AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0413530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0413530 MtrunA17_Chr3g0106041 97.684 475 9 2 1 475 1 473 0.0 832
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0413530 AT5G58470.1 59.718 355 114 9 130 475 88 422 7.66e-80 254
Msa0413530 AT5G58470.2 59.718 355 114 9 130 475 88 422 7.66e-80 254

Find 276 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGGTAGGTTGATTATTTC+AGG 0.168600 3_2:+58018187 Msa0413530:three_prime_UTR
CTACCTTAGCAGCAATTATT+TGG 0.176144 3_2:-58018172 None:intergenic
GGTGGCTATGCTGGTGGATA+TGG 0.228290 3_2:+58014837 Msa0413530:CDS
TGCGCTTGAAACACACTAAA+TGG 0.228816 3_2:-58018387 None:intergenic
TATAATTACTATTATTATAT+TGG 0.229809 3_2:+58019130 Msa0413530:three_prime_UTR
GGTGGTGGTGGTGGAGGATA+TGG 0.242933 3_2:+58015023 Msa0413530:CDS
AAAATCAAATACCTTTCATT+AGG 0.257815 3_2:-58015241 None:intergenic
AACACACTAAATGGAATTAA+TGG 0.263588 3_2:-58018378 None:intergenic
TCTGTTTGGTGCAATGTCTT+TGG 0.264666 3_2:+58019633 Msa0413530:three_prime_UTR
GGTAGAGGAGGTGGTGGTGG+TGG 0.277683 3_2:+58015014 Msa0413530:CDS
ATAGTCTATGATTTCTTCAT+TGG 0.281961 3_2:-58019517 None:intergenic
GGTGGTAGAGGAGGTGGTGG+TGG 0.291014 3_2:+58015011 Msa0413530:CDS
GGCTCTGCGCCACCGTCTTA+TGG 0.291766 3_2:+58014783 Msa0413530:CDS
GCCGCTGGAGCTGGCTCAGC+AGG 0.295410 3_2:-58016315 None:intergenic
GAAGAAGTGGAGGGAGCAAT+AGG 0.301449 3_2:+58015986 Msa0413530:CDS
AGTTGGCTGGTTTCTTGAAC+TGG 0.308491 3_2:+58018008 Msa0413530:three_prime_UTR
TCAATGACAAAGCTCTAGTA+TGG 0.315643 3_2:-58017940 None:intergenic
ATGTACACAATGTTGAATAA+AGG 0.315704 3_2:-58019656 None:intergenic
TATGGTGGGAATGCAAATTA+TGG 0.325350 3_2:+58016123 Msa0413530:CDS
CCATAATGATCCCGCCTATC+AGG 0.326075 3_2:-58017901 None:intergenic
AAATCAAATACCTTTCATTA+GGG 0.334850 3_2:-58015240 None:intergenic
AATTCATATCCTCCTTCATA+TGG 0.347582 3_2:+58016189 Msa0413530:CDS
GGTGGAAGAGGCGGTGGTGG+TGG 0.348847 3_2:+58014990 Msa0413530:CDS
CCCTCTGCGGCTCACTCTGC+TGG 0.349050 3_2:+58017213 Msa0413530:CDS
CAAAATTGACTTCCAATTGA+TGG 0.349288 3_2:-58019302 None:intergenic
TACGGTGGAAGGAGTGGATA+TGG 0.352722 3_2:+58014945 Msa0413530:CDS
AATGACCGCGGTGGCGGTGG+TGG 0.361242 3_2:+58015841 Msa0413530:CDS
GGCGGTGGTGGTGGCTTTCA+AGG 0.361476 3_2:+58015148 Msa0413530:intron
GGTTACGGAGGCGGAGGAGG+TGG 0.362022 3_2:+58014816 Msa0413530:CDS
AAGAAGTGGAGGGAGCAATA+GGG 0.362704 3_2:+58015987 Msa0413530:CDS
GTACTGTGAAATGTGGTCTA+AGG 0.365680 3_2:+58017972 Msa0413530:three_prime_UTR
GTGATGCACGGAGTGGTGGC+AGG 0.365974 3_2:+58016238 Msa0413530:CDS
CATTTGGTAATTCAAGTAAC+TGG 0.367123 3_2:-58019711 None:intergenic
GAACGAAAAGTTATGACATT+TGG 0.367267 3_2:-58019727 None:intergenic
TTCACCGGAGCCGCTGGAGC+TGG 0.368046 3_2:-58016324 None:intergenic
AGTGGTAATCGCGGTGGATT+TGG 0.368372 3_2:+58016285 Msa0413530:CDS
GACCGCGGTGGCGGTGGTGG+AGG 0.370616 3_2:+58015844 Msa0413530:CDS
GGTGGTGGTGGTAGAGGAGG+TGG 0.371502 3_2:+58015005 Msa0413530:CDS
GGAAGAGGCGGTGGTGGTGG+TGG 0.377885 3_2:+58014993 Msa0413530:CDS
TATGGTGGAAGAGGCGGTGG+TGG 0.379420 3_2:+58014987 Msa0413530:CDS
CGCGGTGGCGGTGGTGGAGG+CGG 0.379788 3_2:+58015847 Msa0413530:CDS
CTTTGGTAGGTCTTCCAGAC+TGG 0.381126 3_2:+58019599 Msa0413530:three_prime_UTR
GCATACCCATGGTTATTTGC+TGG 0.383632 3_2:-58017416 None:intergenic
CACTGCTTCACCGGAGCCGC+TGG 0.385775 3_2:-58016330 None:intergenic
CGTGGTGGCCGAGGTGGTGG+TGG 0.390295 3_2:+58015178 Msa0413530:CDS
TATGAAGGAGGATATGAATT+AGG 0.390379 3_2:-58016186 None:intergenic
GGAGGAGGTGGTGGCTATGC+TGG 0.400494 3_2:+58014828 Msa0413530:CDS
AGAGGAGGTGGTGGTGGTGG+AGG 0.402018 3_2:+58015017 Msa0413530:CDS
TGAGCCAGCTCCAGCGGCTC+CGG 0.402504 3_2:+58016320 Msa0413530:CDS
GATCGTGGTGGCCGAGGTGG+TGG 0.405781 3_2:+58015175 Msa0413530:CDS
GGTGGTTACGGAGGCGGAGG+AGG 0.407181 3_2:+58014813 Msa0413530:CDS
GGCTCGTCCCATGTGGCATC+TGG 0.411182 3_2:+58018295 Msa0413530:three_prime_UTR
CTATTCATTAATTCATTCGC+TGG 0.412216 3_2:-58018324 None:intergenic
CTCCAGACATGATTCGATCT+AGG 0.412930 3_2:-58014737 None:intergenic
CGAGGTGGTGGTGGAGGTCG+TGG 0.412944 3_2:+58015187 Msa0413530:CDS
GGGTATGGTGGAAGAGGCGG+TGG 0.413274 3_2:+58014984 Msa0413530:CDS
GGCAGGGCTGCGCCTCAAGC+TGG 0.414310 3_2:+58016255 Msa0413530:CDS
GGTGGTGGTAGAGGAGGTGG+TGG 0.414314 3_2:+58015008 Msa0413530:CDS
TGGTTCATGTGTCCTCTGTT+TGG 0.417270 3_2:+58019619 Msa0413530:three_prime_UTR
GGCTATGCTGGTGGATATGG+TGG 0.418256 3_2:+58014840 Msa0413530:CDS
AATGAAAGCGGCGGTGGTTA+CGG 0.419918 3_2:+58014864 Msa0413530:CDS
CCTGATAGGCGGGATCATTA+TGG 0.420562 3_2:+58017901 Msa0413530:CDS
TCTTCGTCACATTTCTCCTC+AGG 0.422263 3_2:+58019395 Msa0413530:three_prime_UTR
CCTCCACCTACAAGCTATAC+TGG 0.425537 3_2:+58016159 Msa0413530:CDS
ATTCTTATACACCCATCAAT+TGG 0.425845 3_2:+58019290 Msa0413530:three_prime_UTR
TACGGAGGCGGAGGAGGTGG+TGG 0.429664 3_2:+58014819 Msa0413530:CDS
AAAATTTACACTGATGAAAA+CGG 0.429968 3_2:+58017153 Msa0413530:CDS
GGTAACGATGGTGGAGGTTA+CGG 0.430518 3_2:+58014927 Msa0413530:CDS
GGCAATAGGGGTGGCTATGG+TGG 0.434284 3_2:+58017853 Msa0413530:CDS
GGTGGAGGTCGTGGTGGAAG+TGG 0.435367 3_2:+58015196 Msa0413530:CDS
GCTAGTGGTGGTTACGGAGG+CGG 0.436279 3_2:+58014807 Msa0413530:CDS
GGAAACGATGGCGGAGGGTA+TGG 0.438647 3_2:+58014969 Msa0413530:CDS
AATGATGCTCCCACATCAAC+AGG 0.440134 3_2:-58019026 None:intergenic
GGTAGAACTAATGATTATAA+TGG 0.441764 3_2:+58015940 Msa0413530:CDS
GGAGGGTATGGTGGAAGAGG+CGG 0.442381 3_2:+58014981 Msa0413530:CDS
AGCAATAGGGGTGGCTCGTA+TGG 0.442640 3_2:+58016000 Msa0413530:CDS
TTCTCATCGCACTGCTTCAC+CGG 0.442714 3_2:-58016339 None:intergenic
GGAACAATAACTTTGCTAGA+AGG 0.444355 3_2:+58015776 Msa0413530:CDS
TACGACTGAGCAGCAGCAAC+AGG 0.449906 3_2:-58016069 None:intergenic
ATTCATATCCTCCTTCATAT+GGG 0.452118 3_2:+58016190 Msa0413530:CDS
GGTGGAGATCGTGGTGGCCG+AGG 0.454946 3_2:+58015169 Msa0413530:CDS
GGTAACACGGGTGGTTATGG+TGG 0.455825 3_2:+58016213 Msa0413530:CDS
ATTATATTGGCTCATCGCGT+TGG 0.456009 3_2:+58019143 Msa0413530:three_prime_UTR
TTATATTGGCTCATCGCGTT+GGG 0.456549 3_2:+58019144 Msa0413530:three_prime_UTR
GGCTCGTATGGCGGTAATCA+AGG 0.457244 3_2:+58016012 Msa0413530:CDS
GGAGGTAGGTCTGAGAACTA+TGG 0.457510 3_2:+58015916 Msa0413530:CDS
GATAGGCGCAGAGACAATTC+TGG 0.458230 3_2:+58017877 Msa0413530:CDS
GATGCCACATGGGACGAGCC+AGG 0.459572 3_2:-58018292 None:intergenic
GGTAATGACCGCGGTGGCGG+TGG 0.463533 3_2:+58015838 Msa0413530:CDS
AGAAGTGGAGGGAGCAATAG+GGG 0.463566 3_2:+58015988 Msa0413530:CDS
TTGTGTGTCTTGGCATCTTA+CGG 0.465242 3_2:+58019357 Msa0413530:three_prime_UTR
ATAATGCTTATAAATACAAA+TGG 0.466033 3_2:-58019170 None:intergenic
ACCCTAGATCGAATCATGTC+TGG 0.466378 3_2:+58014735 Msa0413530:exon
CAGCAACAGGAGGAGGTGCT+TGG 0.466914 3_2:-58016056 None:intergenic
GGTGGCCGAGGTGGTGGTGG+AGG 0.468434 3_2:+58015181 Msa0413530:CDS
AAGGGATTTATTATTTCAGT+TGG 0.471688 3_2:+58017991 Msa0413530:three_prime_UTR
AACGGTGGTGGAAGAGGCTA+TGG 0.472416 3_2:+58014903 Msa0413530:CDS
GGTGGCGGTGGTGGAGGCGG+TGG 0.473401 3_2:+58015850 Msa0413530:CDS
AGGGGCAATAGGGGTGGCTA+TGG 0.473447 3_2:+58017850 Msa0413530:intron
AGCGGAAACGGTGGTGGAAG+AGG 0.473501 3_2:+58014897 Msa0413530:CDS
