Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0769970 | G7JZF1 | 94.752 | 686 | 34 | 2 | 1 | 685 | 1 | 685 | 0.0 | 1315 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0769970 | 0.841458 | 4.693611e-58 | -8.615850e-47 |
| Msa0010490 | Msa0769970 | 0.820872 | 5.451697e-53 | -8.615850e-47 |
| Msa0010500 | Msa0769970 | 0.816092 | 6.606755e-52 | -8.615850e-47 |
| Msa0020390 | Msa0769970 | 0.808701 | 2.720953e-50 | -8.615850e-47 |
| Msa0032470 | Msa0769970 | 0.829937 | 3.892481e-55 | -8.615850e-47 |
| Msa0033850 | Msa0769970 | 0.822646 | 2.119453e-53 | -8.615850e-47 |
| Msa0036540 | Msa0769970 | 0.803020 | 4.255146e-49 | -8.615850e-47 |
| Msa0059950 | Msa0769970 | 0.811758 | 5.966040e-51 | -8.615850e-47 |
| Msa0063520 | Msa0769970 | 0.809759 | 1.614334e-50 | -8.615850e-47 |
| Msa0071250 | Msa0769970 | 0.800663 | 1.296626e-48 | -8.615850e-47 |
| Msa0072420 | Msa0769970 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0073870 | Msa0769970 | 0.804893 | 1.735872e-49 | -8.615850e-47 |
| Msa0081620 | Msa0769970 | 0.815775 | 7.775544e-52 | -8.615850e-47 |
| Msa0090510 | Msa0769970 | 0.826765 | 2.266201e-54 | -8.615850e-47 |
| Msa0095360 | Msa0769970 | 0.815298 | 9.931011e-52 | -8.615850e-47 |
| Msa0095770 | Msa0769970 | 0.811544 | 6.640419e-51 | -8.615850e-47 |
| Msa0108140 | Msa0769970 | 0.803780 | 2.960399e-49 | -8.615850e-47 |
| Msa0111080 | Msa0769970 | 0.804179 | 2.446298e-49 | -8.615850e-47 |
| Msa0604290 | Msa0769970 | 0.829019 | 6.506468e-55 | -8.615850e-47 |
| Msa0631320 | Msa0769970 | 0.801028 | 1.092182e-48 | -8.615850e-47 |
| Msa0665280 | Msa0769970 | 0.810214 | 1.288529e-50 | -8.615850e-47 |
| Msa0689320 | Msa0769970 | 0.845609 | 3.649052e-59 | -8.615850e-47 |
| Msa0701100 | Msa0769970 | 0.809605 | 1.742605e-50 | -8.615850e-47 |
| Msa0703810 | Msa0769970 | 0.811107 | 8.261225e-51 | -8.615850e-47 |
| Msa0719180 | Msa0769970 | 0.829471 | 5.053269e-55 | -8.615850e-47 |
| Msa0732050 | Msa0769970 | 0.813580 | 2.381731e-51 | -8.615850e-47 |
| Msa0741440 | Msa0769970 | 0.818549 | 1.850014e-52 | -8.615850e-47 |
| Msa0746170 | Msa0769970 | 0.828772 | 7.466320e-55 | -8.615850e-47 |
| Msa0746210 | Msa0769970 | 0.837621 | 4.666344e-57 | -8.615850e-47 |
| Msa0747630 | Msa0769970 | 0.812960 | 3.258682e-51 | -8.615850e-47 |
| Msa0769970 | Msa0808090 | 0.881640 | 2.029031e-70 | -8.615850e-47 |
| Msa0769970 | Msa0822500 | 0.817603 | 3.027145e-52 | -8.615850e-47 |
| Msa0769970 | Msa0828590 | 0.817225 | 3.682272e-52 | -8.615850e-47 |
| Msa0769970 | Msa0829220 | 0.801967 | 7.013539e-49 | -8.615850e-47 |
| Msa0769970 | Msa0849040 | 0.860810 | 1.593285e-63 | -8.615850e-47 |
| Msa0769970 | Msa0878220 | 0.814614 | 1.408742e-51 | -8.615850e-47 |
| Msa0769970 | Msa0894710 | 0.801765 | 7.716420e-49 | -8.615850e-47 |
| Msa0769970 | Msa0930740 | 0.819809 | 9.553857e-53 | -8.615850e-47 |
| Msa0769970 | Msa0944020 | 0.833530 | 5.058388e-56 | -8.615850e-47 |
| Msa0769970 | Msa0974950 | 0.827407 | 1.591859e-54 | -8.615850e-47 |
| Msa0769970 | Msa0985180 | 0.823087 | 1.673172e-53 | -8.615850e-47 |
| Msa0769970 | Msa0994370 | 0.818217 | 2.200036e-52 | -8.615850e-47 |
| Msa0769970 | Msa1037520 | 0.815254 | 1.015760e-51 | -8.615850e-47 |
| Msa0769970 | Msa1051850 | 0.800418 | 1.455036e-48 | -8.615850e-47 |
| Msa0769970 | Msa1059470 | 0.850477 | 1.655474e-60 | -8.615850e-47 |
| Msa0769970 | Msa1062040 | 0.826029 | 3.395143e-54 | -8.615850e-47 |
| Msa0769970 | Msa1081790 | -0.812661 | 3.789655e-51 | -8.615850e-47 |
| Msa0769970 | Msa1096070 | 0.833662 | 4.688063e-56 | -8.615850e-47 |
| Msa0769970 | Msa1096950 | 0.800996 | 1.108666e-48 | -8.615850e-47 |
| Msa0769970 | Msa1107200 | 0.808128 | 3.606506e-50 | -8.615850e-47 |
| Msa0769970 | Msa1109780 | -0.806207 | 9.199908e-50 | -8.615850e-47 |
| Msa0769970 | Msa1158640 | -0.855237 | 7.219881e-62 | -8.615850e-47 |
| Msa0769970 | Msa1166090 | -0.809342 | 1.983926e-50 | -8.615850e-47 |
| Msa0769970 | Msa1176380 | 0.834293 | 3.259323e-56 | -8.615850e-47 |
| Msa0769970 | Msa1176720 | 0.817354 | 3.445207e-52 | -8.615850e-47 |
| Msa0769970 | Msa1209440 | 0.804378 | 2.222737e-49 | -8.615850e-47 |
| Msa0769970 | Msa1221330 | 0.817637 | 2.974350e-52 | -8.615850e-47 |
| Msa0769970 | Msa1238680 | 0.803778 | 2.963050e-49 | -8.615850e-47 |
| Msa0769970 | Msa1240970 | 0.804478 | 2.118955e-49 | -8.615850e-47 |
| Msa0769970 | Msa1271130 | 0.812484 | 4.141485e-51 | -8.615850e-47 |
| Msa0769970 | Msa1277780 | 0.815538 | 8.783845e-52 | -8.615850e-47 |
| Msa0769970 | Msa1280340 | 0.809310 | 2.015257e-50 | -8.615850e-47 |
| Msa0769970 | Msa1307160 | 0.802234 | 6.180544e-49 | -8.615850e-47 |
| Msa0769970 | Msa1307180 | 0.821170 | 4.655909e-53 | -8.615850e-47 |
| Msa0769970 | Msa1316360 | 0.826985 | 2.008779e-54 | -8.615850e-47 |
| Msa0769970 | Msa1341060 | 0.801333 | 9.459870e-49 | -8.615850e-47 |
| Msa0769970 | Msa1346840 | 0.813773 | 2.160108e-51 | -8.615850e-47 |
| Msa0769970 | Msa1352890 | 0.809289 | 2.036434e-50 | -8.615850e-47 |
| Msa0769970 | Msa1368710 | 0.822835 | 1.915365e-53 | -8.615850e-47 |
| Msa0769970 | Msa1370590 | 0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0769970 | Msa1374830 | 0.822388 | 2.433519e-53 | -8.615850e-47 |
| Msa0769970 | Msa1382020 | 0.803180 | 3.942809e-49 | -8.615850e-47 |
