-28609066 Msa0017240:intron 35.0%
GTCATAACCATGAAAGAACA+TGG + chr1_1:28609057-28609076 None:intergenic 35.0%
! GATTGCATGAATCGGAATTT+TGG + chr1_1:28609138-28609157 None:intergenic 35.0%
GATCATGTTAGTTGCATGTT+TGG + chr1_1:28609229-28609248 None:intergenic 35.0%
TGAAATTCTGGTAGCATTTG+TGG + chr1_1:28609265-28609284 None:intergenic 35.0%
AAATGCTACCAGAATTTCAC+CGG - chr1_1:28609266-28609285 Msa0017240:intron 35.0%
ATCCTATACAACAATCCATG+AGG - chr1_1:28609494-28609513 Msa0017240:intron 35.0%
GTTGAGTACTCTTTGTGAAA+GGG + chr1_1:28609567-28609586 None:intergenic 35.0%
TGTTGAGTACTCTTTGTGAA+AGG + chr1_1:28609568-28609587 None:intergenic 35.0%
TGTTCATTGTGGCTTATTTC+TGG + chr1_1:28609603-28609622 None:intergenic 35.0%
ATTATAACCCTCTTCATTGG+AGG - chr1_1:28609720-28609739 Msa0017240:CDS 35.0%
!! CAGAGGAAAAGGTATTGAAA+AGG - chr1_1:28609841-28609860 Msa0017240:CDS 35.0%
AAAATAAGCAAGTCTCCTCA+TGG - chr1_1:28609864-28609883 Msa0017240:CDS 35.0%
! TATATTTTCCTTCAGGCACA+AGG - chr1_1:28609941-28609960 Msa0017240:CDS 35.0%
! AAAGAAGTGCATTCAGATAC+CGG - chr1_1:28609999-28610018 Msa0017240:CDS 35.0%
GATTTGTACATTGTTGGACA+AGG - chr1_1:28610068-28610087 Msa0017240:CDS 35.0%
TGAAATGAAAAATAGTCCCG+AGG - chr1_1:28610262-28610281 Msa0017240:CDS 35.0%
TCTATCATTTACACTACCTC+GGG + chr1_1:28610281-28610300 None:intergenic 35.0%
TATATCTTGATCGTTCGACT+CGG + chr1_1:28610474-28610493 None:intergenic 35.0%
TTCTTGATATTTGCTTTGGC+AGG + chr1_1:28610790-28610809 None:intergenic 35.0%
! GTCGTGACGGAAAATATTTA+GGG + chr1_1:28610945-28610964 None:intergenic 35.0%
! AGTCGTGACGGAAAATATTT+AGG + chr1_1:28610946-28610965 None:intergenic 35.0%
! ATATTTTCCGTCACGACTTT+TGG - chr1_1:28610948-28610967 Msa0017240:intron 35.0%
ACAATTGAGCTATGTTCACA+AGG + chr1_1:28611070-28611089 None:intergenic 35.0%
GTGAACATAGCTCAATTGTT+AGG - chr1_1:28611071-28611090 Msa0017240:intron 35.0%
GGACATTGCAAATATATGCA+GGG - chr1_1:28611093-28611112 Msa0017240:CDS 35.0%
GACATTGCAAATATATGCAG+GGG - chr1_1:28611094-28611113 Msa0017240:CDS 35.0%
TGGAGAGATGTAAATTAGAG+GGG + chr1_1:28611142-28611161 None:intergenic 35.0%
GTGGAGAGATGTAAATTAGA+GGG + chr1_1:28611143-28611162 None:intergenic 35.0%
AGTGGAGAGATGTAAATTAG+AGG + chr1_1:28611144-28611163 None:intergenic 35.0%
TTCACCTTAAGGTGAATAAG+TGG + chr1_1:28611162-28611181 None:intergenic 35.0%
TATGGCTAGAATTCACCTTA+AGG + chr1_1:28611173-28611192 None:intergenic 35.0%
!!! CTTGTAGTTTTTTTTGGTCC+TGG + chr1_1:28611465-28611484 None:intergenic 35.0%
! TTCAGTTTTTAACGTCCAAG+TGG + chr1_1:28611494-28611513 None:intergenic 35.0%
ACTTGGACGTTAAAAACTGA+AGG - chr1_1:28611493-28611512 Msa0017240:CDS 35.0%
TCATAATGATTCTCCTAGAG+TGG + chr1_1:28611785-28611804 None:intergenic 35.0%
AGCTGCACATATTGTACAAA+TGG + chr1_1:28611845-28611864 None:intergenic 35.0%
! TTTACCTTTTCTTGTGCACA+TGG + chr1_1:28611941-28611960 None:intergenic 35.0%
TTGGAAACAACCTCAAAGTT+TGG - chr1_1:28611975-28611994 Msa0017240:CDS 35.0%
!! ATAAGTGTGGAAGCTTTGTT+AGG + chr1_1:28612120-28612139 None:intergenic 35.0%
CTATGAGAAAGTGATAAGTG+TGG + chr1_1:28612133-28612152 None:intergenic 35.0%
AATAGGTCAAAGAAAGCCTT+AGG + chr1_1:28612384-28612403 None:intergenic 35.0%
ATTACTCACAAGGTAGCAAT+AGG + chr1_1:28612401-28612420 None:intergenic 35.0%
!! GACACAGTCTTATTATTAGG+AGG + chr1_1:28612444-28612463 None:intergenic 35.0%