AGTGGTGGTTACGGAGGCGG+AGG 0.475046 3_2:+58014810 Msa0413530:CDS
GATTTATTATTTCAGTTGGC+TGG 0.475448 3_2:+58017995 Msa0413530:three_prime_UTR
GAGACAATTCTGGTCCTGAT+AGG 0.475626 3_2:+58017887 Msa0413530:CDS
GCTCAGTCGTATGGTGGTGC+TGG 0.475989 3_2:+58016081 Msa0413530:CDS
GGCGGAGGGTATGGTGGAAG+AGG 0.479378 3_2:+58014978 Msa0413530:CDS
GGAAGATCTTGAAGCATGTA+TGG 0.480275 3_2:+58018690 Msa0413530:three_prime_UTR
AATAGAGGAGGAAGTGGTGG+AGG 0.482009 3_2:+58015877 Msa0413530:CDS
AAAATTGACTTCCAATTGAT+GGG 0.485636 3_2:-58019301 None:intergenic
TTATTTGCTGGAGGAGCCCT+TGG 0.485958 3_2:-58017404 None:intergenic
GTGACGAAGAAAGCATCAAA+AGG 0.486366 3_2:-58019382 None:intergenic
TCCTGCTGAGCCAGCTCCAG+CGG 0.489524 3_2:+58016314 Msa0413530:CDS
TGGAAGAATAAAGCAGAAGA+GGG 0.490876 3_2:+58017101 Msa0413530:CDS
AGTGGTAATGACCGCGGTGG+CGG 0.492909 3_2:+58015835 Msa0413530:CDS
TATGGTGCTAGTGGTGGTTA+CGG 0.496614 3_2:+58014801 Msa0413530:CDS
TACGGTCACGATGCCGGAGG+TGG 0.496771 3_2:+58014762 Msa0413530:CDS
AAATCTCACTTTCTCTCTTG+TGG 0.496836 3_2:+58014703 Msa0413530:five_prime_UTR
GGTCCACCAGTATAGCTTGT+AGG 0.498234 3_2:-58016165 None:intergenic
CTAAAATTAACCTGTTGATG+TGG 0.498596 3_2:+58019016 Msa0413530:three_prime_UTR
CGAATCATGTCTGGAGGGTA+CGG 0.500460 3_2:+58014744 Msa0413530:exon
TGAGCAGCAGCAACAGGAGG+AGG 0.506876 3_2:-58016063 None:intergenic
GGAGGTTACGGTGGAAGGAG+TGG 0.509529 3_2:+58014939 Msa0413530:CDS
AATCGAAGTGTTGTGTGTCT+TGG 0.509577 3_2:+58019347 Msa0413530:three_prime_UTR
AGAGGACACATGAACCAGTC+TGG 0.509986 3_2:-58019613 None:intergenic
GGCAGAGAAGATGGTGGCTA+TGG 0.512433 3_2:+58016033 Msa0413530:CDS
TCTCCAAATAATTGCTGCTA+AGG 0.513490 3_2:+58018169 Msa0413530:three_prime_UTR
GGAACAAAAGGAAGCGGAAA+CGG 0.514123 3_2:+58014885 Msa0413530:CDS
CGTGGTGGAAGTGGCAGAGA+TGG 0.514913 3_2:+58015205 Msa0413530:CDS
GGAAGGGGTAATAACAATGA+TGG 0.515263 3_2:+58015964 Msa0413530:CDS
TAAAATTAACCTGTTGATGT+GGG 0.517196 3_2:+58019017 Msa0413530:three_prime_UTR
GGTAATCGCGGTGGATTTGG+TGG 0.517464 3_2:+58016288 Msa0413530:CDS
TACATGCTTCAAGATCTTCC+TGG 0.518554 3_2:-58018687 None:intergenic
AAACAGAATCACTAATATCC+TGG 0.518768 3_2:-58018420 None:intergenic
GGCGGTGGTTACGGAACAAA+AGG 0.520392 3_2:+58014873 Msa0413530:CDS
TCCAGACATGATTCGATCTA+GGG 0.521058 3_2:-58014736 None:intergenic
ACCAGCAGAGTGAGCCGCAG+AGG 0.522012 3_2:-58017214 None:intergenic
AACTATCCACCCACCTATGG+TGG 0.522301 3_2:+58016108 Msa0413530:CDS
CAATTCTGGTCCTGATAGGC+GGG 0.522423 3_2:+58017891 Msa0413530:CDS
GGAAACTATCCACCCACCTA+TGG 0.522424 3_2:+58016105 Msa0413530:CDS
AAAGGAAGCGGAAACGGTGG+TGG 0.522540 3_2:+58014891 Msa0413530:CDS
AATGATTATAATGGTGGAAG+GGG 0.522597 3_2:+58015949 Msa0413530:CDS
AAGACACACAACACTTCGAT+TGG 0.522667 3_2:-58019345 None:intergenic
ATAATTTGCATTCCCACCAT+AGG 0.522816 3_2:-58016121 None:intergenic
TATAATAGAGGAGGAAGTGG+TGG 0.523941 3_2:+58015874 Msa0413530:CDS
GAAGTGGCAGAGATGGAGAT+TGG 0.524419 3_2:+58015212 Msa0413530:CDS
TTCTTGAACTGGATGCTAAG+AGG 0.525525 3_2:+58018019 Msa0413530:three_prime_UTR
ATTTGCATTCCCACCATAGG+TGG 0.526139 3_2:-58016118 None:intergenic
CTACAAGCTGAAATTGATTG+AGG 0.526935 3_2:+58019438 Msa0413530:three_prime_UTR
TTGGAAGAATAAAGCAGAAG+AGG 0.529281 3_2:+58017100 Msa0413530:CDS
GGATAAATGCTTTACATCCC+TGG 0.529510 3_2:+58018274 Msa0413530:three_prime_UTR
AGAACTAATGATTATAATGG+TGG 0.530788 3_2:+58015943 Msa0413530:CDS
TATGGTGGAAACGATGGCGG+AGG 0.534802 3_2:+58014963 Msa0413530:CDS
GGTAATCAAGGCAGAGAAGA+TGG 0.534827 3_2:+58016024 Msa0413530:CDS
CAAATAATTGCTGCTAAGGT+AGG 0.535903 3_2:+58018173 Msa0413530:three_prime_UTR
GGAGGGTACGGTCACGATGC+CGG 0.536528 3_2:+58014756 Msa0413530:CDS
GGTGGTGGTGGAGGATATGG+AGG 0.536529 3_2:+58015026 Msa0413530:CDS
AATAACAATGATGGAAGAAG+TGG 0.537553 3_2:+58015973 Msa0413530:CDS
GGTGGGAATGAAAGCGGCGG+TGG 0.537588 3_2:+58014858 Msa0413530:CDS
GTTGCTGCTGCTCAGTCGTA+TGG 0.538233 3_2:+58016072 Msa0413530:CDS
ATGCCACATGGGACGAGCCA+GGG 0.538600 3_2:-58018291 None:intergenic
CTAATGATTATAATGGTGGA+AGG 0.539111 3_2:+58015947 Msa0413530:CDS
CGGTGGCGCAGAGCCACCTC+CGG 0.539154 3_2:-58014775 None:intergenic
GGAGGTGATGCACGGAGTGG+TGG 0.539236 3_2:+58016234 Msa0413530:CDS
TGCATGTTATATCTTTCCAT+CGG 0.540751 3_2:+58019048 Msa0413530:three_prime_UTR
GGAGATCGTGGTGGCCGAGG+TGG 0.541908 3_2:+58015172 Msa0413530:CDS
GGTGGAGGATATGGAGGTCG+AGG 0.544450 3_2:+58015032 Msa0413530:CDS
TAATGATTATAATGGTGGAA+GGG 0.546672 3_2:+58015948 Msa0413530:CDS
AACAATGATGGAAGAAGTGG+AGG 0.547521 3_2:+58015976 Msa0413530:CDS
GCTATGCTGGTGGATATGGT+GGG 0.548389 3_2:+58014841 Msa0413530:CDS
CCAGCAGAGTGAGCCGCAGA+GGG 0.548746 3_2:-58017213 None:intergenic
AACGATGGCGGAGGGTATGG+TGG 0.548905 3_2:+58014972 Msa0413530:CDS
AGAGGGGTTATAAAGATCAA+TGG 0.552074 3_2:+58017118 Msa0413530:CDS
GCCACCGCGGTCATTACCAC+TGG 0.552093 3_2:-58015833 None:intergenic
ATGGTGGAGGTTACGGTGGA+AGG 0.552221 3_2:+58014934 Msa0413530:CDS
TTCATATCCTCCTTCATATG+GGG 0.555323 3_2:+58016191 Msa0413530:CDS
GGATATAATAGAGGAGGAAG+TGG 0.557118 3_2:+58015871 Msa0413530:CDS
TCTGCGGCTCACTCTGCTGG+TGG 0.557806 3_2:+58017216 Msa0413530:CDS
TACTGTGAAATGTGGTCTAA+GGG 0.558476 3_2:+58017973 Msa0413530:three_prime_UTR
TTTATCCACATGATGACACT+TGG 0.558774 3_2:-58018258 None:intergenic
GGGGTGGCTATGGTGGAGAT+AGG 0.562476 3_2:+58017860 Msa0413530:CDS
AATTCATCAACAGTCACATC+GGG 0.562494 3_2:-58016411 None:intergenic
GGCTTGTACCAGATGCCACA+TGG 0.564372 3_2:-58018303 None:intergenic
GGTGGTGGTGGAGGTCGTGG+TGG 0.565177 3_2:+58015190 Msa0413530:CDS
AACACGGGTGGTTATGGTGG+AGG 0.565229 3_2:+58016216 Msa0413530:CDS
GGCAGAGAAATCTGCACCAA+GGG 0.566623 3_2:+58017388 Msa0413530:CDS
AGCTGAAATTGATTGAGGAC+TGG 0.569628 3_2:+58019443 Msa0413530:three_prime_UTR
GGCTTTCAAGGTGGAGATCG+TGG 0.572562 3_2:+58015160 Msa0413530:CDS
ACTGGCTGTCGAGCAGCTCA+AGG 0.573895 3_2:+58018578 Msa0413530:three_prime_UTR
CAGTCGTATGGTGGTGCTGG+TGG 0.574333 3_2:+58016084 Msa0413530:CDS
TGATGCACGGAGTGGTGGCA+GGG 0.575497 3_2:+58016239 Msa0413530:CDS
TGACGAAGAAAGCATCAAAA+GGG 0.575798 3_2:-58019381 None:intergenic
TCATTACCACTGGTAGGACA+TGG 0.578812 3_2:-58015823 None:intergenic
CAATTCATCAACAGTCACAT+CGG 0.580763 3_2:-58016412 None:intergenic
TTACAAAATCAGTGTTGCAA+TGG 0.582254 3_2:+58017367 Msa0413530:CDS
GGCTATGGAGGTAACGATGG+TGG 0.582622 3_2:+58014918 Msa0413530:CDS
CAGAGGGATCTTCGTAAGCA+AGG 0.583417 3_2:-58017197 None:intergenic
GGAGGTGGTGGCTATGCTGG+TGG 0.584120 3_2:+58014831 Msa0413530:CDS
ATTGGCGTTGCCCTAATGAA+AGG 0.587889 3_2:+58015230 Msa0413530:CDS
GGAGGCGGTGGATATAATAG+AGG 0.588918 3_2:+58015862 Msa0413530:CDS
CCAGTATAGCTTGTAGGTGG+AGG 0.590446 3_2:-58016159 None:intergenic
GGCGGTGGATATAATAGAGG+AGG 0.590760 3_2:+58015865 Msa0413530:CDS
CATTACCACTGGTAGGACAT+GGG 0.591351 3_2:-58015822 None:intergenic
GGTGGAAGGAGTGGATATGG+TGG 0.592851 3_2:+58014948 Msa0413530:CDS
CACGACCTCCACCACCACCT+CGG 0.595679 3_2:-58015186 None:intergenic
GTGAAACAAATATCAACCGA+TGG 0.599348 3_2:-58019064 None:intergenic
ATGGTGGAAACGATGGCGGA+GGG 0.599478 3_2:+58014964 Msa0413530:CDS
ACAATTCTGGTCCTGATAGG+CGG 0.601815 3_2:+58017890 Msa0413530:CDS