| Msa0769970 | Msa1384100 | 0.802874 | 4.561483e-49 | -8.615850e-47 |
| Msa0769970 | Msa1396400 | -0.811137 | 8.137622e-51 | -8.615850e-47 |
| Msa0769970 | Msa1401990 | 0.830111 | 3.530528e-55 | -8.615850e-47 |
| Msa0769970 | Msa1407760 | 0.814695 | 1.351713e-51 | -8.615850e-47 |
| Msa0769970 | Msa1419690 | 0.806751 | 7.063524e-50 | -8.615850e-47 |
| Msa0769970 | Msa1437730 | 0.815668 | 8.217165e-52 | -8.615850e-47 |
| Msa0769970 | Msa1457620 | 0.832400 | 9.658473e-56 | -8.615850e-47 |
| Msa0139000 | Msa0769970 | 0.805817 | 1.111506e-49 | -8.615850e-47 |
| Msa0152560 | Msa0769970 | 0.802491 | 5.470875e-49 | -8.615850e-47 |
| Msa0154920 | Msa0769970 | 0.802959 | 4.379359e-49 | -8.615850e-47 |
| Msa0160960 | Msa0769970 | 0.808220 | 3.447406e-50 | -8.615850e-47 |
| Msa0173960 | Msa0769970 | 0.819864 | 9.285386e-53 | -8.615850e-47 |
| Msa0183910 | Msa0769970 | 0.831690 | 1.446953e-55 | -8.615850e-47 |
| Msa0190590 | Msa0769970 | 0.823874 | 1.095131e-53 | -8.615850e-47 |
| Msa0209080 | Msa0769970 | 0.801790 | 7.623474e-49 | -8.615850e-47 |
| Msa0232790 | Msa0769970 | 0.806324 | 8.691776e-50 | -8.615850e-47 |
| Msa0234410 | Msa0769970 | -0.801397 | 9.178721e-49 | -8.615850e-47 |
| Msa0237320 | Msa0769970 | 0.834432 | 3.008003e-56 | -8.615850e-47 |
| Msa0367760 | Msa0769970 | 0.806571 | 7.709925e-50 | -8.615850e-47 |
| Msa0380100 | Msa0769970 | 0.804964 | 1.677346e-49 | -8.615850e-47 |
| Msa0385500 | Msa0769970 | 0.843829 | 1.101667e-58 | -8.615850e-47 |
| Msa0388730 | Msa0769970 | 0.815951 | 7.106914e-52 | -8.615850e-47 |
| Msa0389210 | Msa0769970 | 0.848054 | 7.825015e-60 | -8.615850e-47 |
| Msa0403770 | Msa0769970 | 0.809477 | 1.856125e-50 | -8.615850e-47 |
| Msa0404630 | Msa0769970 | 0.822423 | 2.388053e-53 | -8.615850e-47 |
| Msa0431980 | Msa0769970 | 0.827820 | 1.266839e-54 | -8.615850e-47 |
| Msa0439980 | Msa0769970 | 0.846751 | 1.784466e-59 | -8.615850e-47 |
| Msa0460100 | Msa0769970 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa0462600 | Msa0769970 | 0.806165 | 9.392911e-50 | -8.615850e-47 |
| Msa0257490 | Msa0769970 | 0.831239 | 1.868345e-55 | -8.615850e-47 |
| Msa0259680 | Msa0769970 | 0.840884 | 6.644540e-58 | -8.615850e-47 |
| Msa0272300 | Msa0769970 | 0.827482 | 1.526796e-54 | -8.615850e-47 |
| Msa0274740 | Msa0769970 | 0.833597 | 4.867984e-56 | -8.615850e-47 |
| Msa0296790 | Msa0769970 | 0.816923 | 4.305665e-52 | -8.615850e-47 |
| Msa0315540 | Msa0769970 | 0.825390 | 4.811358e-54 | -8.615850e-47 |
| Msa0341480 | Msa0769970 | 0.848048 | 7.856387e-60 | -8.615850e-47 |
| Msa0485710 | Msa0769970 | 0.840714 | 7.362773e-58 | -8.615850e-47 |
| Msa0507060 | Msa0769970 | 0.800288 | 1.546553e-48 | -8.615850e-47 |
| Msa0520850 | Msa0769970 | 0.828870 | 7.068634e-55 | -8.615850e-47 |
| Msa0527540 | Msa0769970 | 0.809313 | 2.012513e-50 | -8.615850e-47 |
| Msa0527740 | Msa0769970 | 0.824405 | 8.215989e-54 | -8.615850e-47 |
| Msa0534870 | Msa0769970 | 0.821816 | 3.302528e-53 | -8.615850e-47 |
| Msa0542560 | Msa0769970 | 0.852735 | 3.797053e-61 | -8.615850e-47 |
| Msa0544840 | Msa0769970 | 0.823571 | 1.289018e-53 | -8.615850e-47 |
| Msa0549950 | Msa0769970 | 0.801136 | 1.038188e-48 | -8.615850e-47 |
| Msa0566750 | Msa0769970 | 0.800507 | 1.395262e-48 | -8.615850e-47 |
| Msa0574930 | Msa0769970 | 0.812141 | 4.922934e-51 | -8.615850e-47 |
| Msa0588260 | Msa0769970 | 0.800863 | 1.180171e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0769970 | MtrunA17_Chr5g0423001 | 88.103 | 580 | 30 | 2 | 107 | 685 | 1 | 542 | 0.0 | 1017 |
| Msa0769970 | MtrunA17_Chr3g0101951 | 33.865 | 564 | 311 | 12 | 24 | 550 | 17 | 555 | 1.89e-95 | 309 |
| Msa0769970 | MtrunA17_Chr2g0290351 | 32.609 | 598 | 352 | 13 | 16 | 580 | 2 | 581 | 2.77e-94 | 306 |
| Msa0769970 | MtrunA17_Chr5g0423021 | 94.898 | 98 | 4 | 1 | 1 | 98 | 1 | 97 | 2.63e-56 | 186 |
| Msa0769970 | MtrunA17_Chr1g0192961 | 28.834 | 163 | 98 | 3 | 380 | 541 | 8 | 153 | 3.76e-15 | 78.2 |
| Msa0769970 | MtrunA17_Chr1g0192961 | 27.586 | 174 | 102 | 4 | 392 | 564 | 181 | 331 | 9.32e-12 | 67.8 |
| Msa0769970 | MtrunA17_Chr1g0192931 | 30.872 | 149 | 82 | 4 | 388 | 534 | 55 | 184 | 1.29e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0769970 | AT1G68580.2 | 43.222 | 627 | 314 | 14 | 7 | 618 | 1 | 600 | 3.61e-155 | 463 |
| Msa0769970 | AT1G68580.4 | 44.587 | 545 | 267 | 10 | 7 | 542 | 1 | 519 | 7.48e-146 | 435 |
| Msa0769970 | AT1G68580.5 | 44.762 | 525 | 261 | 11 | 105 | 618 | 48 | 554 | 1.91e-136 | 414 |
| Msa0769970 | AT1G68580.3 | 46.169 | 496 | 238 | 11 | 134 | 618 | 27 | 504 | 1.96e-136 | 412 |
| Msa0769970 | AT1G68580.1 | 48.792 | 414 | 190 | 7 | 134 | 542 | 27 | 423 | 5.66e-127 | 383 |
| Msa0769970 | AT5G55600.2 | 32.616 | 604 | 335 | 17 | 19 | 579 | 3 | 577 | 2.70e-87 | 287 |
| Msa0769970 | AT5G55600.1 | 32.616 | 604 | 335 | 17 | 19 | 579 | 3 | 577 | 2.70e-87 | 287 |
| Msa0769970 | AT5G55600.3 | 32.616 | 604 | 335 | 17 | 19 | 579 | 3 | 577 | 2.70e-87 | 287 |
| Msa0769970 | AT4G17330.2 | 31.609 | 174 | 91 | 6 | 378 | 535 | 1564 | 1725 | 1.67e-15 | 81.6 |
| Msa0769970 | AT4G17330.1 | 31.609 | 174 | 91 | 6 | 378 | 535 | 1564 | 1725 | 1.67e-15 | 81.6 |
| Msa0769970 | AT4G17330.3 | 31.609 | 174 | 91 | 6 | 378 | 535 | 1529 | 1690 | 1.96e-15 | 81.3 |
| Msa0769970 | AT1G26540.1 | 31.973 | 147 | 77 | 5 | 395 | 535 | 14 | 143 | 1.37e-11 | 68.2 |
