Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063520 | sp|Q9C801|MOS2_ARATH | 50.000 | 468 | 201 | 11 | 4 | 451 | 2 | 456 | 1.75e-134 | 398 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063520 | A0A396JQ22 | 95.405 | 457 | 17 | 1 | 1 | 457 | 1 | 453 | 0.0 | 867 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0063520 | Msa0095360 | 0.816704 | 4.821774e-52 | -8.615850e-47 |
| Msa0063520 | Msa0095770 | 0.805792 | 1.125133e-49 | -8.615850e-47 |
| Msa0063520 | Msa0172980 | 0.816603 | 5.079139e-52 | -8.615850e-47 |
| Msa0063520 | Msa0190590 | 0.812929 | 3.310249e-51 | -8.615850e-47 |
| Msa0063520 | Msa0245580 | 0.802435 | 5.617319e-49 | -8.615850e-47 |
| Msa0063520 | Msa0256140 | 0.806161 | 9.410132e-50 | -8.615850e-47 |
| Msa0063520 | Msa0296790 | 0.801452 | 8.946154e-49 | -8.615850e-47 |
| Msa0063520 | Msa0377290 | 0.814114 | 1.816449e-51 | -8.615850e-47 |
| Msa0063520 | Msa0385500 | 0.822220 | 2.661440e-53 | -8.615850e-47 |
| Msa0063520 | Msa0404630 | 0.848067 | 7.762644e-60 | -8.615850e-47 |
| Msa0063520 | Msa0413530 | 0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0063520 | Msa0426580 | 0.800304 | 1.534459e-48 | -8.615850e-47 |
| Msa0063520 | Msa0462600 | 0.824964 | 6.065855e-54 | -8.615850e-47 |
| Msa0063520 | Msa0491000 | 0.803133 | 4.031553e-49 | -8.615850e-47 |
| Msa0063520 | Msa0542560 | 0.821663 | 3.581296e-53 | -8.615850e-47 |
| Msa0063520 | Msa0549450 | 0.807982 | 3.873715e-50 | -8.615850e-47 |
| Msa0063520 | Msa0600450 | 0.800594 | 1.339495e-48 | -8.615850e-47 |
| Msa0063520 | Msa0679360 | 0.805262 | 1.453533e-49 | -8.615850e-47 |
| Msa0063520 | Msa0690310 | 0.810438 | 1.152723e-50 | -8.615850e-47 |
| Msa0063520 | Msa0693210 | 0.809191 | 2.137617e-50 | -8.615850e-47 |
| Msa0063520 | Msa0741440 | 0.807074 | 6.037289e-50 | -8.615850e-47 |
| Msa0063520 | Msa0746170 | 0.812779 | 3.570170e-51 | -8.615850e-47 |
| Msa0063520 | Msa0746210 | 0.815895 | 7.312176e-52 | -8.615850e-47 |
| Msa0063520 | Msa0769970 | 0.809759 | 1.614334e-50 | -8.615850e-47 |
| Msa0063520 | Msa0786750 | 0.800192 | 1.617205e-48 | -8.615850e-47 |
| Msa0063520 | Msa0794970 | 0.803668 | 3.122965e-49 | -8.615850e-47 |
| Msa0063520 | Msa0828590 | 0.817383 | 3.393819e-52 | -8.615850e-47 |
| Msa0063520 | Msa0831100 | 0.810770 | 9.769408e-51 | -8.615850e-47 |
| Msa0063520 | Msa1037520 | 0.806858 | 6.704987e-50 | -8.615850e-47 |
| Msa0063520 | Msa1039810 | 0.801436 | 9.014449e-49 | -8.615850e-47 |
| Msa0063520 | Msa1128280 | 0.815321 | 9.816432e-52 | -8.615850e-47 |
| Msa0063520 | Msa1165270 | 0.814531 | 1.469262e-51 | -8.615850e-47 |
| Msa0063520 | Msa1212730 | 0.812217 | 4.736571e-51 | -8.615850e-47 |
| Msa0063520 | Msa1272600 | 0.807987 | 3.864165e-50 | -8.615850e-47 |
| Msa0063520 | Msa1276150 | 0.800105 | 1.684376e-48 | -8.615850e-47 |
| Msa0063520 | Msa1310450 | 0.808690 | 2.736514e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063520 | MtrunA17_Chr1g0164771 | 95.405 | 457 | 17 | 1 | 1 | 457 | 1 | 453 | 0.0 | 867 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063520 | AT1G33520.1 | 50.000 | 468 | 201 | 11 | 4 | 451 | 2 | 456 | 1.78e-135 | 398 |
| Msa0063520 | AT4G25020.1 | 40.879 | 455 | 187 | 13 | 4 | 457 | 2 | 375 | 1.33e-93 | 288 |
Find 169 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGTTGCAGAAGTTTA+AGG | 0.220108 | 1_2:+24101481 | Msa0063520:CDS |
| GCAGAAGTTTAAGGAGGATA+TGG | 0.280618 | 1_2:+24101490 | Msa0063520:CDS |
| TTTGAAGAAAGGAGAGGTTT+TGG | 0.289276 | 1_2:+24102150 | Msa0063520:CDS |
| AGGACTGGTAAGGAGGGTTT+AGG | 0.303667 | 1_2:+24101665 | Msa0063520:CDS |
| AGGTGAGAGGAATGGGAGGG+GGG | 0.304767 | 1_2:+24101724 | Msa0063520:CDS |
| GGGGAGTGGTGAGGAGGTTA+AGG | 0.316917 | 1_2:+24101865 | Msa0063520:CDS |
| AACACATGGCTGAGTATATA+GGG | 0.322523 | 1_2:+24102404 | Msa0063520:CDS |
| GGACTGGTAAGGAGGGTTTA+GGG | 0.326808 | 1_2:+24101666 | Msa0063520:CDS |
| GTTGAAGGATTTGAAGATTC+GGG | 0.328531 | 1_2:+24101946 | Msa0063520:CDS |
| CGAAGAAAGGTGAGAGGAAT+GGG | 0.331896 | 1_2:+24101717 | Msa0063520:CDS |
| GGAAGAGAAGGGGAGGAAAC+AGG | 0.335345 | 1_2:+24102060 | Msa0063520:CDS |
| GGAGAAGTTGCCTGATGATA+TGG | 0.335770 | 1_2:+24101511 | Msa0063520:CDS |
| TACTACTTGTGATATATCTA+TGG | 0.338465 | 1_2:+24102186 | Msa0063520:CDS |
| TATAGGGGACCCAAGCTTAC+TGG | 0.348314 | 1_2:+24102420 | Msa0063520:CDS |
| GAACACATGGCTGAGTATAT+AGG | 0.362690 | 1_2:+24102403 | Msa0063520:CDS |
| AAGGTGAGAGGAATGGGAGG+GGG | 0.363599 | 1_2:+24101723 | Msa0063520:CDS |
| GGAAAGAAGGAATGGGGATT+GGG | 0.375744 | 1_2:+24101600 | Msa0063520:CDS |
| TGATCAGAAACTGTGGTATC+AGG | 0.378261 | 1_2:-24101341 | None:intergenic |
| AGTGGAGGATGTGGCGGAGT+TGG | 0.379520 | 1_2:+24101892 | Msa0063520:CDS |
| GTTGAGAGGGATTCGGATAA+GGG | 0.381178 | 1_2:+24102328 | Msa0063520:CDS |
| CTCTCACCTTTCTTCGAACT+CGG | 0.382191 | 1_2:-24101710 | None:intergenic |
| TTGAGGAGGAGAGGTGTTTG+AGG | 0.383923 | 1_2:+24101921 | Msa0063520:CDS |
| AAAGGTGAGAGGAATGGGAG+GGG | 0.385222 | 1_2:+24101722 | Msa0063520:CDS |
| ATTAGGGTTTGGGGTTTAGA+AGG | 0.385304 | 1_2:-24101206 | None:intergenic |
| GGGTTTGGAGCGGCGTTGCT+TGG | 0.385377 | 1_2:+24101566 | Msa0063520:CDS |
| CTAGTGTTGTGGGGAGAGAT+GGG | 0.391010 | 1_2:+24101816 | Msa0063520:CDS |
| TGTTGAGAGGGATTCGGATA+AGG | 0.392094 | 1_2:+24102327 | Msa0063520:CDS |
| GCGGCGTTGCTTGGTGGGTA+TGG | 0.393169 | 1_2:+24101575 | Msa0063520:CDS |
| GGGAGACTTTATTTGAAGAA+AGG | 0.393721 | 1_2:+24102139 | Msa0063520:CDS |
| TGTATTGTCTGGTAGACATA+AGG | 0.395852 | 1_2:+24102288 | Msa0063520:CDS |
| GGATGTGGCGGAGTTGGGTT+CGG | 0.398198 | 1_2:+24101898 | Msa0063520:CDS |
| AGAAGGAGGATAGAGTTGTT+AGG | 0.405574 | 1_2:+24101762 | Msa0063520:CDS |
| TGGAAAGAAGGAATGGGGAT+TGG | 0.405983 | 1_2:+24101599 | Msa0063520:CDS |
| TAAGGAGGGTTTAGGGTTTG+TGG | 0.406647 | 1_2:+24101673 | Msa0063520:CDS |
| TTGGAGCGGCGTTGCTTGGT+GGG | 0.407184 | 1_2:+24101570 | Msa0063520:CDS |
| TGAGGGTTTGTTCGATTTGG+AGG | 0.407404 | 1_2:-24101120 | None:intergenic |
| TTTGGAGCGGCGTTGCTTGG+TGG | 0.409297 | 1_2:+24101569 | Msa0063520:CDS |
| GATGTACCGGTGGATGGGTT+TGG | 0.410391 | 1_2:+24101551 | Msa0063520:CDS |
| GGACCTGTTCTTGTATTGTC+TGG | 0.415940 | 1_2:+24102277 | Msa0063520:CDS |
| GGTAGACATAAGGGTGCCTT+TGG | 0.417859 | 1_2:+24102298 | Msa0063520:CDS |
| TATGGGGTTTGATGAGTATA+AGG | 0.420777 | 1_2:+24101529 | Msa0063520:CDS |
| GGCGGAGTTGGGTTCGGTTG+AGG | 0.421407 | 1_2:+24101904 | Msa0063520:CDS |
| GCTAGTGTTGTGGGGAGAGA+TGG | 0.421433 | 1_2:+24101815 | Msa0063520:CDS |
| AGTTGAAGGATTTGAAGATT+CGG | 0.424006 | 1_2:+24101945 | Msa0063520:CDS |
| GAAGAGGAGGACTGGTAAGG+AGG | 0.432186 | 1_2:+24101658 | Msa0063520:CDS |
