AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0190590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0190590 MtrunA17_Chr2g0280241 70.227 309 23 4 12 251 1 309 8.37e-128 364
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 70 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGATACATGAAGAAAA+AGG 0.225832 2_1:+6076440 Msa0190590:CDS
GAGCTAGATAAACGGGTTTC+AGG 0.242657 2_1:+6074563 Msa0190590:CDS
AGGGAACGCCGTGCTATTTA+TGG 0.264533 2_1:+6076374 Msa0190590:CDS
TGCAGCGATGGAGGCCTCTT+TGG 0.303890 2_1:-6076398 None:intergenic
GCATACTCAAGAAGGTTTAA+AGG 0.309265 2_1:+6074718 Msa0190590:CDS
CTTATGCTTAGATTTATCTT+TGG 0.322415 2_1:-6076582 None:intergenic
GTCTGAAAAGGAAGGTGTTC+TGG 0.328605 2_1:+6071831 Msa0190590:CDS
GCAGTGAGGAAACGTGAATT+TGG 0.368822 2_1:-6071886 None:intergenic
TTTGGCCGACTCCTTACATT+AGG 0.370196 2_1:-6071868 None:intergenic
GATTAGCTGCTATGCTTATG+AGG 0.374781 2_1:+6071785 Msa0190590:CDS
GAAGGCTCTTCATCAGGATT+AGG 0.382558 2_1:-6076335 None:intergenic
CTAAAATCCGGACTAGTAGA+AGG 0.420316 2_1:-6076353 None:intergenic
AGAATTGGAGCTAGATAAAC+GGG 0.421423 2_1:+6074556 Msa0190590:CDS
CCAATATGATTAGATGGATC+TGG 0.428255 2_1:+6071750 Msa0190590:intron
AAGAATTGGAGCTAGATAAA+CGG 0.432861 2_1:+6074555 Msa0190590:CDS
CTAGTAGAAGGCTCTTCATC+AGG 0.441144 2_1:-6076341 None:intergenic
AATTTATAAATATAAAAGTC+TGG 0.458437 2_1:+6070674 None:intergenic
GCGAGCGCGAGAGAAAGAAT+TGG 0.475950 2_1:+6074541 Msa0190590:CDS
ATAAAAGAAGTGATGACAAA+AGG 0.493587 2_1:+6074597 Msa0190590:CDS
TTTAAAGGATGAAGAGCTTG+AGG 0.497408 2_1:+6074733 Msa0190590:CDS
GCTTACTTTGTCTCTGTCTA+CGG 0.498356 2_1:-6070751 None:intergenic
TCATAAAAGCCACTCGGACA+AGG 0.500159 2_1:+6076538 Msa0190590:CDS
GTCTACGGTGGCACCGTCGA+AGG 0.506413 2_1:-6070736 None:intergenic
TGAAGAGCCTTCTACTAGTC+CGG 0.506801 2_1:+6076346 Msa0190590:CDS
ATCTTCAAAAGCCTAATGTA+AGG 0.513211 2_1:+6071857 Msa0190590:CDS
TTCCTCACTGCTACCGTACG+TGG 0.514157 2_1:+6071898 Msa0190590:CDS
GATTCATATGATTGCAGCGA+TGG 0.524208 2_1:-6076410 None:intergenic
GGCTCTTCATCAGGATTAGG+AGG 0.525929 2_1:-6076332 None:intergenic
GGTGGCACCGTCGAAGGGAT+CGG 0.528236 2_1:-6070730 None:intergenic
TGAGCATGAAGCAGAGGCAC+TGG 0.529655 2_1:-6074678 None:intergenic
ACCTTGTTGTACCCCACGTA+CGG 0.534701 2_1:-6071911 None:intergenic
CATAAAAGCCACTCGGACAA+GGG 0.539820 2_1:+6076539 Msa0190590:CDS
AGAAGCGCAGAAAGACATGC+CGG 0.545272 2_1:+6074641 Msa0190590:CDS
GCACGGCGTTCCCTAAAATC+CGG 0.547528 2_1:-6076365 None:intergenic
GAAGCGCAGAAAGACATGCC+GGG 0.550828 2_1:+6074642 Msa0190590:CDS
AAGTGATGACAAAAGGCATA+GGG 0.553113 2_1:+6074604 Msa0190590:CDS
CTTCATCAGGATTAGGAGGA+AGG 0.554907 2_1:-6076328 None:intergenic
ACAAGTAAACATCGACGCTA+AGG 0.556891 2_1:+6076626 Msa0190590:CDS
ATTGCGGCGGCAGTCTGAAA+AGG 0.556915 2_1:+6071819 Msa0190590:CDS
GAAGTGATGACAAAAGGCAT+AGG 0.568455 2_1:+6074603 Msa0190590:CDS
GAATACAAGCATACTCAAGA+AGG 0.571166 2_1:+6074710 Msa0190590:CDS
AGGGGCATTCTAAGAAGCAC+AGG 0.574142 2_1:+6076558 Msa0190590:CDS
TCTACGGTGGCACCGTCGAA+GGG 0.579463 2_1:-6070735 None:intergenic
GGTCCAAGGATGGATGAGAC+TGG 0.581999 2_1:+6076299 Msa0190590:intron
TCATATGATTGCAGCGATGG+AGG 0.583552 2_1:-6076407 None:intergenic
TCAGGATTAGGAGGAAGGTA+AGG 0.589024 2_1:-6076323 None:intergenic
ATTAGCTGCTATGCTTATGA+GGG 0.595844 2_1:+6071786 Msa0190590:CDS
TCCTCACTGCTACCGTACGT+GGG 0.598730 2_1:+6071899 Msa0190590:CDS
TGAGGGAAGCAGCTGAATTG+CGG 0.599933 2_1:+6071803 Msa0190590:CDS
TTTAGTTGAGCATGAAGCAG+AGG 0.601778 2_1:-6074684 None:intergenic
TAGAATGCCCCTTGTCCGAG+TGG 0.603867 2_1:-6076547 None:intergenic
CGGCGGCAGTCTGAAAAGGA+AGG 0.613557 2_1:+6071823 Msa0190590:CDS
GAGAACACCGATCCCTTCGA+CGG 0.618905 2_1:+6070723 Msa0190590:five_prime_UTR
ATCATATGAATCTTCTGAGG+AGG 0.623892 2_1:+6076421 Msa0190590:CDS
GTCTCATCATAAAAGCCACT+CGG 0.625919 2_1:+6076532 Msa0190590:CDS
GTCATATGAATCTTCTGAGG+AGG 0.629029 2_1:+6076475 Msa0190590:CDS
GGGAAGCAGCTGAATTGCGG+CGG 0.633649 2_1:+6071806 Msa0190590:CDS
AAAAGCCTAATGTAAGGAGT+CGG 0.635616 2_1:+6071863 Msa0190590:CDS
GCAATCATATGAATCTTCTG+AGG 0.635767 2_1:+6076418 Msa0190590:CDS
AAGCGCAGAAAGACATGCCG+GGG 0.637078 2_1:+6074643 Msa0190590:CDS
ATAAAAGCCACTCGGACAAG+GGG 0.643411 2_1:+6076540 Msa0190590:CDS
ACCGTACGTGGGGTACAACA+AGG 0.646023 2_1:+6071910 Msa0190590:CDS
CTGTCGAAGTAAATGAAATG+TGG 0.648233 2_1:+6074519 Msa0190590:CDS
TACTTTGTCTCTGTCTACGG+TGG 0.650096 2_1:-6070748 None:intergenic
TCTTTGGACCATAAATAGCA+CGG 0.652427 2_1:-6076382 None:intergenic
AGGAGCTACATGAAGAAAAG+CGG 0.660754 2_1:+6076495 Msa0190590:CDS
GTGCTATTTATGGTCCAAAG+AGG 0.666760 2_1:+6076384 Msa0190590:CDS
