Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172980 | XP_003591188.1 | 99.221 | 385 | 3 | 0 | 1 | 385 | 1 | 385 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172980 | sp|Q8LB54|PRP38_ARATH | 84.783 | 184 | 28 | 0 | 1 | 184 | 1 | 184 | 1.75e-116 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172980 | A2Q158 | 99.221 | 385 | 3 | 0 | 1 | 385 | 1 | 385 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012940 | Msa0172980 | 0.805782 | 1.130630e-49 | -8.615850e-47 |
| Msa0016540 | Msa0172980 | 0.811874 | 5.628751e-51 | -8.615850e-47 |
| Msa0029630 | Msa0172980 | 0.851669 | 7.635803e-61 | -8.615850e-47 |
| Msa0030300 | Msa0172980 | 0.829747 | 4.330633e-55 | -8.615850e-47 |
| Msa0033880 | Msa0172980 | 0.821556 | 3.791244e-53 | -8.615850e-47 |
| Msa0038000 | Msa0172980 | 0.809711 | 1.653039e-50 | -8.615850e-47 |
| Msa0038440 | Msa0172980 | 0.800571 | 1.353827e-48 | -8.615850e-47 |
| Msa0041690 | Msa0172980 | 0.810370 | 1.192355e-50 | -8.615850e-47 |
| Msa0063520 | Msa0172980 | 0.816603 | 5.079139e-52 | -8.615850e-47 |
| Msa0077900 | Msa0172980 | 0.832384 | 9.749088e-56 | -8.615850e-47 |
| Msa0079920 | Msa0172980 | 0.832862 | 7.418693e-56 | -8.615850e-47 |
| Msa0080190 | Msa0172980 | 0.828344 | 9.474310e-55 | -8.615850e-47 |
| Msa0090550 | Msa0172980 | 0.805477 | 1.310060e-49 | -8.615850e-47 |
| Msa0091610 | Msa0172980 | 0.809287 | 2.038968e-50 | -8.615850e-47 |
| Msa0093010 | Msa0172980 | 0.825128 | 5.549101e-54 | -8.615850e-47 |
| Msa0093850 | Msa0172980 | 0.821841 | 3.258081e-53 | -8.615850e-47 |
| Msa0095360 | Msa0172980 | 0.808007 | 3.826196e-50 | -8.615850e-47 |
| Msa0095770 | Msa0172980 | 0.802220 | 6.221253e-49 | -8.615850e-47 |
| Msa0115370 | Msa0172980 | 0.802321 | 5.931120e-49 | -8.615850e-47 |
| Msa0119900 | Msa0172980 | 0.820982 | 5.143164e-53 | -8.615850e-47 |
| Msa0125450 | Msa0172980 | 0.848776 | 4.941130e-60 | -8.615850e-47 |
| Msa0125540 | Msa0172980 | 0.837504 | 5.000479e-57 | -8.615850e-47 |
| Msa0127850 | Msa0172980 | 0.822745 | 2.009424e-53 | -8.615850e-47 |
| Msa0131590 | Msa0172980 | 0.872459 | 3.130362e-67 | -8.615850e-47 |
| Msa0136120 | Msa0172980 | 0.824551 | 7.590653e-54 | -8.615850e-47 |
| Msa0138360 | Msa0172980 | 0.850462 | 1.671731e-60 | -8.615850e-47 |
| Msa0146080 | Msa0172980 | 0.805554 | 1.262342e-49 | -8.615850e-47 |
| Msa0147980 | Msa0172980 | 0.846752 | 1.783052e-59 | -8.615850e-47 |
| Msa0149440 | Msa0172980 | 0.816345 | 5.802248e-52 | -8.615850e-47 |
| Msa0163510 | Msa0172980 | 0.801696 | 7.971483e-49 | -8.615850e-47 |
| Msa0169610 | Msa0172980 | 0.803561 | 3.286817e-49 | -8.615850e-47 |
| Msa0172980 | Msa0173800 | 0.829442 | 5.136582e-55 | -8.615850e-47 |
| Msa0172980 | Msa0174000 | 0.810234 | 1.275701e-50 | -8.615850e-47 |
| Msa0172980 | Msa0177960 | 0.814333 | 1.624892e-51 | -8.615850e-47 |
| Msa0172980 | Msa0183870 | 0.815211 | 1.038260e-51 | -8.615850e-47 |
| Msa0172980 | Msa0184040 | 0.800073 | 1.710396e-48 | -8.615850e-47 |
| Msa0172980 | Msa0188350 | 0.808494 | 3.012778e-50 | -8.615850e-47 |
| Msa0172980 | Msa0202410 | 0.842021 | 3.333833e-58 | -8.615850e-47 |
| Msa0172980 | Msa0202490 | 0.834951 | 2.227254e-56 | -8.615850e-47 |
| Msa0172980 | Msa0204960 | 0.839083 | 1.958858e-57 | -8.615850e-47 |
| Msa0172980 | Msa0205010 | 0.801157 | 1.027945e-48 | -8.615850e-47 |
| Msa0172980 | Msa0207700 | 0.802746 | 4.845883e-49 | -8.615850e-47 |
| Msa0172980 | Msa0217670 | 0.807984 | 3.868937e-50 | -8.615850e-47 |
| Msa0172980 | Msa0223330 | 0.813032 | 3.142116e-51 | -8.615850e-47 |
| Msa0172980 | Msa0237200 | 0.802501 | 5.445428e-49 | -8.615850e-47 |
| Msa0172980 | Msa0240900 | 0.826675 | 2.382021e-54 | -8.615850e-47 |
| Msa0172980 | Msa0241830 | 0.839007 | 2.049166e-57 | -8.615850e-47 |
| Msa0172980 | Msa0244970 | 0.817055 | 4.021043e-52 | -8.615850e-47 |
| Msa0172980 | Msa0244980 | 0.848641 | 5.385041e-60 | -8.615850e-47 |
| Msa0172980 | Msa0245430 | 0.869317 | 3.388694e-66 | -8.615850e-47 |
| Msa0172980 | Msa0245580 | 0.853093 | 3.000381e-61 | -8.615850e-47 |
| Msa0172980 | Msa0249580 | 0.814021 | 1.904279e-51 | -8.615850e-47 |
| Msa0172980 | Msa0257490 | 0.843240 | 1.582043e-58 | -8.615850e-47 |
| Msa0172980 | Msa0261170 | 0.834729 | 2.532657e-56 | -8.615850e-47 |
| Msa0172980 | Msa0269470 | 0.828604 | 8.196047e-55 | -8.615850e-47 |
| Msa0172980 | Msa0270210 | 0.806720 | 7.172535e-50 | -8.615850e-47 |
| Msa0172980 | Msa0274970 | 0.803385 | 3.575397e-49 | -8.615850e-47 |
| Msa0172980 | Msa0274980 | 0.810011 | 1.424912e-50 | -8.615850e-47 |
| Msa0172980 | Msa0281530 | 0.859548 | 3.833247e-63 | -8.615850e-47 |
| Msa0172980 | Msa0283420 | 0.823713 | 1.194646e-53 | -8.615850e-47 |
| Msa0172980 | Msa0284180 | 0.841208 | 5.463356e-58 | -8.615850e-47 |
| Msa0172980 | Msa0296250 | 0.831422 | 1.684758e-55 | -8.615850e-47 |
| Msa0172980 | Msa0296790 | 0.840191 | 1.008662e-57 | -8.615850e-47 |
| Msa0172980 | Msa0305780 | 0.813102 | 3.034101e-51 | -8.615850e-47 |
| Msa0172980 | Msa0307850 | 0.810457 | 1.141948e-50 | -8.615850e-47 |
| Msa0172980 | Msa0311720 | 0.801692 | 7.985726e-49 | -8.615850e-47 |
| Msa0172980 | Msa0315690 | 0.806307 | 8.766457e-50 | -8.615850e-47 |
| Msa0172980 | Msa0317910 | 0.809028 | 2.316347e-50 | -8.615850e-47 |
| Msa0172980 | Msa0317970 | 0.837358 | 5.450557e-57 | -8.615850e-47 |
| Msa0172980 | Msa0320590 | 0.875017 | 4.292680e-68 | -8.615850e-47 |
| Msa0172980 | Msa0321690 | 0.832388 | 9.728103e-56 | -8.615850e-47 |
| Msa0172980 | Msa0322240 | 0.828914 | 6.897061e-55 | -8.615850e-47 |
| Msa0172980 | Msa0322900 | 0.831485 | 1.625682e-55 | -8.615850e-47 |
| Msa0172980 | Msa0324240 | 0.812808 | 3.518409e-51 | -8.615850e-47 |
| Msa0172980 | Msa0326480 | 0.800078 | 1.706367e-48 | -8.615850e-47 |
| Msa0172980 | Msa0332640 | 0.802472 | 5.520807e-49 | -8.615850e-47 |
| Msa0172980 | Msa0341690 | 0.835716 | 1.426738e-56 | -8.615850e-47 |
| Msa0172980 | Msa0357900 | 0.800754 | 1.242549e-48 | -8.615850e-47 |
| Msa0172980 | Msa0363060 | 0.802898 | 4.509855e-49 | -8.615850e-47 |
| Msa0172980 | Msa0363640 | 0.813944 | 1.980295e-51 | -8.615850e-47 |
| Msa0172980 | Msa0377820 | 0.820205 | 7.756917e-53 | -8.615850e-47 |
| Msa0172980 | Msa0378970 | 0.828878 | 7.038925e-55 | -8.615850e-47 |
| Msa0172980 | Msa0382370 | 0.816040 | 6.787639e-52 | -8.615850e-47 |
| Msa0172980 | Msa0385500 | 0.839685 | 1.366781e-57 | -8.615850e-47 |
| Msa0172980 | Msa0395980 | 0.823031 | 1.723713e-53 | -8.615850e-47 |
| Msa0172980 | Msa0413530 | 0.814318 | 1.637436e-51 | -8.615850e-47 |
| Msa0172980 | Msa0419720 | 0.817726 | 2.839846e-52 | -8.615850e-47 |
| Msa0172980 | Msa0423750 | 0.821667 | 3.574100e-53 | -8.615850e-47 |
| Msa0172980 | Msa0426580 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
| Msa0172980 | Msa0428580 | 0.821483 | 3.941438e-53 | -8.615850e-47 |
| Msa0172980 | Msa0432160 | 0.818763 | 1.654215e-52 | -8.615850e-47 |
| Msa0172980 | Msa0434770 | 0.801346 | 9.403862e-49 | -8.615850e-47 |
| Msa0172980 | Msa0440510 | 0.821372 | 4.180616e-53 | -8.615850e-47 |
| Msa0172980 | Msa0450400 | -0.808716 | 2.701131e-50 | -8.615850e-47 |
| Msa0172980 | Msa0462600 | 0.828783 | 7.419327e-55 | -8.615850e-47 |
| Msa0172980 | Msa0470530 | 0.809382 | 1.944820e-50 | -8.615850e-47 |
| Msa0172980 | Msa0472930 | 0.822754 | 1.999951e-53 | -8.615850e-47 |