!! TTGGTTTTTAATGTGGCAGA+TGG - chr1_1:28612487-28612506 Msa0017240:intron 35.0%
!! CGAGTATTGGTTCAATTCTT+CGG + chr1_1:28612539-28612558 None:intergenic 35.0%
!! CGAAAAAAAGTGTCGAGTAT+TGG + chr1_1:28612552-28612571 None:intergenic 35.0%
! CCTAAGATCATTTTCTTTCC+AGG + chr1_1:28612589-28612608 None:intergenic 35.0%
CCTGGAAAGAAAATGATCTT+AGG - chr1_1:28612586-28612605 Msa0017240:intron 35.0%
TGGAGGAAGTGAAAAAAGTT+GGG - chr1_1:28612863-28612882 Msa0017240:intron 35.0%
! TTGCCATTTCATTGGCAATA+AGG - chr1_1:28613095-28613114 Msa0017240:CDS 35.0%
GCAATTTGGAGACACAAAAG+AGG + chr1_1:28606773-28606792 None:intergenic 40.0%
! TGGTAGCGAGTCTTATAGAT+AGG - chr1_1:28607174-28607193 Msa0017240:CDS 40.0%
TCTAAAAAATGTCCTCCTCG+AGG - chr1_1:28607301-28607320 Msa0017240:CDS 40.0%
GGAGATTTCTTGGCATATTC+AGG - chr1_1:28607322-28607341 Msa0017240:CDS 40.0%
GGCATATTCAGGAACTACAA+CGG - chr1_1:28607333-28607352 Msa0017240:intron 40.0%
TGGCGTGTATAATAATCCCA+TGG - chr1_1:28607376-28607395 Msa0017240:intron 40.0%
GGCGTGTATAATAATCCCAT+GGG - chr1_1:28607377-28607396 Msa0017240:intron 40.0%
ACATTACCAATGACATGCAG+GGG + chr1_1:28607420-28607439 None:intergenic 40.0%
GACATTACCAATGACATGCA+GGG + chr1_1:28607421-28607440 None:intergenic 40.0%
TGACATTACCAATGACATGC+AGG + chr1_1:28607422-28607441 None:intergenic 40.0%
GACACATAACATGAGACACA+AGG - chr1_1:28607648-28607667 Msa0017240:intron 40.0%
GTCTATTGGGATATTTCGAG+GGG - chr1_1:28607807-28607826 Msa0017240:intron 40.0%
TCTATTGGGATATTTCGAGG+GGG - chr1_1:28607808-28607827 Msa0017240:intron 40.0%
!!! ACCTTGTTTTACAATCCACG+TGG - chr1_1:28607836-28607855 Msa0017240:intron 40.0%
! TCCACGTGGATTGTAAAACA+AGG + chr1_1:28607840-28607859 None:intergenic 40.0%
CAGACACCATCTTAAGATCA+AGG - chr1_1:28607933-28607952 Msa0017240:CDS 40.0%
AACACAAAAGCTCCGACAAT+AGG + chr1_1:28608445-28608464 None:intergenic 40.0%
! ATTGTCGGAGCTTTTGTGTT+CGG - chr1_1:28608445-28608464 Msa0017240:intron 40.0%
!! TTCGGATTGATTTTGCCTCA+TGG - chr1_1:28608463-28608482 Msa0017240:intron 40.0%
CCAAATCCAGCAAAGTAAAC+AGG + chr1_1:28608547-28608566 None:intergenic 40.0%
CCTGTTTACTTTGCTGGATT+TGG - chr1_1:28608544-28608563 Msa0017240:intron 40.0%
ATGCATCACTAGAGAGACAA+GGG + chr1_1:28608966-28608985 None:intergenic 40.0%
TATGCATCACTAGAGAGACA+AGG + chr1_1:28608967-28608986 None:intergenic 40.0%
CATGGATCCAAAAACTGCAA+AGG + chr1_1:28609039-28609058 None:intergenic 40.0%
GCAAAAGCTGAGGTTTGATA+TGG - chr1_1:28609173-28609192 Msa0017240:intron 40.0%
TAGTTGCATGTTTGGCATTG+TGG + chr1_1:28609221-28609240 None:intergenic 40.0%
CATGTCTAGTGAGTTCAACA+AGG + chr1_1:28609311-28609330 None:intergenic 40.0%
CTTGTTGAACTCACTAGACA+TGG - chr1_1:28609309-28609328 Msa0017240:intron 40.0%
CATCTGGGAAACAAGAATAG+CGG + chr1_1:28609337-28609356 None:intergenic 40.0%
! GTCCTCATGGATTGTTGTAT+AGG + chr1_1:28609499-28609518 None:intergenic 40.0%
AGTACTCTTTGTGAAAGGGA+AGG + chr1_1:28609563-28609582 None:intergenic 40.0%
!! CACAAAGAGTACTCAACAGT+AGG - chr1_1:28609570-28609589 Msa0017240:CDS 40.0%
!! AAAGAGTACTCAACAGTAGG+AGG - chr1_1:28609573-28609592 Msa0017240:CDS 40.0%
ACAAAGATCGCTACAGAACA+AGG + chr1_1:28609660-28609679 None:intergenic 40.0%
TTGTTCTGTAGCGATCTTTG+TGG - chr1_1:28609659-28609678 Msa0017240:CDS 40.0%
CGCATTATAACCCTCTTCAT+TGG - chr1_1:28609717-28609736 Msa0017240:CDS 40.0%
GAACACAGTTACATGTTGTG+AGG - chr1_1:28609796-28609815 Msa0017240:CDS 40.0%