GCAGTCATATGAATCTTCTG+AGG 0.668869 2_1:+6076472 Msa0190590:CDS
CCTCACTGCTACCGTACGTG+GGG 0.692099 2_1:+6071900 Msa0190590:CDS
CCCCACGTACGGTAGCAGTG+AGG 0.779657 2_1:-6071900 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr2_1:6075091-6075110 Msa0190590:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr2_1:6075090-6075109 Msa0190590:intron 0.0%
!! AAGAAGTAAAAATAATTAAA+AGG - chr2_1:6073749-6073768 None:intergenic 10.0%
!!! AGAATAGATTTTATATAATT+AGG + chr2_1:6074127-6074146 Msa0190590:intron 10.0%
!!! TTTTATCATTATATGAGAAA+TGG + chr2_1:6072095-6072114 Msa0190590:intron 15.0%
!!! TTTTATATGATGTTTCAATA+TGG + chr2_1:6073127-6073146 Msa0190590:intron 15.0%
!!! TAGATTTTATATAATTAGGA+TGG + chr2_1:6074131-6074150 Msa0190590:intron 15.0%
!! CATTAATTAGATAAACTATT+AGG - chr2_1:6074459-6074478 None:intergenic 15.0%
!! AACAATTCAATAATGATATT+GGG - chr2_1:6075320-6075339 None:intergenic 15.0%
!! TAACAATTCAATAATGATAT+TGG - chr2_1:6075321-6075340 None:intergenic 15.0%
!! AATTAAAAAAGAAGAAGATT+TGG + chr2_1:6075394-6075413 Msa0190590:intron 15.0%
!! AAAATATAACTATATTAGCA+AGG - chr2_1:6075715-6075734 None:intergenic 15.0%
!!! ATTACTATTTTGCAAATTTA+AGG + chr2_1:6075989-6076008 Msa0190590:intron 15.0%
!!! ATACAATTTGGAATTGAAAT+AGG + chr2_1:6071460-6071479 Msa0190590:intron 20.0%
!! AAATTGAGAAACAAAATCTT+CGG - chr2_1:6071670-6071689 None:intergenic 20.0%
!! ATAAAACTTTCAAAGAAGAA+GGG - chr2_1:6072081-6072100 None:intergenic 20.0%
!!! AAGAAGTATCAAATGTTTTT+TGG + chr2_1:6073013-6073032 Msa0190590:intron 20.0%
!!! TAATTTTCAAATATAGCTGA+AGG + chr2_1:6073071-6073090 Msa0190590:intron 20.0%
!!! AATTTTCAAATATAGCTGAA+GGG + chr2_1:6073072-6073091 Msa0190590:intron 20.0%
!!! TTCCTTTGTTTAGAAAAAAT+AGG + chr2_1:6073516-6073535 Msa0190590:intron 20.0%
!!! TCCTTTGTTTAGAAAAAATA+GGG + chr2_1:6073517-6073536 Msa0190590:intron 20.0%
!! TTAAAAGGTCAATAAAATTG+AGG - chr2_1:6073734-6073753 None:intergenic 20.0%
!!! TAATGAAACTGAATTTCTTT+TGG + chr2_1:6074474-6074493 Msa0190590:intron 20.0%
!! ACAATTCAATAATGATATTG+GGG - chr2_1:6075319-6075338 None:intergenic 20.0%
!!! AATTGGTAGTATTTAATTTC+AGG - chr2_1:6075576-6075595 None:intergenic 20.0%
! GGAAGAAAAAAAAAATTCGT+CGG - chr2_1:6070783-6070802 None:intergenic 25.0%
!! TTTTTCTTCCCTGATTTAAT+GGG + chr2_1:6070815-6070834 Msa0190590:intron 25.0%
! TTGCAGATAGAAAAAATTAG+AGG - chr2_1:6070875-6070894 None:intergenic 25.0%
! TTTCTGTGTAATAATCATCA+TGG + chr2_1:6071136-6071155 Msa0190590:intron 25.0%
! TTTCTGTAGCAAAAGATAAA+AGG + chr2_1:6071210-6071229 Msa0190590:intron 25.0%
! TATTATAGCCTAAATGTCTT+TGG + chr2_1:6071430-6071449 Msa0190590:intron 25.0%
! ATTATAGCCTAAATGTCTTT+GGG + chr2_1:6071431-6071450 Msa0190590:intron 25.0%
! TGAAATAGGTATTTCTTTGT+AGG + chr2_1:6071474-6071493 Msa0190590:intron 25.0%
! GAAATAGGTATTTCTTTGTA+GGG + chr2_1:6071475-6071494 Msa0190590:intron 25.0%
!!! TTTTTCTGTTATGCTTTGTT+TGG - chr2_1:6071508-6071527 None:intergenic 25.0%
! TATGAATAGAAAAGACAGAA+TGG + chr2_1:6071567-6071586 Msa0190590:intron 25.0%
!!! ATTTTTTGCATTAAGAACTC+TGG + chr2_1:6071630-6071649 Msa0190590:intron 25.0%
!! ATTAAGAACTCTGGAAAATT+TGG + chr2_1:6071639-6071658 Msa0190590:intron 25.0%
!! AGTGTTCCTTAAATTGTTTT+TGG + chr2_1:6071727-6071746 Msa0190590:intron 25.0%
! TATTGGCCAAAAACAATTTA+AGG - chr2_1:6071736-6071755 None:intergenic 25.0%
!! CTATATTGTCCTATGTTTTA+TGG + chr2_1:6071979-6071998 Msa0190590:intron 25.0%
! GATAAAACTTTCAAAGAAGA+AGG - chr2_1:6072082-6072101 None:intergenic 25.0%
!!! TTTTTTTTTTGCATAAGCCA+TGG - chr2_1:6072208-6072227 None:intergenic 25.0%
!! GATCATTATTCACTTCTTTT+TGG + chr2_1:6072308-6072327 Msa0190590:intron 25.0%
!! CAAGCAAATTGTCATTTAAT+AGG + chr2_1:6073041-6073060 Msa0190590:intron 25.0%
! AAATTGAGGGAAAAATATTC+GGG - chr2_1:6073464-6073483 None:intergenic 25.0%
! CAAATTGAGGGAAAAATATT+CGG - chr2_1:6073465-6073484 None:intergenic 25.0%
!!! ACCCTATTTTTTCTAAACAA+AGG - chr2_1:6073521-6073540 None:intergenic 25.0%
! TTTGTGTTCACATTTCTTTA+TGG + chr2_1:6073852-6073871 Msa0190590:intron 25.0%
! TTACGAAAACTTCTCTTATT+TGG + chr2_1:6074175-6074194 Msa0190590:intron 25.0%
! CAAAAAAAAAATAGTGGCAA+GGG + chr2_1:6074318-6074337 Msa0190590:intron 25.0%
! ATAAAAGAAGTGATGACAAA+AGG + chr2_1:6074597-6074616 Msa0190590:CDS 25.0%
!! CTTAATTTTCAACTCAAGTT+CGG - chr2_1:6075015-6075034 None:intergenic 25.0%
! TATATATAGTTCGACTCATT+TGG + chr2_1:6075064-6075083 Msa0190590:intron 25.0%
!! TTTTATAACAACAGCACAAT+TGG - chr2_1:6075593-6075612 None:intergenic 25.0%
!!! TTGATAATGCATTAGGATTT+AGG - chr2_1:6075630-6075649 None:intergenic 25.0%