AGTTCTCAGACCTACCTCCT+CGG 0.603508 3_2:-58015912 None:intergenic
CCACCGTCTTATGGTGCTAG+TGG 0.605859 3_2:+58014792 Msa0413530:CDS
CGCCTCCACCACCGCCACCG+CGG 0.606329 3_2:-58015846 None:intergenic
CCGTCTTATGGTGCTAGTGG+TGG 0.606671 3_2:+58014795 Msa0413530:CDS
TACCCATGGTTATTTGCTGG+AGG 0.607300 3_2:-58017413 None:intergenic
CTCCTCCAGCAAATAACCAT+GGG 0.607908 3_2:+58017411 Msa0413530:CDS
ATAGGCGGGATCATTATGGC+GGG 0.609988 3_2:+58017905 Msa0413530:CDS
GTTATGGTGGAGGTGATGCA+CGG 0.610928 3_2:+58016226 Msa0413530:CDS
AAGCAGTGCGATGAGAATTG+TGG 0.612091 3_2:+58016345 Msa0413530:CDS
CAATGACAAAGCTCTAGTAT+GGG 0.614329 3_2:-58017939 None:intergenic
GGATATGGTGGGAATGAAAG+CGG 0.617720 3_2:+58014852 Msa0413530:CDS
CTAGATCGAATCATGTCTGG+AGG 0.618966 3_2:+58014738 Msa0413530:exon
GGTGGTGGAAGAGGCTATGG+AGG 0.620498 3_2:+58014906 Msa0413530:CDS
TTAAACCAAGTGTCATCATG+TGG 0.621366 3_2:+58018253 Msa0413530:three_prime_UTR
GGGTACGGTCACGATGCCGG+AGG 0.621720 3_2:+58014759 Msa0413530:CDS
AGGAATGAATGTAACAAATG+TGG 0.621828 3_2:+58015796 Msa0413530:CDS
CGATTGGAAAGAAGCAGCAG+AGG 0.622622 3_2:-58019329 None:intergenic
TTTGCATTCCCACCATAGGT+GGG 0.624211 3_2:-58016117 None:intergenic
AGTGGATATGGTGGAAACGA+TGG 0.627730 3_2:+58014957 Msa0413530:CDS
GTTGTAGAAGTGAAATGCAT+TGG 0.629551 3_2:+58018954 Msa0413530:three_prime_UTR
GCTCCTCCAGCAAATAACCA+TGG 0.633052 3_2:+58017410 Msa0413530:CDS
ACTATCCACCCACCTATGGT+GGG 0.633383 3_2:+58016109 Msa0413530:CDS
CCACCAGTATAGCTTGTAGG+TGG 0.635733 3_2:-58016162 None:intergenic
GGAAGAATAAAGCAGAAGAG+GGG 0.637899 3_2:+58017102 Msa0413530:CDS
TGTCAAGTGTTCACAGCCTG+AGG 0.639261 3_2:-58019411 None:intergenic
CCACCTACAAGCTATACTGG+TGG 0.639536 3_2:+58016162 Msa0413530:CDS
GGTGGTGGTGGCTTTCAAGG+TGG 0.642391 3_2:+58015151 Msa0413530:CDS
TATGGAGGTAACGATGGTGG+AGG 0.642481 3_2:+58014921 Msa0413530:CDS
AACGATGGTGGAGGTTACGG+TGG 0.645624 3_2:+58014930 Msa0413530:CDS
CATCCCTGGCTCGTCCCATG+TGG 0.647934 3_2:+58018288 Msa0413530:three_prime_UTR
CCACTGTCATATCCAGCTTG+AGG 0.650585 3_2:-58016267 None:intergenic
AATATGCAAGTCTTCATCAG+AGG 0.651656 3_2:-58018740 None:intergenic
GGTAGGTCTGAGAACTATGG+AGG 0.651960 3_2:+58015919 Msa0413530:CDS
ATAGCTTGTAGGTGGAGGAA+CGG 0.652251 3_2:-58016154 None:intergenic
TCATATCCTCCTTCATATGG+GGG 0.652342 3_2:+58016192 Msa0413530:CDS
GCTGCTGCTCAGTCGTATGG+TGG 0.652573 3_2:+58016075 Msa0413530:CDS
GGTTACGGAACAAAAGGAAG+CGG 0.653332 3_2:+58014879 Msa0413530:CDS
GATAGGCGGGATCATTATGG+CGG 0.653402 3_2:+58017904 Msa0413530:CDS
AATAGGGGTGGCTCGTATGG+CGG 0.653835 3_2:+58016003 Msa0413530:CDS
GCTTGTACCAGATGCCACAT+GGG 0.655830 3_2:-58018302 None:intergenic
GCATTCCCACCATAGGTGGG+TGG 0.656465 3_2:-58016114 None:intergenic
TCATCAACAGTCACATCGGG+TGG 0.658491 3_2:-58016408 None:intergenic
GACTGAGCAGCAGCAACAGG+AGG 0.661268 3_2:-58016066 None:intergenic
GGTGCTAGTGGTGGTTACGG+AGG 0.662750 3_2:+58014804 Msa0413530:CDS
GGATATGGTGGAAACGATGG+CGG 0.665261 3_2:+58014960 Msa0413530:CDS
AGAGGCTATGGAGGTAACGA+TGG 0.666925 3_2:+58014915 Msa0413530:CDS
AAAGACATTGCACCAAACAG+AGG 0.667000 3_2:-58019631 None:intergenic
ATGACAATAACCGAGGAGGT+AGG 0.670537 3_2:+58015902 Msa0413530:CDS
TATGACAGTGGTAATCGCGG+TGG 0.670681 3_2:+58016279 Msa0413530:CDS
TAGATCGAATCATGTCTGGA+GGG 0.672018 3_2:+58014739 Msa0413530:exon
ATTACCACTGGTAGGACATG+GGG 0.672283 3_2:-58015821 None:intergenic
TGGCAGAGAAATCTGCACCA+AGG 0.672792 3_2:+58017387 Msa0413530:CDS
CCACCACTAGCACCATAAGA+CGG 0.679469 3_2:-58014795 None:intergenic
GGTGGAGGTGATGCACGGAG+TGG 0.684645 3_2:+58016231 Msa0413530:CDS
CCGCGGTCATTACCACTGGT+AGG 0.688795 3_2:-58015829 None:intergenic
ACAAAAGGAAGCGGAAACGG+TGG 0.693234 3_2:+58014888 Msa0413530:CDS
GGATATGACAGTGGTAATCG+CGG 0.695675 3_2:+58016276 Msa0413530:CDS
ACCAGTGGTAATGACCGCGG+TGG 0.704119 3_2:+58015832 Msa0413530:CDS
GGATATGACAATAACCGAGG+AGG 0.710966 3_2:+58015898 Msa0413530:CDS
ACAATGATGGAAGAAGTGGA+GGG 0.713610 3_2:+58015977 Msa0413530:CDS
GGTACCCCATGTCCTACCAG+TGG 0.718167 3_2:+58015817 Msa0413530:CDS
AGTGGAGGGAGCAATAGGGG+TGG 0.724389 3_2:+58015991 Msa0413530:CDS
GGAGGATATGACAATAACCG+AGG 0.724526 3_2:+58015895 Msa0413530:CDS
CCACTAGCACCATAAGACGG+TGG 0.725347 3_2:-58014792 None:intergenic
AATCAAGGCAGAGAAGATGG+TGG 0.725920 3_2:+58016027 Msa0413530:CDS
TTTCAAGGTGGAGATCGTGG+TGG 0.727623 3_2:+58015163 Msa0413530:CDS
CCTCAAGCTGGATATGACAG+TGG 0.728107 3_2:+58016267 Msa0413530:CDS
CCTACCAGTGGTAATGACCG+CGG 0.741050 3_2:+58015829 Msa0413530:CDS
TATGGTGGGAATGAAAGCGG+CGG 0.742368 3_2:+58014855 Msa0413530:CDS
TGCTTACGAAGATCCCTCTG+CGG 0.747761 3_2:+58017200 Msa0413530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATATTTACATAGTTT+AGG + chr3_2:58015474-58015493 Msa0413530:intron 10.0%
!! TATTATATTTACATAGTTTA+GGG + chr3_2:58015475-58015494 Msa0413530:intron 10.0%
!! TTATTATATTTACATAGTTT+AGG + chr3_2:58015474-58015493 Msa0413530:intron 10.0%
!! TATTATATTTACATAGTTTA+GGG + chr3_2:58015475-58015494 Msa0413530:intron 10.0%
!!! TTATTATGTTTACATATTTT+AGG + chr3_2:58015628-58015647 Msa0413530:intron 10.0%
!! GAAAAATAAAATAAAAGATA+TGG - chr3_2:58017558-58017577 None:intergenic 10.0%
!!! TAATAATTTGTAAGATTTTT+CGG + chr3_2:58019199-58019218 Msa0413530:three_prime_UTR 10.0%
!! TGTCAAATTTCATAAAATTT+AGG + chr3_2:58015599-58015618 Msa0413530:intron 15.0%
!! GTCAAATTTCATAAAATTTA+GGG + chr3_2:58015600-58015619 Msa0413530:intron 15.0%
!! TATTGTTATATATATAGTTG+TGG + chr3_2:58015754-58015773 Msa0413530:intron 15.0%
!! ATTGTTATATATATAGTTGT+GGG + chr3_2:58015755-58015774 Msa0413530:intron 15.0%
!!! TTTTTTTTTTTTATCACGAA+TGG + chr3_2:58016508-58016527 Msa0413530:intron 15.0%
!!! TTTATTTTTTCATTCTCTTT+GGG + chr3_2:58017019-58017038 Msa0413530:intron 15.0%
!!! GATAAATGATTTTCAAATTT+AGG + chr3_2:58017651-58017670 Msa0413530:intron 15.0%
!!! TTTAGGTTTTTTTTTCAATT+TGG + chr3_2:58017668-58017687 Msa0413530:intron 15.0%
!!! TTTTGTACTTTACATTTATT+TGG + chr3_2:58017693-58017712 Msa0413530:intron 15.0%
!!! ATTGTTTTTCTTTGTTTTAT+AGG + chr3_2:58017830-58017849 Msa0413530:intron 15.0%
!!! TTGTTTTTCTTTGTTTTATA+GGG + chr3_2:58017831-58017850 Msa0413530:intron 15.0%
!!! TTATATGAATGTTTTTATAG+AGG + chr3_2:58018135-58018154 Msa0413530:intron 15.0%
!!! TTTAAAACAATTTTATTACC+AGG + chr3_2:58018669-58018688 Msa0413530:three_prime_UTR 15.0%
!! ATTATACCAATGAAAAATTA+TGG - chr3_2:58019116-58019135 None:intergenic 15.0%
!! AAATCAAATACCTTTCATTA+GGG - chr3_2:58015243-58015262 None:intergenic 20.0%
!! AAAATCAAATACCTTTCATT+AGG - chr3_2:58015244-58015263 None:intergenic 20.0%
!!! GAAAAATTTATGATTTTCAG+TGG + chr3_2:58015272-58015291 Msa0413530:intron 20.0%
!! TTATATGTATTCACATAGTT+TGG - chr3_2:58015326-58015345 None:intergenic 20.0%
!!! ACGATTTTTATGTACATTTA+GGG + chr3_2:58015415-58015434 Msa0413530:intron 20.0%
!!! TAACGAATTTTATATAGCTT+AGG + chr3_2:58015445-58015464 Msa0413530:intron 20.0%
!!! AACGAATTTTATATAGCTTA+GGG + chr3_2:58015446-58015465 Msa0413530:intron 20.0%
!! CAATATGTATCTCAAAAATA+TGG - chr3_2:58016593-58016612 None:intergenic 20.0%
!!! TAGGTTTATATTTTCATTAG+AGG + chr3_2:58016659-58016678 Msa0413530:intron 20.0%