| TCGAAGAAAGGTGAGAGGAA+TGG | 0.439947 | 1_2:+24101716 | Msa0063520:CDS |
| TGCGCCGAGGGTGAAGGCTT+CGG | 0.440553 | 1_2:+24101451 | Msa0063520:CDS |
| GGGTTTAGAAGGATCGAATT+CGG | 0.443472 | 1_2:-24101195 | None:intergenic |
| CTTTGGAAGTCTTGTTGAGA+GGG | 0.445545 | 1_2:+24102315 | Msa0063520:CDS |
| CACCCTCGGCGCATCAGCAT+TGG | 0.446463 | 1_2:-24101441 | None:intergenic |
| GTTGACGAGAGGAGAGTGAA+TGG | 0.447888 | 1_2:+24102016 | Msa0063520:CDS |
| GTGGAGGATGTGGCGGAGTT+GGG | 0.449240 | 1_2:+24101893 | Msa0063520:CDS |
| GGAGAGTGAGAGGAAGAAGA+AGG | 0.450838 | 1_2:+24101745 | Msa0063520:CDS |
| TTGTTAGGATTGTGAGAGGG+AGG | 0.454109 | 1_2:+24101777 | Msa0063520:CDS |
| GGTTGAAGAGTAAGCGAGGG+AGG | 0.457066 | 1_2:+24101987 | Msa0063520:CDS |
| GAGGGTGAAGGCTTCGGTTG+AGG | 0.457747 | 1_2:+24101457 | Msa0063520:CDS |
| GGTTTGAAAGCTAGTGTTGT+GGG | 0.464274 | 1_2:+24101806 | Msa0063520:CDS |
| TGTGGAAGAATCTTCGTTGA+AGG | 0.466165 | 1_2:-24101147 | None:intergenic |
| ATTGTGAGAGGGAGGGATGT+TGG | 0.467297 | 1_2:+24101785 | Msa0063520:CDS |
| AATCAATGTCCCAGTAAGCT+TGG | 0.470609 | 1_2:-24102430 | None:intergenic |
| CTACCAGACAATACAAGAAC+AGG | 0.473226 | 1_2:-24102280 | None:intergenic |
| CGTTGCTTGGTGGGTATGGA+TGG | 0.473228 | 1_2:+24101579 | Msa0063520:CDS |
| GAGTAAGCGAGGGAGGGATG+AGG | 0.474487 | 1_2:+24101994 | Msa0063520:CDS |
| AAGTCTTGTTGAGAGGGATT+CGG | 0.475431 | 1_2:+24102321 | Msa0063520:CDS |
| AAGAGGAGGACTGGTAAGGA+GGG | 0.476122 | 1_2:+24101659 | Msa0063520:CDS |
| GAGAGTAGGGAGATTATTCA+AGG | 0.477857 | 1_2:+24102211 | Msa0063520:CDS |
| AGAGTTGTTAGGATTGTGAG+AGG | 0.481489 | 1_2:+24101773 | Msa0063520:CDS |
| GGTGAAGAGGAGGACTGGTA+AGG | 0.484503 | 1_2:+24101655 | Msa0063520:CDS |
| TGATTAGCCGAAGTTTGAAA+GGG | 0.487994 | 1_2:+24102116 | Msa0063520:CDS |
| TATATCTATGGATGAGAGTA+GGG | 0.489867 | 1_2:+24102198 | Msa0063520:CDS |
| ATCAATGTCCCAGTAAGCTT+GGG | 0.494827 | 1_2:-24102429 | None:intergenic |
| TGAGGAGGTTAAGGTTAAAG+TGG | 0.494894 | 1_2:+24101874 | Msa0063520:CDS |
| CCTTTGGAAGTCTTGTTGAG+AGG | 0.495502 | 1_2:+24102314 | Msa0063520:CDS |
| GGTGGGTATGGATGGAAAGA+AGG | 0.497455 | 1_2:+24101587 | Msa0063520:CDS |
| TCATCAAACCCCATATCATC+AGG | 0.499367 | 1_2:-24101521 | None:intergenic |
| AAAGGGTTGAAGAGTAAGCG+AGG | 0.502096 | 1_2:+24101983 | Msa0063520:CDS |
| ATAGATATATCACAAGTAGT+AGG | 0.503438 | 1_2:-24102184 | None:intergenic |
| GTTAGTGGTAAGGAAGAGAA+GGG | 0.504160 | 1_2:+24102049 | Msa0063520:CDS |
| GAGGTGTTTGAGGAAGTTGA+AGG | 0.505438 | 1_2:+24101931 | Msa0063520:CDS |
| ATTCAACATTGAGCCTCTCA+TGG | 0.507391 | 1_2:-24102378 | None:intergenic |
| ATAGGGGACCCAAGCTTACT+GGG | 0.508117 | 1_2:+24102421 | Msa0063520:CDS |
| TGCTGATGCGCCGAGGGTGA+AGG | 0.508189 | 1_2:+24101445 | Msa0063520:CDS |
| CGGGGTCGTGATGAGGAGAA+AGG | 0.508414 | 1_2:+24101965 | Msa0063520:CDS |
| TATAAGGATGTACCGGTGGA+TGG | 0.509199 | 1_2:+24101545 | Msa0063520:CDS |
| GTATTGTCTGGTAGACATAA+GGG | 0.509248 | 1_2:+24102289 | Msa0063520:CDS |
| CCACCTCCGAGTTCGAAGAA+AGG | 0.511750 | 1_2:+24101704 | Msa0063520:CDS |
| GAGAAGTTGCCTGATGATAT+GGG | 0.511921 | 1_2:+24101512 | Msa0063520:CDS |
| GTGATTAGCCGAAGTTTGAA+AGG | 0.513953 | 1_2:+24102115 | Msa0063520:CDS |
| TATGGATGGAAAGAAGGAAT+GGG | 0.514400 | 1_2:+24101593 | Msa0063520:CDS |
| AGAAAGGTGAGAGGAATGGG+AGG | 0.515891 | 1_2:+24101720 | Msa0063520:CDS |
| AGACCGTACGATGAATTCTC+AGG | 0.516592 | 1_2:-24101365 | None:intergenic |
| AATGGTAATGGCGGTGTTAG+TGG | 0.519378 | 1_2:+24102034 | Msa0063520:CDS |
| AGGGGAGGAAACAGGTTTCG+TGG | 0.526953 | 1_2:+24102068 | Msa0063520:CDS |
| ATATATCTATGGATGAGAGT+AGG | 0.527587 | 1_2:+24102197 | Msa0063520:CDS |
| GGAGTTGGGTTCGGTTGAGG+AGG | 0.528629 | 1_2:+24101907 | Msa0063520:CDS |
| AAGGGTTGAAGAGTAAGCGA+GGG | 0.530783 | 1_2:+24101984 | Msa0063520:CDS |
| GAGAGGAGAGTGAATGGTAA+TGG | 0.531889 | 1_2:+24102022 | Msa0063520:CDS |
| CCTTTCTTCGAACTCGGAGG+TGG | 0.531991 | 1_2:-24101704 | None:intergenic |
| TGTTAGTGGTAAGGAAGAGA+AGG | 0.534710 | 1_2:+24102048 | Msa0063520:CDS |
| TCGGAGTGTGAATCGGTGAT+TGG | 0.535978 | 1_2:-24101299 | None:intergenic |
| GTTGAGGTGAAGAGGAGGAC+TGG | 0.539917 | 1_2:+24101650 | Msa0063520:CDS |
| CAGGTACAAACGTGAGGGAA+TGG | 0.541500 | 1_2:-24101322 | None:intergenic |
| TGGGTTCGGTTGAGGAGGAG+AGG | 0.542166 | 1_2:+24101912 | Msa0063520:CDS |
| TTACGAGTCATATTCGCGTA+AGG | 0.542417 | 1_2:+24102092 | Msa0063520:CDS |
| GTTGAAGAGTAAGCGAGGGA+GGG | 0.542451 | 1_2:+24101988 | Msa0063520:CDS |
| GAAAGGTGAGAGGAATGGGA+GGG | 0.549583 | 1_2:+24101721 | Msa0063520:CDS |
| TAAGGTTAAAGTGGAGGATG+TGG | 0.551694 | 1_2:+24101883 | Msa0063520:CDS |
| TGTTAGGATTGTGAGAGGGA+GGG | 0.553230 | 1_2:+24101778 | Msa0063520:CDS |
| TAATGGCGGTGTTAGTGGTA+AGG | 0.555421 | 1_2:+24102039 | Msa0063520:CDS |
| AGAGTAGGGAGATTATTCAA+GGG | 0.557565 | 1_2:+24102212 | Msa0063520:CDS |
| GGGGTCGTGATGAGGAGAAA+GGG | 0.559947 | 1_2:+24101966 | Msa0063520:CDS |
| AGGGATTCGGATAAGGGGAT+TGG | 0.563325 | 1_2:+24102334 | Msa0063520:CDS |
| GTGGTAAGGAAGAGAAGGGG+AGG | 0.563710 | 1_2:+24102053 | Msa0063520:CDS |
| GAAGATTCGGGGTCGTGATG+AGG | 0.564195 | 1_2:+24101958 | Msa0063520:CDS |
| CAATGTTGAATTTGAACACA+TGG | 0.566930 | 1_2:+24102390 | Msa0063520:CDS |
| TAGTGTTGTGGGGAGAGATG+GGG | 0.568567 | 1_2:+24101817 | Msa0063520:CDS |
| GGAGGTTAAGGTTAAAGTGG+AGG | 0.568832 | 1_2:+24101877 | Msa0063520:CDS |
| GAGTTGTTAGGATTGTGAGA+GGG | 0.569203 | 1_2:+24101774 | Msa0063520:CDS |
| TGAAGATTGTTGAGGTGAAG+AGG | 0.572831 | 1_2:+24101642 | Msa0063520:CDS |
| GAGTAGGGAGATTATTCAAG+GGG | 0.572851 | 1_2:+24102213 | Msa0063520:CDS |
| GAGTGAGAGGAAGAAGAAGG+AGG | 0.574117 | 1_2:+24101748 | Msa0063520:CDS |
| GATTGGGAAGAATGCTAAGG+AGG | 0.576476 | 1_2:+24101616 | Msa0063520:CDS |
| ACTTTATTTGAAGAAAGGAG+AGG | 0.578619 | 1_2:+24102144 | Msa0063520:CDS |
| ATAAGGATGTACCGGTGGAT+GGG | 0.582128 | 1_2:+24101546 | Msa0063520:CDS |
| AGATTGTTGAGGTGAAGAGG+AGG | 0.586489 | 1_2:+24101645 | Msa0063520:CDS |
| TGATGAGTATAAGGATGTAC+CGG | 0.592878 | 1_2:+24101538 | Msa0063520:CDS |
| GTATGGATGGAAAGAAGGAA+TGG | 0.593271 | 1_2:+24101592 | Msa0063520:CDS |
| GGTTAAAGTGGAGGATGTGG+CGG | 0.594941 | 1_2:+24101886 | Msa0063520:CDS |
| TACAAACGTGAGGGAATGGT+CGG | 0.598412 | 1_2:-24101318 | None:intergenic |
| TGCCAATGCTGATGCGCCGA+GGG | 0.599963 | 1_2:+24101439 | Msa0063520:CDS |
| CCTCTCAACAAGACTTCCAA+AGG | 0.604622 | 1_2:-24102314 | None:intergenic |
| GCCGCTCCAAACCCATCCAC+CGG | 0.605334 | 1_2:-24101557 | None:intergenic |
| TTCAACATTGAGCCTCTCAT+GGG | 0.605589 | 1_2:-24102377 | None:intergenic |
| TTGAGAGGGATTCGGATAAG+GGG | 0.605890 | 1_2:+24102329 | Msa0063520:CDS |