| Msa0172980 | Msa0474940 | 0.814605 | 1.414666e-51 | -8.615850e-47 |
| Msa0172980 | Msa0476680 | 0.815291 | 9.969497e-52 | -8.615850e-47 |
| Msa0172980 | Msa0478580 | 0.800953 | 1.131767e-48 | -8.615850e-47 |
| Msa0172980 | Msa0480780 | 0.806489 | 8.022740e-50 | -8.615850e-47 |
| Msa0172980 | Msa0482040 | 0.808575 | 2.895204e-50 | -8.615850e-47 |
| Msa0172980 | Msa0482940 | 0.810056 | 1.393229e-50 | -8.615850e-47 |
| Msa0172980 | Msa0484740 | 0.809172 | 2.157637e-50 | -8.615850e-47 |
| Msa0172980 | Msa0485240 | 0.826737 | 2.302580e-54 | -8.615850e-47 |
| Msa0172980 | Msa0491000 | 0.846256 | 2.435455e-59 | -8.615850e-47 |
| Msa0172980 | Msa0518030 | 0.822558 | 2.221909e-53 | -8.615850e-47 |
| Msa0172980 | Msa0521010 | 0.808836 | 2.546633e-50 | -8.615850e-47 |
| Msa0172980 | Msa0527020 | 0.811191 | 7.920534e-51 | -8.615850e-47 |
| Msa0172980 | Msa0527190 | 0.844986 | 5.380918e-59 | -8.615850e-47 |
| Msa0172980 | Msa0527540 | 0.804005 | 2.658994e-49 | -8.615850e-47 |
| Msa0172980 | Msa0531250 | 0.839926 | 1.183211e-57 | -8.615850e-47 |
| Msa0172980 | Msa0542560 | 0.808466 | 3.055407e-50 | -8.615850e-47 |
| Msa0172980 | Msa0547160 | 0.825598 | 4.295830e-54 | -8.615850e-47 |
| Msa0172980 | Msa0547990 | 0.825177 | 5.402739e-54 | -8.615850e-47 |
| Msa0172980 | Msa0556060 | 0.804802 | 1.813740e-49 | -8.615850e-47 |
| Msa0172980 | Msa0560500 | 0.820917 | 5.324809e-53 | -8.615850e-47 |
| Msa0172980 | Msa0581110 | 0.844349 | 7.989390e-59 | -8.615850e-47 |
| Msa0172980 | Msa0581280 | 0.800213 | 1.601233e-48 | -8.615850e-47 |
| Msa0172980 | Msa0588090 | 0.827487 | 1.522553e-54 | -8.615850e-47 |
| Msa0172980 | Msa0593700 | 0.802638 | 5.101803e-49 | -8.615850e-47 |
| Msa0172980 | Msa0595170 | 0.814323 | 1.633169e-51 | -8.615850e-47 |
| Msa0172980 | Msa0600450 | 0.825427 | 4.716518e-54 | -8.615850e-47 |
| Msa0172980 | Msa0603570 | 0.808304 | 3.307155e-50 | -8.615850e-47 |
| Msa0172980 | Msa0610550 | 0.814372 | 1.592923e-51 | -8.615850e-47 |
| Msa0172980 | Msa0618950 | 0.826835 | 2.181493e-54 | -8.615850e-47 |
| Msa0172980 | Msa0618970 | 0.801851 | 7.408669e-49 | -8.615850e-47 |
| Msa0172980 | Msa0619420 | 0.810669 | 1.027329e-50 | -8.615850e-47 |
| Msa0172980 | Msa0623990 | 0.808915 | 2.449026e-50 | -8.615850e-47 |
| Msa0172980 | Msa0624060 | 0.802531 | 5.367857e-49 | -8.615850e-47 |
| Msa0172980 | Msa0628420 | 0.836616 | 8.431814e-57 | -8.615850e-47 |
| Msa0172980 | Msa0629240 | 0.809603 | 1.743966e-50 | -8.615850e-47 |
| Msa0172980 | Msa0634890 | 0.819773 | 9.739235e-53 | -8.615850e-47 |
| Msa0172980 | Msa0640940 | 0.815097 | 1.100934e-51 | -8.615850e-47 |
| Msa0172980 | Msa0642970 | 0.826765 | 2.266201e-54 | -8.615850e-47 |
| Msa0172980 | Msa0644030 | 0.833832 | 4.251069e-56 | -8.615850e-47 |
| Msa0172980 | Msa0652690 | 0.807194 | 5.695191e-50 | -8.615850e-47 |
| Msa0172980 | Msa0659550 | 0.801950 | 7.069345e-49 | -8.615850e-47 |
| Msa0172980 | Msa0662630 | 0.818685 | 1.723232e-52 | -8.615850e-47 |
| Msa0172980 | Msa0665440 | 0.801555 | 8.520592e-49 | -8.615850e-47 |
| Msa0172980 | Msa0666230 | 0.817098 | 3.932928e-52 | -8.615850e-47 |
| Msa0172980 | Msa0672550 | 0.802594 | 5.209739e-49 | -8.615850e-47 |
| Msa0172980 | Msa0676130 | 0.801279 | 9.704479e-49 | -8.615850e-47 |
| Msa0172980 | Msa0677530 | 0.810881 | 9.246245e-51 | -8.615850e-47 |
| Msa0172980 | Msa0679360 | 0.823459 | 1.369232e-53 | -8.615850e-47 |
| Msa0172980 | Msa0682680 | 0.810998 | 8.720081e-51 | -8.615850e-47 |
| Msa0172980 | Msa0689440 | 0.805628 | 1.217824e-49 | -8.615850e-47 |
| Msa0172980 | Msa0690310 | 0.834936 | 2.246867e-56 | -8.615850e-47 |
| Msa0172980 | Msa0693210 | 0.816386 | 5.679330e-52 | -8.615850e-47 |
| Msa0172980 | Msa0693330 | 0.812261 | 4.633608e-51 | -8.615850e-47 |
| Msa0172980 | Msa0697720 | 0.827061 | 1.925558e-54 | -8.615850e-47 |
| Msa0172980 | Msa0703440 | 0.804875 | 1.751110e-49 | -8.615850e-47 |
| Msa0172980 | Msa0705090 | 0.809730 | 1.637652e-50 | -8.615850e-47 |
| Msa0172980 | Msa0705390 | 0.823444 | 1.380418e-53 | -8.615850e-47 |
| Msa0172980 | Msa0710270 | 0.811157 | 8.056025e-51 | -8.615850e-47 |
| Msa0172980 | Msa0741440 | 0.833049 | 6.666423e-56 | -8.615850e-47 |
| Msa0172980 | Msa0743530 | 0.809811 | 1.573576e-50 | -8.615850e-47 |
| Msa0172980 | Msa0744100 | 0.818647 | 1.757486e-52 | -8.615850e-47 |
| Msa0172980 | Msa0746170 | 0.816054 | 6.739459e-52 | -8.615850e-47 |
| Msa0172980 | Msa0746210 | 0.815755 | 7.856390e-52 | -8.615850e-47 |
| Msa0172980 | Msa0752700 | 0.848244 | 6.933793e-60 | -8.615850e-47 |
| Msa0172980 | Msa0755150 | 0.829540 | 4.860941e-55 | -8.615850e-47 |
| Msa0172980 | Msa0755330 | 0.832941 | 7.089364e-56 | -8.615850e-47 |
| Msa0172980 | Msa0781020 | 0.818811 | 1.613331e-52 | -8.615850e-47 |
| Msa0172980 | Msa0784480 | 0.810532 | 1.099812e-50 | -8.615850e-47 |
| Msa0172980 | Msa0786750 | 0.837119 | 6.271126e-57 | -8.615850e-47 |
| Msa0172980 | Msa0788120 | 0.814098 | 1.831625e-51 | -8.615850e-47 |
| Msa0172980 | Msa0794970 | 0.851878 | 6.661608e-61 | -8.615850e-47 |
| Msa0172980 | Msa0808800 | 0.831205 | 1.904652e-55 | -8.615850e-47 |
| Msa0172980 | Msa0822500 | 0.829988 | 3.781276e-55 | -8.615850e-47 |
| Msa0172980 | Msa0825270 | 0.815592 | 8.544807e-52 | -8.615850e-47 |
| Msa0172980 | Msa0828590 | 0.821050 | 4.961014e-53 | -8.615850e-47 |
| Msa0172980 | Msa0831100 | 0.857608 | 1.453322e-62 | -8.615850e-47 |
| Msa0172980 | Msa0833190 | -0.808256 | 3.385762e-50 | -8.615850e-47 |
| Msa0172980 | Msa0838370 | 0.820685 | 6.019940e-53 | -8.615850e-47 |
| Msa0172980 | Msa0853120 | 0.808967 | 2.387499e-50 | -8.615850e-47 |
| Msa0172980 | Msa0858440 | 0.811843 | 5.714701e-51 | -8.615850e-47 |
| Msa0172980 | Msa0880450 | 0.801600 | 8.340137e-49 | -8.615850e-47 |
| Msa0172980 | Msa0892640 | 0.837067 | 6.469438e-57 | -8.615850e-47 |
| Msa0172980 | Msa0903780 | 0.825738 | 3.979575e-54 | -8.615850e-47 |
| Msa0172980 | Msa0944200 | 0.814223 | 1.719135e-51 | -8.615850e-47 |
| Msa0172980 | Msa0945240 | 0.808788 | 2.607029e-50 | -8.615850e-47 |
| Msa0172980 | Msa0958000 | 0.828051 | 1.114209e-54 | -8.615850e-47 |
| Msa0172980 | Msa0970600 | 0.803191 | 3.921796e-49 | -8.615850e-47 |
| Msa0172980 | Msa0973320 | 0.804496 | 2.101094e-49 | -8.615850e-47 |
| Msa0172980 | Msa0980540 | 0.826624 | 2.448873e-54 | -8.615850e-47 |
| Msa0172980 | Msa1002960 | 0.818986 | 1.472109e-52 | -8.615850e-47 |
| Msa0172980 | Msa1029070 | 0.827534 | 1.483855e-54 | -8.615850e-47 |
| Msa0172980 | Msa1034500 | 0.804479 | 2.117674e-49 | -8.615850e-47 |
| Msa0172980 | Msa1037510 | 0.801576 | 8.434902e-49 | -8.615850e-47 |
| Msa0172980 | Msa1037520 | 0.825043 | 5.813728e-54 | -8.615850e-47 |
| Msa0172980 | Msa1039810 | 0.817739 | 2.821234e-52 | -8.615850e-47 |
| Msa0172980 | Msa1039900 | 0.830569 | 2.727756e-55 | -8.615850e-47 |
| Msa0172980 | Msa1069820 | 0.806132 | 9.543196e-50 | -8.615850e-47 |
| Msa0172980 | Msa1070390 | 0.816570 | 5.165670e-52 | -8.615850e-47 |
| Msa0172980 | Msa1072600 | 0.824493 | 7.832794e-54 | -8.615850e-47 |
| Msa0172980 | Msa1080640 | 0.801337 | 9.443033e-49 | -8.615850e-47 |
| Msa0172980 | Msa1089320 | 0.808371 | 3.200522e-50 | -8.615850e-47 |
| Msa0172980 | Msa1089450 | 0.850191 | 1.991265e-60 | -8.615850e-47 |
| Msa0172980 | Msa1096070 | 0.804443 | 2.155129e-49 | -8.615850e-47 |
| Msa0172980 | Msa1123350 | 0.821400 | 4.119510e-53 | -8.615850e-47 |