GTTGTGAGGATCCATTTGTT+AGG - chr1_1:28609810-28609829 Msa0017240:CDS 40.0%
! GAGGATCCATTTGTTAGGTA+AGG - chr1_1:28609815-28609834 Msa0017240:CDS 40.0%
! TGGAATGTTGTCGACTGTTA+TGG - chr1_1:28609884-28609903 Msa0017240:CDS 40.0%
! ATGTTGTCGACTGTTATGGA+CGG - chr1_1:28609888-28609907 Msa0017240:CDS 40.0%
CTATAACACCAAGTTCAGGA+TGG + chr1_1:28610142-28610161 None:intergenic 40.0%
!! CATCCTGAACTTGGTGTTAT+AGG - chr1_1:28610140-28610159 Msa0017240:CDS 40.0%
TCACCTATAACACCAAGTTC+AGG + chr1_1:28610146-28610165 None:intergenic 40.0%
TTGGCAGGTAGTTCACAATA+TGG + chr1_1:28610775-28610794 None:intergenic 40.0%
GGGACATTGCAAATATATGC+AGG - chr1_1:28611092-28611111 Msa0017240:CDS 40.0%
CAAATATATGCAGGGGTTAG+AGG - chr1_1:28611101-28611120 Msa0017240:CDS 40.0%
CTCTCCACTTATTCACCTTA+AGG - chr1_1:28611155-28611174 Msa0017240:CDS 40.0%
TTTATTGATCCCTCCACTCT+AGG - chr1_1:28611769-28611788 Msa0017240:CDS 40.0%
AATGATTCTCCTAGAGTGGA+GGG + chr1_1:28611781-28611800 None:intergenic 40.0%
TAATGATTCTCCTAGAGTGG+AGG + chr1_1:28611782-28611801 None:intergenic 40.0%
CAGTTAATCTCCAAAGCTTG+TGG + chr1_1:28611814-28611833 None:intergenic 40.0%
GTACAATATGTGCAGCTTGT+TGG - chr1_1:28611848-28611867 Msa0017240:CDS 40.0%
TAGAAGTAGGTAGCTATGCA+TGG - chr1_1:28611912-28611931 Msa0017240:CDS 40.0%
!! CTTTGAGGTTGTTTCCAAGA+GGG + chr1_1:28611973-28611992 None:intergenic 40.0%
!! ACTTTGAGGTTGTTTCCAAG+AGG + chr1_1:28611974-28611993 None:intergenic 40.0%
GATAATGTAGTTGTGCTGCA+TGG - chr1_1:28612002-28612021 Msa0017240:CDS 40.0%
! GCTTTGTTAGGTGTGTATGA+GGG + chr1_1:28612108-28612127 None:intergenic 40.0%
!! AGCTTTGTTAGGTGTGTATG+AGG + chr1_1:28612109-28612128 None:intergenic 40.0%
CACTGTCTCCAGAAGATTAT+TGG - chr1_1:28612331-28612350 Msa0017240:intron 40.0%
TCAAAGAAAGCCTTAGGAAG+AGG + chr1_1:28612378-28612397 None:intergenic 40.0%
! TCATTTTCTTTCCAGGGTAG+AGG + chr1_1:28612582-28612601 None:intergenic 40.0%
AGAAAGACAGTACGACCATT+CGG - chr1_1:28612625-28612644 Msa0017240:intron 40.0%
TGTAATAGTCCAATCGCTAC+AGG - chr1_1:28612718-28612737 Msa0017240:intron 40.0%
CAAACACTGTGTATCATCCT+TGG - chr1_1:28612747-28612766 Msa0017240:intron 40.0%
TGTATCATCCTTGGAATCGA+TGG - chr1_1:28612756-28612775 Msa0017240:intron 40.0%
!! ATGATCAACCATCGATTCCA+AGG + chr1_1:28612767-28612786 None:intergenic 40.0%
! AAGGCGATTTCAAGTACCTT+TGG - chr1_1:28612817-28612836 Msa0017240:intron 40.0%
GTGGAGGAAGTGAAAAAAGT+TGG - chr1_1:28612862-28612881 Msa0017240:intron 40.0%
GGAGGAAGTGAAAAAAGTTG+GGG - chr1_1:28612864-28612883 Msa0017240:intron 40.0%
AATGAAATGGCAAACTGGGA+CGG + chr1_1:28613088-28613107 None:intergenic 40.0%
TGCCAATGAAATGGCAAACT+GGG + chr1_1:28613092-28613111 None:intergenic 40.0%
TTGCCAATGAAATGGCAAAC+TGG + chr1_1:28613093-28613112 None:intergenic 40.0%
!! CAGCCTTATTGCCAATGAAA+TGG + chr1_1:28613101-28613120 None:intergenic 40.0%
! ACAATGAGAGGCACATGAAG+AGG + chr1_1:28606839-28606858 None:intergenic 45.0%
TATGCCAAGAAATCTCCTCG+AGG + chr1_1:28607319-28607338 None:intergenic 45.0%
GAAACTAGCAAGCATCCCAT+GGG + chr1_1:28607395-28607414 None:intergenic 45.0%
TGAAACTAGCAAGCATCCCA+TGG + chr1_1:28607396-28607415 None:intergenic 45.0%
TTTCAACCCCTGCATGTCAT+TGG - chr1_1:28607411-28607430 Msa0017240:intron 45.0%
!! AAGGAAGAAAGGCACTAGCA+TGG - chr1_1:28607952-28607971 Msa0017240:CDS 45.0%