!! CTATCACCAAAAAAAAAAAA+AGG + chr3_2:58016806-58016825 Msa0413530:intron 20.0%
!!! TTCAAGCCTTTTTTTTTTTT+TGG - chr3_2:58016815-58016834 None:intergenic 20.0%
!! TTAGAAGAATAAAGCAAAAA+GGG + chr3_2:58016988-58017007 Msa0413530:intron 20.0%
!!! GTTTATTTTTTCATTCTCTT+TGG + chr3_2:58017018-58017037 Msa0413530:intron 20.0%
!!! GTGTAAATTTTAATGTTGTA+AGG - chr3_2:58017144-58017163 None:intergenic 20.0%
!! AAAATTTACACTGATGAAAA+CGG + chr3_2:58017153-58017172 Msa0413530:CDS 20.0%
!!! ATTTTCAGATTATGATTTGA+GGG + chr3_2:58017343-58017362 Msa0413530:intron 20.0%
!!! TAGTTTAGAACTTCAAAAAA+GGG - chr3_2:58017810-58017829 None:intergenic 20.0%
!!! TTAGTTTAGAACTTCAAAAA+AGG - chr3_2:58017811-58017830 None:intergenic 20.0%
!!! TGTTTTTCTTTGTTTTATAG+GGG + chr3_2:58017832-58017851 Msa0413530:intron 20.0%
!!! GTATATCAGTTATATTTTGA+TGG + chr3_2:58018353-58018372 Msa0413530:three_prime_UTR 20.0%
!!! AAGTTATATACTGTTTTGAA+AGG + chr3_2:58018481-58018500 Msa0413530:three_prime_UTR 20.0%
!!! AAGTAGTAAAACTGTTTTTT+TGG + chr3_2:58018842-58018861 Msa0413530:three_prime_UTR 20.0%
!!! TGTTTTTTTGGATGAAATTA+AGG + chr3_2:58018854-58018873 Msa0413530:three_prime_UTR 20.0%
!!! GTTTTTTTGGATGAAATTAA+GGG + chr3_2:58018855-58018874 Msa0413530:three_prime_UTR 20.0%
!!! TTTTTTTGGATGAAATTAAG+GGG + chr3_2:58018856-58018875 Msa0413530:three_prime_UTR 20.0%
!!! ATTGATATAGTTGATCTTTT+TGG + chr3_2:58018924-58018943 Msa0413530:three_prime_UTR 20.0%
!!! TTGATATAGTTGATCTTTTT+GGG + chr3_2:58018925-58018944 Msa0413530:three_prime_UTR 20.0%
!!! ACAGGTTAATTTTAGAAATT+AGG - chr3_2:58019011-58019030 None:intergenic 20.0%
!! ATCTATTGCTAAAAAAATAG+GGG - chr3_2:58019497-58019516 None:intergenic 20.0%
!! GATCTATTGCTAAAAAAATA+GGG - chr3_2:58019498-58019517 None:intergenic 20.0%
!!! TTTATTGCTTTCTTTTTCTT+TGG + chr3_2:58019582-58019601 Msa0413530:three_prime_UTR 20.0%
!! GACGATTTTTATGTACATTT+AGG + chr3_2:58015414-58015433 Msa0413530:intron 25.0%
!!! ACATATTTTAGGTGCTAAAT+CGG + chr3_2:58015639-58015658 Msa0413530:intron 25.0%
! GGTAGAACTAATGATTATAA+TGG + chr3_2:58015940-58015959 Msa0413530:CDS 25.0%
! AGAACTAATGATTATAATGG+TGG + chr3_2:58015943-58015962 Msa0413530:CDS 25.0%
!! TAATGATTATAATGGTGGAA+GGG + chr3_2:58015948-58015967 Msa0413530:CDS 25.0%
!!! ACTTGAATTTACTCTGAAAT+TGG - chr3_2:58016552-58016571 None:intergenic 25.0%
! ACAAATGTAACAAAATGTCT+AGG - chr3_2:58016694-58016713 None:intergenic 25.0%
!!! TTTGTTTTAACTTCCTATGT+TGG + chr3_2:58016709-58016728 Msa0413530:intron 25.0%
!! TTGCTTTATTCTTCTAACTT+AGG - chr3_2:58016985-58017004 None:intergenic 25.0%
! GTTAGAAGAATAAAGCAAAA+AGG + chr3_2:58016987-58017006 Msa0413530:intron 25.0%
! TAGAAGAATAAAGCAAAAAG+GGG + chr3_2:58016989-58017008 Msa0413530:intron 25.0%
!! CATTTTCAGATTATGATTTG+AGG + chr3_2:58017342-58017361 Msa0413530:intron 25.0%
!! TTTTCAGATTATGATTTGAG+GGG + chr3_2:58017344-58017363 Msa0413530:intron 25.0%
! TCATCATAACGTTAATGTAA+AGG + chr3_2:58017629-58017648 Msa0413530:intron 25.0%
! AAACACTCAAATGTATAACA+TGG - chr3_2:58017762-58017781 None:intergenic 25.0%
!! AGTTTAGAACTTCAAAAAAG+GGG - chr3_2:58017809-58017828 None:intergenic 25.0%
! AAGGGATTTATTATTTCAGT+TGG + chr3_2:58017991-58018010 Msa0413530:three_prime_UTR 25.0%
! AACACACTAAATGGAATTAA+TGG - chr3_2:58018381-58018400 None:intergenic 25.0%
!!! TATATACTGTTTTGAAAGGA+AGG + chr3_2:58018485-58018504 Msa0413530:three_prime_UTR 25.0%
! TAAAATTAACCTGTTGATGT+GGG + chr3_2:58019017-58019036 Msa0413530:three_prime_UTR 25.0%
!! TCAACTCCATAATTTTTCAT+TGG + chr3_2:58019107-58019126 Msa0413530:three_prime_UTR 25.0%
!! AAAATTGACTTCCAATTGAT+GGG - chr3_2:58019304-58019323 None:intergenic 25.0%
! TCTATTGCTAAAAAAATAGG+GGG - chr3_2:58019496-58019515 None:intergenic 25.0%
! GGATCTATTGCTAAAAAAAT+AGG - chr3_2:58019499-58019518 None:intergenic 25.0%
! ATAGTCTATGATTTCTTCAT+TGG - chr3_2:58019520-58019539 None:intergenic 25.0%
! ATGTACACAATGTTGAATAA+AGG - chr3_2:58019659-58019678 None:intergenic 25.0%
TTCCTGCAGTTAAGATATTA+GGG + chr3_2:58015383-58015402 Msa0413530:intron 30.0%
TTGACAACTTCATATAGCTT+AGG + chr3_2:58015504-58015523 Msa0413530:intron 30.0%
TGACAACTTCATATAGCTTA+GGG + chr3_2:58015505-58015524 Msa0413530:intron 30.0%
TAGTTTAGGGACTAAATTGA+CGG + chr3_2:58015547-58015566 Msa0413530:intron 30.0%
AGGAATGAATGTAACAAATG+TGG + chr3_2:58015796-58015815 Msa0413530:CDS 30.0%
! CTAATGATTATAATGGTGGA+AGG + chr3_2:58015947-58015966 Msa0413530:CDS 30.0%
! AATGATTATAATGGTGGAAG+GGG + chr3_2:58015949-58015968 Msa0413530:CDS 30.0%
! AATAACAATGATGGAAGAAG+TGG + chr3_2:58015973-58015992 Msa0413530:CDS 30.0%
TATGAAGGAGGATATGAATT+AGG - chr3_2:58016189-58016208 None:intergenic 30.0%
AATTCATATCCTCCTTCATA+TGG + chr3_2:58016189-58016208 Msa0413530:CDS 30.0%
ATTCATATCCTCCTTCATAT+GGG + chr3_2:58016190-58016209 Msa0413530:CDS 30.0%
TTGGAAGAATAAAGCAGAAA+AGG + chr3_2:58016728-58016747 Msa0413530:intron 30.0%
TGGAAGAATAAAGCAGAAAA+GGG + chr3_2:58016729-58016748 Msa0413530:intron 30.0%
!! TTCTCTTTGAGAAGTATTAG+AGG + chr3_2:58016773-58016792 Msa0413530:intron 30.0%
!! TTTTTGGTGATAGAATGTTG+AGG - chr3_2:58016799-58016818 None:intergenic 30.0%
TAAAGCAGAAAAGAGGTAAT+AGG + chr3_2:58016884-58016903 Msa0413530:intron 30.0%
! ACAAAATGTCTAGAATGTTG+AGG - chr3_2:58016945-58016964 None:intergenic 30.0%
TGATGAAAACGGAAAAAACA+AGG + chr3_2:58017164-58017183 Msa0413530:CDS 30.0%
GATGAAAACGGAAAAAACAA+GGG + chr3_2:58017165-58017184 Msa0413530:CDS 30.0%
TTACAAAATCAGTGTTGCAA+TGG + chr3_2:58017367-58017386 Msa0413530:CDS 30.0%
TTAAGCATAAATGTCGTAAG+TGG + chr3_2:58017581-58017600 Msa0413530:intron 30.0%
TAAGCATAAATGTCGTAAGT+GGG + chr3_2:58017582-58017601 Msa0413530:intron 30.0%
ACGTTATGATGATTAGAAGA+TGG - chr3_2:58017621-58017640 None:intergenic 30.0%
!!! TTTGTTTTATAGGGGCAATA+GGG + chr3_2:58017840-58017859 Msa0413530:intron 30.0%
! GTTTTATGTACTGTGAAATG+TGG + chr3_2:58017965-58017984 Msa0413530:three_prime_UTR 30.0%
GATTTATTATTTCAGTTGGC+TGG + chr3_2:58017995-58018014 Msa0413530:three_prime_UTR 30.0%
!!! GTGGGTTTTGATTTTAATCA+GGG + chr3_2:58018102-58018121 Msa0413530:intron 30.0%
!! AATGTTTTTATAGAGGCATG+TGG + chr3_2:58018142-58018161 Msa0413530:intron 30.0%
!! TAAGGTAGGTTGATTATTTC+AGG + chr3_2:58018187-58018206 Msa0413530:three_prime_UTR 30.0%
CTATTCATTAATTCATTCGC+TGG - chr3_2:58018327-58018346 None:intergenic 30.0%
AAACAGAATCACTAATATCC+TGG - chr3_2:58018423-58018442 None:intergenic 30.0%
!!! AACACTTTTAAAGTCTGTTG+AGG - chr3_2:58018640-58018659 None:intergenic 30.0%
CTAAAATTAACCTGTTGATG+TGG + chr3_2:58019016-58019035 Msa0413530:three_prime_UTR 30.0%
TGCATGTTATATCTTTCCAT+CGG + chr3_2:58019048-58019067 Msa0413530:three_prime_UTR 30.0%
!! GATTTTTCGGTGAGTTATTT+TGG + chr3_2:58019212-58019231 Msa0413530:three_prime_UTR 30.0%
ATTCTTATACACCCATCAAT+TGG + chr3_2:58019290-58019309 Msa0413530:three_prime_UTR 30.0%
! CAAAATTGACTTCCAATTGA+TGG - chr3_2:58019305-58019324 None:intergenic 30.0%
CTATTGCTAAAAAAATAGGG+GGG - chr3_2:58019495-58019514 None:intergenic 30.0%
! ATGATGAGCTAGATTTTAAG+TGG + chr3_2:58019548-58019567 Msa0413530:three_prime_UTR 30.0%