| Msa0769970 | AT1G11420.1 | 34.416 | 154 | 71 | 7 | 395 | 541 | 13 | 143 | 1.78e-11 | 67.8 |
| Msa0769970 | AT1G09320.1 | 33.136 | 169 | 84 | 6 | 376 | 533 | 26 | 176 | 2.16e-11 | 67.4 |
| Msa0769970 | AT1G09320.1 | 30.464 | 151 | 84 | 4 | 385 | 533 | 217 | 348 | 6.13e-11 | 65.9 |
Find 226 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCGTATCGTTAGTTATTA+TGG | 0.164924 | 5_2:+39892855 | Msa0769970:exon |
| CAACATTGGCTTTGACTTTA+GGG | 0.176708 | 5_2:+39896607 | Msa0769970:three_prime_UTR |
| CCAACATTGGCTTTGACTTT+AGG | 0.207548 | 5_2:+39896606 | Msa0769970:three_prime_UTR |
| CAAATCAACTGTAGCATCTA+TGG | 0.214796 | 5_2:+39895925 | Msa0769970:CDS |
| AGAGAGGGAGGGGTTTGAAT+TGG | 0.247560 | 5_2:-39892817 | None:intergenic |
| CTTGTTACTGCTACTGGTTT+TGG | 0.249736 | 5_2:-39895100 | None:intergenic |
| CGCGTACACAAGTTGTTAAT+TGG | 0.250039 | 5_2:+39893127 | Msa0769970:CDS |
| TTCTTCCAGGGATGCGAATA+TGG | 0.258934 | 5_2:+39893767 | Msa0769970:CDS |
| TAACTCAAATGGAGGGTTAT+TGG | 0.262495 | 5_2:+39894860 | Msa0769970:CDS |
| GATTTATAGAGAGGGGTTCT+AGG | 0.265515 | 5_2:-39892794 | None:intergenic |
| ACCTTCAATGTTCCAATATC+AGG | 0.270568 | 5_2:-39893813 | None:intergenic |
| GAATTGGATCTTGCTCTTAT+TGG | 0.272650 | 5_2:+39893024 | Msa0769970:CDS |
| GTACACCGTTGCTTCTTCTT+TGG | 0.272996 | 5_2:-39895003 | None:intergenic |
| GGTTTCGAGATCTGAGAATA+AGG | 0.278971 | 5_2:-39892772 | None:intergenic |
| TGAATACAATATAACAAAAC+TGG | 0.279705 | 5_2:-39896779 | None:intergenic |
| GTTGGAGGGTTCCGTAAAAT+TGG | 0.279793 | 5_2:+39895122 | Msa0769970:CDS |
| TAACATAGGTGCTAGTCTTT+TGG | 0.285295 | 5_2:+39896459 | Msa0769970:three_prime_UTR |
| CTCTGATAGTGGCCGGATCT+TGG | 0.287762 | 5_2:-39895505 | None:intergenic |
| GCCACTTCGATTCCTCTTCC+TGG | 0.294327 | 5_2:-39896077 | None:intergenic |
| CATGGTTATGAACCTGATAT+TGG | 0.299253 | 5_2:+39893801 | Msa0769970:CDS |
| ACCTGTGGTACCTGATGATC+TGG | 0.312493 | 5_2:+39895461 | Msa0769970:CDS |
| CAAACGTCTGGTTGCCTACT+TGG | 0.316619 | 5_2:+39894558 | Msa0769970:CDS |
| TACAACCATCTTGTTGCCTT+TGG | 0.316887 | 5_2:-39894599 | None:intergenic |
| TTTGCTGTCCTCAGATTTGC+AGG | 0.317388 | 5_2:-39895906 | None:intergenic |
| ATTCACACCTAGTTGTATAA+AGG | 0.318867 | 5_2:+39896977 | Msa0769970:three_prime_UTR |
| TCGAGCTTTGTTCCGGTACT+TGG | 0.319281 | 5_2:-39894770 | None:intergenic |
| GAGAGGGAGGGGTTTGAATT+GGG | 0.321559 | 5_2:-39892816 | None:intergenic |
| TTGCTGCACACAAATGGTTC+TGG | 0.335465 | 5_2:-39894802 | None:intergenic |
| GAAGAAGAAAAGTGGTGAAT+TGG | 0.337606 | 5_2:+39893008 | Msa0769970:CDS |
| CTCTTTGATTGTGGCCAACT+TGG | 0.341106 | 5_2:-39895154 | None:intergenic |
| TCAAACTCTAGTGGTAGTTC+AGG | 0.347687 | 5_2:+39894922 | Msa0769970:CDS |
| CTCCAACTTGTTACTGCTAC+TGG | 0.349762 | 5_2:-39895106 | None:intergenic |
| GATGATGCCTGCATAAGTTT+TGG | 0.351627 | 5_2:+39896557 | Msa0769970:three_prime_UTR |
| TCGAAAGAATTCACATGGTT+AGG | 0.353444 | 5_2:+39893971 | Msa0769970:CDS |
| GGCAGGACTGTTTAACTTAG+TGG | 0.355651 | 5_2:+39896578 | Msa0769970:three_prime_UTR |
| GGTGCAATATCACGACATTC+AGG | 0.372888 | 5_2:+39895299 | Msa0769970:CDS |
| GGTAAAACTTATATTATCAT+TGG | 0.379879 | 5_2:-39896676 | None:intergenic |
| ACTTGAGGCATTCTCGAGAT+TGG | 0.383102 | 5_2:+39895801 | Msa0769970:CDS |
| TCTCAAGACAGTGGGATTAG+AGG | 0.387259 | 5_2:+39895228 | Msa0769970:CDS |
| CTGAGTATTGAATGCATAGA+TGG | 0.388591 | 5_2:+39894715 | Msa0769970:CDS |
| TATGGCTTTGAAAGAGAGAT+TGG | 0.390667 | 5_2:+39892873 | Msa0769970:exon |
| AAGGATAAACTTAGAAAGAC+TGG | 0.392515 | 5_2:+39895998 | Msa0769970:CDS |
| GAAACCACTACCAGGCATTT+CGG | 0.394806 | 5_2:+39894020 | Msa0769970:CDS |
| GAGCGTGTCGAGCTTTGTTC+CGG | 0.399625 | 5_2:-39894777 | None:intergenic |
| TTTGTGTGCAGCAAGAAGTT+TGG | 0.403509 | 5_2:+39894811 | Msa0769970:CDS |
| AAAACATCCTTCACAAGATC+TGG | 0.403992 | 5_2:-39896028 | None:intergenic |
| ATTTCAGAAGAGAGAGGGAG+GGG | 0.404611 | 5_2:-39892827 | None:intergenic |
| TTCACACCTAGTTGTATAAA+GGG | 0.404937 | 5_2:+39896978 | Msa0769970:three_prime_UTR |
| GGAAAAGATGCTGTTGAGTT+AGG | 0.405133 | 5_2:+39895036 | Msa0769970:CDS |
| ACTAAAACAAGATAACTAGA+AGG | 0.407365 | 5_2:-39896486 | None:intergenic |
| CGAAAGAATTCACATGGTTA+GGG | 0.407738 | 5_2:+39893972 | Msa0769970:CDS |
| ATCTGATGATGGACCAGAAC+TGG | 0.408102 | 5_2:+39894948 | Msa0769970:CDS |
| AGGCATCATCCTTGCTTCCT+AGG | 0.410713 | 5_2:-39896544 | None:intergenic |
| AATGGAGGGTTATTGGAAAC+AGG | 0.412358 | 5_2:+39894867 | Msa0769970:CDS |
| GAAGAACCCGAGTAAGTATC+AGG | 0.414293 | 5_2:-39895971 | None:intergenic |
| GGCATCATCCTTGCTTCCTA+GGG | 0.416742 | 5_2:-39896543 | None:intergenic |
| GCCCATGCATTGTGTAACTT+TGG | 0.423958 | 5_2:+39896653 | Msa0769970:three_prime_UTR |
| TTGAATTGGGATTTATAGAG+AGG | 0.424740 | 5_2:-39892803 | None:intergenic |
| TTGGTAAAGAGAAGAGTTCT+AGG | 0.425787 | 5_2:+39893043 | Msa0769970:CDS |
| AACTTCTTGCTGCACACAAA+TGG | 0.429204 | 5_2:-39894808 | None:intergenic |
| AAAAGACTAGCACCTATGTT+AGG | 0.430605 | 5_2:-39896457 | None:intergenic |
| GTCTTATCGCAGAAGAAGAA+TGG | 0.435159 | 5_2:-39894981 | None:intergenic |
| TTCATTTGTCTCTTTGATTG+TGG | 0.435179 | 5_2:-39895163 | None:intergenic |
| TTTGATTGTGGCCAACTTGG+TGG | 0.435610 | 5_2:-39895151 | None:intergenic |
| ATTTATAGAGAGGGGTTCTA+GGG | 0.436632 | 5_2:-39892793 | None:intergenic |
| AAATATCATGTTTATTTCCC+AGG | 0.439067 | 5_2:+39895630 | Msa0769970:CDS |