| Msa0172980 | Msa1126500 | 0.800936 | 1.140518e-48 | -8.615850e-47 |
| Msa0172980 | Msa1126830 | 0.843715 | 1.181382e-58 | -8.615850e-47 |
| Msa0172980 | Msa1127590 | 0.857753 | 1.316549e-62 | -8.615850e-47 |
| Msa0172980 | Msa1128270 | 0.823619 | 1.256201e-53 | -8.615850e-47 |
| Msa0172980 | Msa1128280 | 0.838646 | 2.541366e-57 | -8.615850e-47 |
| Msa0172980 | Msa1130400 | 0.819762 | 9.797486e-53 | -8.615850e-47 |
| Msa0172980 | Msa1130980 | 0.805852 | 1.092567e-49 | -8.615850e-47 |
| Msa0172980 | Msa1145810 | 0.801406 | 9.139555e-49 | -8.615850e-47 |
| Msa0172980 | Msa1154490 | 0.807065 | 6.063285e-50 | -8.615850e-47 |
| Msa0172980 | Msa1156160 | 0.830104 | 3.543042e-55 | -8.615850e-47 |
| Msa0172980 | Msa1158230 | 0.808141 | 3.583801e-50 | -8.615850e-47 |
| Msa0172980 | Msa1165270 | 0.844884 | 5.733068e-59 | -8.615850e-47 |
| Msa0172980 | Msa1165780 | 0.848841 | 4.738661e-60 | -8.615850e-47 |
| Msa0172980 | Msa1176980 | 0.814428 | 1.548614e-51 | -8.615850e-47 |
| Msa0172980 | Msa1178580 | 0.851844 | 6.811245e-61 | -8.615850e-47 |
| Msa0172980 | Msa1204830 | 0.800430 | 1.446468e-48 | -8.615850e-47 |
| Msa0172980 | Msa1205590 | 0.806302 | 8.787911e-50 | -8.615850e-47 |
| Msa0172980 | Msa1206650 | 0.833993 | 3.874020e-56 | -8.615850e-47 |
| Msa0172980 | Msa1208020 | 0.810783 | 9.710120e-51 | -8.615850e-47 |
| Msa0172980 | Msa1216260 | 0.812770 | 3.585917e-51 | -8.615850e-47 |
| Msa0172980 | Msa1218450 | 0.815369 | 9.576297e-52 | -8.615850e-47 |
| Msa0172980 | Msa1219000 | 0.820650 | 6.131157e-53 | -8.615850e-47 |
| Msa0172980 | Msa1227460 | 0.802390 | 5.739449e-49 | -8.615850e-47 |
| Msa0172980 | Msa1228040 | 0.808375 | 3.194588e-50 | -8.615850e-47 |
| Msa0172980 | Msa1233850 | 0.850456 | 1.678552e-60 | -8.615850e-47 |
| Msa0172980 | Msa1262890 | 0.818700 | 1.709573e-52 | -8.615850e-47 |
| Msa0172980 | Msa1264210 | 0.812136 | 4.935405e-51 | -8.615850e-47 |
| Msa0172980 | Msa1270420 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
| Msa0172980 | Msa1271130 | 0.807333 | 5.319678e-50 | -8.615850e-47 |
| Msa0172980 | Msa1276150 | 0.851599 | 7.988664e-61 | -8.615850e-47 |
| Msa0172980 | Msa1278900 | 0.823274 | 1.512656e-53 | -8.615850e-47 |
| Msa0172980 | Msa1328640 | 0.800739 | 1.251405e-48 | -8.615850e-47 |
| Msa0172980 | Msa1331250 | 0.819310 | 1.242373e-52 | -8.615850e-47 |
| Msa0172980 | Msa1332760 | 0.831243 | 1.864438e-55 | -8.615850e-47 |
| Msa0172980 | Msa1340480 | 0.801064 | 1.074057e-48 | -8.615850e-47 |
| Msa0172980 | Msa1343290 | 0.807365 | 5.238539e-50 | -8.615850e-47 |
| Msa0172980 | Msa1344310 | 0.814250 | 1.695080e-51 | -8.615850e-47 |
| Msa0172980 | Msa1351540 | 0.820663 | 6.089714e-53 | -8.615850e-47 |
| Msa0172980 | Msa1356610 | 0.801290 | 9.652770e-49 | -8.615850e-47 |
| Msa0172980 | Msa1360980 | 0.801057 | 1.077249e-48 | -8.615850e-47 |
| Msa0172980 | Msa1362420 | 0.807719 | 4.406527e-50 | -8.615850e-47 |
| Msa0172980 | Msa1364210 | 0.808131 | 3.601553e-50 | -8.615850e-47 |
| Msa0172980 | Msa1369690 | 0.818477 | 1.920659e-52 | -8.615850e-47 |
| Msa0172980 | Msa1370590 | 0.809949 | 1.469183e-50 | -8.615850e-47 |
| Msa0172980 | Msa1371520 | 0.831284 | 1.820999e-55 | -8.615850e-47 |
| Msa0172980 | Msa1373850 | 0.812183 | 4.818184e-51 | -8.615850e-47 |
| Msa0172980 | Msa1378410 | 0.803083 | 4.129457e-49 | -8.615850e-47 |
| Msa0172980 | Msa1381350 | 0.817128 | 3.871880e-52 | -8.615850e-47 |
| Msa0172980 | Msa1384100 | 0.811857 | 5.675148e-51 | -8.615850e-47 |
| Msa0172980 | Msa1389850 | 0.807362 | 5.244866e-50 | -8.615850e-47 |
| Msa0172980 | Msa1389880 | 0.800302 | 1.536270e-48 | -8.615850e-47 |
| Msa0172980 | Msa1407190 | 0.834812 | 2.414076e-56 | -8.615850e-47 |
| Msa0172980 | Msa1411950 | 0.840468 | 8.537630e-58 | -8.615850e-47 |
| Msa0172980 | Msa1416260 | 0.811636 | 6.341748e-51 | -8.615850e-47 |
| Msa0172980 | Msa1418240 | 0.820847 | 5.523834e-53 | -8.615850e-47 |
| Msa0172980 | Msa1418340 | 0.803935 | 2.748634e-49 | -8.615850e-47 |
| Msa0172980 | Msa1432130 | 0.835603 | 1.524189e-56 | -8.615850e-47 |
| Msa0172980 | Msa1434740 | 0.827100 | 1.884806e-54 | -8.615850e-47 |
| Msa0172980 | Msa1435770 | 0.811602 | 6.450636e-51 | -8.615850e-47 |
| Msa0172980 | Msa1438050 | 0.807896 | 4.039582e-50 | -8.615850e-47 |
| Msa0172980 | Msa1440310 | 0.818643 | 1.760959e-52 | -8.615850e-47 |
| Msa0172980 | Msa1444120 | 0.813690 | 2.253093e-51 | -8.615850e-47 |
| Msa0172980 | Msa1446080 | 0.820680 | 6.036007e-53 | -8.615850e-47 |
| Msa0172980 | Msa1450720 | 0.828446 | 8.952211e-55 | -8.615850e-47 |
| Msa0172980 | Msa1454680 | 0.802199 | 6.284689e-49 | -8.615850e-47 |
| Msa0172980 | Msa1458810 | 0.813264 | 2.794941e-51 | -8.615850e-47 |
| Msa0172980 | Msa1459960 | 0.816083 | 6.638068e-52 | -8.615850e-47 |
| Msa0172980 | Msa1461540 | 0.806625 | 7.511012e-50 | -8.615850e-47 |
| Msa0172980 | Msa1462910 | 0.818311 | 2.094657e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172980 | MtrunA17_Chr1g0192441 | 99.221 | 385 | 3 | 0 | 1 | 385 | 1 | 385 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0172980 | AT2G40650.1 | 84.783 | 184 | 28 | 0 | 1 | 184 | 1 | 184 | 1.77e-117 | 345 |
Find 133 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTATCTCTTTCCCTTGC+AGG | 0.202403 | 1_4:+58175428 | None:intergenic |
| GCATTCTATTTGCGTCTTAC+TGG | 0.216581 | 1_4:-58176526 | Msa0172980:CDS |
| TGAACTGTATGGCTTGAATT+TGG | 0.239668 | 1_4:-58173337 | Msa0172980:three_prime_UTR |
| AAAAGGAAAGGGACAGAGAT+AGG | 0.253347 | 1_4:-58173722 | Msa0172980:CDS |
| TCTATTGGTACTCTGATAAA+AGG | 0.295423 | 1_4:-58173059 | Msa0172980:three_prime_UTR |
| TCCTCAGCTCCATCTCTTCT+AGG | 0.306646 | 1_4:+58173498 | None:intergenic |
| TTCGATGACGATTTCTTTCT+CGG | 0.306868 | 1_4:+58176685 | None:intergenic |
| TGCACTTTGTCTAGGTTCTA+AGG | 0.312757 | 1_4:+58175633 | None:intergenic |
| ACATGAAGGGAGTGGGTTTC+CGG | 0.331461 | 1_4:+58176738 | None:intergenic |
| GAAACTGCGGCGGAAATTAC+CGG | 0.336356 | 1_4:-58176452 | Msa0172980:CDS |
| CCTCGAATGCTCTTCGCTGC+TGG | 0.349121 | 1_4:+58176911 | None:intergenic |
| ATAGAGATCGGGACAGAGAT+AGG | 0.353256 | 1_4:-58173746 | Msa0172980:CDS |
| CTGTTTGCTTCTGCAATCTC+TGG | 0.359328 | 1_4:+58173402 | None:intergenic |
| CCCTATCTCTTTCCCTTGCA+GGG | 0.370664 | 1_4:+58175429 | None:intergenic |
| TACTGATGTATATCATTATC+TGG | 0.372115 | 1_4:-58176497 | Msa0172980:CDS |
| AGATCTATCAGCACACATAT+TGG | 0.372870 | 1_4:-58176847 | Msa0172980:CDS |
| GAAGGAAAAGAAAGAAAAGA+AGG | 0.374717 | 1_4:-58173457 | Msa0172980:CDS |
| GCTTCTGCAATCTCTGGATC+TGG | 0.377528 | 1_4:+58173408 | None:intergenic |
| TGAGGAGGAAGAGGAGAATG+AGG | 0.386800 | 1_4:-58175596 | Msa0172980:CDS |
| AGGCAATCAAAACAACTCTA+TGG | 0.390896 | 1_4:+58173145 | None:intergenic |
| GCCCTGCAAGGGAAAGAGAT+AGG | 0.391241 | 1_4:-58175430 | Msa0172980:CDS |
| GAAAGAAAAGAAGGAAAAGA+AGG | 0.397502 | 1_4:-58173448 | Msa0172980:CDS |
| ATGCAGGTATGTGAGGATAC+TGG | 0.405268 | 1_4:-58176551 | Msa0172980:intron |
| TGAATTGACAATTGCCGCTC+AGG | 0.407360 | 1_4:+58173235 | None:intergenic |
| TTTCTTCCCTCAGACGATAT+CGG | 0.414737 | 1_4:+58173685 | None:intergenic |
| CTGAGGGAAGAAAAGGATTA+TGG | 0.415767 | 1_4:-58173675 | Msa0172980:CDS |
| AGCCGTTGTATAATGATTAT+AGG | 0.416127 | 1_4:-58176474 | Msa0172980:CDS |
| GATTTGTATGATATAGATAA+AGG | 0.418036 | 1_4:+58173125 | None:intergenic |
| GCTCCATGGCTTTGTCGACT+AGG | 0.420325 | 1_4:+58176792 | None:intergenic |