AGCAAGGATTCTAGCAAGGA+CGG + chr1_1:28608116-28608135 None:intergenic 45.0%
GCTTAGCAAGGATTCTAGCA+AGG + chr1_1:28608120-28608139 None:intergenic 45.0%
TCTCCCCAATTATTAGCAGC+AGG + chr1_1:28608235-28608254 None:intergenic 45.0%
CTTGGTACGCATCCTATTGT+CGG - chr1_1:28608430-28608449 Msa0017240:intron 45.0%
CTGTGTCCTGTTTACTTTGC+TGG - chr1_1:28608538-28608557 Msa0017240:intron 45.0%
! AACTCGACTTGCCAGTACTT+TGG - chr1_1:28608572-28608591 Msa0017240:intron 45.0%
! ACTCGACTTGCCAGTACTTT+GGG - chr1_1:28608573-28608592 Msa0017240:intron 45.0%
TTTCGTGTCTCCCAAAGTAC+TGG + chr1_1:28608586-28608605 None:intergenic 45.0%
! CTTTGGGAGACACGAAATTC+AGG - chr1_1:28608589-28608608 Msa0017240:intron 45.0%
! GGTGTTGAGAAGCATACCAA+TGG + chr1_1:28608713-28608732 None:intergenic 45.0%
TGGTATGCTTCTCAACACCA+AGG - chr1_1:28608714-28608733 Msa0017240:intron 45.0%
GGTATGCTTCTCAACACCAA+GGG - chr1_1:28608715-28608734 Msa0017240:intron 45.0%
CATCATCTTGTGTCTGGAGA+GGG + chr1_1:28608922-28608941 None:intergenic 45.0%
CTCTCCAGACACAAGATGAT+GGG - chr1_1:28608921-28608940 Msa0017240:intron 45.0%
TAAGGACTGTGCAAAAGCTG+AGG - chr1_1:28609163-28609182 Msa0017240:intron 45.0%
CATTTGTGGCTTCAAGGACA+TGG + chr1_1:28609251-28609270 None:intergenic 45.0%
TGGTAGCATTTGTGGCTTCA+AGG + chr1_1:28609257-28609276 None:intergenic 45.0%
! GACATGTACCGGTGAAATTC+TGG + chr1_1:28609277-28609296 None:intergenic 45.0%
TGAACTGCAGAGACATGTAC+CGG + chr1_1:28609288-28609307 None:intergenic 45.0%
! CGCTATTCTTGTTTCCCAGA+TGG - chr1_1:28609335-28609354 Msa0017240:intron 45.0%
!! CTCTGCTTTTGTGCCATAGT+TGG + chr1_1:28609394-28609413 None:intergenic 45.0%
CTACGTTGTAGATGTCCTCA+TGG + chr1_1:28609512-28609531 None:intergenic 45.0%
TTAACAACGATCCTAGTCCG+CGG + chr1_1:28609686-28609705 None:intergenic 45.0%
ATGCGATAGACAAGGCTTCA+CGG + chr1_1:28609755-28609774 None:intergenic 45.0%
CATTCTCCATGCGATAGACA+AGG + chr1_1:28609763-28609782 None:intergenic 45.0%
CTTGTCTATCGCATGGAGAA+TGG - chr1_1:28609761-28609780 Msa0017240:CDS 45.0%
CTGCAGCCTTACCTAACAAA+TGG + chr1_1:28609824-28609843 None:intergenic 45.0%
TTTGTTAGGTAAGGCTGCAG+AGG - chr1_1:28609824-28609843 Msa0017240:CDS 45.0%
ACAGTCGACAACATTCCATG+AGG + chr1_1:28609882-28609901 None:intergenic 45.0%
!! AAGTGTTGGAATCTCTTCGC+CGG + chr1_1:28610021-28610040 None:intergenic 45.0%
TACATTGTTGGACAAGGCAG+TGG - chr1_1:28610074-28610093 Msa0017240:CDS 45.0%
! AGAACACGACGATCTTTTCG+AGG - chr1_1:28610099-28610118 Msa0017240:CDS 45.0%
!! GACGATCTTTTCGAGGTTGT+TGG - chr1_1:28610106-28610125 Msa0017240:CDS 45.0%
!! TCTTTTCGAGGTTGTTGGAG+TGG - chr1_1:28610111-28610130 Msa0017240:CDS 45.0%
GCTTATTGTGCAGCAGTACA+TGG - chr1_1:28610205-28610224 Msa0017240:CDS 45.0%
ATTGTGCAGCAGTACATGGT+TGG - chr1_1:28610209-28610228 Msa0017240:CDS 45.0%
TTGTGCAGCAGTACATGGTT+GGG - chr1_1:28610210-28610229 Msa0017240:CDS 45.0%
!! ATTCAGTTTCACCGACTCCA+AGG + chr1_1:28610504-28610523 None:intergenic 45.0%
TGGAGTCGGTGAAACTGAAT+CGG - chr1_1:28610504-28610523 Msa0017240:CDS 45.0%
AACTGAATCGGGAGTCTTGA+AGG - chr1_1:28610516-28610535 Msa0017240:CDS 45.0%
!!! TTTTTTTTGGGAGGCGGAGA+AGG - chr1_1:28610611-28610630 Msa0017240:CDS 45.0%
CACTGCGATTGATAAGTCGT+GGG - chr1_1:28610637-28610656 Msa0017240:CDS 45.0%
GTAAATTAGAGGGGAGTCCA+GGG + chr1_1:28611133-28611152 None:intergenic 45.0%
TGTAAATTAGAGGGGAGTCC+AGG + chr1_1:28611134-28611153 None:intergenic 45.0%