| TGTGGTTCCAGCTTCATTGA+AGG | 0.440047 | 5_2:+39896183 | Msa0769970:CDS |
| TTGGTTACATTGTTGATGCC+TGG | 0.452161 | 5_2:+39895556 | Msa0769970:CDS |
| CAACGGTGTACAAAGGTTGA+TGG | 0.460522 | 5_2:+39895015 | Msa0769970:CDS |
| AGGCATTCTCGAGATTGGAC+TGG | 0.463048 | 5_2:+39895806 | Msa0769970:CDS |
| AAATTCGTGTCGATGGATAA+AGG | 0.465202 | 5_2:+39892961 | Msa0769970:CDS |
| GGCATTCTCGAGATTGGACT+GGG | 0.468500 | 5_2:+39895807 | Msa0769970:CDS |
| ATTCCACGTTTCTCTGATAG+TGG | 0.470082 | 5_2:-39895516 | None:intergenic |
| AGCAGAGGAGAACAAACGTC+TGG | 0.475317 | 5_2:+39894546 | Msa0769970:CDS |
| TGATCAACCTTCAATGAAGC+TGG | 0.476443 | 5_2:-39896190 | None:intergenic |
| GCACGACTGAGGAACTGAAA+AGG | 0.478755 | 5_2:-39896243 | None:intergenic |
| CACGTTTCTCTGATAGTGGC+CGG | 0.483746 | 5_2:-39895512 | None:intergenic |
| ACAAGATGGTTGTAGTTCGC+TGG | 0.484731 | 5_2:+39894608 | Msa0769970:CDS |
| TTACTCGGGTTCTTCTGAAA+AGG | 0.491451 | 5_2:+39895979 | Msa0769970:CDS |
| TCTCGAGATTGGACTGGGAA+TGG | 0.492529 | 5_2:+39895812 | Msa0769970:CDS |
| ATACTCAGACGTTGAAGATA+AGG | 0.493320 | 5_2:-39894700 | None:intergenic |
| TACAGCCATATTCGCATCCC+TGG | 0.493560 | 5_2:-39893772 | None:intergenic |
| TCTTCCGAAATGCCTGGTAG+TGG | 0.493715 | 5_2:-39894024 | None:intergenic |
| GCAATACAAGTCACAACATC+AGG | 0.497975 | 5_2:-39895857 | None:intergenic |
| GAGATTGGACTGGGAATGGA+TGG | 0.498138 | 5_2:+39895816 | Msa0769970:CDS |
| TGGTTAGATTCTATTGTTCA+AGG | 0.498161 | 5_2:+39893147 | Msa0769970:CDS |
| GGCCAAAGTTACACAATGCA+TGG | 0.499526 | 5_2:-39896655 | None:intergenic |
| AATTTCAGAAGAGAGAGGGA+GGG | 0.500264 | 5_2:-39892828 | None:intergenic |
| GCTTCACAGTATTTAGCTGT+AGG | 0.501148 | 5_2:+39895186 | Msa0769970:CDS |
| TGGGAGATGGAATACAATCT+AGG | 0.504917 | 5_2:+39895945 | Msa0769970:CDS |
| GACTGGGAATGGATGGGTAA+AGG | 0.505057 | 5_2:+39895823 | Msa0769970:CDS |
| ACTCGGAGACCCAGATCATC+AGG | 0.505580 | 5_2:-39895471 | None:intergenic |
| GAGGGTTCCGTAAAATTGGT+TGG | 0.505624 | 5_2:+39895126 | Msa0769970:CDS |
| CTCTCTTTCACTAAAACTGT+GGG | 0.505684 | 5_2:-39894665 | None:intergenic |
| CGAGAATGCCTCAAGTTACA+TGG | 0.511581 | 5_2:-39895794 | None:intergenic |
| CACGACTGAGGAACTGAAAA+GGG | 0.511638 | 5_2:-39896242 | None:intergenic |
| TTTCACAGAATTGATGAGGT+TGG | 0.514249 | 5_2:+39894631 | Msa0769970:CDS |
| AGCTGTAGGTTCCAATGTTG+AGG | 0.516100 | 5_2:+39895200 | Msa0769970:CDS |
| GAATTTCAGAAGAGAGAGGG+AGG | 0.516137 | 5_2:-39892829 | None:intergenic |
| CTTAGTGGAATAACCAACAT+TGG | 0.520340 | 5_2:+39896593 | Msa0769970:three_prime_UTR |
| ACCTGATATTGGAACATTGA+AGG | 0.521621 | 5_2:+39893812 | Msa0769970:CDS |
| TAGATGAGAGGACCAAGATC+CGG | 0.525250 | 5_2:+39895493 | Msa0769970:CDS |
| AGTTAAGGTGGAAGTCATCC+AGG | 0.525937 | 5_2:+39896059 | Msa0769970:CDS |
| CATGTGAATTCTTTCGAACA+AGG | 0.525964 | 5_2:-39893965 | None:intergenic |
| GTTTCGAGATCTGAGAATAA+GGG | 0.526390 | 5_2:-39892771 | None:intergenic |
| AATACTGTGTTTCTGCTAAG+TGG | 0.527557 | 5_2:-39896362 | None:intergenic |
| CACAGCACTACGCCAAGTAC+CGG | 0.531875 | 5_2:+39894758 | Msa0769970:CDS |
| GAATACAATATAACAAAACT+GGG | 0.533135 | 5_2:-39896778 | None:intergenic |
| CCTCTCTTTCACTAAAACTG+TGG | 0.537595 | 5_2:-39894666 | None:intergenic |
| CTAGGGCTTCAAATAAAATG+AGG | 0.538796 | 5_2:-39896526 | None:intergenic |
| AACTAGGACGATTCCACCAT+GGG | 0.539841 | 5_2:-39896936 | None:intergenic |
| ATTGCATCAAGTCAGCATTA+CGG | 0.540642 | 5_2:-39896823 | None:intergenic |
| TGGCATGATGGATGGTGGGA+AGG | 0.540826 | 5_2:+39895579 | Msa0769970:CDS |
| ATGCCTGGTGGCATGATGGA+TGG | 0.541595 | 5_2:+39895571 | Msa0769970:CDS |
| GAATGGATGGGTAAAGGTGA+GGG | 0.541939 | 5_2:+39895829 | Msa0769970:CDS |
| AGTCCTGCCAAAACTTATGC+AGG | 0.544229 | 5_2:-39896564 | None:intergenic |
| CCACCATCCATCATGCCACC+AGG | 0.546255 | 5_2:-39895574 | None:intergenic |
| ACTGTAGCATCTATGGGAGA+TGG | 0.548639 | 5_2:+39895932 | Msa0769970:CDS |
| CCCAGATCATCAGGTACCAC+AGG | 0.548955 | 5_2:-39895462 | None:intergenic |
| CGGTACTTGGCGTAGTGCTG+TGG | 0.549279 | 5_2:-39894757 | None:intergenic |
| AAGAAAACAAGGCACAAGAA+AGG | 0.549533 | 5_2:-39896697 | None:intergenic |
| ATTGAATTTCAGAAGAGAGA+GGG | 0.549859 | 5_2:-39892832 | None:intergenic |
| CTGGTTTCACAGAATTGATG+AGG | 0.549883 | 5_2:+39894627 | Msa0769970:CDS |
| TGAATTGGGATTTATAGAGA+GGG | 0.551070 | 5_2:-39892802 | None:intergenic |
| ATTTGAAGCCCTAGGAAGCA+AGG | 0.551675 | 5_2:+39896535 | Msa0769970:three_prime_UTR |
| GGAAGAGAAATTCGTGTCGA+TGG | 0.551967 | 5_2:+39892954 | Msa0769970:CDS |
| TAGGCAGCCTGATACTTACT+CGG | 0.552436 | 5_2:+39895964 | Msa0769970:CDS |
| CAAACTCTAGTGGTAGTTCA+GGG | 0.555530 | 5_2:+39894923 | Msa0769970:CDS |
| ATACTGTGTTTCTGCTAAGT+GGG | 0.556829 | 5_2:-39896361 | None:intergenic |
| GTTTGGTAAGGATGATGTCA+AGG | 0.560830 | 5_2:+39894828 | Msa0769970:CDS |
| AGCCGTTCTTCCGAAATGCC+TGG | 0.562750 | 5_2:-39894030 | None:intergenic |
| CCTGGTGGCATGATGGATGG+TGG | 0.564674 | 5_2:+39895574 | Msa0769970:CDS |
| AGGATAAACTTAGAAAGACT+GGG | 0.565008 | 5_2:+39895999 | Msa0769970:CDS |
| GCCAAAGTTACACAATGCAT+GGG | 0.565270 | 5_2:-39896654 | None:intergenic |
| TGACGAAACCATGAGAAAAG+AGG | 0.568102 | 5_2:-39896423 | None:intergenic |
| ATTGGCTTTGACTTTAGGGA+TGG | 0.568643 | 5_2:+39896611 | Msa0769970:three_prime_UTR |