| GACCACCTCGGCGGCACTTA+CGG | 0.427204 | 1_4:-58176767 | Msa0172980:CDS |
| AGAGTGTTCAATTGATGTAA+TGG | 0.429494 | 1_4:-58173088 | Msa0172980:three_prime_UTR |
| AAAGGAAAGGGACAGAGATA+GGG | 0.437635 | 1_4:-58173721 | Msa0172980:CDS |
| TCTTCAAGTGCACTTTGTCT+AGG | 0.438667 | 1_4:+58175625 | None:intergenic |
| GGTTGTGAATCGTGATGAAT+TGG | 0.439341 | 1_4:+58176952 | None:intergenic |
| CAGAGATTGCAGAAGCAAAC+AGG | 0.439672 | 1_4:-58173401 | Msa0172980:CDS |
| GCGGCACTTACGGTGGCAAC+CGG | 0.442983 | 1_4:-58176757 | Msa0172980:CDS |
| AAACAGGATACGAGCATCAC+TGG | 0.445067 | 1_4:-58173385 | Msa0172980:CDS |
| CTCCATGGCTTTGTCGACTA+GGG | 0.448233 | 1_4:+58176793 | None:intergenic |
| GCGGCAATTGTCAATTCAAC+AGG | 0.451593 | 1_4:-58173230 | Msa0172980:three_prime_UTR |
| CTCAATAACTTACGTCCATC+CGG | 0.452000 | 1_4:+58176433 | None:intergenic |
| AGAAAGGAAAGCACCTTCTC+AGG | 0.452898 | 1_4:+58175550 | None:intergenic |
| ACCTTCTCAGGCTCCTCAGC+AGG | 0.454985 | 1_4:+58175562 | None:intergenic |
| AGTTCAGATCACATCTTAAG+TGG | 0.458888 | 1_4:+58173354 | None:intergenic |
| AGGTGGACTCTTGAATCTCT+TGG | 0.461088 | 1_4:-58175658 | Msa0172980:CDS |
| ATGTAATGGCTTGAGTCTAT+TGG | 0.465152 | 1_4:-58173074 | Msa0172980:three_prime_UTR |
| AGAACAATGCTTCGGCTTAA+CGG | 0.471701 | 1_4:-58176822 | Msa0172980:CDS |
| CCAGCAGCGAAGAGCATTCG+AGG | 0.474837 | 1_4:-58176911 | Msa0172980:CDS |
| CTCTGTCCCGATCTCTATCT+CGG | 0.475661 | 1_4:+58173751 | None:intergenic |
| TGTATGGCTTGAATTTGGAC+TGG | 0.487500 | 1_4:-58173332 | Msa0172980:three_prime_UTR |
| CAAGGAGTCGAAGTAGAAGC+AGG | 0.498926 | 1_4:-58173581 | Msa0172980:CDS |
| TCGATGACGATTTCTTTCTC+GGG | 0.499616 | 1_4:+58176686 | None:intergenic |
| GAGAAGGCAGGGAGCGCGAG+AGG | 0.505596 | 1_4:-58173644 | Msa0172980:CDS |
| ATCGTGACCGTGGTAGGAGG+AGG | 0.511017 | 1_4:-58173611 | Msa0172980:CDS |
| ATATCGTCTGAGGGAAGAAA+AGG | 0.514906 | 1_4:-58173682 | Msa0172980:CDS |
| AACACTCTAGTTGTCAGTAC+AGG | 0.516645 | 1_4:+58173103 | None:intergenic |
| AAAGGGACAGAGATAGGGAG+AGG | 0.519341 | 1_4:-58173716 | Msa0172980:CDS |
| CAGAGATAGGGAAAAGGAAA+GGG | 0.522303 | 1_4:-58173733 | Msa0172980:CDS |
| TAGAGATCGGGACAGAGATA+GGG | 0.522697 | 1_4:-58173745 | Msa0172980:CDS |
| AGCGTAAGTCCTAGAAGAGA+TGG | 0.522785 | 1_4:-58173507 | Msa0172980:CDS |
| GCCGAGGTGGTCGAGCTCCA+TGG | 0.522793 | 1_4:+58176778 | None:intergenic |
| TATTGGAAAGAACAATGCTT+CGG | 0.527020 | 1_4:-58176830 | Msa0172980:CDS |
| AGAAGGAAAAGAAGGATGAC+GGG | 0.527671 | 1_4:-58173440 | Msa0172980:CDS |
| TGTAGGTGCAGCGGTATGCT+TGG | 0.533282 | 1_4:-58173179 | Msa0172980:three_prime_UTR |
| CTATGCCGCGGATTAAGAAA+AGG | 0.538102 | 1_4:-58176251 | Msa0172980:intron |
| TGCAGGTATGTGAGGATACT+GGG | 0.544095 | 1_4:-58176550 | Msa0172980:intron |
| CACCGTAAGTGCCGCCGAGG+TGG | 0.544664 | 1_4:+58176765 | None:intergenic |
| CACTGCTCTTGCGATATGAA+TGG | 0.549939 | 1_4:-58173018 | Msa0172980:three_prime_UTR |
| TAGACAAAGTGCACTTGAAG+AGG | 0.550517 | 1_4:-58175623 | Msa0172980:CDS |
| CCCTGCAAGGGAAAGAGATA+GGG | 0.555278 | 1_4:-58175429 | Msa0172980:CDS |
| GTATGGCTTGAATTTGGACT+GGG | 0.555839 | 1_4:-58173331 | Msa0172980:three_prime_UTR |
| ATGGTCGTGAGAGAGAAGGC+AGG | 0.557251 | 1_4:-58173656 | Msa0172980:CDS |
| TATGACAGAGAGCGTGGACG+TGG | 0.558775 | 1_4:-58173774 | Msa0172980:CDS |
| TCCTAGAAGAGATGGAGCTG+AGG | 0.561364 | 1_4:-58173499 | Msa0172980:CDS |
| TCGGGACAGAGATAGGGAAA+AGG | 0.563174 | 1_4:-58173739 | Msa0172980:CDS |
| GCCTGCTGAGGAGCCTGAGA+AGG | 0.563693 | 1_4:-58175563 | Msa0172980:intron |
| GACGAGGCACATGAAGGGAG+TGG | 0.564286 | 1_4:+58176730 | None:intergenic |
| AAGAAGGAAAAGAAGGATGA+CGG | 0.567699 | 1_4:-58173441 | Msa0172980:CDS |
| GACGTGGCCGAGATAGAGAT+CGG | 0.570627 | 1_4:-58173758 | Msa0172980:CDS |
| GATCGCAAGGAACATGATGG+TGG | 0.570891 | 1_4:-58173558 | Msa0172980:CDS |
| AATCGTGATGAATTGGATGA+TGG | 0.573412 | 1_4:+58176959 | None:intergenic |
| ATCGCAAGGAACATGATGGT+GGG | 0.574370 | 1_4:-58173557 | Msa0172980:CDS |
| ACAGAGATAGGGAAAAGGAA+AGG | 0.577809 | 1_4:-58173734 | Msa0172980:CDS |
| AACCCTAGTCGACAAAGCCA+TGG | 0.577816 | 1_4:-58176795 | Msa0172980:CDS |
| ACAGAGATCGTGACCGTGGT+AGG | 0.578698 | 1_4:-58173617 | Msa0172980:CDS |
| TGGATCAGTGCGATTTGCCA+TGG | 0.579045 | 1_4:+58176931 | None:intergenic |
| CTGCAATCTCTGGATCTGGA+TGG | 0.579331 | 1_4:+58173412 | None:intergenic |
| TGGTGAGCCAAAGAAGAAGA+AGG | 0.579870 | 1_4:-58173475 | Msa0172980:CDS |
| AGTAGCTCCTCCTCCTACCA+CGG | 0.582815 | 1_4:+58173604 | None:intergenic |
| AGAAGAGATGGAGCTGAGGA+TGG | 0.583701 | 1_4:-58173495 | Msa0172980:CDS |
| ATCGTGGGCGAAGCCCTGCA+AGG | 0.584499 | 1_4:-58175442 | Msa0172980:CDS |
| AAGTAGAAGCAGGGATCGCA+AGG | 0.585476 | 1_4:-58173571 | Msa0172980:CDS |
| TTTCATGACGAGGCACATGA+AGG | 0.588448 | 1_4:+58176724 | None:intergenic |
| GGCAATAGCATGTTACCTCA+AGG | 0.590742 | 1_4:-58173295 | Msa0172980:three_prime_UTR |
| AATCTCTGGATCTGGATGGT+CGG | 0.593545 | 1_4:+58173416 | None:intergenic |
| ACGTGGCCGAGATAGAGATC+GGG | 0.596361 | 1_4:-58173757 | Msa0172980:CDS |
| GTTTATAGGATTATCATCGT+GGG | 0.596566 | 1_4:-58175457 | Msa0172980:intron |
| ACAGAGACCGATATCGTCTG+AGG | 0.596802 | 1_4:-58173692 | Msa0172980:CDS |
| ACGAGGCACATGAAGGGAGT+GGG | 0.599318 | 1_4:+58176731 | None:intergenic |
| GAATTGACAATTGCCGCTCA+GGG | 0.600465 | 1_4:+58173236 | None:intergenic |
| GAGATCGTGACCGTGGTAGG+AGG | 0.602297 | 1_4:-58173614 | Msa0172980:CDS |
| TCGTGGGCGAAGCCCTGCAA+GGG | 0.603091 | 1_4:-58175441 | Msa0172980:CDS |
| TGGTCGTGAGAGAGAAGGCA+GGG | 0.605694 | 1_4:-58173655 | Msa0172980:CDS |
| TTCATGACGAGGCACATGAA+GGG | 0.606717 | 1_4:+58176725 | None:intergenic |
| TGCTTTGACACATGTTGATG+AGG | 0.607496 | 1_4:-58176316 | Msa0172980:CDS |
| GATTATGGTCGTGAGAGAGA+AGG | 0.609683 | 1_4:-58173660 | Msa0172980:CDS |
| GTAGGAGGAGGAGCTACTCA+AGG | 0.610437 | 1_4:-58173599 | Msa0172980:CDS |
| AAGGGACAGAGATAGGGAGA+GGG | 0.613155 | 1_4:-58173715 | Msa0172980:CDS |
| GGTTTATAGGATTATCATCG+TGG | 0.614925 | 1_4:-58175458 | Msa0172980:intron |
| AACAGGATACGAGCATCACT+GGG | 0.622392 | 1_4:-58173384 | Msa0172980:CDS |
| AAGATGTGATCTGAACTGTA+TGG | 0.623132 | 1_4:-58173348 | Msa0172980:exon |
| AGAGATTATGACAGAGAGCG+TGG | 0.623322 | 1_4:-58173780 | Msa0172980:CDS |
| TTCCTATAATCATTATACAA+CGG | 0.623715 | 1_4:+58176472 | None:intergenic |
| AAGGAGTCGAAGTAGAAGCA+GGG | 0.630233 | 1_4:-58173580 | Msa0172980:CDS |
| AGGGATCGCAAGGAACATGA+TGG | 0.633153 | 1_4:-58173561 | Msa0172980:CDS |
| TGCCACCGTAAGTGCCGCCG+AGG | 0.634024 | 1_4:+58176762 | None:intergenic |
| CACCTCGGCGGCACTTACGG+TGG | 0.637349 | 1_4:-58176764 | Msa0172980:CDS |
| AGAGACAGAGATCGTGACCG+TGG | 0.637818 | 1_4:-58173621 | Msa0172980:CDS |
| CAGAGACCGATATCGTCTGA+GGG | 0.649302 | 1_4:-58173691 | Msa0172980:CDS |
| GGATAATGAACAGCCTGCTG+AGG | 0.651475 | 1_4:-58175575 | Msa0172980:CDS |
| TTCATCACGATTCACAACCA+TGG | 0.652686 | 1_4:-58176948 | Msa0172980:exon |
| ATGTACTTGTGTAGGTGCAG+CGG | 0.660123 | 1_4:-58173188 | Msa0172980:three_prime_UTR |
| CTGCGGCGGAAATTACCGGA+TGG | 0.660635 | 1_4:-58176448 | Msa0172980:CDS |
| GGACTGGGTTACAAAAGACA+AGG | 0.668930 | 1_4:-58173316 | Msa0172980:three_prime_UTR |
| ATACAAGTATGTACTTGTGT+AGG | 0.675592 | 1_4:-58173196 | Msa0172980:three_prime_UTR |
| GACGTGATAGTCATAGACAC+AGG | 0.680693 | 1_4:-58175400 | Msa0172980:intron |