!!! TTTGCTATTGCGTAAATTTA+GGG - chr2_1:6075925-6075944 None:intergenic 25.0%
!!! TTTTGCTATTGCGTAAATTT+AGG - chr2_1:6075926-6075945 None:intergenic 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG - chr2_1:6076066-6076085 None:intergenic 25.0%
!!! TAAGCAAAACTTCACTTTTT+AGG - chr2_1:6076165-6076184 None:intergenic 25.0%
!! GTTTTGCTTATAATAGTGAT+CGG + chr2_1:6076175-6076194 Msa0190590:intron 25.0%
!!! CTTTAATTTCTTTAAAGCTG+AGG + chr2_1:6076232-6076251 Msa0190590:intron 25.0%
! CTTATGCTTAGATTTATCTT+TGG - chr2_1:6076585-6076604 None:intergenic 25.0%
! TAAGCATAAGAAAAAGAGAA+GGG + chr2_1:6076595-6076614 Msa0190590:CDS 25.0%
GAAGAAAAAGATTCGGAATT+GGG - chr2_1:6070804-6070823 None:intergenic 30.0%
AATCAGGGAAGAAAAAGATT+CGG - chr2_1:6070811-6070830 None:intergenic 30.0%
! CTTTTTCTTCCCTGATTTAA+TGG + chr2_1:6070814-6070833 Msa0190590:intron 30.0%
GAACTCAATCAAAGCTATAA+AGG - chr2_1:6070950-6070969 None:intergenic 30.0%
CTTTGATTGAGTTCGTATAA+TGG + chr2_1:6070956-6070975 Msa0190590:intron 30.0%
TCGTATAATGGTAGAATTCT+AGG + chr2_1:6070968-6070987 Msa0190590:intron 30.0%
CGTATAATGGTAGAATTCTA+GGG + chr2_1:6070969-6070988 Msa0190590:intron 30.0%
TTTGATCTTCCAACACATTA+GGG - chr2_1:6071077-6071096 None:intergenic 30.0%
! TTTTGATCTTCCAACACATT+AGG - chr2_1:6071078-6071097 None:intergenic 30.0%
AATGTGTTGGAAGATCAAAA+TGG + chr2_1:6071078-6071097 Msa0190590:intron 30.0%
ATGTGTTGGAAGATCAAAAT+GGG + chr2_1:6071079-6071098 Msa0190590:intron 30.0%
TTGGAAGAACTTACTAAAAC+AGG - chr2_1:6071330-6071349 None:intergenic 30.0%
AAAGTAGCACACAAGTATTA+GGG - chr2_1:6071409-6071428 None:intergenic 30.0%
AAAAGTAGCACACAAGTATT+AGG - chr2_1:6071410-6071429 None:intergenic 30.0%
! TTTGGGATTTGGATACAATT+TGG + chr2_1:6071448-6071467 Msa0190590:intron 30.0%
ACAAAGCATAACAGAAAAAG+CGG + chr2_1:6071509-6071528 Msa0190590:intron 30.0%
TATTCATACTAGTGGAAAGA+CGG - chr2_1:6071555-6071574 None:intergenic 30.0%
! GTCTTTTCTATTCATACTAG+TGG - chr2_1:6071563-6071582 None:intergenic 30.0%
TAGTAGTAGTAATAACCAGT+AGG + chr2_1:6071596-6071615 Msa0190590:intron 30.0%
AAATCATTCAAAGAACCTAC+TGG - chr2_1:6071614-6071633 None:intergenic 30.0%
! TTTTGGCCAATATGATTAGA+TGG + chr2_1:6071744-6071763 Msa0190590:intron 30.0%
ATCTTCAAAAGCCTAATGTA+AGG + chr2_1:6071857-6071876 Msa0190590:CDS 30.0%
! CTATCTAAAATTAGCGAGTA+AGG - chr2_1:6071941-6071960 None:intergenic 30.0%
! CGCTAATTTTAGATAGAGTT+TGG + chr2_1:6071945-6071964 Msa0190590:intron 30.0%
GTTTATCATTGTATGGAAAC+TGG + chr2_1:6072019-6072038 Msa0190590:intron 30.0%
CAGTTCTTATAGTATATCCA+TGG + chr2_1:6072188-6072207 Msa0190590:intron 30.0%
TGTATTAGAGAGAGATTCAT+AGG + chr2_1:6072247-6072266 Msa0190590:intron 30.0%
!!! TGGTTTTGTGCAAAATATCA+AGG + chr2_1:6072328-6072347 Msa0190590:intron 30.0%
!! GGTTTTGTGCAAAATATCAA+GGG + chr2_1:6072329-6072348 Msa0190590:intron 30.0%
GTATACATCCAGTACATAAT+TGG + chr2_1:6072469-6072488 Msa0190590:intron 30.0%
! AATGTGGGTTGCAAATTATA+TGG + chr2_1:6072540-6072559 Msa0190590:intron 30.0%
! AGGTTACACAATCATTGATT+AGG + chr2_1:6072570-6072589 Msa0190590:intron 30.0%
! ATCATTGATTAGGAAATCTG+TGG + chr2_1:6072580-6072599 Msa0190590:intron 30.0%
ATGCATATGTACCATAAACT+AGG + chr2_1:6072633-6072652 Msa0190590:intron 30.0%
TGTAACAACTTCCTAGTTTA+TGG - chr2_1:6072647-6072666 None:intergenic 30.0%
TGACCCAAATATTTGTACAA+GGG - chr2_1:6072735-6072754 None:intergenic 30.0%
ATGACCCAAATATTTGTACA+AGG - chr2_1:6072736-6072755 None:intergenic 30.0%
! TTCTCTAGTTTGATTCACAA+GGG + chr2_1:6072777-6072796 Msa0190590:intron 30.0%
GACATAGAATAACAATGGTT+TGG - chr2_1:6072934-6072953 None:intergenic 30.0%
TTTAGTGACAATTCATGCTT+TGG - chr2_1:6073210-6073229 None:intergenic 30.0%
AAAGCATGAATTGTCACTAA+AGG + chr2_1:6073209-6073228 Msa0190590:intron 30.0%
CGTATTAAATCATGAAGTTG+AGG + chr2_1:6073424-6073443 Msa0190590:intron 30.0%
! CGAATATTTTTCCCTCAATT+TGG + chr2_1:6073463-6073482 Msa0190590:intron 30.0%
ACCAAAAACATCCAAATTGA+GGG - chr2_1:6073477-6073496 None:intergenic 30.0%
TACCAAAAACATCCAAATTG+AGG - chr2_1:6073478-6073497 None:intergenic 30.0%
!!! TGGATGTTTTTGGTATACAA+AGG + chr2_1:6073483-6073502 Msa0190590:intron 30.0%
!!! GGATGTTTTTGGTATACAAA+GGG + chr2_1:6073484-6073503 Msa0190590:intron 30.0%
!!! GATGTTTTTGGTATACAAAG+GGG + chr2_1:6073485-6073504 Msa0190590:intron 30.0%
! TTTTGTAGAGAACCAAACAA+GGG - chr2_1:6073549-6073568 None:intergenic 30.0%
! TTTTTGTAGAGAACCAAACA+AGG - chr2_1:6073550-6073569 None:intergenic 30.0%
TTCAATAAACGAGCAAGTTT+AGG - chr2_1:6073879-6073898 None:intergenic 30.0%
ATAATTAGGATGGAGAGAAA+AGG + chr2_1:6074141-6074160 Msa0190590:intron 30.0%