| GTCTCAAGATATGCTCGAGA+CGG | 0.606221 | 1_2:+24102237 | Msa0063520:CDS |
| TCAACCGAAGCCTTCACCCT+CGG | 0.608786 | 1_2:-24101455 | None:intergenic |
| GGGGATTGGGAAGAATGCTA+AGG | 0.612402 | 1_2:+24101613 | Msa0063520:CDS |
| GGAATGGTCGGAGTGTGAAT+CGG | 0.619805 | 1_2:-24101306 | None:intergenic |
| GACGGCTATTCCACGACGAG+GGG | 0.622170 | 1_2:+24102255 | Msa0063520:CDS |
| TATGTTGCAGAAGTTTAAGG+AGG | 0.626509 | 1_2:+24101484 | Msa0063520:CDS |
| TGTTGTGGGGAGAGATGGGG+AGG | 0.627623 | 1_2:+24101820 | Msa0063520:CDS |
| CAACCTGAGAATTCATCGTA+CGG | 0.628541 | 1_2:+24101362 | Msa0063520:CDS |
| TTGAAGGATTTGAAGATTCG+GGG | 0.628568 | 1_2:+24101947 | Msa0063520:CDS |
| TACGAGTCATATTCGCGTAA+GGG | 0.630899 | 1_2:+24102093 | Msa0063520:CDS |
| GGAGGGTTTAGGGTTTGTGG+CGG | 0.633110 | 1_2:+24101676 | Msa0063520:CDS |
| ATGGATGGAAAGAAGGAATG+GGG | 0.634150 | 1_2:+24101594 | Msa0063520:CDS |
| ACCGGTGGATGGGTTTGGAG+CGG | 0.636308 | 1_2:+24101556 | Msa0063520:CDS |
| TGGTATCAGGTACAAACGTG+AGG | 0.636918 | 1_2:-24101328 | None:intergenic |
| TTAGTGGTAAGGAAGAGAAG+GGG | 0.638126 | 1_2:+24102050 | Msa0063520:CDS |
| TCACCTTTCTTCGAACTCGG+AGG | 0.639296 | 1_2:-24101707 | None:intergenic |
| GTTTGAAAGCTAGTGTTGTG+GGG | 0.642031 | 1_2:+24101807 | Msa0063520:CDS |
| CGAGTTCGAAGAAAGGTGAG+AGG | 0.651475 | 1_2:+24101711 | Msa0063520:CDS |
| GGAGGGATGAGGTTGACGAG+AGG | 0.652453 | 1_2:+24102005 | Msa0063520:CDS |
| AGACGGCTATTCCACGACGA+GGG | 0.652876 | 1_2:+24102254 | Msa0063520:CDS |
| TTAGCCGAAGTTTGAAAGGG+GGG | 0.655635 | 1_2:+24102119 | Msa0063520:CDS |
| CTCAGGTTGATCAGAAACTG+TGG | 0.658109 | 1_2:-24101348 | None:intergenic |
| ATTAGCCGAAGTTTGAAAGG+GGG | 0.659247 | 1_2:+24102118 | Msa0063520:CDS |
| GGAGGATGTGAAGATTGTTG+AGG | 0.659360 | 1_2:+24101634 | Msa0063520:CDS |
| TGGTTTGAAAGCTAGTGTTG+TGG | 0.665940 | 1_2:+24101805 | Msa0063520:CDS |
| ATGCCAATGCTGATGCGCCG+AGG | 0.677972 | 1_2:+24101438 | Msa0063520:CDS |
| AGGAGAGTGAATGGTAATGG+CGG | 0.680709 | 1_2:+24102025 | Msa0063520:CDS |
| GGTATCAGGTACAAACGTGA+GGG | 0.681222 | 1_2:-24101327 | None:intergenic |
| ACGGCTATTCCACGACGAGG+GGG | 0.684499 | 1_2:+24102256 | Msa0063520:CDS |
| GATTAGCCGAAGTTTGAAAG+GGG | 0.690289 | 1_2:+24102117 | Msa0063520:CDS |
| ACACATGGCTGAGTATATAG+GGG | 0.700840 | 1_2:+24102405 | Msa0063520:CDS |
| AAGATGCTGATACCCATGAG+AGG | 0.701158 | 1_2:+24102365 | Msa0063520:CDS |
| TGAGTATAAGGATGTACCGG+TGG | 0.707266 | 1_2:+24101541 | Msa0063520:CDS |
| AGAAGTTGCCTGATGATATG+GGG | 0.713896 | 1_2:+24101513 | Msa0063520:CDS |
| GAGACGGCTATTCCACGACG+AGG | 0.751516 | 1_2:+24102253 | Msa0063520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATAATGATAAGAAAAACA+AGG | + | chr1_2:24101397-24101416 | Msa0063520:CDS | 20.0% |
| !!! | TGATAATGATAAGAAAAACA+AGG | + | chr1_2:24101397-24101416 | Msa0063520:CDS | 20.0% |
| ! | ATAGATATATCACAAGTAGT+AGG | - | chr1_2:24102187-24102206 | None:intergenic | 25.0% |
| ! | TACTACTTGTGATATATCTA+TGG | + | chr1_2:24102186-24102205 | Msa0063520:CDS | 25.0% |
| ! | ATAGATATATCACAAGTAGT+AGG | - | chr1_2:24102187-24102206 | None:intergenic | 25.0% |
| ! | TACTACTTGTGATATATCTA+TGG | + | chr1_2:24102186-24102205 | Msa0063520:CDS | 25.0% |
| !!! | TTGCTTTTGTTGTTGATTTG+TGG | - | chr1_2:24101168-24101187 | None:intergenic | 30.0% |
| !!! | AATTAGGGTTTTGGGAATTA+GGG | - | chr1_2:24101225-24101244 | None:intergenic | 30.0% |
| ! | AGATTCTTCATTTTCTTGTG+GGG | - | chr1_2:24101272-24101291 | None:intergenic | 30.0% |
| ! | GAGATTCTTCATTTTCTTGT+GGG | - | chr1_2:24101273-24101292 | None:intergenic | 30.0% |
| TTCTATGTTGCAGAAGTTTA+AGG | + | chr1_2:24101481-24101500 | Msa0063520:CDS | 30.0% | |
| AGTTGAAGGATTTGAAGATT+CGG | + | chr1_2:24101945-24101964 | Msa0063520:CDS | 30.0% | |
| ! | ACTTTATTTGAAGAAAGGAG+AGG | + | chr1_2:24102144-24102163 | Msa0063520:CDS | 30.0% |
| ATATATCTATGGATGAGAGT+AGG | + | chr1_2:24102197-24102216 | Msa0063520:CDS | 30.0% | |
| TATATCTATGGATGAGAGTA+GGG | + | chr1_2:24102198-24102217 | Msa0063520:CDS | 30.0% | |
| CAATGTTGAATTTGAACACA+TGG | + | chr1_2:24102390-24102409 | Msa0063520:CDS | 30.0% | |
| !!! | TTGCTTTTGTTGTTGATTTG+TGG | - | chr1_2:24101168-24101187 | None:intergenic | 30.0% |
| !!! | AATTAGGGTTTTGGGAATTA+GGG | - | chr1_2:24101225-24101244 | None:intergenic | 30.0% |
| ! | AGATTCTTCATTTTCTTGTG+GGG | - | chr1_2:24101272-24101291 | None:intergenic | 30.0% |
| ! | GAGATTCTTCATTTTCTTGT+GGG | - | chr1_2:24101273-24101292 | None:intergenic | 30.0% |
| TTCTATGTTGCAGAAGTTTA+AGG | + | chr1_2:24101481-24101500 | Msa0063520:CDS | 30.0% | |
| AGTTGAAGGATTTGAAGATT+CGG | + | chr1_2:24101945-24101964 | Msa0063520:CDS | 30.0% | |
| ! | ACTTTATTTGAAGAAAGGAG+AGG | + | chr1_2:24102144-24102163 | Msa0063520:CDS | 30.0% |
| ATATATCTATGGATGAGAGT+AGG | + | chr1_2:24102197-24102216 | Msa0063520:CDS | 30.0% | |
| TATATCTATGGATGAGAGTA+GGG | + | chr1_2:24102198-24102217 | Msa0063520:CDS | 30.0% | |
| CAATGTTGAATTTGAACACA+TGG | + | chr1_2:24102390-24102409 | Msa0063520:CDS | 30.0% | |
| !! | TGGAGGATGATTTTGAAGAT+GGG | - | chr1_2:24101106-24101125 | None:intergenic | 35.0% |
| !! | TTGGAGGATGATTTTGAAGA+TGG | - | chr1_2:24101107-24101126 | None:intergenic | 35.0% |
| !! | TTTTGAGGGTTTGTTCGATT+TGG | - | chr1_2:24101126-24101145 | None:intergenic | 35.0% |
| ! | TCTTCGTTGAAGGTTTTTGA+GGG | - | chr1_2:24101140-24101159 | None:intergenic | 35.0% |
| ! | ATCTTCGTTGAAGGTTTTTG+AGG | - | chr1_2:24101141-24101160 | None:intergenic | 35.0% |
| !!! | GAATTAGGGTTTTGGGAATT+AGG | - | chr1_2:24101226-24101245 | None:intergenic | 35.0% |
| ! | ATTTTCGATTGGGGGAATTA+GGG | - | chr1_2:24101240-24101259 | None:intergenic | 35.0% |
| ! | CGAGATTCTTCATTTTCTTG+TGG | - | chr1_2:24101274-24101293 | None:intergenic | 35.0% |
| TATGTTGCAGAAGTTTAAGG+AGG | + | chr1_2:24101484-24101503 | Msa0063520:CDS | 35.0% | |
| TATGGGGTTTGATGAGTATA+AGG | + | chr1_2:24101529-24101548 | Msa0063520:CDS | 35.0% | |
| TGATGAGTATAAGGATGTAC+CGG | + | chr1_2:24101538-24101557 | Msa0063520:CDS | 35.0% | |
| TATGGATGGAAAGAAGGAAT+GGG | + | chr1_2:24101593-24101612 | Msa0063520:CDS | 35.0% | |
| !!! | TGTTGTTGTTTTGAGGGTTT+TGG | + | chr1_2:24101844-24101863 | Msa0063520:CDS | 35.0% |
| !!! | GTTGTTGTTTTGAGGGTTTT+GGG | + | chr1_2:24101845-24101864 | Msa0063520:CDS | 35.0% |
| !!! | TTGTTGTTTTGAGGGTTTTG+GGG | + | chr1_2:24101846-24101865 | Msa0063520:CDS | 35.0% |
| GTTGAAGGATTTGAAGATTC+GGG | + | chr1_2:24101946-24101965 | Msa0063520:CDS | 35.0% | |
| TTGAAGGATTTGAAGATTCG+GGG | + | chr1_2:24101947-24101966 | Msa0063520:CDS | 35.0% | |
| ! | TGATTAGCCGAAGTTTGAAA+GGG | + | chr1_2:24102116-24102135 | Msa0063520:CDS | 35.0% |