| TCGCAAGGAACATGATGGTG+GGG | 0.683038 | 1_4:-58173556 | Msa0172980:CDS |
| GCCATGGAGCTCGACCACCT+CGG | 0.691184 | 1_4:-58176779 | Msa0172980:CDS |
| ATGATTATAGGAAACTGCGG+CGG | 0.708986 | 1_4:-58176462 | Msa0172980:CDS |
| GTCAAACGTCACAAACCTTG+AGG | 0.710882 | 1_4:+58173280 | None:intergenic |
| ATAATGATTATAGGAAACTG+CGG | 0.718715 | 1_4:-58176465 | Msa0172980:CDS |
| TGTGCTGATAGATCTTTGAA+CGG | 0.719231 | 1_4:+58176855 | None:intergenic |
| GCTGTGATATTGCTATGCCG+CGG | 0.720225 | 1_4:-58176263 | Msa0172980:CDS |
| ATGGAGCTCGACCACCTCGG+CGG | 0.724394 | 1_4:-58176776 | Msa0172980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAAGAAACATATATT+TGG | + | chr1_4:58175994-58176013 | None:intergenic | 10.0% |
| !!! | TAATATTTTTTGAAAAATGC+AGG | - | chr1_4:58173444-58173463 | Msa0172980:CDS | 15.0% |
| !! | TTCCTTTATTAAATAAATGT+TGG | - | chr1_4:58175059-58175078 | Msa0172980:intron | 15.0% |
| !! | ATCCAACATTTATTTAATAA+AGG | + | chr1_4:58175064-58175083 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTGATTTATAGA+TGG | - | chr1_4:58175787-58175806 | Msa0172980:intron | 15.0% |
| !! | TTCCTATAATCATTATACAA+CGG | + | chr1_4:58173542-58173561 | None:intergenic | 20.0% |
| !!! | TTTACAGTTTCATATTTTTG+TGG | - | chr1_4:58174294-58174313 | Msa0172980:intron | 20.0% |
| !!! | ACTTCTTTTTATTTGCTTTT+TGG | - | chr1_4:58174719-58174738 | Msa0172980:intron | 20.0% |
| !!! | CTTCTTTTTATTTGCTTTTT+GGG | - | chr1_4:58174720-58174739 | Msa0172980:intron | 20.0% |
| !! | AATCCAAATCTTCTATAAAT+AGG | + | chr1_4:58175039-58175058 | None:intergenic | 20.0% |
| !!! | ATTGCCTATTTTTTTTAATC+TGG | - | chr1_4:58175090-58175109 | Msa0172980:intron | 20.0% |
| !!! | TTGCCTATTTTTTTTAATCT+GGG | - | chr1_4:58175091-58175110 | Msa0172980:intron | 20.0% |
| !! | AAAATTAATAATTCTCCACT+TGG | - | chr1_4:58175117-58175136 | Msa0172980:intron | 20.0% |
| !! | ATCCTGTATTTCATAAAAAT+TGG | - | chr1_4:58175357-58175376 | Msa0172980:intron | 20.0% |
| !! | TCCTGTATTTCATAAAAATT+GGG | - | chr1_4:58175358-58175377 | Msa0172980:intron | 20.0% |
| !!! | AGTTTTTAGTTTTTTGTTTG+AGG | - | chr1_4:58175658-58175677 | Msa0172980:CDS | 20.0% |
| !! | TTAAAGTGACATGTAATAAT+TGG | + | chr1_4:58175703-58175722 | None:intergenic | 20.0% |
| !! | ATGATAACATCAATGATAAA+AGG | + | chr1_4:58175813-58175832 | None:intergenic | 20.0% |
| !! | TAAAAGAAACATATATTTGG+CGG | + | chr1_4:58175991-58176010 | None:intergenic | 20.0% |
| !!! | TCATTAGTGATAAATTTTGT+TGG | - | chr1_4:58176137-58176156 | Msa0172980:intron | 20.0% |
| !!! | TTACTAAACTTTTGCTTTTT+TGG | - | chr1_4:58176166-58176185 | Msa0172980:intron | 20.0% |
| !! | GATTTGTATGATATAGATAA+AGG | + | chr1_4:58176889-58176908 | None:intergenic | 20.0% |
| !!! | TTTTTTCAACAAGGTTTTGA+GGG | + | chr1_4:58173132-58173151 | None:intergenic | 25.0% |
| !!! | ATTTTTTCAACAAGGTTTTG+AGG | + | chr1_4:58173133-58173152 | None:intergenic | 25.0% |
| ! | AAAATCCGAAACTAAAAAGA+GGG | + | chr1_4:58173382-58173401 | None:intergenic | 25.0% |
| ! | TACTGATGTATATCATTATC+TGG | - | chr1_4:58173514-58173533 | Msa0172980:CDS | 25.0% |
| ! | ATAATGATTATAGGAAACTG+CGG | - | chr1_4:58173546-58173565 | Msa0172980:CDS | 25.0% |
| !!! | GTTCTTTCTTTTTTCTCTAT+TGG | - | chr1_4:58173803-58173822 | Msa0172980:CDS | 25.0% |
| !! | TCTACTATCTTTTCTACTAT+AGG | + | chr1_4:58173886-58173905 | None:intergenic | 25.0% |
| !!! | TTGTCTTTTGTTTTCTTTGT+AGG | - | chr1_4:58174188-58174207 | Msa0172980:intron | 25.0% |
| ! | ACTGTAAACTAATCATACAA+GGG | + | chr1_4:58174282-58174301 | None:intergenic | 25.0% |
| ! | AACTGTAAACTAATCATACA+AGG | + | chr1_4:58174283-58174302 | None:intergenic | 25.0% |
| !!! | TTTTGTCATTTGTTTTTTGC+AGG | - | chr1_4:58174333-58174352 | Msa0172980:intron | 25.0% |
| ! | AAAAGTAGATTGCTTAAGAA+AGG | + | chr1_4:58174480-58174499 | None:intergenic | 25.0% |
| ! | TTGATTGTTGAATGGTTTAT+AGG | - | chr1_4:58174540-58174559 | Msa0172980:intron | 25.0% |
| ! | TGATCATTGAACTTTACTAT+AGG | + | chr1_4:58174916-58174935 | None:intergenic | 25.0% |
| ! | TAAATAGGATCATGATAACA+GGG | + | chr1_4:58175024-58175043 | None:intergenic | 25.0% |
| ! | ATAAATAGGATCATGATAAC+AGG | + | chr1_4:58175025-58175044 | None:intergenic | 25.0% |
| ! | GATCCTATTTATAGAAGATT+TGG | - | chr1_4:58175033-58175052 | Msa0172980:intron | 25.0% |
| !!! | TGCCTATTTTTTTTAATCTG+GGG | - | chr1_4:58175092-58175111 | Msa0172980:intron | 25.0% |
| ! | AACCCCAGATTAAAAAAAAT+AGG | + | chr1_4:58175097-58175116 | None:intergenic | 25.0% |
| !!! | TGTTTCCTTTTTTAAAGCTT+CGG | + | chr1_4:58175260-58175279 | None:intergenic | 25.0% |
| ! | CCTGTATTTCATAAAAATTG+GGG | - | chr1_4:58175359-58175378 | Msa0172980:intron | 25.0% |
| ! | CTGTATTTCATAAAAATTGG+GGG | - | chr1_4:58175360-58175379 | Msa0172980:intron | 25.0% |
| ! | TGTATTTCATAAAAATTGGG+GGG | - | chr1_4:58175361-58175380 | Msa0172980:intron | 25.0% |
| ! | ATTAAAATACGTTTCAGAAG+TGG | - | chr1_4:58175428-58175447 | Msa0172980:CDS | 25.0% |
| !!! | AAGTTCAGATTTTCAAGAAT+GGG | + | chr1_4:58175492-58175511 | None:intergenic | 25.0% |
| !!! | AAAGTTCAGATTTTCAAGAA+TGG | + | chr1_4:58175493-58175512 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTATAACTGTTCA+AGG | + | chr1_4:58175563-58175582 | None:intergenic | 25.0% |
| ! | TATCTCAGTTACATATTTGA+CGG | + | chr1_4:58175624-58175643 | None:intergenic | 25.0% |
| ! | CATTTAACTCAAAAAAACCA+CGG | + | chr1_4:58176108-58176127 | None:intergenic | 25.0% |
| !!! | AACGGAGAATTTTTTCAACA+AGG | + | chr1_4:58173141-58173160 | None:intergenic | 30.0% |
| TATTGGAAAGAACAATGCTT+CGG | - | chr1_4:58173181-58173200 | Msa0172980:three_prime_UTR | 30.0% | |
| !!! | AATTCCCCTCTTTTTAGTTT+CGG | - | chr1_4:58173374-58173393 | Msa0172980:CDS | 30.0% |
| AAATCCGAAACTAAAAAGAG+GGG | + | chr1_4:58173381-58173400 | None:intergenic | 30.0% | |
| GAAAATCCGAAACTAAAAAG+AGG | + | chr1_4:58173383-58173402 | None:intergenic | 30.0% | |
| ! | TTAGTTTCGGATTTTCATTC+TGG | - | chr1_4:58173387-58173406 | Msa0172980:CDS | 30.0% |
| ! | TAGTTTCGGATTTTCATTCT+GGG | - | chr1_4:58173388-58173407 | Msa0172980:CDS | 30.0% |
| AGCCGTTGTATAATGATTAT+AGG | - | chr1_4:58173537-58173556 | Msa0172980:CDS | 30.0% | |
| ! | TAATACCTTTTCTTAATCCG+CGG | + | chr1_4:58173768-58173787 | None:intergenic | 30.0% |
| !! | GTTTAGTTATTTTGCTTGCT+CGG | - | chr1_4:58173829-58173848 | Msa0172980:intron | 30.0% |
| AACAACATTAGATAGAGAGT+TGG | - | chr1_4:58173853-58173872 | Msa0172980:intron | 30.0% | |
| ACAACATTAGATAGAGAGTT+GGG | - | chr1_4:58173854-58173873 | Msa0172980:intron | 30.0% | |
| GTTTCGCTAATAGTATTTCT+AGG | + | chr1_4:58174015-58174034 | None:intergenic | 30.0% | |
| ! | TGGTTTTTGATAGAAGACTA+TGG | - | chr1_4:58174075-58174094 | Msa0172980:intron | 30.0% |
| !! | TTTGTAGGATTTTGAGTAGT+AGG | - | chr1_4:58174203-58174222 | Msa0172980:intron | 30.0% |
| GTTTATAGGATTATCATCGT+GGG | - | chr1_4:58174554-58174573 | Msa0172980:intron | 30.0% | |
| !! | AATAAAAAGAAGTACCAGGA+TGG | + | chr1_4:58174712-58174731 | None:intergenic | 30.0% |
| !! | AGCAAATAAAAAGAAGTACC+AGG | + | chr1_4:58174716-58174735 | None:intergenic | 30.0% |
| TTATACATCTATTTCCACTG+CGG | - | chr1_4:58174858-58174877 | Msa0172980:intron | 30.0% | |
| ATCAAACAGTTATGTTGCAT+TGG | - | chr1_4:58174990-58175009 | Msa0172980:intron | 30.0% | |
| ATAGTCATAATTCAACCAAG+TGG | + | chr1_4:58175135-58175154 | None:intergenic | 30.0% | |
| TATGACTATTGAACATCCAT+TGG | - | chr1_4:58175146-58175165 | Msa0172980:intron | 30.0% | |