TAATTAGGATGGAGAGAAAA+GGG + chr2_1:6074142-6074161 Msa0190590:intron 30.0%
! ACTTCTCTTATTTGGTTACA+TGG + chr2_1:6074183-6074202 Msa0190590:intron 30.0%
!! ACTTTTCTATTTAGCTCAGT+TGG + chr2_1:6074242-6074261 Msa0190590:intron 30.0%
GACAATGCATAATATATGCA+AGG + chr2_1:6074269-6074288 Msa0190590:intron 30.0%
!!! ATTTTTTTTTTGGTGGTGTC+CGG - chr2_1:6074310-6074329 None:intergenic 30.0%
CACCACCAAAAAAAAAATAG+TGG + chr2_1:6074312-6074331 Msa0190590:intron 30.0%
!!! TGCCACTATTTTTTTTTTGG+TGG - chr2_1:6074317-6074336 None:intergenic 30.0%
!!! CCTTGCCACTATTTTTTTTT+TGG - chr2_1:6074320-6074339 None:intergenic 30.0%
CCAAAAAAAAAATAGTGGCA+AGG + chr2_1:6074317-6074336 Msa0190590:intron 30.0%
AAGAATTGGAGCTAGATAAA+CGG + chr2_1:6074555-6074574 Msa0190590:CDS 30.0%
! AAACATCCAAAAGTATACGA+GGG - chr2_1:6074784-6074803 None:intergenic 30.0%
! AAAACATCCAAAAGTATACG+AGG - chr2_1:6074785-6074804 None:intergenic 30.0%
TTTCAGTCCTTGATACTATA+AGG + chr2_1:6074869-6074888 Msa0190590:intron 30.0%
TTCAGTCCTTGATACTATAA+GGG + chr2_1:6074870-6074889 Msa0190590:intron 30.0%
GGTAATTAATTCGTTGAACT+TGG + chr2_1:6074972-6074991 Msa0190590:intron 30.0%
CATGTATGTACCATCATAAA+AGG + chr2_1:6075347-6075366 Msa0190590:intron 30.0%
GTAAAAGAAACAGTAGAATG+AGG + chr2_1:6075503-6075522 Msa0190590:intron 30.0%
! TATTTAATTTCAGGCGAAGT+GGG - chr2_1:6075567-6075586 None:intergenic 30.0%
! TGTGCTGTTGTTATAAAACA+AGG + chr2_1:6075595-6075614 Msa0190590:intron 30.0%
!! TTCTTGGTTGATAATGCATT+AGG - chr2_1:6075637-6075656 None:intergenic 30.0%
CGACTCGATAAAATTTAGTT+CGG - chr2_1:6075859-6075878 None:intergenic 30.0%
!! AGGAAACTACATTTTAATGC+AGG + chr2_1:6076252-6076271 Msa0190590:intron 30.0%
AGGAGATACATGAAGAAAAA+GGG + chr2_1:6076441-6076460 Msa0190590:CDS 30.0%
ATGAAGAAAAAGGGAAAAAG+AGG + chr2_1:6076450-6076469 Msa0190590:CDS 30.0%
CTAAGCATAAGAAAAAGAGA+AGG + chr2_1:6076594-6076613 Msa0190590:CDS 30.0%
GGAAGAAAAAGATTCGGAAT+TGG - chr2_1:6070805-6070824 None:intergenic 35.0%
GATGAAGACCCATTAAATCA+GGG - chr2_1:6070826-6070845 None:intergenic 35.0%
TGATGAAGACCCATTAAATC+AGG - chr2_1:6070827-6070846 None:intergenic 35.0%
! ATGTATGATTTTGCACTCTC+TGG + chr2_1:6071001-6071020 Msa0190590:intron 35.0%
! TGTATGATTTTGCACTCTCT+GGG + chr2_1:6071002-6071021 Msa0190590:intron 35.0%
! GATTTTGAACCCTAATGTGT+TGG + chr2_1:6071065-6071084 Msa0190590:intron 35.0%
!! ATAAGTTTTGTGACACTGCT+TGG - chr2_1:6071349-6071368 None:intergenic 35.0%
TCCAAATCCCAAAGACATTT+AGG - chr2_1:6071441-6071460 None:intergenic 35.0%
TAACAGAAAAAGCGGATAGA+CGG + chr2_1:6071517-6071536 Msa0190590:intron 35.0%
CCAGATCCATCTAATCATAT+TGG - chr2_1:6071753-6071772 None:intergenic 35.0%
CCAATATGATTAGATGGATC+TGG + chr2_1:6071750-6071769 Msa0190590:intron 35.0%
ATTAGCTGCTATGCTTATGA+GGG + chr2_1:6071786-6071805 Msa0190590:CDS 35.0%
AAAAGCCTAATGTAAGGAGT+CGG + chr2_1:6071863-6071882 Msa0190590:CDS 35.0%
AAAGCGCATCCATAAAACAT+AGG - chr2_1:6071991-6072010 None:intergenic 35.0%
GACGAAGGTTTATCATTGTA+TGG + chr2_1:6072012-6072031 Msa0190590:intron 35.0%
! GCATTGACCAAATAGATCAA+AGG - chr2_1:6072144-6072163 None:intergenic 35.0%
TGATCTATTTGGTCAATGCT+AGG + chr2_1:6072145-6072164 Msa0190590:intron 35.0%
AGAGAGATTCATAGGACTTA+TGG + chr2_1:6072255-6072274 Msa0190590:intron 35.0%
GAGAGATTCATAGGACTTAT+GGG + chr2_1:6072256-6072275 Msa0190590:intron 35.0%
TTGTGCAAAATATCAAGGGT+TGG + chr2_1:6072333-6072352 Msa0190590:intron 35.0%
! TGGTCTGAGTTAATTTGAAG+TGG + chr2_1:6072353-6072372 Msa0190590:intron 35.0%
TATGTACTGGATGTATACCT+AGG - chr2_1:6072467-6072486 None:intergenic 35.0%
CAAATGCACCAATTATGTAC+TGG - chr2_1:6072480-6072499 None:intergenic 35.0%
GTACATAATTGGTGCATTTG+AGG + chr2_1:6072480-6072499 Msa0190590:intron 35.0%
GTGCTTCCTTACAAAGTTAT+GGG + chr2_1:6072502-6072521 Msa0190590:intron 35.0%
!! GCAAATTATATGGACTAGTG+AGG + chr2_1:6072550-6072569 Msa0190590:intron 35.0%
TCCCCCTTGTACAAATATTT+GGG + chr2_1:6072729-6072748 Msa0190590:intron 35.0%
ACCCAAATATTTGTACAAGG+GGG - chr2_1:6072733-6072752 None:intergenic 35.0%
GACCCAAATATTTGTACAAG+GGG - chr2_1:6072734-6072753 None:intergenic 35.0%
AAATATTTGGGTCATAGCAG+TGG + chr2_1:6072741-6072760 Msa0190590:intron 35.0%
! CTTCTCTAGTTTGATTCACA+AGG + chr2_1:6072776-6072795 Msa0190590:intron 35.0%
! TCTCTAGTTTGATTCACAAG+GGG + chr2_1:6072778-6072797 Msa0190590:intron 35.0%
TCCCCTAATAGTGTTTAGTT+GGG - chr2_1:6072910-6072929 None:intergenic 35.0%
CTTGGGACATAGAATAACAA+TGG - chr2_1:6072939-6072958 None:intergenic 35.0%
! CATTGTTATTCTATGTCCCA+AGG + chr2_1:6072937-6072956 Msa0190590:intron 35.0%