| GGTGGAAGTCATCCAGGAAG+AGG | 0.569070 | 5_2:+39896065 | Msa0769970:CDS |
| CTTGTTCGAAAGAATTCACA+TGG | 0.569612 | 5_2:+39893966 | Msa0769970:CDS |
| AACCAGTAGCAGTAACAAGT+TGG | 0.570662 | 5_2:+39895104 | Msa0769970:CDS |
| CTGACTTGATGCAATCTCAA+AGG | 0.570695 | 5_2:+39896831 | Msa0769970:three_prime_UTR |
| GATGGGTAAAGGTGAGGGAA+AGG | 0.570981 | 5_2:+39895834 | Msa0769970:CDS |
| CCTAAAGTCAAAGCCAATGT+TGG | 0.571783 | 5_2:-39896606 | None:intergenic |
| CTGGTGGCATGATGGATGGT+GGG | 0.572784 | 5_2:+39895575 | Msa0769970:CDS |
| TACCAGGCATTTCGGAAGAA+CGG | 0.572976 | 5_2:+39894028 | Msa0769970:CDS |
| GGAATGGATGGGTAAAGGTG+AGG | 0.573465 | 5_2:+39895828 | Msa0769970:CDS |
| GCATCAGACTGCAGAAACTT+CGG | 0.573906 | 5_2:-39896148 | None:intergenic |
| ATGCATGGGCTTGCAAACAA+TGG | 0.574458 | 5_2:-39896640 | None:intergenic |
| TTGAGAGAGGACCTCAACAT+TGG | 0.574826 | 5_2:-39895211 | None:intergenic |
| AACAGAGCAATGACATACAT+AGG | 0.575434 | 5_2:+39896116 | Msa0769970:CDS |
| AAATCAACTGTAGCATCTAT+GGG | 0.576521 | 5_2:+39895926 | Msa0769970:CDS |
| GTTGATGCCTGGTGGCATGA+TGG | 0.579936 | 5_2:+39895567 | Msa0769970:CDS |
| ATTGGTTGGAACCACCAAGT+TGG | 0.580240 | 5_2:+39895140 | Msa0769970:CDS |
| ATGAGAAAAGAGGCATCGAA+TGG | 0.580890 | 5_2:-39896413 | None:intergenic |
| ACAGTGGGATTAGAGGATGT+TGG | 0.582052 | 5_2:+39895235 | Msa0769970:CDS |
| TCATGATGACTATAAATACC+AGG | 0.583831 | 5_2:+39896210 | Msa0769970:CDS |
| AAAATGAGGCTCCGATGCCA+CGG | 0.583979 | 5_2:-39896512 | None:intergenic |
| CAGTAGCAGTAACAAGTTGG+AGG | 0.584099 | 5_2:+39895107 | Msa0769970:CDS |
| CTAAAACAAGATAACTAGAA+GGG | 0.585095 | 5_2:-39896485 | None:intergenic |
| CCTGTGGTACCTGATGATCT+GGG | 0.587162 | 5_2:+39895462 | Msa0769970:CDS |
| GAAACGTGGAATATCATTCG+TGG | 0.587500 | 5_2:+39895527 | Msa0769970:CDS |
| TTAGAGCTTCTGTTATCAAG+AGG | 0.589868 | 5_2:+39895259 | Msa0769970:CDS |
| ATATCATTCGTGGGTGATGT+TGG | 0.590093 | 5_2:+39895537 | Msa0769970:CDS |
| TTTGATATAACTCAAATGGA+GGG | 0.591359 | 5_2:+39894853 | Msa0769970:CDS |
| TCTTGGTCCTCTCATCTACT+CGG | 0.592590 | 5_2:-39895488 | None:intergenic |
| AGGTCCTCTCTCAAGACAGT+GGG | 0.596580 | 5_2:+39895220 | Msa0769970:CDS |
| AGTTCAGGGAAATCTGATGA+TGG | 0.598540 | 5_2:+39894937 | Msa0769970:CDS |
| ATGTGTAGATGACTCCATGT+TGG | 0.599392 | 5_2:+39896286 | Msa0769970:exon |
| CTCGTACATGTCTTCCAAGT+AGG | 0.600078 | 5_2:-39894572 | None:intergenic |
| AACTGTGTTCTTCCTAACAT+AGG | 0.600168 | 5_2:+39896445 | Msa0769970:three_prime_UTR |
| CACTAGAGTTTGACTCCACG+TGG | 0.600930 | 5_2:-39894912 | None:intergenic |
| GACATGTACGAGGGTTCCAA+AGG | 0.601793 | 5_2:+39894583 | Msa0769970:CDS |
| TAGGGTTACCATGGACATGT+AGG | 0.604350 | 5_2:+39893990 | Msa0769970:CDS |
| TCACATGGTTAGGGTTACCA+TGG | 0.605975 | 5_2:+39893981 | Msa0769970:CDS |
| AATTGAATTTCAGAAGAGAG+AGG | 0.609828 | 5_2:-39892833 | None:intergenic |
| GAATTGGGATTTATAGAGAG+GGG | 0.611405 | 5_2:-39892801 | None:intergenic |
| TATTTGCACCATGTAACTTG+AGG | 0.611537 | 5_2:+39895786 | Msa0769970:CDS |
| CGTGCCGTCTTTAACCAACA+TGG | 0.612820 | 5_2:+39896261 | Msa0769970:CDS |
| GAAAAGAAGAAACCACTACC+AGG | 0.616824 | 5_2:+39894012 | Msa0769970:CDS |
| ACAAAGTTCCTGCAAATCTG+AGG | 0.617490 | 5_2:+39895898 | Msa0769970:CDS |
| ATGTGAATTCTTTCGAACAA+GGG | 0.618649 | 5_2:-39893964 | None:intergenic |
| AGGCAGCCTGATACTTACTC+GGG | 0.619512 | 5_2:+39895965 | Msa0769970:CDS |
| AAACGTGGAATATCATTCGT+GGG | 0.627151 | 5_2:+39895528 | Msa0769970:CDS |
| TGAAAAGGGAAGGATCTCCC+TGG | 0.627762 | 5_2:-39896228 | None:intergenic |
| ATAACCATGTTGGTTAAAGA+CGG | 0.629339 | 5_2:-39896265 | None:intergenic |
| GGGTTCCAAAGGCAACAAGA+TGG | 0.630417 | 5_2:+39894594 | Msa0769970:CDS |
| CACCTAGTTGTATAAAGGGG+TGG | 0.630837 | 5_2:+39896982 | Msa0769970:three_prime_UTR |
| GAAGAAGCAACGGTGTACAA+AGG | 0.632099 | 5_2:+39895008 | Msa0769970:CDS |
| GCAAGAACAATATTCTCCCA+TGG | 0.632221 | 5_2:+39896920 | Msa0769970:three_prime_UTR |
| GTTACATTGTTGATGCCTGG+TGG | 0.632805 | 5_2:+39895559 | Msa0769970:CDS |
| GTGCAGCAAGAAGTTTGGTA+AGG | 0.632888 | 5_2:+39894816 | Msa0769970:CDS |
| ACTGAGGAACTGAAAAGGGA+AGG | 0.632917 | 5_2:-39896238 | None:intergenic |
| TGGCGTAGTGCTGTGGACTG+AGG | 0.634382 | 5_2:-39894750 | None:intergenic |
| GAGGTCCTCTCTCAAGACAG+TGG | 0.634450 | 5_2:+39895219 | Msa0769970:CDS |
| GGTTAAAGACGGCACGACTG+AGG | 0.637232 | 5_2:-39896254 | None:intergenic |
| CACGTGGAGTCAAACTCTAG+TGG | 0.647874 | 5_2:+39894913 | Msa0769970:CDS |
| TCATCTACACATAACCATGT+TGG | 0.651118 | 5_2:-39896275 | None:intergenic |
| TAATCCCACTGTCTTGAGAG+AGG | 0.651285 | 5_2:-39895224 | None:intergenic |
| CTAGAGTTTGACTCCACGTG+GGG | 0.651840 | 5_2:-39894910 | None:intergenic |
| CATGATGACTATAAATACCA+GGG | 0.653722 | 5_2:+39896211 | Msa0769970:CDS |
| AAACTAGGACGATTCCACCA+TGG | 0.656220 | 5_2:-39896937 | None:intergenic |
| TGGGTCTCCGAGTAGATGAG+AGG | 0.656912 | 5_2:+39895481 | Msa0769970:CDS |
| TAAGACCAAAGAAGAAGCAA+CGG | 0.657790 | 5_2:+39894998 | Msa0769970:CDS |
| TCACGACATTCAGGATGCAG+AGG | 0.660192 | 5_2:+39895308 | Msa0769970:CDS |
| AAAGACATTTCAAGAAAACA+AGG | 0.661133 | 5_2:-39896708 | None:intergenic |
| AGTAGCAGTAACAAGTTGGA+GGG | 0.665623 | 5_2:+39895108 | Msa0769970:CDS |
| CTACTTGGAAGACATGTACG+AGG | 0.672183 | 5_2:+39894573 | Msa0769970:CDS |
| TCACACCTAGTTGTATAAAG+GGG | 0.673024 | 5_2:+39896979 | Msa0769970:three_prime_UTR |