| CATCAAATTAAACTCTCCAA+TGG | + | chr1_4:58175165-58175184 | None:intergenic | 30.0% | |
| !! | TTCTTCCGAAGCTTTAAAAA+AGG | - | chr1_4:58175252-58175271 | Msa0172980:intron | 30.0% |
| ! | CCCCAATTTTTATGAAATAC+AGG | + | chr1_4:58175362-58175381 | None:intergenic | 30.0% |
| !!! | GTATTTTAATGCCCAAAAGT+TGG | + | chr1_4:58175418-58175437 | None:intergenic | 30.0% |
| TACTAACATGCTGATATAGA+GGG | + | chr1_4:58175594-58175613 | None:intergenic | 30.0% | |
| CATGCACATATACATCTAAA+TGG | - | chr1_4:58175734-58175753 | Msa0172980:intron | 30.0% | |
| ! | AATTTCTCTCCTTGTGATTT+TGG | - | chr1_4:58175893-58175912 | Msa0172980:intron | 30.0% |
| !!! | CGTGGTTTTTTTGAGTTAAA+TGG | - | chr1_4:58176106-58176125 | Msa0172980:intron | 30.0% |
| !!! | TTTTTTGGTGTCCTTTTCAT+AGG | - | chr1_4:58176181-58176200 | Msa0172980:intron | 30.0% |
| !!! | TTTTTGGTGTCCTTTTCATA+GGG | - | chr1_4:58176182-58176201 | Msa0172980:intron | 30.0% |
| ! | TTCTTTTCCTTCTTCTTCTT+TGG | + | chr1_4:58176546-58176565 | None:intergenic | 30.0% |
| GAAGGAAAAGAAAGAAAAGA+AGG | - | chr1_4:58176554-58176573 | Msa0172980:intron | 30.0% | |
| GAAAGAAAAGAAGGAAAAGA+AGG | - | chr1_4:58176563-58176582 | Msa0172980:intron | 30.0% | |
| ATACAAGTATGTACTTGTGT+AGG | - | chr1_4:58176815-58176834 | Msa0172980:CDS | 30.0% | |
| ! | AGAGTGTTCAATTGATGTAA+TGG | - | chr1_4:58176923-58176942 | Msa0172980:CDS | 30.0% |
| TCTATTGGTACTCTGATAAA+AGG | - | chr1_4:58176952-58176971 | Msa0172980:five_prime_UTR | 30.0% | |
| AAAGGAAAAGAAAAACGTTG+TGG | - | chr1_4:58176970-58176989 | Msa0172980:five_prime_UTR | 30.0% | |
| !!! | AAAACTACATCGTTTTGGAG+AGG | - | chr1_4:58173006-58173025 | Msa0172980:three_prime_UTR | 35.0% |
| AATCGTGATGAATTGGATGA+TGG | + | chr1_4:58173055-58173074 | None:intergenic | 35.0% | |
| ! | TGTGCTGATAGATCTTTGAA+CGG | + | chr1_4:58173159-58173178 | None:intergenic | 35.0% |
| AGATCTATCAGCACACATAT+TGG | - | chr1_4:58173164-58173183 | Msa0172980:three_prime_UTR | 35.0% | |
| TTCGATGACGATTTCTTTCT+CGG | + | chr1_4:58173329-58173348 | None:intergenic | 35.0% | |
| TTGAAAAATGCAGGTATGTG+AGG | - | chr1_4:58173453-58173472 | Msa0172980:CDS | 35.0% | |
| CAACATTAGATAGAGAGTTG+GGG | - | chr1_4:58173855-58173874 | Msa0172980:intron | 35.0% | |
| TAGTAGAAACTAGACTTCAG+TGG | - | chr1_4:58173899-58173918 | Msa0172980:intron | 35.0% | |
| AAACTAGACTTCAGTGGTTT+GGG | - | chr1_4:58173905-58173924 | Msa0172980:intron | 35.0% | |
| AGATCTAGAGATCAATGAGT+TGG | - | chr1_4:58174043-58174062 | Msa0172980:intron | 35.0% | |
| GTAAACTAATCATACAAGGG+AGG | + | chr1_4:58174279-58174298 | None:intergenic | 35.0% | |
| !!! | TGTCATTTGTTTTTTGCAGG+TGG | - | chr1_4:58174336-58174355 | Msa0172980:intron | 35.0% |
| TGAATGTGATTCTGATGTTC+TGG | - | chr1_4:58174516-58174535 | Msa0172980:intron | 35.0% | |
| !! | GTTCTGGTTTGATTGTTGAA+TGG | - | chr1_4:58174532-58174551 | Msa0172980:intron | 35.0% |
| GGTTTATAGGATTATCATCG+TGG | - | chr1_4:58174553-58174572 | Msa0172980:intron | 35.0% | |
| GAAGTAACAGCACATTTACA+AGG | + | chr1_4:58174649-58174668 | None:intergenic | 35.0% | |
| AGGATGGCTATTTAAATGAC+GGG | + | chr1_4:58174696-58174715 | None:intergenic | 35.0% | |
| CAGGATGGCTATTTAAATGA+CGG | + | chr1_4:58174697-58174716 | None:intergenic | 35.0% | |
| ! | TTGTGCATGAGTGTATCTTT+TGG | - | chr1_4:58174758-58174777 | Msa0172980:intron | 35.0% |
| ! | TGTGCATGAGTGTATCTTTT+GGG | - | chr1_4:58174759-58174778 | Msa0172980:intron | 35.0% |
| !! | TGTATCTTTTGGGTCTATGT+TGG | - | chr1_4:58174769-58174788 | Msa0172980:intron | 35.0% |
| AAGCAGTTGTATACCACAAA+TGG | + | chr1_4:58174893-58174912 | None:intergenic | 35.0% | |
| GCGATATTATCTTTATGCGA+AGG | - | chr1_4:58175383-58175402 | Msa0172980:intron | 35.0% | |
| TTAATGCCCAAAAGTTGGAT+AGG | + | chr1_4:58175413-58175432 | None:intergenic | 35.0% | |
| GAGATTCCTAGCATATCATA+AGG | - | chr1_4:58175464-58175483 | Msa0172980:intron | 35.0% | |
| ! | CACAAGAGTGTGAAAAACAT+AGG | - | chr1_4:58175513-58175532 | Msa0172980:intron | 35.0% |
| GTACTAACATGCTGATATAG+AGG | + | chr1_4:58175595-58175614 | None:intergenic | 35.0% | |
| !!! | GTTTTTTGTTTGAGGCATTG+TGG | - | chr1_4:58175666-58175685 | Msa0172980:intron | 35.0% |
| GCACATATACATCTAAATGG+TGG | - | chr1_4:58175737-58175756 | Msa0172980:intron | 35.0% | |
| CATCTAAATGGTGGTAAAGT+TGG | - | chr1_4:58175746-58175765 | Msa0172980:intron | 35.0% | |
| ! | GATTTGCTCTTCGTAGTATA+AGG | + | chr1_4:58175931-58175950 | None:intergenic | 35.0% |
| CATATATTTGGCGGAAATCA+CGG | + | chr1_4:58175982-58176001 | None:intergenic | 35.0% | |
| AAGAAGGAAAAGAAGGATGA+CGG | - | chr1_4:58176570-58176589 | Msa0172980:intron | 35.0% | |
| AGTTCAGATCACATCTTAAG+TGG | + | chr1_4:58176660-58176679 | None:intergenic | 35.0% | |
| AAGATGTGATCTGAACTGTA+TGG | - | chr1_4:58176663-58176682 | Msa0172980:CDS | 35.0% | |
| TGAACTGTATGGCTTGAATT+TGG | - | chr1_4:58176674-58176693 | Msa0172980:CDS | 35.0% | |
| AGGCAATCAAAACAACTCTA+TGG | + | chr1_4:58176869-58176888 | None:intergenic | 35.0% | |
| ATGTAATGGCTTGAGTCTAT+TGG | - | chr1_4:58176937-58176956 | Msa0172980:exon | 35.0% | |
| !!! | ACATCGTTTTGGAGAGGATT+AGG | - | chr1_4:58173012-58173031 | Msa0172980:three_prime_UTR | 40.0% |
| !!! | CATCGTTTTGGAGAGGATTA+GGG | - | chr1_4:58173013-58173032 | Msa0172980:three_prime_UTR | 40.0% |
| GGTTGTGAATCGTGATGAAT+TGG | + | chr1_4:58173062-58173081 | None:intergenic | 40.0% | |
| TTCATCACGATTCACAACCA+TGG | - | chr1_4:58173063-58173082 | Msa0172980:three_prime_UTR | 40.0% | |
| AGAACAATGCTTCGGCTTAA+CGG | - | chr1_4:58173189-58173208 | Msa0172980:three_prime_UTR | 40.0% | |
| !! | TCTGAAGCATTTTCATGACG+AGG | + | chr1_4:58173300-58173319 | None:intergenic | 40.0% |
| TCGATGACGATTTCTTTCTC+GGG | + | chr1_4:58173328-58173347 | None:intergenic | 40.0% | |
| GCATTCTATTTGCGTCTTAC+TGG | - | chr1_4:58173485-58173504 | Msa0172980:CDS | 40.0% | |
| ATGATTATAGGAAACTGCGG+CGG | - | chr1_4:58173549-58173568 | Msa0172980:CDS | 40.0% | |
| CTCAATAACTTACGTCCATC+CGG | + | chr1_4:58173581-58173600 | None:intergenic | 40.0% | |
| TGCTTTGACACATGTTGATG+AGG | - | chr1_4:58173695-58173714 | Msa0172980:CDS | 40.0% | |
| GAAACTAGACTTCAGTGGTT+TGG | - | chr1_4:58173904-58173923 | Msa0172980:intron | 40.0% | |
| GCATGTAGAGAGAAAACTTG+TGG | - | chr1_4:58173927-58173946 | Msa0172980:intron | 40.0% | |
| GGTAAGGAGAGTAAATCAGA+TGG | - | chr1_4:58173957-58173976 | Msa0172980:intron | 40.0% | |
| AAGGAGAGTAAATCAGATGG+AGG | - | chr1_4:58173960-58173979 | Msa0172980:intron | 40.0% | |
| AGGAGAGTAAATCAGATGGA+GGG | - | chr1_4:58173961-58173980 | Msa0172980:intron | 40.0% | |
| ! | CAATGAGTTGGAGAAACACA+TGG | - | chr1_4:58174055-58174074 | Msa0172980:intron | 40.0% |
| ! | GGATAAGGCTTGGTTATTGT+CGG | - | chr1_4:58174133-58174152 | Msa0172980:intron | 40.0% |
| TACTCTGTGCTTTGCATGAT+AGG | - | chr1_4:58174160-58174179 | Msa0172980:intron | 40.0% | |
| !! | AGGATTTTGAGTAGTAGGTG+AGG | - | chr1_4:58174208-58174227 | Msa0172980:intron | 40.0% |
| TGCACTTTGTCTAGGTTCTA+AGG | + | chr1_4:58174381-58174400 | None:intergenic | 40.0% | |
| TCTTCAAGTGCACTTTGTCT+AGG | + | chr1_4:58174389-58174408 | None:intergenic | 40.0% | |
| TAGACAAAGTGCACTTGAAG+AGG | - | chr1_4:58174388-58174407 | Msa0172980:intron | 40.0% | |
| ! | TGCACTTGAAGAGGATTTTG+AGG | - | chr1_4:58174397-58174416 | Msa0172980:intron | 40.0% |
| !! | ACTTGAAGAGGATTTTGAGG+AGG | - | chr1_4:58174400-58174419 | Msa0172980:intron | 40.0% |