GTTTCTTATGTTGTGACCTT+GGG - chr2_1:6072956-6072975 None:intergenic 35.0%
TGTTTCTTATGTTGTGACCT+TGG - chr2_1:6072957-6072976 None:intergenic 35.0%
TAGCAAGAAAGTGAAGCTTA+GGG + chr2_1:6073259-6073278 Msa0190590:intron 35.0%
TACAGGATGATTGCAACTAT+GGG - chr2_1:6073339-6073358 None:intergenic 35.0%
TAATACGATTTCAGCCACTA+TGG - chr2_1:6073411-6073430 None:intergenic 35.0%
! TCCCTCAATTTGGATGTTTT+TGG + chr2_1:6073473-6073492 Msa0190590:intron 35.0%
ATGAAGAAGATCATAGCAGA+TGG - chr2_1:6073639-6073658 None:intergenic 35.0%
AGGTCACATAGCTAATGAAA+GGG - chr2_1:6073714-6073733 None:intergenic 35.0%
GTGAACACAAATGATTCAGA+GGG - chr2_1:6073843-6073862 None:intergenic 35.0%
TGTGAACACAAATGATTCAG+AGG - chr2_1:6073844-6073863 None:intergenic 35.0%
! TCTATTTAGCTCAGTTGGTA+AGG + chr2_1:6074247-6074266 Msa0190590:intron 35.0%
!!! TTTTTTTTTTGGTGGTGTCC+GGG - chr2_1:6074309-6074328 None:intergenic 35.0%
AAAAGAAGTCTCATTCGACA+TGG - chr2_1:6074392-6074411 None:intergenic 35.0%
CTGTCGAAGTAAATGAAATG+TGG + chr2_1:6074519-6074538 Msa0190590:CDS 35.0%
AGAATTGGAGCTAGATAAAC+GGG + chr2_1:6074556-6074575 Msa0190590:CDS 35.0%
! AAGTGATGACAAAAGGCATA+GGG + chr2_1:6074604-6074623 Msa0190590:CDS 35.0%
GAATACAAGCATACTCAAGA+AGG + chr2_1:6074710-6074729 Msa0190590:CDS 35.0%
GCATACTCAAGAAGGTTTAA+AGG + chr2_1:6074718-6074737 Msa0190590:CDS 35.0%
TTTAAAGGATGAAGAGCTTG+AGG + chr2_1:6074733-6074752 Msa0190590:CDS 35.0%
GTAAATTTGAGGGGCTTAAT+TGG - chr2_1:6074900-6074919 None:intergenic 35.0%
!!! GAACTATTTTCGAGTTGGTT+CGG - chr2_1:6074940-6074959 None:intergenic 35.0%
AAATAGTTCGAGACTCGATT+CGG + chr2_1:6074951-6074970 Msa0190590:intron 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + chr2_1:6075225-6075244 Msa0190590:intron 35.0%
ACTCCCACATAAAAACTAGT+GGG - chr2_1:6075231-6075250 None:intergenic 35.0%
! CGACATCAAACCTTTTATGA+TGG - chr2_1:6075360-6075379 None:intergenic 35.0%
! GGATTGTAGTTCTTTTCTGA+TGG + chr2_1:6075415-6075434 Msa0190590:intron 35.0%
! GTATTTAATTTCAGGCGAAG+TGG - chr2_1:6075568-6075587 None:intergenic 35.0%
AAACAATGGCACAACTTTCT+TGG - chr2_1:6075653-6075672 None:intergenic 35.0%
! CAAGGTGTTTAGTTAACCTT+AGG - chr2_1:6075697-6075716 None:intergenic 35.0%
! TCGATAAAATTTAGTTCGGC+TGG - chr2_1:6075855-6075874 None:intergenic 35.0%
! ATTTAAGGAACTGAGTTGAC+TGG + chr2_1:6076004-6076023 Msa0190590:intron 35.0%
TTGCTTATAATAGTGATCGG+AGG + chr2_1:6076178-6076197 Msa0190590:intron 35.0%
TGCTTATAATAGTGATCGGA+GGG + chr2_1:6076179-6076198 Msa0190590:intron 35.0%
! TTCTACTAGTCCGGATTTTA+GGG + chr2_1:6076355-6076374 Msa0190590:CDS 35.0%
TCTTTGGACCATAAATAGCA+CGG - chr2_1:6076385-6076404 None:intergenic 35.0%
GCAATCATATGAATCTTCTG+AGG + chr2_1:6076418-6076437 Msa0190590:CDS 35.0%
! ATCATATGAATCTTCTGAGG+AGG + chr2_1:6076421-6076440 Msa0190590:CDS 35.0%
GAGGAGATACATGAAGAAAA+AGG + chr2_1:6076440-6076459 Msa0190590:CDS 35.0%
GCTTACTTTGTCTCTGTCTA+CGG - chr2_1:6070754-6070773 None:intergenic 40.0%
!! GCCTAAATGTCTTTGGGATT+TGG + chr2_1:6071437-6071456 Msa0190590:intron 40.0%
! GATTAGCTGCTATGCTTATG+AGG + chr2_1:6071785-6071804 Msa0190590:CDS 40.0%
GACCTGTCCTTTGATCTATT+TGG + chr2_1:6072134-6072153 Msa0190590:intron 40.0%
GACCAAATAGATCAAAGGAC+AGG - chr2_1:6072139-6072158 None:intergenic 40.0%
!! ATATGACTTGTTTCCGTCCT+AGG + chr2_1:6072447-6072466 Msa0190590:intron 40.0%
TACTGGATGTATACCTAGGA+CGG - chr2_1:6072463-6072482 None:intergenic 40.0%
GGTGCTTCCTTACAAAGTTA+TGG + chr2_1:6072501-6072520 Msa0190590:intron 40.0%
CCAAGTCCCATAACTTTGTA+AGG - chr2_1:6072511-6072530 None:intergenic 40.0%
CCTTACAAAGTTATGGGACT+TGG + chr2_1:6072508-6072527 Msa0190590:intron 40.0%
ACTTGGATCCACTAGAATGT+GGG + chr2_1:6072525-6072544 Msa0190590:intron 40.0%
ATTTGCAACCCACATTCTAG+TGG - chr2_1:6072536-6072555 None:intergenic 40.0%
CTCCCCCTTGTACAAATATT+TGG + chr2_1:6072728-6072747 Msa0190590:intron 40.0%
! CTCTAGTTTGATTCACAAGG+GGG + chr2_1:6072779-6072798 Msa0190590:intron 40.0%
CTTTCATTCCCCATCAATGT+TGG - chr2_1:6072842-6072861 None:intergenic 40.0%
TTGATGGGGAATGAAAGTTC+AGG + chr2_1:6072845-6072864 Msa0190590:intron 40.0%
TGATGGGGAATGAAAGTTCA+GGG + chr2_1:6072846-6072865 Msa0190590:intron 40.0%
GAATGAAAGTTCAGGGAGAA+TGG + chr2_1:6072853-6072872 Msa0190590:intron 40.0%
!! AGTTCAGGGAGAATGGATTT+TGG + chr2_1:6072860-6072879 Msa0190590:intron 40.0%
TAGTGTTTAGTTGGGGGAAA+TGG - chr2_1:6072902-6072921 None:intergenic 40.0%
TCCCCCAACTAAACACTATT+AGG + chr2_1:6072904-6072923 Msa0190590:intron 40.0%
CCCTAATAGTGTTTAGTTGG+GGG - chr2_1:6072908-6072927 None:intergenic 40.0%
CCCCCAACTAAACACTATTA+GGG + chr2_1:6072905-6072924 Msa0190590:intron 40.0%