!! TGATGAGCTAGATTTTAAGT+GGG + chr3_2:58019549-58019568 Msa0413530:three_prime_UTR 30.0%
! TTGCTTTCTTTTTCTTTGGT+AGG + chr3_2:58019586-58019605 Msa0413530:three_prime_UTR 30.0%
! CATTTGGTAATTCAAGTAAC+TGG - chr3_2:58019714-58019733 None:intergenic 30.0%
GAACGAAAAGTTATGACATT+TGG - chr3_2:58019730-58019749 None:intergenic 30.0%
AAATCTCACTTTCTCTCTTG+TGG + chr3_2:58014703-58014722 Msa0413530:five_prime_UTR 35.0%
TATCGTGTCTTTAATTGCTG+TGG + chr3_2:58015106-58015125 Msa0413530:intron 35.0%
! GGATTGACCTGATTTTAAAC+AGG + chr3_2:58015127-58015146 Msa0413530:intron 35.0%
! TTGACCTGATTTTAAACAGG+CGG + chr3_2:58015130-58015149 Msa0413530:intron 35.0%
ATTCACATAGTTTGGAGACA+TGG - chr3_2:58015318-58015337 None:intergenic 35.0%
ACTGCAGGAACTAAATTGAT+GGG - chr3_2:58015373-58015392 None:intergenic 35.0%
AACTGCAGGAACTAAATTGA+TGG - chr3_2:58015374-58015393 None:intergenic 35.0%
GTTCCTGCAGTTAAGATATT+AGG + chr3_2:58015382-58015401 Msa0413530:intron 35.0%
TCCTGCAGTTAAGATATTAG+GGG + chr3_2:58015384-58015403 Msa0413530:intron 35.0%
AAATCGGAGAGTGATAGTTT+AGG + chr3_2:58015655-58015674 Msa0413530:intron 35.0%
AATCGGAGAGTGATAGTTTA+GGG + chr3_2:58015656-58015675 Msa0413530:intron 35.0%
GGAACAATAACTTTGCTAGA+AGG + chr3_2:58015776-58015795 Msa0413530:CDS 35.0%
! ATAATTTGCATTCCCACCAT+AGG - chr3_2:58016124-58016143 None:intergenic 35.0%
! TATGGTGGGAATGCAAATTA+TGG + chr3_2:58016123-58016142 Msa0413530:CDS 35.0%
TTCATATCCTCCTTCATATG+GGG + chr3_2:58016191-58016210 Msa0413530:CDS 35.0%
AATTCATCAACAGTCACATC+GGG - chr3_2:58016414-58016433 None:intergenic 35.0%
CAATTCATCAACAGTCACAT+CGG - chr3_2:58016415-58016434 None:intergenic 35.0%
! GATGAATTGCAGCAACTTTT+TGG + chr3_2:58016426-58016445 Msa0413530:CDS 35.0%
! AATGTTCTGATCTGTTGACT+TGG + chr3_2:58016464-58016483 Msa0413530:intron 35.0%
ATATAATCCTGTTGCACTTG+TGG + chr3_2:58016633-58016652 Msa0413530:intron 35.0%
! CTGCTTTATTCTTCCAACAT+AGG - chr3_2:58016725-58016744 None:intergenic 35.0%
GGAAGAATAAAGCAGAAAAG+GGG + chr3_2:58016730-58016749 Msa0413530:intron 35.0%
TAAAGCAGAAAAGGGGAAAT+AGG + chr3_2:58016737-58016756 Msa0413530:intron 35.0%
GGAAGAATAAAGCAGAAAAG+AGG + chr3_2:58016730-58016749 Msa0413530:intron 35.0%
TTCTCTTTGCGAAGAATTAG+AGG + chr3_2:58016919-58016938 Msa0413530:intron 35.0%
ATGTAACAGAACGTCTAGAA+TGG - chr3_2:58017062-58017081 None:intergenic 35.0%
TTGGAAGAATAAAGCAGAAG+AGG + chr3_2:58017100-58017119 Msa0413530:CDS 35.0%
TGGAAGAATAAAGCAGAAGA+GGG + chr3_2:58017101-58017120 Msa0413530:CDS 35.0%
AGAGGGGTTATAAAGATCAA+TGG + chr3_2:58017118-58017137 Msa0413530:CDS 35.0%
AGCATATCATTCATCTCCAA+CGG - chr3_2:58017460-58017479 None:intergenic 35.0%
! ATATGCTAACGTTGTCGATT+TGG + chr3_2:58017473-58017492 Msa0413530:intron 35.0%
AAGCATAAATGTCGTAAGTG+GGG + chr3_2:58017583-58017602 Msa0413530:intron 35.0%
!!! CTTTGTTTTATAGGGGCAAT+AGG + chr3_2:58017839-58017858 Msa0413530:intron 35.0%
!! TTGTTTTATAGGGGCAATAG+GGG + chr3_2:58017841-58017860 Msa0413530:intron 35.0%
! CAATGACAAAGCTCTAGTAT+GGG - chr3_2:58017942-58017961 None:intergenic 35.0%
! TCAATGACAAAGCTCTAGTA+TGG - chr3_2:58017943-58017962 None:intergenic 35.0%
TACTGTGAAATGTGGTCTAA+GGG + chr3_2:58017973-58017992 Msa0413530:three_prime_UTR 35.0%
CAGCTAACAACAGAAAAAAC+AGG - chr3_2:58018082-58018101 None:intergenic 35.0%
!!! CTGTTTTTTCTGTTGTTAGC+TGG + chr3_2:58018080-58018099 Msa0413530:intron 35.0%
!!! TTTTTTCTGTTGTTAGCTGG+TGG + chr3_2:58018083-58018102 Msa0413530:intron 35.0%
! TTTTTCTGTTGTTAGCTGGT+GGG + chr3_2:58018084-58018103 Msa0413530:intron 35.0%
!!! GGTGGGTTTTGATTTTAATC+AGG + chr3_2:58018101-58018120 Msa0413530:intron 35.0%
TCTCCAAATAATTGCTGCTA+AGG + chr3_2:58018169-58018188 Msa0413530:three_prime_UTR 35.0%
CTACCTTAGCAGCAATTATT+TGG - chr3_2:58018175-58018194 None:intergenic 35.0%
CAAATAATTGCTGCTAAGGT+AGG + chr3_2:58018173-58018192 Msa0413530:three_prime_UTR 35.0%
TTAAACCAAGTGTCATCATG+TGG + chr3_2:58018253-58018272 Msa0413530:three_prime_UTR 35.0%
TTTATCCACATGATGACACT+TGG - chr3_2:58018261-58018280 None:intergenic 35.0%
!! GACGAGTTTTGATAACTAAC+TGG + chr3_2:58018560-58018579 Msa0413530:three_prime_UTR 35.0%
AATATGCAAGTCTTCATCAG+AGG - chr3_2:58018743-58018762 None:intergenic 35.0%
!! AGTTGATCTTTTTGGGAACA+TGG + chr3_2:58018932-58018951 Msa0413530:three_prime_UTR 35.0%
GTTGTAGAAGTGAAATGCAT+TGG + chr3_2:58018954-58018973 Msa0413530:three_prime_UTR 35.0%
GTGAAACAAATATCAACCGA+TGG - chr3_2:58019067-58019086 None:intergenic 35.0%
!! TGACGAAGAAAGCATCAAAA+GGG - chr3_2:58019384-58019403 None:intergenic 35.0%
CTACAAGCTGAAATTGATTG+AGG + chr3_2:58019438-58019457 Msa0413530:three_prime_UTR 35.0%
TCCAGACATGATTCGATCTA+GGG - chr3_2:58014739-58014758 None:intergenic 40.0%
TAGATCGAATCATGTCTGGA+GGG + chr3_2:58014739-58014758 Msa0413530:exon 40.0%
GGATATAATAGAGGAGGAAG+TGG + chr3_2:58015871-58015890 Msa0413530:CDS 40.0%
TATAATAGAGGAGGAAGTGG+TGG + chr3_2:58015874-58015893 Msa0413530:CDS 40.0%
GGAAGGGGTAATAACAATGA+TGG + chr3_2:58015964-58015983 Msa0413530:CDS 40.0%
! AACAATGATGGAAGAAGTGG+AGG + chr3_2:58015976-58015995 Msa0413530:CDS 40.0%
! ACAATGATGGAAGAAGTGGA+GGG + chr3_2:58015977-58015996 Msa0413530:CDS 40.0%
TCATATCCTCCTTCATATGG+GGG + chr3_2:58016192-58016211 Msa0413530:CDS 40.0%
! GAATTGCAGCAACTTTTTGG+AGG + chr3_2:58016429-58016448 Msa0413530:CDS 40.0%
! CTGCTTTATTCTTCCAACCT+AGG - chr3_2:58016872-58016891 None:intergenic 40.0%
ATAAAGCAAAAAGGGGTAGC+AGG + chr3_2:58016996-58017015 Msa0413530:intron 40.0%
!! TTCTCTTTGGGAAGTATCAG+TGG + chr3_2:58017031-58017050 Msa0413530:intron 40.0%
! TACATGTGTTTTCACTGCCT+AGG + chr3_2:58017077-58017096 Msa0413530:intron 40.0%
! CTGCTTTATTCTTCCAACCT+AGG - chr3_2:58016872-58016891 None:intergenic 40.0%
GGAAGAATAAAGCAGAAGAG+GGG + chr3_2:58017102-58017121 Msa0413530:CDS 40.0%
! TCTGCTGGTGGTTTTTACAA+CGG + chr3_2:58017228-58017247 Msa0413530:CDS 40.0%
!! GTCGATTTGGATCGAAAACA+TGG + chr3_2:58017486-58017505 Msa0413530:intron 40.0%
GTACTGTGAAATGTGGTCTA+AGG + chr3_2:58017972-58017991 Msa0413530:three_prime_UTR 40.0%
TTCTTGAACTGGATGCTAAG+AGG + chr3_2:58018019-58018038 Msa0413530:three_prime_UTR 40.0%
GGATAAATGCTTTACATCCC+TGG + chr3_2:58018274-58018293 Msa0413530:three_prime_UTR 40.0%
TGCGCTTGAAACACACTAAA+TGG - chr3_2:58018390-58018409 None:intergenic 40.0%
!!! CAAGCGCAATTTGTTTTACC+AGG + chr3_2:58018402-58018421 Msa0413530:three_prime_UTR 40.0%
TACATGCTTCAAGATCTTCC+TGG - chr3_2:58018690-58018709 None:intergenic 40.0%
GGAAGATCTTGAAGCATGTA+TGG + chr3_2:58018690-58018709 Msa0413530:three_prime_UTR 40.0%
!! ATTATATTGGCTCATCGCGT+TGG + chr3_2:58019143-58019162 Msa0413530:three_prime_UTR 40.0%
!! TTATATTGGCTCATCGCGTT+GGG + chr3_2:58019144-58019163 Msa0413530:three_prime_UTR 40.0%
AAGACACACAACACTTCGAT+TGG - chr3_2:58019348-58019367 None:intergenic 40.0%
!! AATCGAAGTGTTGTGTGTCT+TGG + chr3_2:58019347-58019366 Msa0413530:three_prime_UTR 40.0%
TTGTGTGTCTTGGCATCTTA+CGG + chr3_2:58019357-58019376 Msa0413530:three_prime_UTR 40.0%
!! GTGACGAAGAAAGCATCAAA+AGG - chr3_2:58019385-58019404 None:intergenic 40.0%