| CGTCATTTAAATAGCCATCC+TGG | - | chr1_4:58174695-58174714 | Msa0172980:intron | 40.0% | |
| ! | TGTGCAGTTGAGAAGTATGA+TGG | - | chr1_4:58174967-58174986 | Msa0172980:intron | 40.0% |
| TATCTTCAGTTGTCGAAGTG+CGG | - | chr1_4:58175301-58175320 | Msa0172980:intron | 40.0% | |
| TGGGAACCTTATGATATGCT+AGG | + | chr1_4:58175473-58175492 | None:intergenic | 40.0% | |
| ATAACTGTTCAAGGACTGCA+GGG | + | chr1_4:58175554-58175573 | None:intergenic | 40.0% | |
| TATAACTGTTCAAGGACTGC+AGG | + | chr1_4:58175555-58175574 | None:intergenic | 40.0% | |
| !!! | TTTTGTTTGAGGCATTGTGG+TGG | - | chr1_4:58175669-58175688 | Msa0172980:intron | 40.0% |
| ! | GTCTTGTTCTGTTTATCGTC+AGG | - | chr1_4:58175867-58175886 | Msa0172980:intron | 40.0% |
| ! | TCTCCTTGTGATTTTGGATG+AGG | - | chr1_4:58175899-58175918 | Msa0172980:intron | 40.0% |
| ! | CTCCTTGTGATTTTGGATGA+GGG | - | chr1_4:58175900-58175919 | Msa0172980:intron | 40.0% |
| TTCCCTCATCCAAAATCACA+AGG | + | chr1_4:58175905-58175924 | None:intergenic | 40.0% | |
| AACTGAAATGTACTGTGTCG+TGG | - | chr1_4:58176034-58176053 | Msa0172980:intron | 40.0% | |
| TCGTGTGATATAGCATCACT+TGG | - | chr1_4:58176075-58176094 | Msa0172980:intron | 40.0% | |
| TAGTCACGATCCCTATGAAA+AGG | + | chr1_4:58176195-58176214 | None:intergenic | 40.0% | |
| ACAGAGATAGGGAAAAGGAA+AGG | - | chr1_4:58176277-58176296 | Msa0172980:CDS | 40.0% | |
| CAGAGATAGGGAAAAGGAAA+GGG | - | chr1_4:58176278-58176297 | Msa0172980:CDS | 40.0% | |
| AAAAGGAAAGGGACAGAGAT+AGG | - | chr1_4:58176289-58176308 | Msa0172980:CDS | 40.0% | |
| AAAGGAAAGGGACAGAGATA+GGG | - | chr1_4:58176290-58176309 | Msa0172980:CDS | 40.0% | |
| TTTCTTCCCTCAGACGATAT+CGG | + | chr1_4:58176329-58176348 | None:intergenic | 40.0% | |
| ATATCGTCTGAGGGAAGAAA+AGG | - | chr1_4:58176329-58176348 | Msa0172980:intron | 40.0% | |
| CTGAGGGAAGAAAAGGATTA+TGG | - | chr1_4:58176336-58176355 | Msa0172980:intron | 40.0% | |
| AGAAGGAAAAGAAGGATGAC+GGG | - | chr1_4:58176571-58176590 | Msa0172980:intron | 40.0% | |
| TGTATGGCTTGAATTTGGAC+TGG | - | chr1_4:58176679-58176698 | Msa0172980:CDS | 40.0% | |
| GTATGGCTTGAATTTGGACT+GGG | - | chr1_4:58176680-58176699 | Msa0172980:CDS | 40.0% | |
| AACACTCTAGTTGTCAGTAC+AGG | + | chr1_4:58176911-58176930 | None:intergenic | 40.0% | |
| TTCATGACGAGGCACATGAA+GGG | + | chr1_4:58173289-58173308 | None:intergenic | 45.0% | |
| TTTCATGACGAGGCACATGA+AGG | + | chr1_4:58173290-58173309 | None:intergenic | 45.0% | |
| ATGCAGGTATGTGAGGATAC+TGG | - | chr1_4:58173460-58173479 | Msa0172980:CDS | 45.0% | |
| TGCAGGTATGTGAGGATACT+GGG | - | chr1_4:58173461-58173480 | Msa0172980:CDS | 45.0% | |
| ! | CTATGCCGCGGATTAAGAAA+AGG | - | chr1_4:58173760-58173779 | Msa0172980:CDS | 45.0% |
| GAGAAAACTTGTGGATGCTG+CGG | - | chr1_4:58173936-58173955 | Msa0172980:intron | 45.0% | |
| GGAGAGTAAATCAGATGGAG+GGG | - | chr1_4:58173962-58173981 | Msa0172980:intron | 45.0% | |
| GGTGTCAAATCACTAGAGGT+AGG | - | chr1_4:58173983-58174002 | Msa0172980:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1_4:58174124-58174143 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1_4:58174125-58174144 | None:intergenic | 45.0% |
| GAGGATAGAGAGCAAGACAA+AGG | + | chr1_4:58174260-58174279 | None:intergenic | 45.0% | |
| ! | AGGTGGACTCTTGAATCTCT+TGG | - | chr1_4:58174353-58174372 | Msa0172980:intron | 45.0% |
| !! | AGAGGATTTTGAGGAGGAAG+AGG | - | chr1_4:58174406-58174425 | Msa0172980:intron | 45.0% |
| !! | AGAAAGGAAAGCACCTTCTC+AGG | + | chr1_4:58174464-58174483 | None:intergenic | 45.0% |
| GACGTGATAGTCATAGACAC+AGG | - | chr1_4:58174611-58174630 | Msa0172980:intron | 45.0% | |
| ACATAGTGTGTGTGTGAGCA+GGG | + | chr1_4:58174820-58174839 | None:intergenic | 45.0% | |
| TACATAGTGTGTGTGTGAGC+AGG | + | chr1_4:58174821-58174840 | None:intergenic | 45.0% | |
| CAATGATCAATGATCCTGCC+AGG | - | chr1_4:58174927-58174946 | Msa0172980:intron | 45.0% | |
| ! | AGGCCATCCTATCCAACTTT+TGG | - | chr1_4:58175403-58175422 | Msa0172980:CDS | 45.0% |
| ! | GGCCATCCTATCCAACTTTT+GGG | - | chr1_4:58175404-58175423 | Msa0172980:CDS | 45.0% |
| TGCCCAAAAGTTGGATAGGA+TGG | + | chr1_4:58175409-58175428 | None:intergenic | 45.0% | |
| !! | GGTGGTAAAGTTGGTACTGA+TGG | - | chr1_4:58175755-58175774 | Msa0172980:intron | 45.0% |
| AGAGATTATGACAGAGAGCG+TGG | - | chr1_4:58176231-58176250 | Msa0172980:intron | 45.0% | |
| ATAGAGATCGGGACAGAGAT+AGG | - | chr1_4:58176265-58176284 | Msa0172980:CDS | 45.0% | |
| TAGAGATCGGGACAGAGATA+GGG | - | chr1_4:58176266-58176285 | Msa0172980:CDS | 45.0% | |
| GATTATGGTCGTGAGAGAGA+AGG | - | chr1_4:58176351-58176370 | Msa0172980:intron | 45.0% | |
| AAGGAGTCGAAGTAGAAGCA+GGG | - | chr1_4:58176431-58176450 | Msa0172980:intron | 45.0% | |
| ATCGCAAGGAACATGATGGT+GGG | - | chr1_4:58176454-58176473 | Msa0172980:CDS | 45.0% | |
| AGCGTAAGTCCTAGAAGAGA+TGG | - | chr1_4:58176504-58176523 | Msa0172980:CDS | 45.0% | |
| TGGTGAGCCAAAGAAGAAGA+AGG | - | chr1_4:58176536-58176555 | Msa0172980:CDS | 45.0% | |
| AATCTCTGGATCTGGATGGT+CGG | + | chr1_4:58176598-58176617 | None:intergenic | 45.0% | |
| CTGTTTGCTTCTGCAATCTC+TGG | + | chr1_4:58176612-58176631 | None:intergenic | 45.0% | |
| CAGAGATTGCAGAAGCAAAC+AGG | - | chr1_4:58176610-58176629 | Msa0172980:intron | 45.0% | |
| AAACAGGATACGAGCATCAC+TGG | - | chr1_4:58176626-58176645 | Msa0172980:intron | 45.0% | |
| AACAGGATACGAGCATCACT+GGG | - | chr1_4:58176627-58176646 | Msa0172980:intron | 45.0% | |
| GGACTGGGTTACAAAAGACA+AGG | - | chr1_4:58176695-58176714 | Msa0172980:CDS | 45.0% | |
| GGCAATAGCATGTTACCTCA+AGG | - | chr1_4:58176716-58176735 | Msa0172980:CDS | 45.0% | |
| GTCAAACGTCACAAACCTTG+AGG | + | chr1_4:58176734-58176753 | None:intergenic | 45.0% | |
| ! | AGTTTTTGTACTGCCCTGAG+CGG | - | chr1_4:58176762-58176781 | Msa0172980:CDS | 45.0% |
| GAATTGACAATTGCCGCTCA+GGG | + | chr1_4:58176778-58176797 | None:intergenic | 45.0% | |
| TGAATTGACAATTGCCGCTC+AGG | + | chr1_4:58176779-58176798 | None:intergenic | 45.0% | |
| GCGGCAATTGTCAATTCAAC+AGG | - | chr1_4:58176781-58176800 | Msa0172980:CDS | 45.0% | |
| ATGTACTTGTGTAGGTGCAG+CGG | - | chr1_4:58176823-58176842 | Msa0172980:CDS | 45.0% | |
| CACTGCTCTTGCGATATGAA+TGG | - | chr1_4:58176993-58177012 | Msa0172980:five_prime_UTR | 45.0% | |
| TGGATCAGTGCGATTTGCCA+TGG | + | chr1_4:58173083-58173102 | None:intergenic | 50.0% | |
| AACCCTAGTCGACAAAGCCA+TGG | - | chr1_4:58173216-58173235 | Msa0172980:three_prime_UTR | 50.0% | |
| !! | CTCCATGGCTTTGTCGACTA+GGG | + | chr1_4:58173221-58173240 | None:intergenic | 50.0% |
| ! | ACATGAAGGGAGTGGGTTTC+CGG | + | chr1_4:58173276-58173295 | None:intergenic | 50.0% |
| GAAACTGCGGCGGAAATTAC+CGG | - | chr1_4:58173559-58173578 | Msa0172980:CDS | 50.0% | |
| GCTGTGATATTGCTATGCCG+CGG | - | chr1_4:58173748-58173767 | Msa0172980:CDS | 50.0% | |
| AACTTGTGGATGCTGCGGTA+AGG | - | chr1_4:58173941-58173960 | Msa0172980:intron | 50.0% | |
| !! | GAGGGGTGTCAAATCACTAG+AGG | - | chr1_4:58173979-58173998 | Msa0172980:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1_4:58174120-58174139 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1_4:58174126-58174145 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1_4:58174123-58174142 | Msa0172980:intron | 50.0% | |
| TGAGGAGGAAGAGGAGAATG+AGG | - | chr1_4:58174415-58174434 | Msa0172980:intron | 50.0% | |
| GGATAATGAACAGCCTGCTG+AGG | - | chr1_4:58174436-58174455 | Msa0172980:intron | 50.0% | |