CCCCTAATAGTGTTTAGTTG+GGG - chr2_1:6072909-6072928 None:intergenic 40.0%
CCCCAACTAAACACTATTAG+GGG + chr2_1:6072906-6072925 Msa0190590:intron 40.0%
CTCCCCTAATAGTGTTTAGT+TGG - chr2_1:6072911-6072930 None:intergenic 40.0%
TGCATGTACTCGAGTCATAT+TGG - chr2_1:6073174-6073193 None:intergenic 40.0%
CTAGCAAGAAAGTGAAGCTT+AGG + chr2_1:6073258-6073277 Msa0190590:intron 40.0%
AAGAAAGTGAAGCTTAGGGA+AGG + chr2_1:6073263-6073282 Msa0190590:intron 40.0%
ACAGGATGATTGCAACTATG+GGG - chr2_1:6073338-6073357 None:intergenic 40.0%
CTACAGGATGATTGCAACTA+TGG - chr2_1:6073340-6073359 None:intergenic 40.0%
! AATAATGTGCTGCTCACTAC+AGG - chr2_1:6073356-6073375 None:intergenic 40.0%
ATAGGGTTGAAACCCTTGTT+TGG + chr2_1:6073534-6073553 Msa0190590:intron 40.0%
TTGGCATTGCACTCATACTT+TGG + chr2_1:6073580-6073599 Msa0190590:intron 40.0%
AGAAAGACGACTAGAGTAGT+AGG - chr2_1:6073681-6073700 None:intergenic 40.0%
ACTACTCTAGTCGTCTTTCT+TGG + chr2_1:6073681-6073700 Msa0190590:intron 40.0%
TCTAGTCGTCTTTCTTGGTT+AGG + chr2_1:6073686-6073705 Msa0190590:intron 40.0%
GAGGTCACATAGCTAATGAA+AGG - chr2_1:6073715-6073734 None:intergenic 40.0%
! AAAGCCTTTTCCCACTAAGT+GGG - chr2_1:6073791-6073810 None:intergenic 40.0%
! AAAAGCCTTTTCCCACTAAG+TGG - chr2_1:6073792-6073811 None:intergenic 40.0%
! ACTTAGTGGGAAAAGGCTTT+TGG + chr2_1:6073791-6073810 Msa0190590:intron 40.0%
TGCATAATATATGCAAGGCC+TGG + chr2_1:6074274-6074293 Msa0190590:intron 40.0%
GCATAATATATGCAAGGCCT+GGG + chr2_1:6074275-6074294 Msa0190590:intron 40.0%
CATAATATATGCAAGGCCTG+GGG + chr2_1:6074276-6074295 Msa0190590:intron 40.0%
!!! TTTTTTTTTGGTGGTGTCCG+GGG - chr2_1:6074308-6074327 None:intergenic 40.0%
AATAGTGGCAAGGGCTTAAA+TGG + chr2_1:6074327-6074346 Msa0190590:intron 40.0%
ATAGTGGCAAGGGCTTAAAT+GGG + chr2_1:6074328-6074347 Msa0190590:intron 40.0%
! GAAGTGATGACAAAAGGCAT+AGG + chr2_1:6074603-6074622 Msa0190590:CDS 40.0%
! ACTGGTACTTTTATCATCCC+CGG - chr2_1:6074663-6074682 None:intergenic 40.0%
TTTAGTTGAGCATGAAGCAG+AGG - chr2_1:6074687-6074706 None:intergenic 40.0%
TTGAGGAGTTTCTACACTCA+AGG + chr2_1:6074750-6074769 Msa0190590:intron 40.0%
! TCATTGCCCTCGTATACTTT+TGG + chr2_1:6074775-6074794 Msa0190590:intron 40.0%
!! CTCGACAGGAGATATTTTGA+AGG - chr2_1:6074839-6074858 None:intergenic 40.0%
!! GAAATGTCGATTTACTCGAC+AGG - chr2_1:6074853-6074872 None:intergenic 40.0%
GTCCTTGATACTATAAGGGT+TGG + chr2_1:6074874-6074893 Msa0190590:intron 40.0%
TAAGCCCCTCAAATTTACGT+AGG + chr2_1:6074902-6074921 Msa0190590:intron 40.0%
AAGCCCCTCAAATTTACGTA+GGG + chr2_1:6074903-6074922 Msa0190590:intron 40.0%
TCAGCCCTACGTAAATTTGA+GGG - chr2_1:6074910-6074929 None:intergenic 40.0%
!!! GTCTCGAACTATTTTCGAGT+TGG - chr2_1:6074945-6074964 None:intergenic 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + chr2_1:6075224-6075243 Msa0190590:intron 40.0%
CACTCCCACATAAAAACTAG+TGG - chr2_1:6075232-6075251 None:intergenic 40.0%
! CTATTGCGTAAATTTAGGGC+TGG - chr2_1:6075921-6075940 None:intergenic 40.0%
! GACTGGCTGTTACAATTTCA+AGG + chr2_1:6076021-6076040 Msa0190590:intron 40.0%
ACTAAAATACCTACTCCCTC+CGG + chr2_1:6076044-6076063 Msa0190590:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr2_1:6076062-6076081 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr2_1:6076063-6076082 None:intergenic 40.0%
! TTTTAATGCAGGAAGAAGCG+AGG + chr2_1:6076263-6076282 Msa0190590:intron 40.0%
!! CTAAAATCCGGACTAGTAGA+AGG - chr2_1:6076356-6076375 None:intergenic 40.0%
! CTTCTACTAGTCCGGATTTT+AGG + chr2_1:6076354-6076373 Msa0190590:CDS 40.0%
!! GTGCTATTTATGGTCCAAAG+AGG + chr2_1:6076384-6076403 Msa0190590:CDS 40.0%
GATTCATATGATTGCAGCGA+TGG - chr2_1:6076413-6076432 None:intergenic 40.0%
GCAGTCATATGAATCTTCTG+AGG + chr2_1:6076472-6076491 Msa0190590:CDS 40.0%
! GTCATATGAATCTTCTGAGG+AGG + chr2_1:6076475-6076494 Msa0190590:CDS 40.0%
AGGAGCTACATGAAGAAAAG+CGG + chr2_1:6076495-6076514 Msa0190590:CDS 40.0%
GTCTCATCATAAAAGCCACT+CGG + chr2_1:6076532-6076551 Msa0190590:CDS 40.0%
GCATAAGAAAAAGAGAAGGG+AGG + chr2_1:6076598-6076617 Msa0190590:CDS 40.0%
TACTTTGTCTCTGTCTACGG+TGG - chr2_1:6070751-6070770 None:intergenic 45.0%
!! GTCTGAAAAGGAAGGTGTTC+TGG + chr2_1:6071831-6071850 Msa0190590:CDS 45.0%
! TTTGGCCGACTCCTTACATT+AGG - chr2_1:6071871-6071890 None:intergenic 45.0%
GCAGTGAGGAAACGTGAATT+TGG - chr2_1:6071889-6071908 None:intergenic 45.0%
! TGTGTGGGTCGAGTTTTCAT+CGG + chr2_1:6072418-6072437 Msa0190590:intron 45.0%
GACTTGGATCCACTAGAATG+TGG + chr2_1:6072524-6072543 Msa0190590:intron 45.0%
ATTTGGGTCATAGCAGTGGA+TGG + chr2_1:6072745-6072764 Msa0190590:intron 45.0%