AGCTGAAATTGATTGAGGAC+TGG + chr3_2:58019443-58019462 Msa0413530:three_prime_UTR 40.0%
AAAGACATTGCACCAAACAG+AGG - chr3_2:58019634-58019653 None:intergenic 40.0%
!! TCTGTTTGGTGCAATGTCTT+TGG + chr3_2:58019633-58019652 Msa0413530:three_prime_UTR 40.0%
ACCCTAGATCGAATCATGTC+TGG + chr3_2:58014735-58014754 Msa0413530:exon 45.0%
CTCCAGACATGATTCGATCT+AGG - chr3_2:58014740-58014759 None:intergenic 45.0%
CTAGATCGAATCATGTCTGG+AGG + chr3_2:58014738-58014757 Msa0413530:exon 45.0%
! TATGGTGCTAGTGGTGGTTA+CGG + chr3_2:58014801-58014820 Msa0413530:CDS 45.0%
! GGATATGGTGGGAATGAAAG+CGG + chr3_2:58014852-58014871 Msa0413530:CDS 45.0%
GGTTACGGAACAAAAGGAAG+CGG + chr3_2:58014879-58014898 Msa0413530:CDS 45.0%
GGAACAAAAGGAAGCGGAAA+CGG + chr3_2:58014885-58014904 Msa0413530:CDS 45.0%
! AGTGGATATGGTGGAAACGA+TGG + chr3_2:58014957-58014976 Msa0413530:CDS 45.0%
! ACCTGATTTTAAACAGGCGG+TGG + chr3_2:58015133-58015152 Msa0413530:intron 45.0%
! ACCACCGCCTGTTTAAAATC+AGG - chr3_2:58015137-58015156 None:intergenic 45.0%
! TGATTTTAAACAGGCGGTGG+TGG + chr3_2:58015136-58015155 Msa0413530:intron 45.0%
ATTGGCGTTGCCCTAATGAA+AGG + chr3_2:58015230-58015249 Msa0413530:CDS 45.0%
GCCCCTAATATCTTAACTGC+AGG - chr3_2:58015388-58015407 None:intergenic 45.0%
ATTACCACTGGTAGGACATG+GGG - chr3_2:58015824-58015843 None:intergenic 45.0%
CATTACCACTGGTAGGACAT+GGG - chr3_2:58015825-58015844 None:intergenic 45.0%
TCATTACCACTGGTAGGACA+TGG - chr3_2:58015826-58015845 None:intergenic 45.0%
GGAGGATATGACAATAACCG+AGG + chr3_2:58015895-58015914 Msa0413530:CDS 45.0%
GGATATGACAATAACCGAGG+AGG + chr3_2:58015898-58015917 Msa0413530:CDS 45.0%
ATGACAATAACCGAGGAGGT+AGG + chr3_2:58015902-58015921 Msa0413530:CDS 45.0%
AAGAAGTGGAGGGAGCAATA+GGG + chr3_2:58015987-58016006 Msa0413530:CDS 45.0%
GGTAATCAAGGCAGAGAAGA+TGG + chr3_2:58016024-58016043 Msa0413530:CDS 45.0%
AATCAAGGCAGAGAAGATGG+TGG + chr3_2:58016027-58016046 Msa0413530:CDS 45.0%
TTTGCATTCCCACCATAGGT+GGG - chr3_2:58016120-58016139 None:intergenic 45.0%
ATTTGCATTCCCACCATAGG+TGG - chr3_2:58016121-58016140 None:intergenic 45.0%
! ATAGCTTGTAGGTGGAGGAA+CGG - chr3_2:58016157-58016176 None:intergenic 45.0%
TCCTTCATATGGGGGTAACA+CGG + chr3_2:58016200-58016219 Msa0413530:CDS 45.0%
GGATATGACAGTGGTAATCG+CGG + chr3_2:58016276-58016295 Msa0413530:CDS 45.0%
AAGCAGTGCGATGAGAATTG+TGG + chr3_2:58016345-58016364 Msa0413530:CDS 45.0%
!! CAGCAACTTTTTGGAGGCAT+TGG + chr3_2:58016435-58016454 Msa0413530:CDS 45.0%
CCTATTACCACAAGTGCAAC+AGG - chr3_2:58016643-58016662 None:intergenic 45.0%
CCTGTTGCACTTGTGGTAAT+AGG + chr3_2:58016640-58016659 Msa0413530:intron 45.0%
!!! TACACGCGTTTTAACTGCCT+AGG + chr3_2:58016852-58016871 Msa0413530:intron 45.0%
! ACAGAACGTCTAGAATGGTG+AGG - chr3_2:58017057-58017076 None:intergenic 45.0%
! TGTGTTTTCACTGCCTAGGT+TGG + chr3_2:58017081-58017100 Msa0413530:intron 45.0%
CTCCTCCAGCAAATAACCAT+GGG + chr3_2:58017411-58017430 Msa0413530:CDS 45.0%
! TACCCATGGTTATTTGCTGG+AGG - chr3_2:58017416-58017435 None:intergenic 45.0%
GCATACCCATGGTTATTTGC+TGG - chr3_2:58017419-58017438 None:intergenic 45.0%
CAGTGTGTAATGCATACCCA+TGG - chr3_2:58017430-58017449 None:intergenic 45.0%
CATGGGTATGCATTACACAC+TGG + chr3_2:58017428-58017447 Msa0413530:intron 45.0%
TACACACTGGATCTATCCGT+TGG + chr3_2:58017441-58017460 Msa0413530:intron 45.0%
! TTTTATAGGGGCAATAGGGG+TGG + chr3_2:58017844-58017863 Msa0413530:intron 45.0%
GAGACAATTCTGGTCCTGAT+AGG + chr3_2:58017887-58017906 Msa0413530:CDS 45.0%
ACAATTCTGGTCCTGATAGG+CGG + chr3_2:58017890-58017909 Msa0413530:CDS 45.0%
!! AGTTGGCTGGTTTCTTGAAC+TGG + chr3_2:58018008-58018027 Msa0413530:three_prime_UTR 45.0%
TGAACTGGATGCTAAGAGGT+AGG + chr3_2:58018023-58018042 Msa0413530:intron 45.0%
CAGAAAAAACAGGAGCGAAG+AGG - chr3_2:58018072-58018091 None:intergenic 45.0%
AATGATGCTCCCACATCAAC+AGG - chr3_2:58019029-58019048 None:intergenic 45.0%
TCTTCGTCACATTTCTCCTC+AGG + chr3_2:58019395-58019414 Msa0413530:three_prime_UTR 45.0%
TGGTTCATGTGTCCTCTGTT+TGG + chr3_2:58019619-58019638 Msa0413530:three_prime_UTR 45.0%
!! TATAATTACTATTATTATAT+TGG + chr3_2:58019130-58019149 Msa0413530:three_prime_UTR 5.0%
CGAATCATGTCTGGAGGGTA+CGG + chr3_2:58014744-58014763 Msa0413530:exon 50.0%
CCACCACTAGCACCATAAGA+CGG - chr3_2:58014798-58014817 None:intergenic 50.0%
! GCTATGCTGGTGGATATGGT+GGG + chr3_2:58014841-58014860 Msa0413530:CDS 50.0%
! TATGGTGGGAATGAAAGCGG+CGG + chr3_2:58014855-58014874 Msa0413530:CDS 50.0%
AATGAAAGCGGCGGTGGTTA+CGG + chr3_2:58014864-58014883 Msa0413530:CDS 50.0%
ACAAAAGGAAGCGGAAACGG+TGG + chr3_2:58014888-58014907 Msa0413530:CDS 50.0%
AGAGGCTATGGAGGTAACGA+TGG + chr3_2:58014915-58014934 Msa0413530:CDS 50.0%
! TATGGAGGTAACGATGGTGG+AGG + chr3_2:58014921-58014940 Msa0413530:CDS 50.0%
!! GGTAACGATGGTGGAGGTTA+CGG + chr3_2:58014927-58014946 Msa0413530:CDS 50.0%
TACGGTGGAAGGAGTGGATA+TGG + chr3_2:58014945-58014964 Msa0413530:CDS 50.0%
! GGATATGGTGGAAACGATGG+CGG + chr3_2:58014960-58014979 Msa0413530:CDS 50.0%
!! TTTTAAACAGGCGGTGGTGG+TGG + chr3_2:58015139-58015158 Msa0413530:intron 50.0%
TTTCAAGGTGGAGATCGTGG+TGG + chr3_2:58015163-58015182 Msa0413530:CDS 50.0%
GAAGTGGCAGAGATGGAGAT+TGG + chr3_2:58015212-58015231 Msa0413530:CDS 50.0%
GGAGGCGGTGGATATAATAG+AGG + chr3_2:58015862-58015881 Msa0413530:CDS 50.0%
GGCGGTGGATATAATAGAGG+AGG + chr3_2:58015865-58015884 Msa0413530:CDS 50.0%
AATAGAGGAGGAAGTGGTGG+AGG + chr3_2:58015877-58015896 Msa0413530:CDS 50.0%
AGTTCTCAGACCTACCTCCT+CGG - chr3_2:58015915-58015934 None:intergenic 50.0%
GGAGGTAGGTCTGAGAACTA+TGG + chr3_2:58015916-58015935 Msa0413530:CDS 50.0%
GGTAGGTCTGAGAACTATGG+AGG + chr3_2:58015919-58015938 Msa0413530:CDS 50.0%
GAAGAAGTGGAGGGAGCAAT+AGG + chr3_2:58015986-58016005 Msa0413530:CDS 50.0%
AGAAGTGGAGGGAGCAATAG+GGG + chr3_2:58015988-58016007 Msa0413530:CDS 50.0%
GGAAACTATCCACCCACCTA+TGG + chr3_2:58016105-58016124 Msa0413530:CDS 50.0%
AACTATCCACCCACCTATGG+TGG + chr3_2:58016108-58016127 Msa0413530:CDS 50.0%
ACTATCCACCCACCTATGGT+GGG + chr3_2:58016109-58016128 Msa0413530:CDS 50.0%
! CCAGTATAGCTTGTAGGTGG+AGG - chr3_2:58016162-58016181 None:intergenic 50.0%
CCTCCACCTACAAGCTATAC+TGG + chr3_2:58016159-58016178 Msa0413530:CDS 50.0%
! CCACCAGTATAGCTTGTAGG+TGG - chr3_2:58016165-58016184 None:intergenic 50.0%
CCACCTACAAGCTATACTGG+TGG + chr3_2:58016162-58016181 Msa0413530:CDS 50.0%
! GGTCCACCAGTATAGCTTGT+AGG - chr3_2:58016168-58016187 None:intergenic 50.0%
GTGTTACCCCCATATGAAGG+AGG - chr3_2:58016201-58016220 None:intergenic 50.0%
CCTTCATATGGGGGTAACAC+GGG + chr3_2:58016201-58016220 Msa0413530:CDS 50.0%
! GTTATGGTGGAGGTGATGCA+CGG + chr3_2:58016226-58016245 Msa0413530:CDS 50.0%
CCACTGTCATATCCAGCTTG+AGG - chr3_2:58016270-58016289 None:intergenic 50.0%
CCTCAAGCTGGATATGACAG+TGG + chr3_2:58016267-58016286 Msa0413530:CDS 50.0%
TATGACAGTGGTAATCGCGG+TGG + chr3_2:58016279-58016298 Msa0413530:CDS 50.0%
! AGTGGTAATCGCGGTGGATT+TGG + chr3_2:58016285-58016304 Msa0413530:CDS 50.0%
TTCTCATCGCACTGCTTCAC+CGG - chr3_2:58016342-58016361 None:intergenic 50.0%
TCATCAACAGTCACATCGGG+TGG - chr3_2:58016411-58016430 None:intergenic 50.0%