| ! | GGGAGACTTTATTTGAAGAA+AGG | + | chr1_2:24102139-24102158 | Msa0063520:CDS | 35.0% |
| ! | TTTGAAGAAAGGAGAGGTTT+TGG | + | chr1_2:24102150-24102169 | Msa0063520:CDS | 35.0% |
| !!! | GAGAGGTTTTGGATGTTATT+GGG | + | chr1_2:24102161-24102180 | Msa0063520:CDS | 35.0% |
| AGAGTAGGGAGATTATTCAA+GGG | + | chr1_2:24102212-24102231 | Msa0063520:CDS | 35.0% | |
| TGTATTGTCTGGTAGACATA+AGG | + | chr1_2:24102288-24102307 | Msa0063520:CDS | 35.0% | |
| GTATTGTCTGGTAGACATAA+GGG | + | chr1_2:24102289-24102308 | Msa0063520:CDS | 35.0% | |
| AACACATGGCTGAGTATATA+GGG | + | chr1_2:24102404-24102423 | Msa0063520:CDS | 35.0% | |
| !! | TGGAGGATGATTTTGAAGAT+GGG | - | chr1_2:24101106-24101125 | None:intergenic | 35.0% |
| !! | TTGGAGGATGATTTTGAAGA+TGG | - | chr1_2:24101107-24101126 | None:intergenic | 35.0% |
| !! | TTTTGAGGGTTTGTTCGATT+TGG | - | chr1_2:24101126-24101145 | None:intergenic | 35.0% |
| ! | TCTTCGTTGAAGGTTTTTGA+GGG | - | chr1_2:24101140-24101159 | None:intergenic | 35.0% |
| ! | ATCTTCGTTGAAGGTTTTTG+AGG | - | chr1_2:24101141-24101160 | None:intergenic | 35.0% |
| !!! | GAATTAGGGTTTTGGGAATT+AGG | - | chr1_2:24101226-24101245 | None:intergenic | 35.0% |
| ! | ATTTTCGATTGGGGGAATTA+GGG | - | chr1_2:24101240-24101259 | None:intergenic | 35.0% |
| ! | CGAGATTCTTCATTTTCTTG+TGG | - | chr1_2:24101274-24101293 | None:intergenic | 35.0% |
| TATGTTGCAGAAGTTTAAGG+AGG | + | chr1_2:24101484-24101503 | Msa0063520:CDS | 35.0% | |
| TATGGGGTTTGATGAGTATA+AGG | + | chr1_2:24101529-24101548 | Msa0063520:CDS | 35.0% | |
| TGATGAGTATAAGGATGTAC+CGG | + | chr1_2:24101538-24101557 | Msa0063520:CDS | 35.0% | |
| TATGGATGGAAAGAAGGAAT+GGG | + | chr1_2:24101593-24101612 | Msa0063520:CDS | 35.0% | |
| !!! | TGTTGTTGTTTTGAGGGTTT+TGG | + | chr1_2:24101844-24101863 | Msa0063520:CDS | 35.0% |
| !!! | GTTGTTGTTTTGAGGGTTTT+GGG | + | chr1_2:24101845-24101864 | Msa0063520:CDS | 35.0% |
| !!! | TTGTTGTTTTGAGGGTTTTG+GGG | + | chr1_2:24101846-24101865 | Msa0063520:CDS | 35.0% |
| GTTGAAGGATTTGAAGATTC+GGG | + | chr1_2:24101946-24101965 | Msa0063520:CDS | 35.0% | |
| TTGAAGGATTTGAAGATTCG+GGG | + | chr1_2:24101947-24101966 | Msa0063520:CDS | 35.0% | |
| ! | TGATTAGCCGAAGTTTGAAA+GGG | + | chr1_2:24102116-24102135 | Msa0063520:CDS | 35.0% |
| ! | GGGAGACTTTATTTGAAGAA+AGG | + | chr1_2:24102139-24102158 | Msa0063520:CDS | 35.0% |
| ! | TTTGAAGAAAGGAGAGGTTT+TGG | + | chr1_2:24102150-24102169 | Msa0063520:CDS | 35.0% |
| !!! | GAGAGGTTTTGGATGTTATT+GGG | + | chr1_2:24102161-24102180 | Msa0063520:CDS | 35.0% |
| AGAGTAGGGAGATTATTCAA+GGG | + | chr1_2:24102212-24102231 | Msa0063520:CDS | 35.0% | |
| TGTATTGTCTGGTAGACATA+AGG | + | chr1_2:24102288-24102307 | Msa0063520:CDS | 35.0% | |
| GTATTGTCTGGTAGACATAA+GGG | + | chr1_2:24102289-24102308 | Msa0063520:CDS | 35.0% | |
| AACACATGGCTGAGTATATA+GGG | + | chr1_2:24102404-24102423 | Msa0063520:CDS | 35.0% | |
| TGTGGAAGAATCTTCGTTGA+AGG | - | chr1_2:24101150-24101169 | None:intergenic | 40.0% | |
| GGGTTTAGAAGGATCGAATT+CGG | - | chr1_2:24101198-24101217 | None:intergenic | 40.0% | |
| ! | ATTAGGGTTTGGGGTTTAGA+AGG | - | chr1_2:24101209-24101228 | None:intergenic | 40.0% |
| !!! | GTTTTGGGAATTAGGGTTTG+GGG | - | chr1_2:24101218-24101237 | None:intergenic | 40.0% |
| !!! | GGTTTTGGGAATTAGGGTTT+GGG | - | chr1_2:24101219-24101238 | None:intergenic | 40.0% |
| ! | ATTGGGGGAATTAGGGTTTT+GGG | - | chr1_2:24101233-24101252 | None:intergenic | 40.0% |
| ! | GATTTTCGATTGGGGGAATT+AGG | - | chr1_2:24101241-24101260 | None:intergenic | 40.0% |
| TTCCCCCAATCGAAAATCAA+TGG | + | chr1_2:24101243-24101262 | Msa0063520:CDS | 40.0% | |
| !!! | ACGCCATTGATTTTCGATTG+GGG | - | chr1_2:24101249-24101268 | None:intergenic | 40.0% |
| !!! | GACGCCATTGATTTTCGATT+GGG | - | chr1_2:24101250-24101269 | None:intergenic | 40.0% |
| TGATCAGAAACTGTGGTATC+AGG | - | chr1_2:24101344-24101363 | None:intergenic | 40.0% | |
| CAACCTGAGAATTCATCGTA+CGG | + | chr1_2:24101362-24101381 | Msa0063520:CDS | 40.0% | |
| GCAGAAGTTTAAGGAGGATA+TGG | + | chr1_2:24101490-24101509 | Msa0063520:CDS | 40.0% | |
| GAGAAGTTGCCTGATGATAT+GGG | + | chr1_2:24101512-24101531 | Msa0063520:CDS | 40.0% | |
| AGAAGTTGCCTGATGATATG+GGG | + | chr1_2:24101513-24101532 | Msa0063520:CDS | 40.0% | |
| TCATCAAACCCCATATCATC+AGG | - | chr1_2:24101524-24101543 | None:intergenic | 40.0% | |
| GTATGGATGGAAAGAAGGAA+TGG | + | chr1_2:24101592-24101611 | Msa0063520:CDS | 40.0% | |
| ATGGATGGAAAGAAGGAATG+GGG | + | chr1_2:24101594-24101613 | Msa0063520:CDS | 40.0% | |
| TGAAGATTGTTGAGGTGAAG+AGG | + | chr1_2:24101642-24101661 | Msa0063520:CDS | 40.0% | |
| AGAAGGAGGATAGAGTTGTT+AGG | + | chr1_2:24101762-24101781 | Msa0063520:CDS | 40.0% | |
| AGAGTTGTTAGGATTGTGAG+AGG | + | chr1_2:24101773-24101792 | Msa0063520:CDS | 40.0% | |
| GAGTTGTTAGGATTGTGAGA+GGG | + | chr1_2:24101774-24101793 | Msa0063520:CDS | 40.0% | |
| TGGTTTGAAAGCTAGTGTTG+TGG | + | chr1_2:24101805-24101824 | Msa0063520:CDS | 40.0% | |
| GGTTTGAAAGCTAGTGTTGT+GGG | + | chr1_2:24101806-24101825 | Msa0063520:CDS | 40.0% | |
| GTTTGAAAGCTAGTGTTGTG+GGG | + | chr1_2:24101807-24101826 | Msa0063520:CDS | 40.0% | |
| !!! | GGAGGATGTTGTTGTTTTGA+GGG | + | chr1_2:24101838-24101857 | Msa0063520:CDS | 40.0% |
| TGAGGAGGTTAAGGTTAAAG+TGG | + | chr1_2:24101874-24101893 | Msa0063520:CDS | 40.0% | |
| TAAGGTTAAAGTGGAGGATG+TGG | + | chr1_2:24101883-24101902 | Msa0063520:CDS | 40.0% | |
| TGTTAGTGGTAAGGAAGAGA+AGG | + | chr1_2:24102048-24102067 | Msa0063520:CDS | 40.0% | |
| GTTAGTGGTAAGGAAGAGAA+GGG | + | chr1_2:24102049-24102068 | Msa0063520:CDS | 40.0% | |
| TTAGTGGTAAGGAAGAGAAG+GGG | + | chr1_2:24102050-24102069 | Msa0063520:CDS | 40.0% | |
| TTACGAGTCATATTCGCGTA+AGG | + | chr1_2:24102092-24102111 | Msa0063520:CDS | 40.0% | |
| TACGAGTCATATTCGCGTAA+GGG | + | chr1_2:24102093-24102112 | Msa0063520:CDS | 40.0% | |
| ! | GTGATTAGCCGAAGTTTGAA+AGG | + | chr1_2:24102115-24102134 | Msa0063520:CDS | 40.0% |
| ! | GATTAGCCGAAGTTTGAAAG+GGG | + | chr1_2:24102117-24102136 | Msa0063520:CDS | 40.0% |
| ATTAGCCGAAGTTTGAAAGG+GGG | + | chr1_2:24102118-24102137 | Msa0063520:CDS | 40.0% | |
| !!! | GGAGAGGTTTTGGATGTTAT+TGG | + | chr1_2:24102160-24102179 | Msa0063520:CDS | 40.0% |
| GAGAGTAGGGAGATTATTCA+AGG | + | chr1_2:24102211-24102230 | Msa0063520:CDS | 40.0% | |
| GAGTAGGGAGATTATTCAAG+GGG | + | chr1_2:24102213-24102232 | Msa0063520:CDS | 40.0% | |
| CTACCAGACAATACAAGAAC+AGG | - | chr1_2:24102283-24102302 | None:intergenic | 40.0% | |
| !! | CTTTGGAAGTCTTGTTGAGA+GGG | + | chr1_2:24102315-24102334 | Msa0063520:CDS | 40.0% |
| !! | AAGTCTTGTTGAGAGGGATT+CGG | + | chr1_2:24102321-24102340 | Msa0063520:CDS | 40.0% |