TTTGGGTCATAGCAGTGGAT+GGG + chr2_1:6072746-6072765 Msa0190590:intron 45.0%
TCAAACCACGCCAACATTGA+TGG + chr2_1:6072829-6072848 Msa0190590:intron 45.0%
CAAACCACGCCAACATTGAT+GGG + chr2_1:6072830-6072849 Msa0190590:intron 45.0%
AAACCACGCCAACATTGATG+GGG + chr2_1:6072831-6072850 Msa0190590:intron 45.0%
TTTAGTTGGGGGAAATGGAC+AGG - chr2_1:6072897-6072916 None:intergenic 45.0%
CTACAAAAACACACGCCTCT+TGG + chr2_1:6073561-6073580 Msa0190590:intron 45.0%
AGTATGAGTGCAATGCCAAG+AGG - chr2_1:6073579-6073598 None:intergenic 45.0%
AAGATCATAGCAGATGGTGC+AGG - chr2_1:6073633-6073652 None:intergenic 45.0%
ACTAGAGTAGTAGGAGGATG+TGG - chr2_1:6073672-6073691 None:intergenic 45.0%
AAGACGACTAGAGTAGTAGG+AGG - chr2_1:6073678-6073697 None:intergenic 45.0%
TTTCCCTCTTCCCACTTAGT+GGG + chr2_1:6073778-6073797 Msa0190590:intron 45.0%
TTTCCCACTAAGTGGGAAGA+GGG - chr2_1:6073784-6073803 None:intergenic 45.0%
! TTTTCCCACTAAGTGGGAAG+AGG - chr2_1:6073785-6073804 None:intergenic 45.0%
TCTTCCCACTTAGTGGGAAA+AGG + chr2_1:6073784-6073803 Msa0190590:intron 45.0%
! TATCCCGCTAGAGCAGTTTT+GGG + chr2_1:6074064-6074083 Msa0190590:intron 45.0%
AAACCCAAAACTGCTCTAGC+GGG - chr2_1:6074070-6074089 None:intergenic 45.0%
CAAACCCAAAACTGCTCTAG+CGG - chr2_1:6074071-6074090 None:intergenic 45.0%
! GAGCTAGATAAACGGGTTTC+AGG + chr2_1:6074563-6074582 Msa0190590:CDS 45.0%
GGCCAACCCTTATAGTATCA+AGG - chr2_1:6074879-6074898 None:intergenic 45.0%
CAGCCCTACGTAAATTTGAG+GGG - chr2_1:6074909-6074928 None:intergenic 45.0%
GTCAGCCCTACGTAAATTTG+AGG - chr2_1:6074911-6074930 None:intergenic 45.0%
CAACTCAAGTTCGGCTCATT+TGG - chr2_1:6075006-6075025 None:intergenic 45.0%
ATTCAAGCTCACGAACAGCT+CGG - chr2_1:6075780-6075799 None:intergenic 45.0%
! GAGTCAAACTTGCTTCAGCT+CGG - chr2_1:6075884-6075903 None:intergenic 45.0%
TCAGGATTAGGAGGAAGGTA+AGG - chr2_1:6076326-6076345 None:intergenic 45.0%
CTTCATCAGGATTAGGAGGA+AGG - chr2_1:6076331-6076350 None:intergenic 45.0%
GAAGGCTCTTCATCAGGATT+AGG - chr2_1:6076338-6076357 None:intergenic 45.0%
CTAGTAGAAGGCTCTTCATC+AGG - chr2_1:6076344-6076363 None:intergenic 45.0%
TGAAGAGCCTTCTACTAGTC+CGG + chr2_1:6076346-6076365 Msa0190590:CDS 45.0%
TCATATGATTGCAGCGATGG+AGG - chr2_1:6076410-6076429 None:intergenic 45.0%
TCATAAAAGCCACTCGGACA+AGG + chr2_1:6076538-6076557 Msa0190590:CDS 45.0%
CATAAAAGCCACTCGGACAA+GGG + chr2_1:6076539-6076558 Msa0190590:CDS 45.0%
ATAAAAGCCACTCGGACAAG+GGG + chr2_1:6076540-6076559 Msa0190590:CDS 45.0%
!!! AATATAGTTATATTTTTTTT+TGG + chr2_1:6075719-6075738 Msa0190590:intron 5.0%
TGAGGGAAGCAGCTGAATTG+CGG + chr2_1:6071803-6071822 Msa0190590:CDS 50.0%
! ACCTTGTTGTACCCCACGTA+CGG - chr2_1:6071914-6071933 None:intergenic 50.0%
TATGGATGCGCTTTCGACGA+AGG + chr2_1:6071997-6072016 Msa0190590:intron 50.0%
GCAGTCACGCACTAATGTGT+GGG + chr2_1:6072403-6072422 Msa0190590:intron 50.0%
GTTTGATTCACAAGGGGGAG+AGG + chr2_1:6072784-6072803 Msa0190590:intron 50.0%
ATTCCCCATCAATGTTGGCG+TGG - chr2_1:6072837-6072856 None:intergenic 50.0%
ATCATAGCAGATGGTGCAGG+AGG - chr2_1:6073630-6073649 None:intergenic 50.0%
AGTAGGAGGATGTGGAACAG+AGG - chr2_1:6073664-6073683 None:intergenic 50.0%
CTTTCCCTCTTCCCACTTAG+TGG + chr2_1:6073777-6073796 Msa0190590:intron 50.0%
! CTATCCCGCTAGAGCAGTTT+TGG + chr2_1:6074063-6074082 Msa0190590:intron 50.0%
!!! CGCTAGAGCAGTTTTGGGTT+TGG + chr2_1:6074069-6074088 Msa0190590:intron 50.0%
CCTTCCACACGTTGCAATCT+GGG + chr2_1:6074092-6074111 Msa0190590:intron 50.0%
GAATCCCAGATTGCAACGTG+TGG - chr2_1:6074099-6074118 None:intergenic 50.0%
! ACTTCGACAGCTCGATTTGC+TGG - chr2_1:6074509-6074528 None:intergenic 50.0%
! AGAAGCGCAGAAAGACATGC+CGG + chr2_1:6074641-6074660 Msa0190590:CDS 50.0%
TAATAGTGACCGGAGGGAGT+AGG - chr2_1:6076056-6076075 None:intergenic 50.0%
!! AGGTGCTATTGGTCCAAGGA+TGG + chr2_1:6076289-6076308 Msa0190590:intron 50.0%
GGCTCTTCATCAGGATTAGG+AGG - chr2_1:6076335-6076354 None:intergenic 50.0%
!! AGGGAACGCCGTGCTATTTA+TGG + chr2_1:6076374-6076393 Msa0190590:CDS 50.0%
!! AGGGGCATTCTAAGAAGCAC+AGG + chr2_1:6076558-6076577 Msa0190590:CDS 50.0%
GAGAACACCGATCCCTTCGA+CGG + chr2_1:6070723-6070742 Msa0190590:five_prime_UTR 55.0%
ATTGCGGCGGCAGTCTGAAA+AGG + chr2_1:6071819-6071838 Msa0190590:CDS 55.0%
TTCCTCACTGCTACCGTACG+TGG + chr2_1:6071898-6071917 Msa0190590:CDS 55.0%
TCCTCACTGCTACCGTACGT+GGG + chr2_1:6071899-6071918 Msa0190590:CDS 55.0%
ACCGTACGTGGGGTACAACA+AGG + chr2_1:6071910-6071929 Msa0190590:CDS 55.0%
CGCAGTCACGCACTAATGTG+TGG + chr2_1:6072402-6072421 Msa0190590:intron 55.0%
TGATTCACAAGGGGGAGAGG+AGG + chr2_1:6072787-6072806 Msa0190590:intron 55.0%