!!! CGCGTTTTAACTGCCTAGGT+TGG + chr3_2:58016856-58016875 Msa0413530:intron 50.0%
CAGAGGGATCTTCGTAAGCA+AGG - chr3_2:58017200-58017219 None:intergenic 50.0%
TGCTTACGAAGATCCCTCTG+CGG + chr3_2:58017200-58017219 Msa0413530:CDS 50.0%
TGGCAGAGAAATCTGCACCA+AGG + chr3_2:58017387-58017406 Msa0413530:CDS 50.0%
GGCAGAGAAATCTGCACCAA+GGG + chr3_2:58017388-58017407 Msa0413530:CDS 50.0%
! TTATTTGCTGGAGGAGCCCT+TGG - chr3_2:58017407-58017426 None:intergenic 50.0%
GCTCCTCCAGCAAATAACCA+TGG + chr3_2:58017410-58017429 Msa0413530:CDS 50.0%
GATAGGCGCAGAGACAATTC+TGG + chr3_2:58017877-58017896 Msa0413530:CDS 50.0%
CAATTCTGGTCCTGATAGGC+GGG + chr3_2:58017891-58017910 Msa0413530:CDS 50.0%
CCATAATGATCCCGCCTATC+AGG - chr3_2:58017904-58017923 None:intergenic 50.0%
CCTGATAGGCGGGATCATTA+TGG + chr3_2:58017901-58017920 Msa0413530:CDS 50.0%
GATAGGCGGGATCATTATGG+CGG + chr3_2:58017904-58017923 Msa0413530:CDS 50.0%
ATAGGCGGGATCATTATGGC+GGG + chr3_2:58017905-58017924 Msa0413530:CDS 50.0%
GCTTGTACCAGATGCCACAT+GGG - chr3_2:58018305-58018324 None:intergenic 50.0%
CGATTGGAAAGAAGCAGCAG+AGG - chr3_2:58019332-58019351 None:intergenic 50.0%
TGTCAAGTGTTCACAGCCTG+AGG - chr3_2:58019414-58019433 None:intergenic 50.0%
CTTTGGTAGGTCTTCCAGAC+TGG + chr3_2:58019599-58019618 Msa0413530:three_prime_UTR 50.0%
AGAGGACACATGAACCAGTC+TGG - chr3_2:58019616-58019635 None:intergenic 50.0%
CCACTAGCACCATAAGACGG+TGG - chr3_2:58014795-58014814 None:intergenic 55.0%
! CCACCGTCTTATGGTGCTAG+TGG + chr3_2:58014792-58014811 Msa0413530:CDS 55.0%
! CCGTCTTATGGTGCTAGTGG+TGG + chr3_2:58014795-58014814 Msa0413530:CDS 55.0%
! GGTGGCTATGCTGGTGGATA+TGG + chr3_2:58014837-58014856 Msa0413530:CDS 55.0%
! GGCTATGCTGGTGGATATGG+TGG + chr3_2:58014840-58014859 Msa0413530:CDS 55.0%
GGCGGTGGTTACGGAACAAA+AGG + chr3_2:58014873-58014892 Msa0413530:CDS 55.0%
AAAGGAAGCGGAAACGGTGG+TGG + chr3_2:58014891-58014910 Msa0413530:CDS 55.0%
!! AACGGTGGTGGAAGAGGCTA+TGG + chr3_2:58014903-58014922 Msa0413530:CDS 55.0%
GGCTATGGAGGTAACGATGG+TGG + chr3_2:58014918-58014937 Msa0413530:CDS 55.0%
!! AACGATGGTGGAGGTTACGG+TGG + chr3_2:58014930-58014949 Msa0413530:CDS 55.0%
! ATGGTGGAGGTTACGGTGGA+AGG + chr3_2:58014934-58014953 Msa0413530:CDS 55.0%
GGTGGAAGGAGTGGATATGG+TGG + chr3_2:58014948-58014967 Msa0413530:CDS 55.0%
! TATGGTGGAAACGATGGCGG+AGG + chr3_2:58014963-58014982 Msa0413530:CDS 55.0%
!! ATGGTGGAAACGATGGCGGA+GGG + chr3_2:58014964-58014983 Msa0413530:CDS 55.0%
GGCTTTCAAGGTGGAGATCG+TGG + chr3_2:58015160-58015179 Msa0413530:CDS 55.0%
! CCTACCAGTGGTAATGACCG+CGG + chr3_2:58015829-58015848 Msa0413530:CDS 55.0%
AGCAATAGGGGTGGCTCGTA+TGG + chr3_2:58016000-58016019 Msa0413530:CDS 55.0%
AATAGGGGTGGCTCGTATGG+CGG + chr3_2:58016003-58016022 Msa0413530:CDS 55.0%
GGCTCGTATGGCGGTAATCA+AGG + chr3_2:58016012-58016031 Msa0413530:CDS 55.0%
! GGCAGAGAAGATGGTGGCTA+TGG + chr3_2:58016033-58016052 Msa0413530:CDS 55.0%
TACGACTGAGCAGCAGCAAC+AGG - chr3_2:58016072-58016091 None:intergenic 55.0%
GTTGCTGCTGCTCAGTCGTA+TGG + chr3_2:58016072-58016091 Msa0413530:CDS 55.0%
CCCGTGTTACCCCCATATGA+AGG - chr3_2:58016204-58016223 None:intergenic 55.0%
TCATATGGGGGTAACACGGG+TGG + chr3_2:58016204-58016223 Msa0413530:CDS 55.0%
GGTAACACGGGTGGTTATGG+TGG + chr3_2:58016213-58016232 Msa0413530:CDS 55.0%
AACACGGGTGGTTATGGTGG+AGG + chr3_2:58016216-58016235 Msa0413530:CDS 55.0%
! GGTAATCGCGGTGGATTTGG+TGG + chr3_2:58016288-58016307 Msa0413530:CDS 55.0%
GGCTTGTACCAGATGCCACA+TGG - chr3_2:58018306-58018325 None:intergenic 55.0%
GGTGCTAGTGGTGGTTACGG+AGG + chr3_2:58014804-58014823 Msa0413530:CDS 60.0%
GCTAGTGGTGGTTACGGAGG+CGG + chr3_2:58014807-58014826 Msa0413530:CDS 60.0%
!! AGCGGAAACGGTGGTGGAAG+AGG + chr3_2:58014897-58014916 Msa0413530:CDS 60.0%
!! GGTGGTGGAAGAGGCTATGG+AGG + chr3_2:58014906-58014925 Msa0413530:CDS 60.0%
GGAGGTTACGGTGGAAGGAG+TGG + chr3_2:58014939-58014958 Msa0413530:CDS 60.0%
!! GGAAACGATGGCGGAGGGTA+TGG + chr3_2:58014969-58014988 Msa0413530:CDS 60.0%
!! AACGATGGCGGAGGGTATGG+TGG + chr3_2:58014972-58014991 Msa0413530:CDS 60.0%
! GGAGGGTATGGTGGAAGAGG+CGG + chr3_2:58014981-58015000 Msa0413530:CDS 60.0%
! TATGGTGGAAGAGGCGGTGG+TGG + chr3_2:58014987-58015006 Msa0413530:CDS 60.0%
!! GGTGGTGGTGGTGGAGGATA+TGG + chr3_2:58015023-58015042 Msa0413530:CDS 60.0%
!! GGTGGTGGTGGAGGATATGG+AGG + chr3_2:58015026-58015045 Msa0413530:CDS 60.0%
GGTGGAGGATATGGAGGTCG+AGG + chr3_2:58015032-58015051 Msa0413530:CDS 60.0%
!! GGTGGTGGTGGCTTTCAAGG+TGG + chr3_2:58015151-58015170 Msa0413530:CDS 60.0%
! CGTGGTGGAAGTGGCAGAGA+TGG + chr3_2:58015205-58015224 Msa0413530:CDS 60.0%
GGTACCCCATGTCCTACCAG+TGG + chr3_2:58015817-58015836 Msa0413530:CDS 60.0%
CCGCGGTCATTACCACTGGT+AGG - chr3_2:58015832-58015851 None:intergenic 60.0%
! ACCAGTGGTAATGACCGCGG+TGG + chr3_2:58015832-58015851 Msa0413530:CDS 60.0%
! AGTGGTAATGACCGCGGTGG+CGG + chr3_2:58015835-58015854 Msa0413530:CDS 60.0%
AGTGGAGGGAGCAATAGGGG+TGG + chr3_2:58015991-58016010 Msa0413530:CDS 60.0%
!! CAGCAACAGGAGGAGGTGCT+TGG - chr3_2:58016059-58016078 None:intergenic 60.0%
TGAGCAGCAGCAACAGGAGG+AGG - chr3_2:58016066-58016085 None:intergenic 60.0%
GACTGAGCAGCAGCAACAGG+AGG - chr3_2:58016069-58016088 None:intergenic 60.0%
GCTGCTGCTCAGTCGTATGG+TGG + chr3_2:58016075-58016094 Msa0413530:CDS 60.0%
! GCTCAGTCGTATGGTGGTGC+TGG + chr3_2:58016081-58016100 Msa0413530:CDS 60.0%
! CAGTCGTATGGTGGTGCTGG+TGG + chr3_2:58016084-58016103 Msa0413530:CDS 60.0%
GCATTCCCACCATAGGTGGG+TGG - chr3_2:58016117-58016136 None:intergenic 60.0%
GGGGGTAACACGGGTGGTTA+TGG + chr3_2:58016210-58016229 Msa0413530:CDS 60.0%
TGATGCACGGAGTGGTGGCA+GGG + chr3_2:58016239-58016258 Msa0413530:CDS 60.0%
AGGGGCAATAGGGGTGGCTA+TGG + chr3_2:58017850-58017869 Msa0413530:intron 60.0%
GGCAATAGGGGTGGCTATGG+TGG + chr3_2:58017853-58017872 Msa0413530:CDS 60.0%
! GGGGTGGCTATGGTGGAGAT+AGG + chr3_2:58017860-58017879 Msa0413530:CDS 60.0%
ATGCCACATGGGACGAGCCA+GGG - chr3_2:58018294-58018313 None:intergenic 60.0%
ACTGGCTGTCGAGCAGCTCA+AGG + chr3_2:58018578-58018597 Msa0413530:three_prime_UTR 60.0%
! GGAGGGTACGGTCACGATGC+CGG + chr3_2:58014756-58014775 Msa0413530:CDS 65.0%
TACGGTCACGATGCCGGAGG+TGG + chr3_2:58014762-58014781 Msa0413530:CDS 65.0%
GGCTCTGCGCCACCGTCTTA+TGG + chr3_2:58014783-58014802 Msa0413530:CDS 65.0%
AGTGGTGGTTACGGAGGCGG+AGG + chr3_2:58014810-58014829 Msa0413530:CDS 65.0%
! GGAGGAGGTGGTGGCTATGC+TGG + chr3_2:58014828-58014847 Msa0413530:CDS 65.0%
! GGAGGTGGTGGCTATGCTGG+TGG + chr3_2:58014831-58014850 Msa0413530:CDS 65.0%
GGTGGGAATGAAAGCGGCGG+TGG + chr3_2:58014858-58014877 Msa0413530:CDS 65.0%
! GGCGGAGGGTATGGTGGAAG+AGG + chr3_2:58014978-58014997 Msa0413530:CDS 65.0%
! GGGTATGGTGGAAGAGGCGG+TGG + chr3_2:58014984-58015003 Msa0413530:CDS 65.0%
!! GGTGGTGGTGGTGGTAGAGG+AGG + chr3_2:58015002-58015021 Msa0413530:CDS 65.0%
!! GGTGGTGGTGGTAGAGGAGG+TGG + chr3_2:58015005-58015024 Msa0413530:CDS 65.0%
! GGTGGTGGTAGAGGAGGTGG+TGG + chr3_2:58015008-58015027 Msa0413530:CDS 65.0%
! GGTGGTAGAGGAGGTGGTGG+TGG + chr3_2:58015011-58015030 Msa0413530:CDS 65.0%
!! GGTAGAGGAGGTGGTGGTGG+TGG + chr3_2:58015014-58015033 Msa0413530:CDS 65.0%