ATGAATGGCACCACAAGCTT+TGG - chr1_1:28611801-28611820 Msa0017240:CDS 45.0%
!! CAGCTTGTTGGAGACAACAA+TGG - chr1_1:28611860-28611879 Msa0017240:CDS 45.0%
GATGCCATGTGCACAAGAAA+AGG - chr1_1:28611934-28611953 Msa0017240:CDS 45.0%
GTAAAGCTTCAACACCCTCT+TGG - chr1_1:28611956-28611975 Msa0017240:CDS 45.0%
TGAGAGATGTGCAAACTCCA+TGG + chr1_1:28612160-28612179 None:intergenic 45.0%
!!! CAGTTGGCTTTTGTGGGAAT+TGG - chr1_1:28612300-28612319 Msa0017240:intron 45.0%
! ATCTTCTGGAGACAGTGTTG+TGG + chr1_1:28612328-28612347 None:intergenic 45.0%
! AAAACCACGACAAGGTGTCA+CGG - chr1_1:28612648-28612667 Msa0017240:intron 45.0%
! AAGGTGTCACGGATTCCATA+TGG - chr1_1:28612659-28612678 Msa0017240:intron 45.0%
AAGTACCTTTGGCGTAAACC+AGG - chr1_1:28612828-28612847 Msa0017240:intron 45.0%
CGTAAACCAGGACCAATATG+TGG - chr1_1:28612840-28612859 Msa0017240:intron 45.0%
AAACCAGGACCAATATGTGG+TGG - chr1_1:28612843-28612862 Msa0017240:intron 45.0%
TCACTTCCTCCACCACATAT+TGG + chr1_1:28612855-28612874 None:intergenic 45.0%
TACCAATGAGACCACGTAAG+CGG + chr1_1:28612962-28612981 None:intergenic 45.0%
!! CTTAGCTTTACCTCCATCAG+GGG + chr1_1:28612986-28613005 None:intergenic 45.0%
!! CCTTAGCTTTACCTCCATCA+GGG + chr1_1:28612987-28613006 None:intergenic 45.0%
GTCATGGTGGCAAACTGTTA+AGG + chr1_1:28613010-28613029 None:intergenic 45.0%
CATTCATGCCTCTTGTGTCA+TGG + chr1_1:28613026-28613045 None:intergenic 45.0%
! GTCCCAGTTTGCCATTTCAT+TGG - chr1_1:28613087-28613106 Msa0017240:CDS 45.0%
ATGGGTTCCCAATCATTCTG+AGG - chr1_1:28613125-28613144 Msa0017240:CDS 45.0%
GGATGGTCCTCAGAATGATT+GGG + chr1_1:28613135-28613154 None:intergenic 45.0%
AGGATGGTCCTCAGAATGAT+TGG + chr1_1:28613136-28613155 None:intergenic 45.0%
!!! AATGTATTTTTTTTTTTTTT+TGG - chr1_1:28610598-28610617 Msa0017240:CDS 5.0%
!!! ATGTATTTTTTTTTTTTTTT+GGG - chr1_1:28610599-28610618 Msa0017240:CDS 5.0%
!! AAAACTATATATTATATTAT+AGG - chr1_1:28611426-28611445 Msa0017240:CDS 5.0%
TCCTCCTCGAGGAGATTTCT+TGG - chr1_1:28607312-28607331 Msa0017240:CDS 50.0%
TCAACAGCTAGGATTCCACG+TGG + chr1_1:28607854-28607873 None:intergenic 50.0%
CAAGGATTCTAGCAAGGACG+GGG + chr1_1:28608114-28608133 None:intergenic 50.0%
GCAAGGATTCTAGCAAGGAC+GGG + chr1_1:28608115-28608134 None:intergenic 50.0%
GTGGCGCAAGTCACATATGT+TGG - chr1_1:28608363-28608382 Msa0017240:intron 50.0%
TTTGGTATGCCTGCTCGAGA+TGG - chr1_1:28608682-28608701 Msa0017240:intron 50.0%
ATGGAAAGTCCATCTCGAGC+AGG + chr1_1:28608694-28608713 None:intergenic 50.0%
! GCTCGAGATGGACTTTCCAT+TGG - chr1_1:28608694-28608713 Msa0017240:intron 50.0%
CCATCATCTTGTGTCTGGAG+AGG + chr1_1:28608923-28608942 None:intergenic 50.0%
CCTCTCCAGACACAAGATGA+TGG - chr1_1:28608920-28608939 Msa0017240:intron 50.0%
GGCGCAGAAACAACCAACTA+TGG - chr1_1:28609378-28609397 Msa0017240:intron 50.0%
GTCAGGTCCTCCAATGAAGA+GGG + chr1_1:28609730-28609749 None:intergenic 50.0%
! GTGAAGCCTTGTCTATCGCA+TGG - chr1_1:28609754-28609773 Msa0017240:CDS 50.0%
TCTATCGCATGGAGAATGGC+AGG - chr1_1:28609765-28609784 Msa0017240:CDS 50.0%
CTATCGCATGGAGAATGGCA+GGG - chr1_1:28609766-28609785 Msa0017240:CDS 50.0%
AGGTAAGGCTGCAGAGGAAA+AGG - chr1_1:28609830-28609849 Msa0017240:CDS 50.0%
CGGTGTGATGCAGAAAGAGT+TGG - chr1_1:28609908-28609927 Msa0017240:CDS 50.0%
ATTCACTGCCTTGTGCCTGA+AGG + chr1_1:28609952-28609971 None:intergenic 50.0%
TGGTGTGACCATCCTGAACT+TGG - chr1_1:28610131-28610150 Msa0017240:CDS 50.0%