| TTCAACATTGAGCCTCTCAT+GGG | - | chr1_2:24102380-24102399 | None:intergenic | 40.0% | |
| ATTCAACATTGAGCCTCTCA+TGG | - | chr1_2:24102381-24102400 | None:intergenic | 40.0% | |
| GAACACATGGCTGAGTATAT+AGG | + | chr1_2:24102403-24102422 | Msa0063520:CDS | 40.0% | |
| ACACATGGCTGAGTATATAG+GGG | + | chr1_2:24102405-24102424 | Msa0063520:CDS | 40.0% | |
| TGTGGAAGAATCTTCGTTGA+AGG | - | chr1_2:24101150-24101169 | None:intergenic | 40.0% | |
| GGGTTTAGAAGGATCGAATT+CGG | - | chr1_2:24101198-24101217 | None:intergenic | 40.0% | |
| ! | ATTAGGGTTTGGGGTTTAGA+AGG | - | chr1_2:24101209-24101228 | None:intergenic | 40.0% |
| !!! | GTTTTGGGAATTAGGGTTTG+GGG | - | chr1_2:24101218-24101237 | None:intergenic | 40.0% |
| !!! | GGTTTTGGGAATTAGGGTTT+GGG | - | chr1_2:24101219-24101238 | None:intergenic | 40.0% |
| ! | ATTGGGGGAATTAGGGTTTT+GGG | - | chr1_2:24101233-24101252 | None:intergenic | 40.0% |
| ! | GATTTTCGATTGGGGGAATT+AGG | - | chr1_2:24101241-24101260 | None:intergenic | 40.0% |
| TTCCCCCAATCGAAAATCAA+TGG | + | chr1_2:24101243-24101262 | Msa0063520:CDS | 40.0% | |
| !!! | ACGCCATTGATTTTCGATTG+GGG | - | chr1_2:24101249-24101268 | None:intergenic | 40.0% |
| !!! | GACGCCATTGATTTTCGATT+GGG | - | chr1_2:24101250-24101269 | None:intergenic | 40.0% |
| TGATCAGAAACTGTGGTATC+AGG | - | chr1_2:24101344-24101363 | None:intergenic | 40.0% | |
| CAACCTGAGAATTCATCGTA+CGG | + | chr1_2:24101362-24101381 | Msa0063520:CDS | 40.0% | |
| GCAGAAGTTTAAGGAGGATA+TGG | + | chr1_2:24101490-24101509 | Msa0063520:CDS | 40.0% | |
| GAGAAGTTGCCTGATGATAT+GGG | + | chr1_2:24101512-24101531 | Msa0063520:CDS | 40.0% | |
| AGAAGTTGCCTGATGATATG+GGG | + | chr1_2:24101513-24101532 | Msa0063520:CDS | 40.0% | |
| TCATCAAACCCCATATCATC+AGG | - | chr1_2:24101524-24101543 | None:intergenic | 40.0% | |
| GTATGGATGGAAAGAAGGAA+TGG | + | chr1_2:24101592-24101611 | Msa0063520:CDS | 40.0% | |
| ATGGATGGAAAGAAGGAATG+GGG | + | chr1_2:24101594-24101613 | Msa0063520:CDS | 40.0% | |
| TGAAGATTGTTGAGGTGAAG+AGG | + | chr1_2:24101642-24101661 | Msa0063520:CDS | 40.0% | |
| AGAAGGAGGATAGAGTTGTT+AGG | + | chr1_2:24101762-24101781 | Msa0063520:CDS | 40.0% | |
| AGAGTTGTTAGGATTGTGAG+AGG | + | chr1_2:24101773-24101792 | Msa0063520:CDS | 40.0% | |
| GAGTTGTTAGGATTGTGAGA+GGG | + | chr1_2:24101774-24101793 | Msa0063520:CDS | 40.0% | |
| TGGTTTGAAAGCTAGTGTTG+TGG | + | chr1_2:24101805-24101824 | Msa0063520:CDS | 40.0% | |
| GGTTTGAAAGCTAGTGTTGT+GGG | + | chr1_2:24101806-24101825 | Msa0063520:CDS | 40.0% | |
| GTTTGAAAGCTAGTGTTGTG+GGG | + | chr1_2:24101807-24101826 | Msa0063520:CDS | 40.0% | |
| !!! | GGAGGATGTTGTTGTTTTGA+GGG | + | chr1_2:24101838-24101857 | Msa0063520:CDS | 40.0% |
| TGAGGAGGTTAAGGTTAAAG+TGG | + | chr1_2:24101874-24101893 | Msa0063520:CDS | 40.0% | |
| TAAGGTTAAAGTGGAGGATG+TGG | + | chr1_2:24101883-24101902 | Msa0063520:CDS | 40.0% | |
| TGTTAGTGGTAAGGAAGAGA+AGG | + | chr1_2:24102048-24102067 | Msa0063520:CDS | 40.0% | |
| GTTAGTGGTAAGGAAGAGAA+GGG | + | chr1_2:24102049-24102068 | Msa0063520:CDS | 40.0% | |
| TTAGTGGTAAGGAAGAGAAG+GGG | + | chr1_2:24102050-24102069 | Msa0063520:CDS | 40.0% | |
| TTACGAGTCATATTCGCGTA+AGG | + | chr1_2:24102092-24102111 | Msa0063520:CDS | 40.0% | |
| TACGAGTCATATTCGCGTAA+GGG | + | chr1_2:24102093-24102112 | Msa0063520:CDS | 40.0% | |
| ! | GTGATTAGCCGAAGTTTGAA+AGG | + | chr1_2:24102115-24102134 | Msa0063520:CDS | 40.0% |
| ! | GATTAGCCGAAGTTTGAAAG+GGG | + | chr1_2:24102117-24102136 | Msa0063520:CDS | 40.0% |
| ATTAGCCGAAGTTTGAAAGG+GGG | + | chr1_2:24102118-24102137 | Msa0063520:CDS | 40.0% | |
| !!! | GGAGAGGTTTTGGATGTTAT+TGG | + | chr1_2:24102160-24102179 | Msa0063520:CDS | 40.0% |
| GAGAGTAGGGAGATTATTCA+AGG | + | chr1_2:24102211-24102230 | Msa0063520:CDS | 40.0% | |
| GAGTAGGGAGATTATTCAAG+GGG | + | chr1_2:24102213-24102232 | Msa0063520:CDS | 40.0% | |
| CTACCAGACAATACAAGAAC+AGG | - | chr1_2:24102283-24102302 | None:intergenic | 40.0% | |
| !! | CTTTGGAAGTCTTGTTGAGA+GGG | + | chr1_2:24102315-24102334 | Msa0063520:CDS | 40.0% |
| !! | AAGTCTTGTTGAGAGGGATT+CGG | + | chr1_2:24102321-24102340 | Msa0063520:CDS | 40.0% |
| TTCAACATTGAGCCTCTCAT+GGG | - | chr1_2:24102380-24102399 | None:intergenic | 40.0% | |
| ATTCAACATTGAGCCTCTCA+TGG | - | chr1_2:24102381-24102400 | None:intergenic | 40.0% | |
| GAACACATGGCTGAGTATAT+AGG | + | chr1_2:24102403-24102422 | Msa0063520:CDS | 40.0% | |
| ACACATGGCTGAGTATATAG+GGG | + | chr1_2:24102405-24102424 | Msa0063520:CDS | 40.0% | |
| !! | TGAGGGTTTGTTCGATTTGG+AGG | - | chr1_2:24101123-24101142 | None:intergenic | 45.0% |
| !!! | GGGTTTTGGGAATTAGGGTT+TGG | - | chr1_2:24101220-24101239 | None:intergenic | 45.0% |
| ! | GATTGGGGGAATTAGGGTTT+TGG | - | chr1_2:24101234-24101253 | None:intergenic | 45.0% |
| !!! | CGCCATTGATTTTCGATTGG+GGG | - | chr1_2:24101248-24101267 | None:intergenic | 45.0% |
| !!! | GGACGCCATTGATTTTCGAT+TGG | - | chr1_2:24101251-24101270 | None:intergenic | 45.0% |
| TACAAACGTGAGGGAATGGT+CGG | - | chr1_2:24101321-24101340 | None:intergenic | 45.0% | |
| GGTATCAGGTACAAACGTGA+GGG | - | chr1_2:24101330-24101349 | None:intergenic | 45.0% | |
| TGGTATCAGGTACAAACGTG+AGG | - | chr1_2:24101331-24101350 | None:intergenic | 45.0% | |
| !! | CTCAGGTTGATCAGAAACTG+TGG | - | chr1_2:24101351-24101370 | None:intergenic | 45.0% |
| AGACCGTACGATGAATTCTC+AGG | - | chr1_2:24101368-24101387 | None:intergenic | 45.0% | |
| GGAGAAGTTGCCTGATGATA+TGG | + | chr1_2:24101511-24101530 | Msa0063520:CDS | 45.0% | |
| TGAGTATAAGGATGTACCGG+TGG | + | chr1_2:24101541-24101560 | Msa0063520:CDS | 45.0% | |
| ! | TATAAGGATGTACCGGTGGA+TGG | + | chr1_2:24101545-24101564 | Msa0063520:CDS | 45.0% |
| ! | ATAAGGATGTACCGGTGGAT+GGG | + | chr1_2:24101546-24101565 | Msa0063520:CDS | 45.0% |
| TGGAAAGAAGGAATGGGGAT+TGG | + | chr1_2:24101599-24101618 | Msa0063520:CDS | 45.0% | |
| GGAAAGAAGGAATGGGGATT+GGG | + | chr1_2:24101600-24101619 | Msa0063520:CDS | 45.0% | |
| GATTGGGAAGAATGCTAAGG+AGG | + | chr1_2:24101616-24101635 | Msa0063520:CDS | 45.0% | |
| GGAGGATGTGAAGATTGTTG+AGG | + | chr1_2:24101634-24101653 | Msa0063520:CDS | 45.0% | |
| AGATTGTTGAGGTGAAGAGG+AGG | + | chr1_2:24101645-24101664 | Msa0063520:CDS | 45.0% | |
| ! | TAAGGAGGGTTTAGGGTTTG+TGG | + | chr1_2:24101673-24101692 | Msa0063520:CDS | 45.0% |
| CTCTCACCTTTCTTCGAACT+CGG | - | chr1_2:24101713-24101732 | None:intergenic | 45.0% | |
| TCGAAGAAAGGTGAGAGGAA+TGG | + | chr1_2:24101716-24101735 | Msa0063520:CDS | 45.0% | |
| CGAAGAAAGGTGAGAGGAAT+GGG | + | chr1_2:24101717-24101736 | Msa0063520:CDS | 45.0% | |