| CCCTATCTCTTTCCCTTGCA+GGG | + | chr1_4:58174585-58174604 | None:intergenic | 50.0% | |
| CCCTGCAAGGGAAAGAGATA+GGG | - | chr1_4:58174582-58174601 | Msa0172980:intron | 50.0% | |
| TCCCTATCTCTTTCCCTTGC+AGG | + | chr1_4:58174586-58174605 | None:intergenic | 50.0% | |
| AATGGCTCTTTATGCCGCAG+TGG | + | chr1_4:58174875-58174894 | None:intergenic | 50.0% | |
| GCGGCATAAAGAGCCATTTG+TGG | - | chr1_4:58174877-58174896 | Msa0172980:intron | 50.0% | |
| ACTGTCAGTGCAGAGAAACC+TGG | + | chr1_4:58174948-58174967 | None:intergenic | 50.0% | |
| ! | GTACTGTGTCGTGGTTTTCG+TGG | - | chr1_4:58176043-58176062 | Msa0172980:intron | 50.0% |
| CATCACTTGGATAACGTCCG+TGG | - | chr1_4:58176088-58176107 | Msa0172980:intron | 50.0% | |
| CTCTGTCCCGATCTCTATCT+CGG | + | chr1_4:58176263-58176282 | None:intergenic | 50.0% | |
| TCGGGACAGAGATAGGGAAA+AGG | - | chr1_4:58176272-58176291 | Msa0172980:CDS | 50.0% | |
| AAAGGGACAGAGATAGGGAG+AGG | - | chr1_4:58176295-58176314 | Msa0172980:CDS | 50.0% | |
| AAGGGACAGAGATAGGGAGA+GGG | - | chr1_4:58176296-58176315 | Msa0172980:CDS | 50.0% | |
| ACAGAGACCGATATCGTCTG+AGG | - | chr1_4:58176319-58176338 | Msa0172980:CDS | 50.0% | |
| CAGAGACCGATATCGTCTGA+GGG | - | chr1_4:58176320-58176339 | Msa0172980:CDS | 50.0% | |
| CAAGGAGTCGAAGTAGAAGC+AGG | - | chr1_4:58176430-58176449 | Msa0172980:intron | 50.0% | |
| AAGTAGAAGCAGGGATCGCA+AGG | - | chr1_4:58176440-58176459 | Msa0172980:intron | 50.0% | |
| AGGGATCGCAAGGAACATGA+TGG | - | chr1_4:58176450-58176469 | Msa0172980:CDS | 50.0% | |
| GATCGCAAGGAACATGATGG+TGG | - | chr1_4:58176453-58176472 | Msa0172980:CDS | 50.0% | |
| ! | TCGCAAGGAACATGATGGTG+GGG | - | chr1_4:58176455-58176474 | Msa0172980:CDS | 50.0% |
| TCCTAGAAGAGATGGAGCTG+AGG | - | chr1_4:58176512-58176531 | Msa0172980:CDS | 50.0% | |
| TCCTCAGCTCCATCTCTTCT+AGG | + | chr1_4:58176516-58176535 | None:intergenic | 50.0% | |
| AGAAGAGATGGAGCTGAGGA+TGG | - | chr1_4:58176516-58176535 | Msa0172980:CDS | 50.0% | |
| CTGCAATCTCTGGATCTGGA+TGG | + | chr1_4:58176602-58176621 | None:intergenic | 50.0% | |
| GCTTCTGCAATCTCTGGATC+TGG | + | chr1_4:58176606-58176625 | None:intergenic | 50.0% | |
| !! | GCTCCATGGCTTTGTCGACT+AGG | + | chr1_4:58173222-58173241 | None:intergenic | 55.0% |
| ACGAGGCACATGAAGGGAGT+GGG | + | chr1_4:58173283-58173302 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr1_4:58174111-58174130 | Msa0172980:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr1_4:58174112-58174131 | Msa0172980:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1_4:58174118-58174137 | Msa0172980:intron | 55.0% | |
| GCCCTGCAAGGGAAAGAGAT+AGG | - | chr1_4:58174581-58174600 | Msa0172980:intron | 55.0% | |
| TCAGTGCAGAGAAACCTGGC+AGG | + | chr1_4:58174944-58174963 | None:intergenic | 55.0% | |
| ! | TATGACAGAGAGCGTGGACG+TGG | - | chr1_4:58176237-58176256 | Msa0172980:intron | 55.0% |
| GACGTGGCCGAGATAGAGAT+CGG | - | chr1_4:58176253-58176272 | Msa0172980:CDS | 55.0% | |
| ACGTGGCCGAGATAGAGATC+GGG | - | chr1_4:58176254-58176273 | Msa0172980:CDS | 55.0% | |
| ATGGTCGTGAGAGAGAAGGC+AGG | - | chr1_4:58176355-58176374 | Msa0172980:intron | 55.0% | |
| TGGTCGTGAGAGAGAAGGCA+GGG | - | chr1_4:58176356-58176375 | Msa0172980:intron | 55.0% | |
| AGAGACAGAGATCGTGACCG+TGG | - | chr1_4:58176390-58176409 | Msa0172980:intron | 55.0% | |
| ACAGAGATCGTGACCGTGGT+AGG | - | chr1_4:58176394-58176413 | Msa0172980:intron | 55.0% | |
| AGTAGCTCCTCCTCCTACCA+CGG | + | chr1_4:58176410-58176429 | None:intergenic | 55.0% | |
| GTAGGAGGAGGAGCTACTCA+AGG | - | chr1_4:58176412-58176431 | Msa0172980:intron | 55.0% | |
| TGTAGGTGCAGCGGTATGCT+TGG | - | chr1_4:58176832-58176851 | Msa0172980:CDS | 55.0% | |
| CCTCGAATGCTCTTCGCTGC+TGG | + | chr1_4:58173103-58173122 | None:intergenic | 60.0% | |
| !! | CCAGCAGCGAAGAGCATTCG+AGG | - | chr1_4:58173100-58173119 | Msa0172980:three_prime_UTR | 60.0% |
| GACGAGGCACATGAAGGGAG+TGG | + | chr1_4:58173284-58173303 | None:intergenic | 60.0% | |
| CTGCGGCGGAAATTACCGGA+TGG | - | chr1_4:58173563-58173582 | Msa0172980:CDS | 60.0% | |
| ACCTTCTCAGGCTCCTCAGC+AGG | + | chr1_4:58174452-58174471 | None:intergenic | 60.0% | |
| GAGATCGTGACCGTGGTAGG+AGG | - | chr1_4:58176397-58176416 | Msa0172980:intron | 60.0% | |
| ATCGTGACCGTGGTAGGAGG+AGG | - | chr1_4:58176400-58176419 | Msa0172980:intron | 60.0% | |
| GCCATGGAGCTCGACCACCT+CGG | - | chr1_4:58173232-58173251 | Msa0172980:three_prime_UTR | 65.0% | |
| ATGGAGCTCGACCACCTCGG+CGG | - | chr1_4:58173235-58173254 | Msa0172980:three_prime_UTR | 65.0% | |
| GACCACCTCGGCGGCACTTA+CGG | - | chr1_4:58173244-58173263 | Msa0172980:three_prime_UTR | 65.0% | |
| GCGGCACTTACGGTGGCAAC+CGG | - | chr1_4:58173254-58173273 | Msa0172980:three_prime_UTR | 65.0% | |
| GCCTGCTGAGGAGCCTGAGA+AGG | - | chr1_4:58174448-58174467 | Msa0172980:intron | 65.0% | |
| ATCGTGGGCGAAGCCCTGCA+AGG | - | chr1_4:58174569-58174588 | Msa0172980:intron | 65.0% | |
| TCGTGGGCGAAGCCCTGCAA+GGG | - | chr1_4:58174570-58174589 | Msa0172980:intron | 65.0% | |
| GCCGAGGTGGTCGAGCTCCA+TGG | + | chr1_4:58173236-58173255 | None:intergenic | 70.0% | |
| ! | CACCGTAAGTGCCGCCGAGG+TGG | + | chr1_4:58173249-58173268 | None:intergenic | 70.0% |
| CACCTCGGCGGCACTTACGG+TGG | - | chr1_4:58173247-58173266 | Msa0172980:three_prime_UTR | 70.0% | |
| ! | TGCCACCGTAAGTGCCGCCG+AGG | + | chr1_4:58173252-58173271 | None:intergenic | 70.0% |
| ! | GAGAAGGCAGGGAGCGCGAG+AGG | - | chr1_4:58176367-58176386 | Msa0172980:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 58173002 | 58177031 | 58173002 | ID=Msa0172980;Name=Msa0172980 |
| chr1_4 | mRNA | 58173002 | 58177031 | 58173002 | ID=Msa0172980-mRNA-1;Parent=Msa0172980;Name=Msa0172980-mRNA-1;_AED=0.01;_eAED=0.01;_QI=80|1|1|1|1|1|6|360|385 |
| chr1_4 | exon | 58173002 | 58173830 | 58173002 | ID=Msa0172980-mRNA-1:exon:17902;Parent=Msa0172980-mRNA-1 |
| chr1_4 | exon | 58175401 | 58175471 | 58175401 | ID=Msa0172980-mRNA-1:exon:17901;Parent=Msa0172980-mRNA-1 |
| chr1_4 | exon | 58175564 | 58175678 | 58175564 | ID=Msa0172980-mRNA-1:exon:17900;Parent=Msa0172980-mRNA-1 |
| chr1_4 | exon | 58176252 | 58176342 | 58176252 | ID=Msa0172980-mRNA-1:exon:17899;Parent=Msa0172980-mRNA-1 |
| chr1_4 | exon | 58176446 | 58176567 | 58176446 | ID=Msa0172980-mRNA-1:exon:17898;Parent=Msa0172980-mRNA-1 |
| chr1_4 | exon | 58176662 | 58177031 | 58176662 | ID=Msa0172980-mRNA-1:exon:17897;Parent=Msa0172980-mRNA-1 |
| chr1_4 | five_prime_UTR | 58176952 | 58177031 | 58176952 | ID=Msa0172980-mRNA-1:five_prime_utr;Parent=Msa0172980-mRNA-1 |
| chr1_4 | CDS | 58176662 | 58176951 | 58176662 | ID=Msa0172980-mRNA-1:cds;Parent=Msa0172980-mRNA-1 |
| chr1_4 | CDS | 58176446 | 58176567 | 58176446 | ID=Msa0172980-mRNA-1:cds;Parent=Msa0172980-mRNA-1 |
| chr1_4 | CDS | 58176252 | 58176342 | 58176252 | ID=Msa0172980-mRNA-1:cds;Parent=Msa0172980-mRNA-1 |
| chr1_4 | CDS | 58175564 | 58175678 | 58175564 | ID=Msa0172980-mRNA-1:cds;Parent=Msa0172980-mRNA-1 |
| chr1_4 | CDS | 58175401 | 58175471 | 58175401 | ID=Msa0172980-mRNA-1:cds;Parent=Msa0172980-mRNA-1 |
| chr1_4 | CDS | 58173362 | 58173830 | 58173362 | ID=Msa0172980-mRNA-1:cds;Parent=Msa0172980-mRNA-1 |
| chr1_4 | three_prime_UTR | 58173002 | 58173361 | 58173002 | ID=Msa0172980-mRNA-1:three_prime_utr;Parent=Msa0172980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