| CTGTGTTTCTGCTAAGTGGG+AGG | 0.673072 | 5_2:-39896358 | None:intergenic |
| GGAAGTTCCAGATCTTGTGA+AGG | 0.675883 | 5_2:+39896021 | Msa0769970:CDS |
| GAGGCACAAAGACAAAGTGA+AGG | 0.676396 | 5_2:+39895278 | Msa0769970:CDS |
| AGATTGGACTGGGAATGGAT+GGG | 0.686741 | 5_2:+39895817 | Msa0769970:CDS |
| GTCCACCCCTTTATACAACT+AGG | 0.692633 | 5_2:-39896984 | None:intergenic |
| TTATCGCAGAAGAAGAATGG+AGG | 0.692820 | 5_2:-39894978 | None:intergenic |
| GATGGATAAAGGTAGAAGAG+AGG | 0.693154 | 5_2:+39892972 | Msa0769970:CDS |
| CGGCCACTATCAGAGAAACG+TGG | 0.693880 | 5_2:+39895513 | Msa0769970:CDS |
| GGATAAACTTAGAAAGACTG+GGG | 0.693898 | 5_2:+39896000 | Msa0769970:CDS |
| AATATGGCTGTAGAGAAACA+TGG | 0.702173 | 5_2:+39893783 | Msa0769970:CDS |
| AGAACAATATTCTCCCATGG+TGG | 0.703024 | 5_2:+39896923 | Msa0769970:three_prime_UTR |
| TCCAGGAAGAGGAATCGAAG+TGG | 0.703286 | 5_2:+39896076 | Msa0769970:CDS |
| ACTAGAGTTTGACTCCACGT+GGG | 0.704632 | 5_2:-39894911 | None:intergenic |
| TACTTGGAAGACATGTACGA+GGG | 0.709651 | 5_2:+39894574 | Msa0769970:CDS |
| GTAGTGCTGTGGACTGAGGA+CGG | 0.713773 | 5_2:-39894746 | None:intergenic |
| AATACAATATAACAAAACTG+GGG | 0.717215 | 5_2:-39896777 | None:intergenic |
| AACGTGTGATAAGATAACAA+AGG | 0.729406 | 5_2:-39896743 | None:intergenic |
| TCTCTTTCACTAAAACTGTG+GGG | 0.748073 | 5_2:-39894664 | None:intergenic |
| GAAGCAAATGTATCCCCACG+TGG | 0.785568 | 5_2:+39894897 | Msa0769970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAGAATCAAAATT+AGG | - | chr5_2:39893196-39893215 | None:intergenic | 10.0% |
| !! | TTTGATACAAAATTAATTTA+GGG | - | chr5_2:39893887-39893906 | None:intergenic | 10.0% |
| !! | ATTTGATACAAAATTAATTT+AGG | - | chr5_2:39893888-39893907 | None:intergenic | 10.0% |
| !!! | TTTATATTTTTCATTAGTAT+TGG | + | chr5_2:39895368-39895387 | Msa0769970:intron | 10.0% |
| !!! | AATTATTGTTTTCATTGATT+AGG | + | chr5_2:39893573-39893592 | Msa0769970:intron | 15.0% |
| !! | AAAATCAAAATAATTCAATG+AGG | - | chr5_2:39893917-39893936 | None:intergenic | 15.0% |
| !!! | TTGAATTATTTTGATTTTTC+AGG | + | chr5_2:39893919-39893938 | Msa0769970:intron | 15.0% |
| !!! | TTTTTTATTGATTTTCTTGA+AGG | + | chr5_2:39895419-39895438 | Msa0769970:intron | 15.0% |
| !! | CAAATTTATAAAAACAAACT+AGG | - | chr5_2:39896955-39896974 | None:intergenic | 15.0% |
| !! | TTATCGAATTAAGATGAAAA+AGG | - | chr5_2:39893309-39893328 | None:intergenic | 20.0% |
| !!! | GATTTTTTGTTTTTGTTTTC+TGG | + | chr5_2:39893674-39893693 | Msa0769970:intron | 20.0% |
| !!! | ATGTGTAAAATATTTTACAC+TGG | - | chr5_2:39894118-39894137 | None:intergenic | 20.0% |
| !!! | CAAAGATTGTTTTTAATTGT+TGG | - | chr5_2:39894232-39894251 | None:intergenic | 20.0% |
| !!! | ATATCTCTTTTTTGTTTCTT+TGG | + | chr5_2:39894273-39894292 | Msa0769970:intron | 20.0% |
| !! | GGTAAAACTTATATTATCAT+TGG | - | chr5_2:39896679-39896698 | None:intergenic | 20.0% |
| !! | AATACAATATAACAAAACTG+GGG | - | chr5_2:39896780-39896799 | None:intergenic | 20.0% |
| !! | GAATACAATATAACAAAACT+GGG | - | chr5_2:39896781-39896800 | None:intergenic | 20.0% |
| !! | TGAATACAATATAACAAAAC+TGG | - | chr5_2:39896782-39896801 | None:intergenic | 20.0% |
| ! | TATCGTATCGTTAGTTATTA+TGG | + | chr5_2:39892855-39892874 | Msa0769970:exon | 25.0% |
| !!! | TATTTTCTGAAGAAGAAAAG+TGG | + | chr5_2:39893000-39893019 | Msa0769970:CDS | 25.0% |
| ! | TCATCTTAATTCGATAATTC+TGG | + | chr5_2:39893312-39893331 | Msa0769970:intron | 25.0% |
| ! | CATCATAATTGGTAAAAAAG+GGG | - | chr5_2:39894090-39894109 | None:intergenic | 25.0% |
| ! | GCATCATAATTGGTAAAAAA+GGG | - | chr5_2:39894091-39894110 | None:intergenic | 25.0% |
| ! | AGCATCATAATTGGTAAAAA+AGG | - | chr5_2:39894092-39894111 | None:intergenic | 25.0% |
| ! | AACTATTAACAGATTGTGAT+TGG | - | chr5_2:39894146-39894165 | None:intergenic | 25.0% |
| ! | ACAATCTGTTAATAGTTGTT+TGG | + | chr5_2:39894149-39894168 | Msa0769970:intron | 25.0% |
| !!! | GCAAAGATTGTTTTTATTGT+TGG | - | chr5_2:39894377-39894396 | None:intergenic | 25.0% |
| !!! | ATATCTCTGTTTTGTTTCTT+TGG | + | chr5_2:39894417-39894436 | Msa0769970:intron | 25.0% |
| !!! | GGATTTTGATATAACTCAAA+TGG | + | chr5_2:39894849-39894868 | Msa0769970:CDS | 25.0% |
| !! | TTTTGATATAACTCAAATGG+AGG | + | chr5_2:39894852-39894871 | Msa0769970:CDS | 25.0% |
| ! | TTTGATATAACTCAAATGGA+GGG | + | chr5_2:39894853-39894872 | Msa0769970:CDS | 25.0% |
| !!! | TATTGATTTTCTTGAAGGAA+TGG | + | chr5_2:39895424-39895443 | Msa0769970:intron | 25.0% |
| ! | AAATATCATGTTTATTTCCC+AGG | + | chr5_2:39895630-39895649 | Msa0769970:CDS | 25.0% |
| ! | TGTTGTCCTTGTAATATATT+AGG | + | chr5_2:39895712-39895731 | Msa0769970:intron | 25.0% |
| !! | ATGTTTTATCATTGCAGTTA+AGG | + | chr5_2:39896044-39896063 | Msa0769970:CDS | 25.0% |
| ! | AGAAAGAAAAAAAACCAACA+TGG | - | chr5_2:39896303-39896322 | None:intergenic | 25.0% |
| !!! | GGTTTTTTTTCTTTCTAGAA+TGG | + | chr5_2:39896307-39896326 | Msa0769970:three_prime_UTR | 25.0% |
| ! | CTAAAACAAGATAACTAGAA+GGG | - | chr5_2:39896488-39896507 | None:intergenic | 25.0% |
| ! | ACTAAAACAAGATAACTAGA+AGG | - | chr5_2:39896489-39896508 | None:intergenic | 25.0% |
| ! | AAAGACATTTCAAGAAAACA+AGG | - | chr5_2:39896711-39896730 | None:intergenic | 25.0% |
| TGAATTGGGATTTATAGAGA+GGG | - | chr5_2:39892805-39892824 | None:intergenic | 30.0% | |
| TTGAATTGGGATTTATAGAG+AGG | - | chr5_2:39892806-39892825 | None:intergenic | 30.0% | |