GAAATGGACAGGAGAGGAGG+GGG - chr2_1:6072886-6072905 None:intergenic 55.0%
GGAAATGGACAGGAGAGGAG+GGG - chr2_1:6072887-6072906 None:intergenic 55.0%
GGGAAATGGACAGGAGAGGA+GGG - chr2_1:6072888-6072907 None:intergenic 55.0%
TTGGGGGAAATGGACAGGAG+AGG - chr2_1:6072892-6072911 None:intergenic 55.0%
CACCATCGTTGCTGCCATAG+TGG + chr2_1:6073394-6073413 Msa0190590:intron 55.0%
AGCCACTATGGCAGCAACGA+TGG - chr2_1:6073399-6073418 None:intergenic 55.0%
TGCAGGAGGTAGTACAGGTG+TGG - chr2_1:6073616-6073635 None:intergenic 55.0%
GATGGTGCAGGAGGTAGTAC+AGG - chr2_1:6073621-6073640 None:intergenic 55.0%
GCCTTCCACACGTTGCAATC+TGG + chr2_1:6074091-6074110 Msa0190590:intron 55.0%
CCCAGATTGCAACGTGTGGA+AGG - chr2_1:6074095-6074114 None:intergenic 55.0%
GCGAGCGCGAGAGAAAGAAT+TGG + chr2_1:6074541-6074560 Msa0190590:CDS 55.0%
GAAGCGCAGAAAGACATGCC+GGG + chr2_1:6074642-6074661 Msa0190590:CDS 55.0%
AAGCGCAGAAAGACATGCCG+GGG + chr2_1:6074643-6074662 Msa0190590:CDS 55.0%
! TGAGCATGAAGCAGAGGCAC+TGG - chr2_1:6074681-6074700 None:intergenic 55.0%
ACAGCTCGGTTCAGCTCGAT+AGG - chr2_1:6075766-6075785 None:intergenic 55.0%
!! AAGCGAGGCAGAGGTGCTAT+TGG + chr2_1:6076278-6076297 Msa0190590:intron 55.0%
!! GCAGAGGTGCTATTGGTCCA+AGG + chr2_1:6076285-6076304 Msa0190590:intron 55.0%
GGTCCAAGGATGGATGAGAC+TGG + chr2_1:6076299-6076318 Msa0190590:intron 55.0%
GGTCCAGTCTCATCCATCCT+TGG - chr2_1:6076305-6076324 None:intergenic 55.0%
GCACGGCGTTCCCTAAAATC+CGG - chr2_1:6076368-6076387 None:intergenic 55.0%
TAGAATGCCCCTTGTCCGAG+TGG - chr2_1:6076550-6076569 None:intergenic 55.0%
TCTACGGTGGCACCGTCGAA+GGG - chr2_1:6070738-6070757 None:intergenic 60.0%
GGGAAGCAGCTGAATTGCGG+CGG + chr2_1:6071806-6071825 Msa0190590:CDS 60.0%
CGGCGGCAGTCTGAAAAGGA+AGG + chr2_1:6071823-6071842 Msa0190590:CDS 60.0%
CCTCACTGCTACCGTACGTG+GGG + chr2_1:6071900-6071919 Msa0190590:CDS 60.0%
GGGGAAATGGACAGGAGAGG+AGG - chr2_1:6072889-6072908 None:intergenic 60.0%
GGAGGTAGTACAGGTGTGGC+TGG - chr2_1:6073612-6073631 None:intergenic 60.0%
TGCAGGAAGAAGCGAGGCAG+AGG + chr2_1:6076269-6076288 Msa0190590:intron 60.0%
TGCAGCGATGGAGGCCTCTT+TGG - chr2_1:6076401-6076420 None:intergenic 60.0%
GGTGGCACCGTCGAAGGGAT+CGG - chr2_1:6070733-6070752 None:intergenic 65.0%
GTCTACGGTGGCACCGTCGA+AGG - chr2_1:6070739-6070758 None:intergenic 65.0%
CCCCACGTACGGTAGCAGTG+AGG - chr2_1:6071903-6071922 None:intergenic 65.0%
AAGGCCTGGGGTTCGAACCC+CGG + chr2_1:6074288-6074307 Msa0190590:intron 65.0%
GTGTCCGGGGTTCGAACCCC+AGG - chr2_1:6074295-6074314 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 6070685 6076646 6070685 ID=Msa0190590;Name=Msa0190590
chr2_1 mRNA 6070685 6076646 6070685 ID=Msa0190590-mRNA-1;Parent=Msa0190590;Name=Msa0190590-mRNA-1;_AED=0.14;_eAED=0.14;_QI=83|0.66|0.5|1|0|0.25|4|0|251
chr2_1 exon 6070685 6070767 6070685 ID=Msa0190590-mRNA-1:exon:2731;Parent=Msa0190590-mRNA-1
chr2_1 exon 6071763 6071931 6071763 ID=Msa0190590-mRNA-1:exon:2732;Parent=Msa0190590-mRNA-1
chr2_1 exon 6074510 6074756 6074510 ID=Msa0190590-mRNA-1:exon:2733;Parent=Msa0190590-mRNA-1
chr2_1 exon 6076307 6076646 6076307 ID=Msa0190590-mRNA-1:exon:2734;Parent=Msa0190590-mRNA-1
chr2_1 five_prime_UTR 6070685 6070767 6070685 ID=Msa0190590-mRNA-1:five_prime_utr;Parent=Msa0190590-mRNA-1
chr2_1 CDS 6071763 6071931 6071763 ID=Msa0190590-mRNA-1:cds;Parent=Msa0190590-mRNA-1
chr2_1 CDS 6074510 6074756 6074510 ID=Msa0190590-mRNA-1:cds;Parent=Msa0190590-mRNA-1
chr2_1 CDS 6076307 6076646 6076307 ID=Msa0190590-mRNA-1:cds;Parent=Msa0190590-mRNA-1
Gene Sequence

>Msa0190590

ATGGATCTGGAGACTGAAAACAGATTAGCTGCTATGCTTATGAGGGAAGCAGCTGAATTGCGGCGGCAGTCTGAAAAGGAAGGTGTTCTGGCTTATCTTCAAAAGCCTAATGTAAGGAGTCGGCCAAATTCACGTTTCCTCACTGCTACCGTACGTGGGGTACAACAAGCAAATCGAGCTGTCGAAGTAAATGAAATGTGGCGAGCGCGAGAGAAAGAATTGGAGCTAGATAAACGGGTTTCAGGCACATCAAAAGATAAAAGAAGTGATGACAAAAGGCATAGGGATCACAACACATCAAGAAGCGCAGAAAGACATGCCGGGGATGATAAAAGTACCAGTGCCTCTGCTTCATGCTCAACTAAAAAAGAATACAAGCATACTCAAGAAGGTTTAAAGGATGAAGAGCTTGAGGAGATGGATGAGACTGGACCTTACCTTCCTCCTAATCCTGATGAAGAGCCTTCTACTAGTCCGGATTTTAGGGAACGCCGTGCTATTTATGGTCCAAAGAGGCCTCCATCGCTGCAATCATATGAATCTTCTGAGGAGGAGATACATGAAGAAAAAGGGAAAAAGAGGCAGTCATATGAATCTTCTGAGGAGGAGCTACATGAAGAAAAGCGGAAAAAGAGTAAAAAGTCTCATCATAAAAGCCACTCGGACAAGGGGCATTCTAAGAAGCACAGGTCCAAAGATAAATCTAAGCATAAGAAAAAGAGAAGGGAGGAGAAAACAAGTAAACATCGACGCTAA

Protein sequence

>Msa0190590

MDLETENRLAAMLMREAAELRRQSEKEGVLAYLQKPNVRSRPNSRFLTATVRGVQQANRAVEVNEMWRAREKELELDKRVSGTSKDKRSDDKRHRDHNTSRSAERHAGDDKSTSASASCSTKKEYKHTQEGLKDEELEEMDETGPYLPPNPDEEPSTSPDFRERRAIYGPKRPPSLQSYESSEEEIHEEKGKKRQSYESSEEELHEEKRKKSKKSHHKSHSDKGHSKKHRSKDKSKHKKKRREEKTSKHRR*