!! AGAGGAGGTGGTGGTGGTGG+AGG + chr3_2:58015017-58015036 Msa0413530:CDS 65.0%
!! GGCGGTGGTGGTGGCTTTCA+AGG + chr3_2:58015148-58015167 Msa0413530:intron 65.0%
CACGACCTCCACCACCACCT+CGG - chr3_2:58015189-58015208 None:intergenic 65.0%
! GGTGGAGGTCGTGGTGGAAG+TGG + chr3_2:58015196-58015215 Msa0413530:CDS 65.0%
GCCACCGCGGTCATTACCAC+TGG - chr3_2:58015836-58015855 None:intergenic 65.0%
GGTGGAGGTGATGCACGGAG+TGG + chr3_2:58016231-58016250 Msa0413530:CDS 65.0%
GGAGGTGATGCACGGAGTGG+TGG + chr3_2:58016234-58016253 Msa0413530:CDS 65.0%
GTGATGCACGGAGTGGTGGC+AGG + chr3_2:58016238-58016257 Msa0413530:CDS 65.0%
TCCTGCTGAGCCAGCTCCAG+CGG + chr3_2:58016314-58016333 Msa0413530:CDS 65.0%
CCAGCAGAGTGAGCCGCAGA+GGG - chr3_2:58017216-58017235 None:intergenic 65.0%
ACCAGCAGAGTGAGCCGCAG+AGG - chr3_2:58017217-58017236 None:intergenic 65.0%
TCTGCGGCTCACTCTGCTGG+TGG + chr3_2:58017216-58017235 Msa0413530:CDS 65.0%
! CATCCCTGGCTCGTCCCATG+TGG + chr3_2:58018288-58018307 Msa0413530:three_prime_UTR 65.0%
GATGCCACATGGGACGAGCC+AGG - chr3_2:58018295-58018314 None:intergenic 65.0%
GGCTCGTCCCATGTGGCATC+TGG + chr3_2:58018295-58018314 Msa0413530:three_prime_UTR 65.0%
GGGTACGGTCACGATGCCGG+AGG + chr3_2:58014759-58014778 Msa0413530:CDS 70.0%
GGTGGTTACGGAGGCGGAGG+AGG + chr3_2:58014813-58014832 Msa0413530:CDS 70.0%
GGTTACGGAGGCGGAGGAGG+TGG + chr3_2:58014816-58014835 Msa0413530:CDS 70.0%
TACGGAGGCGGAGGAGGTGG+TGG + chr3_2:58014819-58014838 Msa0413530:CDS 70.0%
! GGTGGAAGAGGCGGTGGTGG+TGG + chr3_2:58014990-58015009 Msa0413530:CDS 70.0%
!! GGAAGAGGCGGTGGTGGTGG+TGG + chr3_2:58014993-58015012 Msa0413530:CDS 70.0%
!! GGCGGTGGTGGTGGTGGTAG+AGG + chr3_2:58014999-58015018 Msa0413530:CDS 70.0%
GGTGGAGATCGTGGTGGCCG+AGG + chr3_2:58015169-58015188 Msa0413530:CDS 70.0%
GGAGATCGTGGTGGCCGAGG+TGG + chr3_2:58015172-58015191 Msa0413530:CDS 70.0%
GATCGTGGTGGCCGAGGTGG+TGG + chr3_2:58015175-58015194 Msa0413530:CDS 70.0%
!! CGAGGTGGTGGTGGAGGTCG+TGG + chr3_2:58015187-58015206 Msa0413530:CDS 70.0%
!! GGTGGTGGTGGAGGTCGTGG+TGG + chr3_2:58015190-58015209 Msa0413530:CDS 70.0%
! GGTAATGACCGCGGTGGCGG+TGG + chr3_2:58015838-58015857 Msa0413530:CDS 70.0%
! AATGACCGCGGTGGCGGTGG+TGG + chr3_2:58015841-58015860 Msa0413530:CDS 70.0%
TGAGCCAGCTCCAGCGGCTC+CGG + chr3_2:58016320-58016339 Msa0413530:CDS 70.0%
TTCACCGGAGCCGCTGGAGC+TGG - chr3_2:58016327-58016346 None:intergenic 70.0%
CACTGCTTCACCGGAGCCGC+TGG - chr3_2:58016333-58016352 None:intergenic 70.0%
CCCTCTGCGGCTCACTCTGC+TGG + chr3_2:58017213-58017232 Msa0413530:CDS 70.0%
CGGTGGCGCAGAGCCACCTC+CGG - chr3_2:58014778-58014797 None:intergenic 75.0%
! CGTGGTGGCCGAGGTGGTGG+TGG + chr3_2:58015178-58015197 Msa0413530:CDS 75.0%
!! GGTGGCCGAGGTGGTGGTGG+AGG + chr3_2:58015181-58015200 Msa0413530:CDS 75.0%
GGCAGGGCTGCGCCTCAAGC+TGG + chr3_2:58016255-58016274 Msa0413530:CDS 75.0%
! GCCGCTGGAGCTGGCTCAGC+AGG - chr3_2:58016318-58016337 None:intergenic 75.0%
!! GACCGCGGTGGCGGTGGTGG+AGG + chr3_2:58015844-58015863 Msa0413530:CDS 80.0%
! CGCCTCCACCACCGCCACCG+CGG - chr3_2:58015849-58015868 None:intergenic 80.0%
!!! CGCGGTGGCGGTGGTGGAGG+CGG + chr3_2:58015847-58015866 Msa0413530:CDS 80.0%
!!! GGTGGCGGTGGTGGAGGCGG+TGG + chr3_2:58015850-58015869 Msa0413530:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 58014682 58019785 58014682 ID=Msa0413530;Name=Msa0413530
chr3_2 mRNA 58014682 58019785 58014682 ID=Msa0413530-mRNA-1;Parent=Msa0413530;Name=Msa0413530-mRNA-1;_AED=0.03;_eAED=0.03;_QI=68|1|1|1|0.83|0.71|7|1723|475
chr3_2 exon 58014682 58015053 58014682 ID=Msa0413530-mRNA-1:exon:11982;Parent=Msa0413530-mRNA-1
chr3_2 exon 58015149 58015251 58015149 ID=Msa0413530-mRNA-1:exon:11983;Parent=Msa0413530-mRNA-1
chr3_2 exon 58015771 58016461 58015771 ID=Msa0413530-mRNA-1:exon:11984;Parent=Msa0413530-mRNA-1
chr3_2 exon 58017099 58017249 58017099 ID=Msa0413530-mRNA-1:exon:11985;Parent=Msa0413530-mRNA-1
chr3_2 exon 58017351 58017432 58017351 ID=Msa0413530-mRNA-1:exon:11986;Parent=Msa0413530-mRNA-1
chr3_2 exon 58017852 58018040 58017852 ID=Msa0413530-mRNA-1:exon:11987;Parent=Msa0413530-mRNA-1
chr3_2 exon 58018155 58019785 58018155 ID=Msa0413530-mRNA-1:exon:11988;Parent=Msa0413530-mRNA-1
chr3_2 five_prime_UTR 58014682 58014749 58014682 ID=Msa0413530-mRNA-1:five_prime_utr;Parent=Msa0413530-mRNA-1
chr3_2 CDS 58014750 58015053 58014750 ID=Msa0413530-mRNA-1:cds;Parent=Msa0413530-mRNA-1
chr3_2 CDS 58015149 58015251 58015149 ID=Msa0413530-mRNA-1:cds;Parent=Msa0413530-mRNA-1
chr3_2 CDS 58015771 58016461 58015771 ID=Msa0413530-mRNA-1:cds;Parent=Msa0413530-mRNA-1
chr3_2 CDS 58017099 58017249 58017099 ID=Msa0413530-mRNA-1:cds;Parent=Msa0413530-mRNA-1
chr3_2 CDS 58017351 58017432 58017351 ID=Msa0413530-mRNA-1:cds;Parent=Msa0413530-mRNA-1
chr3_2 CDS 58017852 58017948 58017852 ID=Msa0413530-mRNA-1:cds;Parent=Msa0413530-mRNA-1
chr3_2 three_prime_UTR 58017949 58018040 58017949 ID=Msa0413530-mRNA-1:three_prime_utr;Parent=Msa0413530-mRNA-1
chr3_2 three_prime_UTR 58018155 58019785 58018155 ID=Msa0413530-mRNA-1:three_prime_utr;Parent=Msa0413530-mRNA-1
Gene Sequence

>Msa0413530

ATGTCTGGAGGGTACGGTCACGATGCCGGAGGTGGCTCTGCGCCACCGTCTTATGGTGCTAGTGGTGGTTACGGAGGCGGAGGAGGTGGTGGCTATGCTGGTGGATATGGTGGGAATGAAAGCGGCGGTGGTTACGGAACAAAAGGAAGCGGAAACGGTGGTGGAAGAGGCTATGGAGGTAACGATGGTGGAGGTTACGGTGGAAGGAGTGGATATGGTGGAAACGATGGCGGAGGGTATGGTGGAAGAGGCGGTGGTGGTGGTGGTAGAGGAGGTGGTGGTGGTGGAGGATATGGAGGTCGAGGCGGTGGTGGTGGCTTTCAAGGTGGAGATCGTGGTGGCCGAGGTGGTGGTGGAGGTCGTGGTGGAAGTGGCAGAGATGGAGATTGGCGTTGCCCTAATGAAAGTTGTGGGAACAATAACTTTGCTAGAAGGAATGAATGTAACAAATGTGGTACCCCATGTCCTACCAGTGGTAATGACCGCGGTGGCGGTGGTGGAGGCGGTGGATATAATAGAGGAGGAAGTGGTGGAGGATATGACAATAACCGAGGAGGTAGGTCTGAGAACTATGGAGGTAGAACTAATGATTATAATGGTGGAAGGGGTAATAACAATGATGGAAGAAGTGGAGGGAGCAATAGGGGTGGCTCGTATGGCGGTAATCAAGGCAGAGAAGATGGTGGCTATGGCCAAGCACCTCCTCCTGTTGCTGCTGCTCAGTCGTATGGTGGTGCTGGTGGAAACTATCCACCCACCTATGGTGGGAATGCAAATTATGGAACAGATGCCGTTCCTCCACCTACAAGCTATACTGGTGGACCTAATTCATATCCTCCTTCATATGGGGGTAACACGGGTGGTTATGGTGGAGGTGATGCACGGAGTGGTGGCAGGGCTGCGCCTCAAGCTGGATATGACAGTGGTAATCGCGGTGGATTTGGTGGAGCTCCTGCTGAGCCAGCTCCAGCGGCTCCGGTGAAGCAGTGCGATGAGAATTGTGGAGATACATGTGACAACTCTAGAATCTATATCTCAAATTTACCACCCGATGTGACTGTTGATGAATTGCAGCAACTTTTTGGAGGCATTGGACAAGTTGGAAGAATAAAGCAGAAGAGGGGTTATAAAGATCAATGGCCTTACAACATTAAAATTTACACTGATGAAAACGGAAAAAACAAGGGTGATGCATGCCTTGCTTACGAAGATCCCTCTGCGGCTCACTCTGCTGGTGGTTTTTACAACGATTATGATTTGAGGGGTTACAAAATCAGTGTTGCAATGGCAGAGAAATCTGCACCAAGGGCTCCTCCAGCAAATAACCATGGGGGCAATAGGGGTGGCTATGGTGGAGATAGGCGCAGAGACAATTCTGGTCCTGATAGGCGGGATCATTATGGCGGGAATCGCTCACGCCCATACTAG
Protein sequence

>Msa0413530

MSGGYGHDAGGGSAPPSYGASGGYGGGGGGGYAGGYGGNESGGGYGTKGSGNGGGRGYGGNDGGGYGGRSGYGGNDGGGYGGRGGGGGGRGGGGGGGYGGRGGGGGFQGGDRGGRGGGGGRGGSGRDGDWRCPNESCGNNNFARRNECNKCGTPCPTSGNDRGGGGGGGGYNRGGSGGGYDNNRGGRSENYGGRTNDYNGGRGNNNDGRSGGSNRGGSYGGNQGREDGGYGQAPPPVAAAQSYGGAGGNYPPTYGGNANYGTDAVPPPTSYTGGPNSYPPSYGGNTGGYGGGDARSGGRAAPQAGYDSGNRGGFGGAPAEPAPAAPVKQCDENCGDTCDNSRIYISNLPPDVTVDELQQLFGGIGQVGRIKQKRGYKDQWPYNIKIYTDENGKNKGDACLAYEDPSAAHSAGGFYNDYDLRGYKISVAMAEKSAPRAPPANNHGGNRGGYGGDRRRDNSGPDRRDHYGGNRSRPY*