| ATTGAATTTCAGAAGAGAGA+GGG | - | chr5_2:39892835-39892854 | None:intergenic | 30.0% | |
| AATTGAATTTCAGAAGAGAG+AGG | - | chr5_2:39892836-39892855 | None:intergenic | 30.0% | |
| ATGAAAAAAGATACGTTACG+TGG | + | chr5_2:39892932-39892951 | Msa0769970:CDS | 30.0% | |
| TGAAAAAAGATACGTTACGT+GGG | + | chr5_2:39892933-39892952 | Msa0769970:CDS | 30.0% | |
| CGCGATTTAAGTCTAAAAAA+AGG | - | chr5_2:39893111-39893130 | None:intergenic | 30.0% | |
| TGGTTAGATTCTATTGTTCA+AGG | + | chr5_2:39893147-39893166 | Msa0769970:CDS | 30.0% | |
| ! | GTTGTTTCGAATCTTAATTC+TGG | + | chr5_2:39893260-39893279 | Msa0769970:intron | 30.0% |
| TAGACAAAACCAAATGCAAA+AGG | - | chr5_2:39893385-39893404 | None:intergenic | 30.0% | |
| !!! | TGTCACTGATTATTGGTTTT+TGG | + | chr5_2:39893435-39893454 | Msa0769970:intron | 30.0% |
| CAGTGATATTAATAAGCGAA+GGG | - | chr5_2:39893633-39893652 | None:intergenic | 30.0% | |
| TCAGTGATATTAATAAGCGA+AGG | - | chr5_2:39893634-39893653 | None:intergenic | 30.0% | |
| TGAAAATTTCAGAGGTAAAC+AGG | - | chr5_2:39893742-39893761 | None:intergenic | 30.0% | |
| GAAGAATCTGAAAATTTCAG+AGG | - | chr5_2:39893750-39893769 | None:intergenic | 30.0% | |
| ! | AATTTTCAGATTCTTCTTCC+AGG | + | chr5_2:39893754-39893773 | Msa0769970:intron | 30.0% |
| ! | ATTTTCAGATTCTTCTTCCA+GGG | + | chr5_2:39893755-39893774 | Msa0769970:intron | 30.0% |
| ATGTGAATTCTTTCGAACAA+GGG | - | chr5_2:39893967-39893986 | None:intergenic | 30.0% | |
| TTATTGTTGGTCGATTACAA+CGG | - | chr5_2:39894364-39894383 | None:intergenic | 30.0% | |
| GTCAGATTACAATACATTTG+AGG | - | chr5_2:39894456-39894475 | None:intergenic | 30.0% | |
| !!! | TTTTGTGTTTGTTTTAGCAG+AGG | + | chr5_2:39894531-39894550 | Msa0769970:CDS | 30.0% |
| TTCATTTGTCTCTTTGATTG+TGG | - | chr5_2:39895166-39895185 | None:intergenic | 30.0% | |
| GTACAGAATATAAGAACAGA+AGG | - | chr5_2:39895661-39895680 | None:intergenic | 30.0% | |
| ACAGAGCATACACAAAATTA+TGG | - | chr5_2:39895683-39895702 | None:intergenic | 30.0% | |
| AAGACGCCTAATATATTACA+AGG | - | chr5_2:39895721-39895740 | None:intergenic | 30.0% | |
| AAATCAACTGTAGCATCTAT+GGG | + | chr5_2:39895926-39895945 | Msa0769970:CDS | 30.0% | |
| AAGGATAAACTTAGAAAGAC+TGG | + | chr5_2:39895998-39896017 | Msa0769970:CDS | 30.0% | |
| AGGATAAACTTAGAAAGACT+GGG | + | chr5_2:39895999-39896018 | Msa0769970:CDS | 30.0% | |
| ! | TTTTATCATTGCAGTTAAGG+TGG | + | chr5_2:39896047-39896066 | Msa0769970:CDS | 30.0% |
| TCATGATGACTATAAATACC+AGG | + | chr5_2:39896210-39896229 | Msa0769970:CDS | 30.0% | |
| CATGATGACTATAAATACCA+GGG | + | chr5_2:39896211-39896230 | Msa0769970:CDS | 30.0% | |
| ! | ATAACCATGTTGGTTAAAGA+CGG | - | chr5_2:39896268-39896287 | None:intergenic | 30.0% |
| !!! | TAGAATGGTGTCTACTTTTT+AGG | + | chr5_2:39896322-39896341 | Msa0769970:three_prime_UTR | 30.0% |
| !!! | TATCTTGTTTTAGTATTCCG+TGG | + | chr5_2:39896495-39896514 | Msa0769970:three_prime_UTR | 30.0% |
| AACGTGTGATAAGATAACAA+AGG | - | chr5_2:39896746-39896765 | None:intergenic | 30.0% | |
| ATTCACACCTAGTTGTATAA+AGG | + | chr5_2:39896977-39896996 | Msa0769970:three_prime_UTR | 30.0% | |
| TTCACACCTAGTTGTATAAA+GGG | + | chr5_2:39896978-39896997 | Msa0769970:three_prime_UTR | 30.0% | |
| GTTTCGAGATCTGAGAATAA+GGG | - | chr5_2:39892774-39892793 | None:intergenic | 35.0% | |
| ATTTATAGAGAGGGGTTCTA+GGG | - | chr5_2:39892796-39892815 | None:intergenic | 35.0% | |
| GAATTGGGATTTATAGAGAG+GGG | - | chr5_2:39892804-39892823 | None:intergenic | 35.0% | |
| !! | TATGGCTTTGAAAGAGAGAT+TGG | + | chr5_2:39892873-39892892 | Msa0769970:exon | 35.0% |
| ! | AAATTCGTGTCGATGGATAA+AGG | + | chr5_2:39892961-39892980 | Msa0769970:CDS | 35.0% |
| GAAGAAGAAAAGTGGTGAAT+TGG | + | chr5_2:39893008-39893027 | Msa0769970:CDS | 35.0% | |
| GAATTGGATCTTGCTCTTAT+TGG | + | chr5_2:39893024-39893043 | Msa0769970:CDS | 35.0% | |
| TTGGTAAAGAGAAGAGTTCT+AGG | + | chr5_2:39893043-39893062 | Msa0769970:CDS | 35.0% | |
| ! | CGATAATTCTGGTCTTTCAT+TGG | + | chr5_2:39893323-39893342 | Msa0769970:intron | 35.0% |
| ! | TAGTCTGTTCCTTTTGCATT+TGG | + | chr5_2:39893373-39893392 | Msa0769970:intron | 35.0% |
| !! | GGTTTTGTGTCACTGATTAT+TGG | + | chr5_2:39893428-39893447 | Msa0769970:intron | 35.0% |
| !!! | TGGTTTTGTGTCACGATTTT+TGG | + | chr5_2:39893455-39893474 | Msa0769970:intron | 35.0% |
| !!! | GTGTCACGATTTTTGGTTTT+TGG | + | chr5_2:39893462-39893481 | Msa0769970:intron | 35.0% |
| TTAATAAGCGAAGGGATTCA+AGG | - | chr5_2:39893625-39893644 | None:intergenic | 35.0% | |
| AATATGGCTGTAGAGAAACA+TGG | + | chr5_2:39893783-39893802 | Msa0769970:CDS | 35.0% | |
| CATGGTTATGAACCTGATAT+TGG | + | chr5_2:39893801-39893820 | Msa0769970:CDS | 35.0% | |
| ACCTGATATTGGAACATTGA+AGG | + | chr5_2:39893812-39893831 | Msa0769970:CDS | 35.0% | |
| ACCTTCAATGTTCCAATATC+AGG | - | chr5_2:39893816-39893835 | None:intergenic | 35.0% | |
| CATGTGAATTCTTTCGAACA+AGG | - | chr5_2:39893968-39893987 | None:intergenic | 35.0% | |
| CTTGTTCGAAAGAATTCACA+TGG | + | chr5_2:39893966-39893985 | Msa0769970:CDS | 35.0% | |
| TCGAAAGAATTCACATGGTT+AGG | + | chr5_2:39893971-39893990 | Msa0769970:CDS | 35.0% | |
| CGAAAGAATTCACATGGTTA+GGG | + | chr5_2:39893972-39893991 | Msa0769970:CDS | 35.0% | |
| TTGGCTATTTGTCAGTTGTA+TGG | + | chr5_2:39894292-39894311 | Msa0769970:intron | 35.0% | |