| TTGTTAGGATTGTGAGAGGG+AGG | + | chr1_2:24101777-24101796 | Msa0063520:CDS | 45.0% | |
| TGTTAGGATTGTGAGAGGGA+GGG | + | chr1_2:24101778-24101797 | Msa0063520:CDS | 45.0% | |
| !!! | GGGAGGATGTTGTTGTTTTG+AGG | + | chr1_2:24101837-24101856 | Msa0063520:CDS | 45.0% |
| GGAGGTTAAGGTTAAAGTGG+AGG | + | chr1_2:24101877-24101896 | Msa0063520:CDS | 45.0% | |
| ! | GAGGTGTTTGAGGAAGTTGA+AGG | + | chr1_2:24101931-24101950 | Msa0063520:CDS | 45.0% |
| AAAGGGTTGAAGAGTAAGCG+AGG | + | chr1_2:24101983-24102002 | Msa0063520:CDS | 45.0% | |
| AAGGGTTGAAGAGTAAGCGA+GGG | + | chr1_2:24101984-24102003 | Msa0063520:CDS | 45.0% | |
| GAGAGGAGAGTGAATGGTAA+TGG | + | chr1_2:24102022-24102041 | Msa0063520:CDS | 45.0% | |
| !! | AGGAGAGTGAATGGTAATGG+CGG | + | chr1_2:24102025-24102044 | Msa0063520:CDS | 45.0% |
| !! | AATGGTAATGGCGGTGTTAG+TGG | + | chr1_2:24102034-24102053 | Msa0063520:CDS | 45.0% |
| ! | TAATGGCGGTGTTAGTGGTA+AGG | + | chr1_2:24102039-24102058 | Msa0063520:CDS | 45.0% |
| TTAGCCGAAGTTTGAAAGGG+GGG | + | chr1_2:24102119-24102138 | Msa0063520:CDS | 45.0% | |
| GTCTCAAGATATGCTCGAGA+CGG | + | chr1_2:24102237-24102256 | Msa0063520:CDS | 45.0% | |
| GGACCTGTTCTTGTATTGTC+TGG | + | chr1_2:24102277-24102296 | Msa0063520:CDS | 45.0% | |
| CCTCTCAACAAGACTTCCAA+AGG | - | chr1_2:24102317-24102336 | None:intergenic | 45.0% | |
| !! | CCTTTGGAAGTCTTGTTGAG+AGG | + | chr1_2:24102314-24102333 | Msa0063520:CDS | 45.0% |
| TGTTGAGAGGGATTCGGATA+AGG | + | chr1_2:24102327-24102346 | Msa0063520:CDS | 45.0% | |
| GTTGAGAGGGATTCGGATAA+GGG | + | chr1_2:24102328-24102347 | Msa0063520:CDS | 45.0% | |
| TTGAGAGGGATTCGGATAAG+GGG | + | chr1_2:24102329-24102348 | Msa0063520:CDS | 45.0% | |
| AAGATGCTGATACCCATGAG+AGG | + | chr1_2:24102365-24102384 | Msa0063520:CDS | 45.0% | |
| !! | TGAGGGTTTGTTCGATTTGG+AGG | - | chr1_2:24101123-24101142 | None:intergenic | 45.0% |
| !!! | GGGTTTTGGGAATTAGGGTT+TGG | - | chr1_2:24101220-24101239 | None:intergenic | 45.0% |
| ! | GATTGGGGGAATTAGGGTTT+TGG | - | chr1_2:24101234-24101253 | None:intergenic | 45.0% |
| !!! | CGCCATTGATTTTCGATTGG+GGG | - | chr1_2:24101248-24101267 | None:intergenic | 45.0% |
| !!! | GGACGCCATTGATTTTCGAT+TGG | - | chr1_2:24101251-24101270 | None:intergenic | 45.0% |
| TACAAACGTGAGGGAATGGT+CGG | - | chr1_2:24101321-24101340 | None:intergenic | 45.0% | |
| GGTATCAGGTACAAACGTGA+GGG | - | chr1_2:24101330-24101349 | None:intergenic | 45.0% | |
| TGGTATCAGGTACAAACGTG+AGG | - | chr1_2:24101331-24101350 | None:intergenic | 45.0% | |
| !! | CTCAGGTTGATCAGAAACTG+TGG | - | chr1_2:24101351-24101370 | None:intergenic | 45.0% |
| AGACCGTACGATGAATTCTC+AGG | - | chr1_2:24101368-24101387 | None:intergenic | 45.0% | |
| GGAGAAGTTGCCTGATGATA+TGG | + | chr1_2:24101511-24101530 | Msa0063520:CDS | 45.0% | |
| TGAGTATAAGGATGTACCGG+TGG | + | chr1_2:24101541-24101560 | Msa0063520:CDS | 45.0% | |
| ! | TATAAGGATGTACCGGTGGA+TGG | + | chr1_2:24101545-24101564 | Msa0063520:CDS | 45.0% |
| ! | ATAAGGATGTACCGGTGGAT+GGG | + | chr1_2:24101546-24101565 | Msa0063520:CDS | 45.0% |
| TGGAAAGAAGGAATGGGGAT+TGG | + | chr1_2:24101599-24101618 | Msa0063520:CDS | 45.0% | |
| GGAAAGAAGGAATGGGGATT+GGG | + | chr1_2:24101600-24101619 | Msa0063520:CDS | 45.0% | |
| GATTGGGAAGAATGCTAAGG+AGG | + | chr1_2:24101616-24101635 | Msa0063520:CDS | 45.0% | |
| GGAGGATGTGAAGATTGTTG+AGG | + | chr1_2:24101634-24101653 | Msa0063520:CDS | 45.0% | |
| AGATTGTTGAGGTGAAGAGG+AGG | + | chr1_2:24101645-24101664 | Msa0063520:CDS | 45.0% | |
| ! | TAAGGAGGGTTTAGGGTTTG+TGG | + | chr1_2:24101673-24101692 | Msa0063520:CDS | 45.0% |
| CTCTCACCTTTCTTCGAACT+CGG | - | chr1_2:24101713-24101732 | None:intergenic | 45.0% | |
| TCGAAGAAAGGTGAGAGGAA+TGG | + | chr1_2:24101716-24101735 | Msa0063520:CDS | 45.0% | |
| CGAAGAAAGGTGAGAGGAAT+GGG | + | chr1_2:24101717-24101736 | Msa0063520:CDS | 45.0% | |
| TTGTTAGGATTGTGAGAGGG+AGG | + | chr1_2:24101777-24101796 | Msa0063520:CDS | 45.0% | |
| TGTTAGGATTGTGAGAGGGA+GGG | + | chr1_2:24101778-24101797 | Msa0063520:CDS | 45.0% | |
| !!! | GGGAGGATGTTGTTGTTTTG+AGG | + | chr1_2:24101837-24101856 | Msa0063520:CDS | 45.0% |
| GGAGGTTAAGGTTAAAGTGG+AGG | + | chr1_2:24101877-24101896 | Msa0063520:CDS | 45.0% | |
| ! | GAGGTGTTTGAGGAAGTTGA+AGG | + | chr1_2:24101931-24101950 | Msa0063520:CDS | 45.0% |
| AAAGGGTTGAAGAGTAAGCG+AGG | + | chr1_2:24101983-24102002 | Msa0063520:CDS | 45.0% | |
| AAGGGTTGAAGAGTAAGCGA+GGG | + | chr1_2:24101984-24102003 | Msa0063520:CDS | 45.0% | |
| GAGAGGAGAGTGAATGGTAA+TGG | + | chr1_2:24102022-24102041 | Msa0063520:CDS | 45.0% | |
| !! | AGGAGAGTGAATGGTAATGG+CGG | + | chr1_2:24102025-24102044 | Msa0063520:CDS | 45.0% |
| !! | AATGGTAATGGCGGTGTTAG+TGG | + | chr1_2:24102034-24102053 | Msa0063520:CDS | 45.0% |
| ! | TAATGGCGGTGTTAGTGGTA+AGG | + | chr1_2:24102039-24102058 | Msa0063520:CDS | 45.0% |
| TTAGCCGAAGTTTGAAAGGG+GGG | + | chr1_2:24102119-24102138 | Msa0063520:CDS | 45.0% | |
| GTCTCAAGATATGCTCGAGA+CGG | + | chr1_2:24102237-24102256 | Msa0063520:CDS | 45.0% | |
| GGACCTGTTCTTGTATTGTC+TGG | + | chr1_2:24102277-24102296 | Msa0063520:CDS | 45.0% | |
| CCTCTCAACAAGACTTCCAA+AGG | - | chr1_2:24102317-24102336 | None:intergenic | 45.0% | |
| !! | CCTTTGGAAGTCTTGTTGAG+AGG | + | chr1_2:24102314-24102333 | Msa0063520:CDS | 45.0% |
| TGTTGAGAGGGATTCGGATA+AGG | + | chr1_2:24102327-24102346 | Msa0063520:CDS | 45.0% | |
| GTTGAGAGGGATTCGGATAA+GGG | + | chr1_2:24102328-24102347 | Msa0063520:CDS | 45.0% | |
| TTGAGAGGGATTCGGATAAG+GGG | + | chr1_2:24102329-24102348 | Msa0063520:CDS | 45.0% | |
| AAGATGCTGATACCCATGAG+AGG | + | chr1_2:24102365-24102384 | Msa0063520:CDS | 45.0% | |
| TCGGAGTGTGAATCGGTGAT+TGG | - | chr1_2:24101302-24101321 | None:intergenic | 50.0% | |
| GGAATGGTCGGAGTGTGAAT+CGG | - | chr1_2:24101309-24101328 | None:intergenic | 50.0% | |
| CAGGTACAAACGTGAGGGAA+TGG | - | chr1_2:24101325-24101344 | None:intergenic | 50.0% | |
| GGTGGGTATGGATGGAAAGA+AGG | + | chr1_2:24101587-24101606 | Msa0063520:CDS | 50.0% | |
| GGGGATTGGGAAGAATGCTA+AGG | + | chr1_2:24101613-24101632 | Msa0063520:CDS | 50.0% | |
| ! | AAGAGGAGGACTGGTAAGGA+GGG | + | chr1_2:24101659-24101678 | Msa0063520:CDS | 50.0% |
| ! | AGGACTGGTAAGGAGGGTTT+AGG | + | chr1_2:24101665-24101684 | Msa0063520:CDS | 50.0% |
| ! | GGACTGGTAAGGAGGGTTTA+GGG | + | chr1_2:24101666-24101685 | Msa0063520:CDS | 50.0% |
| TCACCTTTCTTCGAACTCGG+AGG | - | chr1_2:24101710-24101729 | None:intergenic | 50.0% | |
| CGAGTTCGAAGAAAGGTGAG+AGG | + | chr1_2:24101711-24101730 | Msa0063520:CDS | 50.0% | |
| AGAAAGGTGAGAGGAATGGG+AGG | + | chr1_2:24101720-24101739 | Msa0063520:CDS | 50.0% | |