GGAGTCGGTGAAACTGAATC+GGG - chr1_1:28610505-28610524 Msa0017240:CDS 50.0%
TGAATCGGGAGTCTTGAAGG+TGG - chr1_1:28610519-28610538 Msa0017240:CDS 50.0%
GAATCGGGAGTCTTGAAGGT+GGG - chr1_1:28610520-28610539 Msa0017240:CDS 50.0%
GCACTGCGATTGATAAGTCG+TGG - chr1_1:28610636-28610655 Msa0017240:CDS 50.0%
GCAACGACCAAAAGTCGTGA+CGG + chr1_1:28610958-28610977 None:intergenic 50.0%
CACTTTCTCATAGCCAGCCA+TGG - chr1_1:28612140-28612159 Msa0017240:intron 50.0%
AGATGTGCAAACTCCATGGC+TGG + chr1_1:28612156-28612175 None:intergenic 50.0%
GCCAAACACTCCTCTTCCTA+AGG - chr1_1:28612365-28612384 Msa0017240:intron 50.0%
!! GCCTTAGGAAGAGGAGTGTT+TGG + chr1_1:28612369-28612388 None:intergenic 50.0%
TTCGAACATGACCTCTACCC+TGG - chr1_1:28612568-28612587 Msa0017240:intron 50.0%
! CCTTGTCGTGGTTTTCCGAA+TGG + chr1_1:28612643-28612662 None:intergenic 50.0%
CCATTCGGAAAACCACGACA+AGG - chr1_1:28612640-28612659 Msa0017240:intron 50.0%
TGTCACGGATTCCATATGGC+TGG - chr1_1:28612663-28612682 Msa0017240:intron 50.0%
CTCTTTGTTCGCCAGCCATA+TGG + chr1_1:28612677-28612696 None:intergenic 50.0%
TTGCGTTCTCCTGTAGCGAT+TGG + chr1_1:28612730-28612749 None:intergenic 50.0%
TTGGTCCTGGTTTACGCCAA+AGG + chr1_1:28612836-28612855 None:intergenic 50.0%
! AAGCGGTTGTTGCTTGCACT+TGG + chr1_1:28612945-28612964 None:intergenic 50.0%
AACCGCTTACGTGGTCTCAT+TGG - chr1_1:28612957-28612976 Msa0017240:intron 50.0%
CCCTGATGGAGGTAAAGCTA+AGG - chr1_1:28612984-28613003 Msa0017240:CDS 50.0%
!! GCCTTAGCTTTACCTCCATC+AGG + chr1_1:28612988-28613007 None:intergenic 50.0%
GTTTGCCACCATGACACAAG+AGG - chr1_1:28613015-28613034 Msa0017240:CDS 50.0%
TCATGCCTCTTGTGTCATGG+TGG + chr1_1:28613023-28613042 None:intergenic 50.0%
GAAGCTCTCAAAGTCGAACC+TGG - chr1_1:28613060-28613079 Msa0017240:CDS 50.0%
TTGGCAATAAGGCTGCTGCA+TGG - chr1_1:28613106-28613125 Msa0017240:CDS 50.0%
TGGCAATAAGGCTGCTGCAT+GGG - chr1_1:28613107-28613126 Msa0017240:CDS 50.0%
GAGGCACATGAAGAGGCTTG+AGG + chr1_1:28606832-28606851 None:intergenic 55.0%
GCCAAGAAATCTCCTCGAGG+AGG + chr1_1:28607316-28607335 None:intergenic 55.0%
GGCACTAGCATGGCAATTGC+TGG - chr1_1:28607962-28607981 Msa0017240:CDS 55.0%
!! TCTCAACACCAAGGGCGTCA+TGG - chr1_1:28608723-28608742 Msa0017240:intron 55.0%
GGCTCCCATCATCTTGTGTC+TGG + chr1_1:28608928-28608947 None:intergenic 55.0%
TGATGGGAGCCTAGTGCACT+AGG - chr1_1:28608937-28608956 Msa0017240:intron 55.0%
GTAGCGATCTTTGTGGACCG+CGG - chr1_1:28609666-28609685 Msa0017240:CDS 55.0%
ATCTTTGTGGACCGCGGACT+AGG - chr1_1:28609672-28609691 Msa0017240:CDS 55.0%
CGTCAGGTCCTCCAATGAAG+AGG + chr1_1:28609731-28609750 None:intergenic 55.0%
! TGGAGAATGGCAGGGCATTC+AGG - chr1_1:28609774-28609793 Msa0017240:CDS 55.0%
AGTCGTGGGAACGCCACAAA+TGG - chr1_1:28610651-28610670 Msa0017240:CDS 55.0%
GGGAACGCCACAAATGGCTA+TGG - chr1_1:28610657-28610676 Msa0017240:CDS 55.0%
ATTAGAGGGGAGTCCAGGGT+TGG + chr1_1:28611129-28611148 None:intergenic 55.0%
GAATCCGTGACACCTTGTCG+TGG + chr1_1:28612655-28612674 None:intergenic 55.0%
CCTCCACCACATATTGGTCC+TGG + chr1_1:28612849-28612868 None:intergenic 55.0%
CCAGGACCAATATGTGGTGG+AGG - chr1_1:28612846-28612865 Msa0017240:intron 55.0%
! CGGTTGTTGCTTGCACTTGG+TGG + chr1_1:28612942-28612961 None:intergenic 55.0%
GCAAGCAACAACCGCTTACG+TGG - chr1_1:28612948-28612967 Msa0017240:intron 55.0%