| GAAAGGTGAGAGGAATGGGA+GGG | + | chr1_2:24101721-24101740 | Msa0063520:CDS | 50.0% | |
| AAAGGTGAGAGGAATGGGAG+GGG | + | chr1_2:24101722-24101741 | Msa0063520:CDS | 50.0% | |
| GGAGAGTGAGAGGAAGAAGA+AGG | + | chr1_2:24101745-24101764 | Msa0063520:CDS | 50.0% | |
| GAGTGAGAGGAAGAAGAAGG+AGG | + | chr1_2:24101748-24101767 | Msa0063520:CDS | 50.0% | |
| ATTGTGAGAGGGAGGGATGT+TGG | + | chr1_2:24101785-24101804 | Msa0063520:CDS | 50.0% | |
| CTAGTGTTGTGGGGAGAGAT+GGG | + | chr1_2:24101816-24101835 | Msa0063520:CDS | 50.0% | |
| TAGTGTTGTGGGGAGAGATG+GGG | + | chr1_2:24101817-24101836 | Msa0063520:CDS | 50.0% | |
| !!! | GTTTTGAGGGTTTTGGGGAG+TGG | + | chr1_2:24101851-24101870 | Msa0063520:CDS | 50.0% |
| GGTTAAAGTGGAGGATGTGG+CGG | + | chr1_2:24101886-24101905 | Msa0063520:CDS | 50.0% | |
| !! | TTGAGGAGGAGAGGTGTTTG+AGG | + | chr1_2:24101921-24101940 | Msa0063520:CDS | 50.0% |
| GTTGAAGAGTAAGCGAGGGA+GGG | + | chr1_2:24101988-24102007 | Msa0063520:CDS | 50.0% | |
| GTTGACGAGAGGAGAGTGAA+TGG | + | chr1_2:24102016-24102035 | Msa0063520:CDS | 50.0% | |
| GTCTCCCCCCTTTCAAACTT+CGG | - | chr1_2:24102126-24102145 | None:intergenic | 50.0% | |
| !! | GGTAGACATAAGGGTGCCTT+TGG | + | chr1_2:24102298-24102317 | Msa0063520:CDS | 50.0% |
| AGGGATTCGGATAAGGGGAT+TGG | + | chr1_2:24102334-24102353 | Msa0063520:CDS | 50.0% | |
| TATAGGGGACCCAAGCTTAC+TGG | + | chr1_2:24102420-24102439 | Msa0063520:CDS | 50.0% | |
| ATAGGGGACCCAAGCTTACT+GGG | + | chr1_2:24102421-24102440 | Msa0063520:CDS | 50.0% | |
| TCGGAGTGTGAATCGGTGAT+TGG | - | chr1_2:24101302-24101321 | None:intergenic | 50.0% | |
| GGAATGGTCGGAGTGTGAAT+CGG | - | chr1_2:24101309-24101328 | None:intergenic | 50.0% | |
| CAGGTACAAACGTGAGGGAA+TGG | - | chr1_2:24101325-24101344 | None:intergenic | 50.0% | |
| GGTGGGTATGGATGGAAAGA+AGG | + | chr1_2:24101587-24101606 | Msa0063520:CDS | 50.0% | |
| GGGGATTGGGAAGAATGCTA+AGG | + | chr1_2:24101613-24101632 | Msa0063520:CDS | 50.0% | |
| ! | AAGAGGAGGACTGGTAAGGA+GGG | + | chr1_2:24101659-24101678 | Msa0063520:CDS | 50.0% |
| ! | AGGACTGGTAAGGAGGGTTT+AGG | + | chr1_2:24101665-24101684 | Msa0063520:CDS | 50.0% |
| ! | GGACTGGTAAGGAGGGTTTA+GGG | + | chr1_2:24101666-24101685 | Msa0063520:CDS | 50.0% |
| TCACCTTTCTTCGAACTCGG+AGG | - | chr1_2:24101710-24101729 | None:intergenic | 50.0% | |
| CGAGTTCGAAGAAAGGTGAG+AGG | + | chr1_2:24101711-24101730 | Msa0063520:CDS | 50.0% | |
| AGAAAGGTGAGAGGAATGGG+AGG | + | chr1_2:24101720-24101739 | Msa0063520:CDS | 50.0% | |
| GAAAGGTGAGAGGAATGGGA+GGG | + | chr1_2:24101721-24101740 | Msa0063520:CDS | 50.0% | |
| AAAGGTGAGAGGAATGGGAG+GGG | + | chr1_2:24101722-24101741 | Msa0063520:CDS | 50.0% | |
| GGAGAGTGAGAGGAAGAAGA+AGG | + | chr1_2:24101745-24101764 | Msa0063520:CDS | 50.0% | |
| GAGTGAGAGGAAGAAGAAGG+AGG | + | chr1_2:24101748-24101767 | Msa0063520:CDS | 50.0% | |
| ATTGTGAGAGGGAGGGATGT+TGG | + | chr1_2:24101785-24101804 | Msa0063520:CDS | 50.0% | |
| CTAGTGTTGTGGGGAGAGAT+GGG | + | chr1_2:24101816-24101835 | Msa0063520:CDS | 50.0% | |
| TAGTGTTGTGGGGAGAGATG+GGG | + | chr1_2:24101817-24101836 | Msa0063520:CDS | 50.0% | |
| !!! | GTTTTGAGGGTTTTGGGGAG+TGG | + | chr1_2:24101851-24101870 | Msa0063520:CDS | 50.0% |
| GGTTAAAGTGGAGGATGTGG+CGG | + | chr1_2:24101886-24101905 | Msa0063520:CDS | 50.0% | |
| !! | TTGAGGAGGAGAGGTGTTTG+AGG | + | chr1_2:24101921-24101940 | Msa0063520:CDS | 50.0% |
| GTTGAAGAGTAAGCGAGGGA+GGG | + | chr1_2:24101988-24102007 | Msa0063520:CDS | 50.0% | |
| GTTGACGAGAGGAGAGTGAA+TGG | + | chr1_2:24102016-24102035 | Msa0063520:CDS | 50.0% | |
| GTCTCCCCCCTTTCAAACTT+CGG | - | chr1_2:24102126-24102145 | None:intergenic | 50.0% | |
| !! | GGTAGACATAAGGGTGCCTT+TGG | + | chr1_2:24102298-24102317 | Msa0063520:CDS | 50.0% |
| AGGGATTCGGATAAGGGGAT+TGG | + | chr1_2:24102334-24102353 | Msa0063520:CDS | 50.0% | |
| TATAGGGGACCCAAGCTTAC+TGG | + | chr1_2:24102420-24102439 | Msa0063520:CDS | 50.0% | |
| ATAGGGGACCCAAGCTTACT+GGG | + | chr1_2:24102421-24102440 | Msa0063520:CDS | 50.0% | |
| TCAACCGAAGCCTTCACCCT+CGG | - | chr1_2:24101458-24101477 | None:intergenic | 55.0% | |
| ! | GATGTACCGGTGGATGGGTT+TGG | + | chr1_2:24101551-24101570 | Msa0063520:CDS | 55.0% |
| ! | CGTTGCTTGGTGGGTATGGA+TGG | + | chr1_2:24101579-24101598 | Msa0063520:CDS | 55.0% |
| GTTGAGGTGAAGAGGAGGAC+TGG | + | chr1_2:24101650-24101669 | Msa0063520:CDS | 55.0% | |
| ! | GGTGAAGAGGAGGACTGGTA+AGG | + | chr1_2:24101655-24101674 | Msa0063520:CDS | 55.0% |
| ! | GAAGAGGAGGACTGGTAAGG+AGG | + | chr1_2:24101658-24101677 | Msa0063520:CDS | 55.0% |
| ! | GGAGGGTTTAGGGTTTGTGG+CGG | + | chr1_2:24101676-24101695 | Msa0063520:CDS | 55.0% |
| CCTTTCTTCGAACTCGGAGG+TGG | - | chr1_2:24101707-24101726 | None:intergenic | 55.0% | |
| CCACCTCCGAGTTCGAAGAA+AGG | + | chr1_2:24101704-24101723 | Msa0063520:CDS | 55.0% | |
| AAGGTGAGAGGAATGGGAGG+GGG | + | chr1_2:24101723-24101742 | Msa0063520:CDS | 55.0% | |
| GCTAGTGTTGTGGGGAGAGA+TGG | + | chr1_2:24101815-24101834 | Msa0063520:CDS | 55.0% | |
| GAAGATTCGGGGTCGTGATG+AGG | + | chr1_2:24101958-24101977 | Msa0063520:CDS | 55.0% | |
| GGGGTCGTGATGAGGAGAAA+GGG | + | chr1_2:24101966-24101985 | Msa0063520:CDS | 55.0% | |
| GGTTGAAGAGTAAGCGAGGG+AGG | + | chr1_2:24101987-24102006 | Msa0063520:CDS | 55.0% | |
| GTGGTAAGGAAGAGAAGGGG+AGG | + | chr1_2:24102053-24102072 | Msa0063520:CDS | 55.0% | |
| GGAAGAGAAGGGGAGGAAAC+AGG | + | chr1_2:24102060-24102079 | Msa0063520:CDS | 55.0% | |
| AGGGGAGGAAACAGGTTTCG+TGG | + | chr1_2:24102068-24102087 | Msa0063520:CDS | 55.0% | |
| AGACGGCTATTCCACGACGA+GGG | + | chr1_2:24102254-24102273 | Msa0063520:CDS | 55.0% | |
| TCAACCGAAGCCTTCACCCT+CGG | - | chr1_2:24101458-24101477 | None:intergenic | 55.0% | |
| ! | GATGTACCGGTGGATGGGTT+TGG | + | chr1_2:24101551-24101570 | Msa0063520:CDS | 55.0% |
| ! | CGTTGCTTGGTGGGTATGGA+TGG | + | chr1_2:24101579-24101598 | Msa0063520:CDS | 55.0% |
| GTTGAGGTGAAGAGGAGGAC+TGG | + | chr1_2:24101650-24101669 | Msa0063520:CDS | 55.0% | |
| ! | GGTGAAGAGGAGGACTGGTA+AGG | + | chr1_2:24101655-24101674 | Msa0063520:CDS | 55.0% |
| ! | GAAGAGGAGGACTGGTAAGG+AGG | + | chr1_2:24101658-24101677 | Msa0063520:CDS | 55.0% |
| ! | GGAGGGTTTAGGGTTTGTGG+CGG | + | chr1_2:24101676-24101695 | Msa0063520:CDS | 55.0% |
| CCTTTCTTCGAACTCGGAGG+TGG | - | chr1_2:24101707-24101726 | None:intergenic | 55.0% | |
| CCACCTCCGAGTTCGAAGAA+AGG | + | chr1_2:24101704-24101723 | Msa0063520:CDS | 55.0% | |
| AAGGTGAGAGGAATGGGAGG+GGG | + | chr1_2:24101723-24101742 | Msa0063520:CDS | 55.0% | |
| GCTAGTGTTGTGGGGAGAGA+TGG | + | chr1_2:24101815-24101834 | Msa0063520:CDS | 55.0% | |
| GAAGATTCGGGGTCGTGATG+AGG | + | chr1_2:24101958-24101977 | Msa0063520:CDS | 55.0% | |
| GGGGTCGTGATGAGGAGAAA+GGG | + | chr1_2:24101966-24101985 | Msa0063520:CDS | 55.0% | |
| GGTTGAAGAGTAAGCGAGGG+AGG | + | chr1_2:24101987-24102006 | Msa0063520:CDS | 55.0% | |
| GTGGTAAGGAAGAGAAGGGG+AGG | + | chr1_2:24102053-24102072 | Msa0063520:CDS | 55.0% | |
| GGAAGAGAAGGGGAGGAAAC+AGG | + | chr1_2:24102060-24102079 | Msa0063520:CDS | 55.0% | |
| AGGGGAGGAAACAGGTTTCG+TGG | + | chr1_2:24102068-24102087 | Msa0063520:CDS | 55.0% | |
| AGACGGCTATTCCACGACGA+GGG | + | chr1_2:24102254-24102273 | Msa0063520:CDS | 55.0% | |
| ATGCCAATGCTGATGCGCCG+AGG | + | chr1_2:24101438-24101457 | Msa0063520:CDS | 60.0% | |
| TGCCAATGCTGATGCGCCGA+GGG | + | chr1_2:24101439-24101458 | Msa0063520:CDS | 60.0% | |
| GAGGGTGAAGGCTTCGGTTG+AGG | + | chr1_2:24101457-24101476 | Msa0063520:CDS | 60.0% | |
| ! | ACCGGTGGATGGGTTTGGAG+CGG | + | chr1_2:24101556-24101575 | Msa0063520:CDS | 60.0% |
| ! | TTTGGAGCGGCGTTGCTTGG+TGG | + | chr1_2:24101569-24101588 | Msa0063520:CDS | 60.0% |
| TTGGAGCGGCGTTGCTTGGT+GGG | + | chr1_2:24101570-24101589 | Msa0063520:CDS | 60.0% | |
| AGGTGAGAGGAATGGGAGGG+GGG | + | chr1_2:24101724-24101743 | Msa0063520:CDS | 60.0% | |
| TGTTGTGGGGAGAGATGGGG+AGG | + | chr1_2:24101820-24101839 | Msa0063520:CDS | 60.0% | |
| !!! | GAGGGTTTTGGGGAGTGGTG+AGG | + | chr1_2:24101856-24101875 | Msa0063520:CDS | 60.0% |
| !!! | GGTTTTGGGGAGTGGTGAGG+AGG | + | chr1_2:24101859-24101878 | Msa0063520:CDS | 60.0% |
| GGGGAGTGGTGAGGAGGTTA+AGG | + | chr1_2:24101865-24101884 | Msa0063520:CDS | 60.0% | |
| ! | AGTGGAGGATGTGGCGGAGT+TGG | + | chr1_2:24101892-24101911 | Msa0063520:CDS | 60.0% |
| ! | GTGGAGGATGTGGCGGAGTT+GGG | + | chr1_2:24101893-24101912 | Msa0063520:CDS | 60.0% |
| ! | GGATGTGGCGGAGTTGGGTT+CGG | + | chr1_2:24101898-24101917 | Msa0063520:CDS | 60.0% |
| ! | GGAGTTGGGTTCGGTTGAGG+AGG | + | chr1_2:24101907-24101926 | Msa0063520:CDS | 60.0% |
| ! | TGGGTTCGGTTGAGGAGGAG+AGG | + | chr1_2:24101912-24101931 | Msa0063520:CDS | 60.0% |
| CGGGGTCGTGATGAGGAGAA+AGG | + | chr1_2:24101965-24101984 | Msa0063520:CDS | 60.0% | |
| GAGTAAGCGAGGGAGGGATG+AGG | + | chr1_2:24101994-24102013 | Msa0063520:CDS | 60.0% | |
| GGAGGGATGAGGTTGACGAG+AGG | + | chr1_2:24102005-24102024 | Msa0063520:CDS | 60.0% | |
| GAGACGGCTATTCCACGACG+AGG | + | chr1_2:24102253-24102272 | Msa0063520:CDS | 60.0% | |
| GACGGCTATTCCACGACGAG+GGG | + | chr1_2:24102255-24102274 | Msa0063520:CDS | 60.0% | |
| ACGGCTATTCCACGACGAGG+GGG | + | chr1_2:24102256-24102275 | Msa0063520:CDS | 60.0% | |
| ATGCCAATGCTGATGCGCCG+AGG | + | chr1_2:24101438-24101457 | Msa0063520:CDS | 60.0% | |
| TGCCAATGCTGATGCGCCGA+GGG | + | chr1_2:24101439-24101458 | Msa0063520:CDS | 60.0% | |
| GAGGGTGAAGGCTTCGGTTG+AGG | + | chr1_2:24101457-24101476 | Msa0063520:CDS | 60.0% | |
| ! | ACCGGTGGATGGGTTTGGAG+CGG | + | chr1_2:24101556-24101575 | Msa0063520:CDS | 60.0% |
| ! | TTTGGAGCGGCGTTGCTTGG+TGG | + | chr1_2:24101569-24101588 | Msa0063520:CDS | 60.0% |
| TTGGAGCGGCGTTGCTTGGT+GGG | + | chr1_2:24101570-24101589 | Msa0063520:CDS | 60.0% | |
| AGGTGAGAGGAATGGGAGGG+GGG | + | chr1_2:24101724-24101743 | Msa0063520:CDS | 60.0% | |
| TGTTGTGGGGAGAGATGGGG+AGG | + | chr1_2:24101820-24101839 | Msa0063520:CDS | 60.0% | |
| !!! | GAGGGTTTTGGGGAGTGGTG+AGG | + | chr1_2:24101856-24101875 | Msa0063520:CDS | 60.0% |
| !!! | GGTTTTGGGGAGTGGTGAGG+AGG | + | chr1_2:24101859-24101878 | Msa0063520:CDS | 60.0% |
| GGGGAGTGGTGAGGAGGTTA+AGG | + | chr1_2:24101865-24101884 | Msa0063520:CDS | 60.0% | |
| ! | AGTGGAGGATGTGGCGGAGT+TGG | + | chr1_2:24101892-24101911 | Msa0063520:CDS | 60.0% |
| ! | GTGGAGGATGTGGCGGAGTT+GGG | + | chr1_2:24101893-24101912 | Msa0063520:CDS | 60.0% |
| ! | GGATGTGGCGGAGTTGGGTT+CGG | + | chr1_2:24101898-24101917 | Msa0063520:CDS | 60.0% |
| ! | GGAGTTGGGTTCGGTTGAGG+AGG | + | chr1_2:24101907-24101926 | Msa0063520:CDS | 60.0% |
| ! | TGGGTTCGGTTGAGGAGGAG+AGG | + | chr1_2:24101912-24101931 | Msa0063520:CDS | 60.0% |
| CGGGGTCGTGATGAGGAGAA+AGG | + | chr1_2:24101965-24101984 | Msa0063520:CDS | 60.0% | |
| GAGTAAGCGAGGGAGGGATG+AGG | + | chr1_2:24101994-24102013 | Msa0063520:CDS | 60.0% | |
| GGAGGGATGAGGTTGACGAG+AGG | + | chr1_2:24102005-24102024 | Msa0063520:CDS | 60.0% | |
| GAGACGGCTATTCCACGACG+AGG | + | chr1_2:24102253-24102272 | Msa0063520:CDS | 60.0% | |
| GACGGCTATTCCACGACGAG+GGG | + | chr1_2:24102255-24102274 | Msa0063520:CDS | 60.0% | |
| ACGGCTATTCCACGACGAGG+GGG | + | chr1_2:24102256-24102275 | Msa0063520:CDS | 60.0% | |
| CACCCTCGGCGCATCAGCAT+TGG | - | chr1_2:24101444-24101463 | None:intergenic | 65.0% | |
| TGCTGATGCGCCGAGGGTGA+AGG | + | chr1_2:24101445-24101464 | Msa0063520:CDS | 65.0% | |
| TGCGCCGAGGGTGAAGGCTT+CGG | + | chr1_2:24101451-24101470 | Msa0063520:CDS | 65.0% | |
| GCCGCTCCAAACCCATCCAC+CGG | - | chr1_2:24101560-24101579 | None:intergenic | 65.0% | |
| ! | GGGTTTGGAGCGGCGTTGCT+TGG | + | chr1_2:24101566-24101585 | Msa0063520:CDS | 65.0% |
| ! | GCGGCGTTGCTTGGTGGGTA+TGG | + | chr1_2:24101575-24101594 | Msa0063520:CDS | 65.0% |
| ATGGGAGGGGGGAGAGTGAG+AGG | + | chr1_2:24101735-24101754 | Msa0063520:CDS | 65.0% | |
| ! | GGCGGAGTTGGGTTCGGTTG+AGG | + | chr1_2:24101904-24101923 | Msa0063520:CDS | 65.0% |
| AGAACAGGTCCCCCTCGTCG+TGG | - | chr1_2:24102268-24102287 | None:intergenic | 65.0% | |
| CACCCTCGGCGCATCAGCAT+TGG | - | chr1_2:24101444-24101463 | None:intergenic | 65.0% | |
| TGCTGATGCGCCGAGGGTGA+AGG | + | chr1_2:24101445-24101464 | Msa0063520:CDS | 65.0% | |
| TGCGCCGAGGGTGAAGGCTT+CGG | + | chr1_2:24101451-24101470 | Msa0063520:CDS | 65.0% | |
| GCCGCTCCAAACCCATCCAC+CGG | - | chr1_2:24101560-24101579 | None:intergenic | 65.0% | |
| ! | GGGTTTGGAGCGGCGTTGCT+TGG | + | chr1_2:24101566-24101585 | Msa0063520:CDS | 65.0% |
| ! | GCGGCGTTGCTTGGTGGGTA+TGG | + | chr1_2:24101575-24101594 | Msa0063520:CDS | 65.0% |
| ATGGGAGGGGGGAGAGTGAG+AGG | + | chr1_2:24101735-24101754 | Msa0063520:CDS | 65.0% | |
| ! | GGCGGAGTTGGGTTCGGTTG+AGG | + | chr1_2:24101904-24101923 | Msa0063520:CDS | 65.0% |
| AGAACAGGTCCCCCTCGTCG+TGG | - | chr1_2:24102268-24102287 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 24101077 | 24102450 | 24101077 | ID=Msa0063520;Name=Msa0063520 |
| chr1_2 | mRNA | 24101077 | 24102450 | 24101077 | ID=Msa0063520-mRNA-1;Parent=Msa0063520;Name=Msa0063520-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|-1|0|1|-1|1|1|0|457 |
| chr1_2 | exon | 24101077 | 24102450 | 24101077 | ID=Msa0063520-mRNA-1:exon:8667;Parent=Msa0063520-mRNA-1 |
| chr1_2 | CDS | 24101077 | 24102450 | 24101077 | ID=Msa0063520-mRNA-1:cds;Parent=Msa0063520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