! GTCTCATTGGTAGCCCCTGA+TGG - chr1_1:28612970-28612989 Msa0017240:intron 55.0%
! TCATTGGTAGCCCCTGATGG+AGG - chr1_1:28612973-28612992 Msa0017240:intron 55.0%
TATGACGGCCATGACGCCCT+TGG + chr1_1:28608734-28608753 None:intergenic 60.0%
CAAGGGCGACCTAGTGCACT+AGG + chr1_1:28608949-28608968 None:intergenic 60.0%
GACAAGGCTTCACGGTCGTC+AGG + chr1_1:28609747-28609766 None:intergenic 60.0%
GGGGTTAGAGGTTCCAACCC+TGG - chr1_1:28611113-28611132 Msa0017240:CDS 60.0%
TGGCAAACTGGGACGGTACC+AGG + chr1_1:28613081-28613100 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 28606686 28613167 28606686 ID=Msa0017240;Name=Msa0017240
chr1_1 mRNA 28606686 28613167 28606686 ID=Msa0017240-mRNA-1;Parent=Msa0017240;Name=Msa0017240-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|0.71|1|1|7|0|1110
chr1_1 exon 28612982 28613167 28612982 ID=Msa0017240-mRNA-1:exon:9568;Parent=Msa0017240-mRNA-1
chr1_1 exon 28611073 28612068 28611073 ID=Msa0017240-mRNA-1:exon:9567;Parent=Msa0017240-mRNA-1
chr1_1 exon 28610954 28611001 28610954 ID=Msa0017240-mRNA-1:exon:9566;Parent=Msa0017240-mRNA-1
chr1_1 exon 28609570 28610808 28609570 ID=Msa0017240-mRNA-1:exon:9565;Parent=Msa0017240-mRNA-1
chr1_1 exon 28607898 28607990 28607898 ID=Msa0017240-mRNA-1:exon:9564;Parent=Msa0017240-mRNA-1
chr1_1 exon 28607442 28607550 28607442 ID=Msa0017240-mRNA-1:exon:9563;Parent=Msa0017240-mRNA-1
chr1_1 exon 28606686 28607347 28606686 ID=Msa0017240-mRNA-1:exon:9562;Parent=Msa0017240-mRNA-1
chr1_1 CDS 28612982 28613167 28612982 ID=Msa0017240-mRNA-1:cds;Parent=Msa0017240-mRNA-1
chr1_1 CDS 28611073 28612068 28611073 ID=Msa0017240-mRNA-1:cds;Parent=Msa0017240-mRNA-1
chr1_1 CDS 28610954 28611001 28610954 ID=Msa0017240-mRNA-1:cds;Parent=Msa0017240-mRNA-1
chr1_1 CDS 28609570 28610808 28609570 ID=Msa0017240-mRNA-1:cds;Parent=Msa0017240-mRNA-1
chr1_1 CDS 28607898 28607990 28607898 ID=Msa0017240-mRNA-1:cds;Parent=Msa0017240-mRNA-1
chr1_1 CDS 28607442 28607550 28607442 ID=Msa0017240-mRNA-1:cds;Parent=Msa0017240-mRNA-1
chr1_1 CDS 28606686 28607347 28606686 ID=Msa0017240-mRNA-1:cds;Parent=Msa0017240-mRNA-1
Gene Sequence

>Msa0017240

ATGGCAATGGCTACATGTTATAATGTAACTCTTAGTGCTTCAAACAATATCTGGATGACTGATGATGTTATGATAAAACGTGTTCCTCTTTTGTGTCTCCAAATTGCTTATAATCTTTTGGTTTCTCGTTTTCTCTTCTTCATCCTCAAGCCTCTTCATGTGCCTCTCATTGTTGCACAAATGTTGGCTGGTTTTTCTGTTAGTCGAAGTCTATTGGGATATTTCGAGGGGGTAATTACCTTGTTTTACAATCCACGTGGAATCCTAGCTGTTGAAACCATTTCAAACTTGGGAATTATGTACTATGTGTTCCTAAGTGGTTTAGAGATGAATTCAGACACCATCTTAAGATCAAGGAAGAAAGGCACTAGCATGGCAATTGCTGGCATTGTGACATCAATGTTATTTGGTGTTGGATTTCTTACTCTGCAACAAAAACTTCTAGATAAAAAAGAAAAAACTCATATTAAAGCTTATCTATTTTGGTGTTTAACACTTTCTGTCACAGGCTTCCCCGTCCTTGCTAGAATCCTTGCTAAGCTTAAGCTTTTGTATACAAAGCTTGGAAAGGATACATTAACAGCAGCTATGTTAACTGATGCATATGGTTGGGTTTTGTTTACATTGTTGATTCCTGCTGCTAATAATTGGGGAGAACGTTATTATCTCTCAGTAATCACTACCTTTTTGTTCATAGCTTTTTGTTTTACTGTGGTGAGACCTATCCTTACTCCAATCATTGAAAACCGAACAAATAAGAACATGTGGCGCAAGTCACATATGTTGGACGTATTTACAGGATTGTTTATTTGTTCGTATATTACGGATTTTCTTGGTACGCATCCTATTGTCGGAGCTTTTGTGTTCGGATTGATTTTGCCTCATGGAAAGTTTGCTGATATGGTTATGGAAATGTCAGATGACTTTGTTACTGGTATTCTGTGTCCTGTTTACTTTGCTGGATTTGGTTTTAAACTCGACTTGCCAGTACTTTGGGAGACACGAAATTCAGGTTTAATGATGCTTATTATGGTTTTGTTATGCATACCAAAAGTTTTGAGCTCTTTGATCGTCACTTTCTTTTTTGGTATGCCTGCTCGAGATGGACTTTCCATTGGTATGCTTCTCAACACCAAGGGCGTCATGGCCGTCATACTACAAAATGTTGCTTGGGACAAAAGGAAGTCACGAGTTCAAATCCTGAAAGAGAAAACATCTTTGTTTGTAGGGTTTTTGGATCCATGTTCTTTCATGGTTATGACGCTTGCTATTATAGTAATGACAGTGATAGTCTCTCCGTTAATAAATGCCATATACAAACCAAAATTCCGATTCATGCAATCACAATTAAGGACTGTGCAAAAGCTGAGGTTTGATATGGAGCTTCGAGTCGTCGCTTGTGTCCACAATGCCAAACATGCAACTAACATGATCCATGTCCTTGAAGCCACAAATGCTACCAGAATTTCACCGGTACATGTCTCTGCAGTTCACCTTGTTGAACTCACTAGACATGGCACCGCTATTCTTGTTTCCCAGATGGATCATTTAAACAACATAGTAGGCGCAGAAACAACCAACTATGGCACAAAAGCAGAGTTTGAGATCATAACTACTGCATTTAAAGAATTTGTAGAACAATACAATGCTGTTAGATTTGACACATCAAGTGTTGTCTCATCCTATACAACAATCCATGAGGACATCTACAACGTAGCTGAAGAGAAACGCGCGAGCTTAATTCTCCTTCCCTTTCACAAAGAGTACTCAACAGTAGGAGGTTCTCCAGAAATAAGCCACAATGAACATTGTGAGATAAACAAAAATGTTCTTCAACACGCACCTTGTTCTGTAGCGATCTTTGTGGACCGCGGACTAGGATCGTTGTTAAAAACAAAGTTGCGCATTATAACCCTCTTCATTGGAGGACCTGACGACCGTGAAGCCTTGTCTATCGCATGGAGAATGGCAGGGCATTCAGGAACACAGTTACATGTTGTGAGGATCCATTTGTTAGGTAAGGCTGCAGAGGAAAAGGTATTGAAAAGGAAAATAAGCAAGTCTCCTCATGGAATGTTGTCGACTGTTATGGACGGTGTGATGCAGAAAGAGTTGGATGAAGAGTATATATTTTCCTTCAGGCACAAGGCAGTGAATAATAACGATTCAATTGTTTACTCAGAAAAAGAAGTGCATTCAGATACCGGCGAAGAGATTCCAACACTTCTTAATGAGATTGATAAACCTGGATATGATTTGTACATTGTTGGACAAGGCAGTGGTAAGAACACGACGATCTTTTCGAGGTTGTTGGAGTGGTGTGACCATCCTGAACTTGGTGTTATAGGTGACATATTAGCTTCAACTAGTTTTGGTACACACTCTTCTGTGCTTATTGTGCAGCAGTACATGGTTGGGAGAAAACGTGTTGTTTATAAATGTCATGATGAAATGAAAAATAGTCCCGAGCTTGTTGGAGACAACAATGGTACTATGCATGCAGACAATACAAACTTTGTAGAAGTAGGTAGCTATGCATGGATGCCATGTGCACAAGAAAAGTTGGCTTTTGTGGGAATTGGAGCCACAACACTGTCTCCAGAAGATTATTGGCAAAGTATTTGGCCAAACACTCCTCTTCCTAAGGCTTTCTTTGACCTATTGCTACCTTATGGCAAAACAAATAATCTACCTATCAAAACCGAAGAATTGAACCAATACTCGACACTTTTTTTCGAACATGACCTCTACCCTGGAAAGAAAATGATCTTAGGTAACAATCATTCTCTTAGAAAGACAGTACGACCATTCGGAAAACCACGACAAGGTGTCACGGATTCCATATGGCTGGCGAACAAAGAGAGACAAAGTCTCGACGACTTTTGTAATAGTCCAATCGCTACAGGAGAACGCAAACACTGTGTATCATCCTTGGAATCGATGGTTGATCATGTCATTTCACATTTTGGAACGTCAAAGATTAAGGCGATTTCAAGTACCTTTGGCGTAAACCAGGACCAATATGTGGTGGAGGAAGTGAAAAAAGTTGGGGACAATGCAGTGATGTGTCATAGATTGAATTTCGAAAAAGTTGTATTCAATTGCCACCAAGTGCAAGCAACAACCGCTTACGTGGTCTCATTGGTAGCCCCTGATGGAGGTAAAGCTAAGGCCTTAACAGTTTGCCACCATGACACAAGAGGCATGAATGCTGAATTGCTTTATGAAGCTCTCAAAGTCGAACCTGGTACCGTCCCAGTTTGCCATTTCATTGGCAATAAGGCTGCTGCATGGGTTCCCAATCATTCTGAGGACCATCCTTGTGTCATCTAG
Protein sequence

>Msa0017240

MAMATCYNVTLSASNNIWMTDDVMIKRVPLLCLQIAYNLLVSRFLFFILKPLHVPLIVAQMLAGFSVSRSLLGYFEGVITLFYNPRGILAVETISNLGIMYYVFLSGLEMNSDTILRSRKKGTSMAIAGIVTSMLFGVGFLTLQQKLLDKKEKTHIKAYLFWCLTLSVTGFPVLARILAKLKLLYTKLGKDTLTAAMLTDAYGWVLFTLLIPAANNWGERYYLSVITTFLFIAFCFTVVRPILTPIIENRTNKNMWRKSHMLDVFTGLFICSYITDFLGTHPIVGAFVFGLILPHGKFADMVMEMSDDFVTGILCPVYFAGFGFKLDLPVLWETRNSGLMMLIMVLLCIPKVLSSLIVTFFFGMPARDGLSIGMLLNTKGVMAVILQNVAWDKRKSRVQILKEKTSLFVGFLDPCSFMVMTLAIIVMTVIVSPLINAIYKPKFRFMQSQLRTVQKLRFDMELRVVACVHNAKHATNMIHVLEATNATRISPVHVSAVHLVELTRHGTAILVSQMDHLNNIVGAETTNYGTKAEFEIITTAFKEFVEQYNAVRFDTSSVVSSYTTIHEDIYNVAEEKRASLILLPFHKEYSTVGGSPEISHNEHCEINKNVLQHAPCSVAIFVDRGLGSLLKTKLRIITLFIGGPDDREALSIAWRMAGHSGTQLHVVRIHLLGKAAEEKVLKRKISKSPHGMLSTVMDGVMQKELDEEYIFSFRHKAVNNNDSIVYSEKEVHSDTGEEIPTLLNEIDKPGYDLYIVGQGSGKNTTIFSRLLEWCDHPELGVIGDILASTSFGTHSSVLIVQQYMVGRKRVVYKCHDEMKNSPELVGDNNGTMHADNTNFVEVGSYAWMPCAQEKLAFVGIGATTLSPEDYWQSIWPNTPLPKAFFDLLLPYGKTNNLPIKTEELNQYSTLFFEHDLYPGKKMILGNNHSLRKTVRPFGKPRQGVTDSIWLANKERQSLDDFCNSPIATGERKHCVSSLESMVDHVISHFGTSKIKAISSTFGVNQDQYVVEEVKKVGDNAVMCHRLNFEKVVFNCHQVQATTAYVVSLVAPDGGKAKALTVCHHDTRGMNAELLYEALKVEPGTVPVCHFIGNKAAAWVPNHSEDHPCVI*