| !! | GCTTTCGCAAATTGATTTTC+AGG | + | chr5_2:39894501-39894520 | Msa0769970:intron | 35.0% |
| TTTCACAGAATTGATGAGGT+TGG | + | chr5_2:39894631-39894650 | Msa0769970:CDS | 35.0% | |
| TCTCTTTCACTAAAACTGTG+GGG | - | chr5_2:39894667-39894686 | None:intergenic | 35.0% | |
| CTCTCTTTCACTAAAACTGT+GGG | - | chr5_2:39894668-39894687 | None:intergenic | 35.0% | |
| ATACTCAGACGTTGAAGATA+AGG | - | chr5_2:39894703-39894722 | None:intergenic | 35.0% | |
| !! | CTGAGTATTGAATGCATAGA+TGG | + | chr5_2:39894715-39894734 | Msa0769970:CDS | 35.0% |
| TAACTCAAATGGAGGGTTAT+TGG | + | chr5_2:39894860-39894879 | Msa0769970:CDS | 35.0% | |
| TAAGACCAAAGAAGAAGCAA+CGG | + | chr5_2:39894998-39895017 | Msa0769970:CDS | 35.0% | |
| TTAGAGCTTCTGTTATCAAG+AGG | + | chr5_2:39895259-39895278 | Msa0769970:CDS | 35.0% | |
| AAACGTGGAATATCATTCGT+GGG | + | chr5_2:39895528-39895547 | Msa0769970:CDS | 35.0% | |
| TCTTGAAGTTAATGCTTTGC+AGG | + | chr5_2:39895746-39895765 | Msa0769970:intron | 35.0% | |
| CTTGAAGTTAATGCTTTGCA+GGG | + | chr5_2:39895747-39895766 | Msa0769970:intron | 35.0% | |
| TTGAAGTTAATGCTTTGCAG+GGG | + | chr5_2:39895748-39895767 | Msa0769970:intron | 35.0% | |
| TATTTGCACCATGTAACTTG+AGG | + | chr5_2:39895786-39895805 | Msa0769970:CDS | 35.0% | |
| CAAATCAACTGTAGCATCTA+TGG | + | chr5_2:39895925-39895944 | Msa0769970:CDS | 35.0% | |
| GGATAAACTTAGAAAGACTG+GGG | + | chr5_2:39896000-39896019 | Msa0769970:CDS | 35.0% | |
| AAAACATCCTTCACAAGATC+TGG | - | chr5_2:39896031-39896050 | None:intergenic | 35.0% | |
| AACAGAGCAATGACATACAT+AGG | + | chr5_2:39896116-39896135 | Msa0769970:CDS | 35.0% | |
| !! | TGATGCTACTGATAGTTTTG+TGG | + | chr5_2:39896165-39896184 | Msa0769970:CDS | 35.0% |
| TCATCTACACATAACCATGT+TGG | - | chr5_2:39896278-39896297 | None:intergenic | 35.0% | |
| ! | ATACTGTGTTTCTGCTAAGT+GGG | - | chr5_2:39896364-39896383 | None:intergenic | 35.0% |
| ! | AATACTGTGTTTCTGCTAAG+TGG | - | chr5_2:39896365-39896384 | None:intergenic | 35.0% |
| AACTGTGTTCTTCCTAACAT+AGG | + | chr5_2:39896445-39896464 | Msa0769970:three_prime_UTR | 35.0% | |
| AAAAGACTAGCACCTATGTT+AGG | - | chr5_2:39896460-39896479 | None:intergenic | 35.0% | |
| !!! | TAACATAGGTGCTAGTCTTT+TGG | + | chr5_2:39896459-39896478 | Msa0769970:three_prime_UTR | 35.0% |
| CTAGGGCTTCAAATAAAATG+AGG | - | chr5_2:39896529-39896548 | None:intergenic | 35.0% | |
| !! | CTCATTTTATTTGAAGCCCT+AGG | + | chr5_2:39896527-39896546 | Msa0769970:three_prime_UTR | 35.0% |
| CTTAGTGGAATAACCAACAT+TGG | + | chr5_2:39896593-39896612 | Msa0769970:three_prime_UTR | 35.0% | |
| !! | CAACATTGGCTTTGACTTTA+GGG | + | chr5_2:39896607-39896626 | Msa0769970:three_prime_UTR | 35.0% |
| AAGAAAACAAGGCACAAGAA+AGG | - | chr5_2:39896700-39896719 | None:intergenic | 35.0% | |
| ATTGCATCAAGTCAGCATTA+CGG | - | chr5_2:39896826-39896845 | None:intergenic | 35.0% | |
| TCACACCTAGTTGTATAAAG+GGG | + | chr5_2:39896979-39896998 | Msa0769970:three_prime_UTR | 35.0% | |
| GGTTTCGAGATCTGAGAATA+AGG | - | chr5_2:39892775-39892794 | None:intergenic | 40.0% | |
| GATTTATAGAGAGGGGTTCT+AGG | - | chr5_2:39892797-39892816 | None:intergenic | 40.0% | |
| AATTTCAGAAGAGAGAGGGA+GGG | - | chr5_2:39892831-39892850 | None:intergenic | 40.0% | |
| GATGGATAAAGGTAGAAGAG+AGG | + | chr5_2:39892972-39892991 | Msa0769970:CDS | 40.0% | |
| CGCGTACACAAGTTGTTAAT+TGG | + | chr5_2:39893127-39893146 | Msa0769970:CDS | 40.0% | |
| ! | CTTCTTTTCCTACATGTCCA+TGG | - | chr5_2:39894001-39894020 | None:intergenic | 40.0% |
| GAAAAGAAGAAACCACTACC+AGG | + | chr5_2:39894012-39894031 | Msa0769970:CDS | 40.0% | |
| ! | CACTGGCAAAGCATCATAAT+TGG | - | chr5_2:39894101-39894120 | None:intergenic | 40.0% |
| AATCAATTTGCGAAAGCAGC+AGG | - | chr5_2:39894498-39894517 | None:intergenic | 40.0% | |
| TACTTGGAAGACATGTACGA+GGG | + | chr5_2:39894574-39894593 | Msa0769970:CDS | 40.0% | |
| TACAACCATCTTGTTGCCTT+TGG | - | chr5_2:39894602-39894621 | None:intergenic | 40.0% | |
| CTGGTTTCACAGAATTGATG+AGG | + | chr5_2:39894627-39894646 | Msa0769970:CDS | 40.0% | |
| CCTCTCTTTCACTAAAACTG+TGG | - | chr5_2:39894669-39894688 | None:intergenic | 40.0% | |
| !! | CCACAGTTTTAGTGAAAGAG+AGG | + | chr5_2:39894666-39894685 | Msa0769970:CDS | 40.0% |
| AACTTCTTGCTGCACACAAA+TGG | - | chr5_2:39894811-39894830 | None:intergenic | 40.0% | |
| TTTGTGTGCAGCAAGAAGTT+TGG | + | chr5_2:39894811-39894830 | Msa0769970:CDS | 40.0% | |
| GTTTGGTAAGGATGATGTCA+AGG | + | chr5_2:39894828-39894847 | Msa0769970:CDS | 40.0% | |
| AATGGAGGGTTATTGGAAAC+AGG | + | chr5_2:39894867-39894886 | Msa0769970:CDS | 40.0% | |
| TCAAACTCTAGTGGTAGTTC+AGG | + | chr5_2:39894922-39894941 | Msa0769970:CDS | 40.0% | |
| CAAACTCTAGTGGTAGTTCA+GGG | + | chr5_2:39894923-39894942 | Msa0769970:CDS | 40.0% | |
| AGTTCAGGGAAATCTGATGA+TGG | + | chr5_2:39894937-39894956 | Msa0769970:CDS | 40.0% | |
| TTATCGCAGAAGAAGAATGG+AGG | - | chr5_2:39894981-39895000 | None:intergenic | 40.0% | |
| GTCTTATCGCAGAAGAAGAA+TGG | - | chr5_2:39894984-39895003 | None:intergenic | 40.0% | |
| GGAAAAGATGCTGTTGAGTT+AGG | + | chr5_2:39895036-39895055 | Msa0769970:CDS | 40.0% | |
| !!! | CTTGTTACTGCTACTGGTTT+TGG | - | chr5_2:39895103-39895122 | None:intergenic | 40.0% |
| AACCAGTAGCAGTAACAAGT+TGG | + | chr5_2:39895104-39895123 | Msa0769970:CDS | 40.0% | |
| ! | AGTAGCAGTAACAAGTTGGA+GGG | + | chr5_2:39895108-39895127 | Msa0769970:CDS | 40.0% |
| ! | GGTGGTTCCAACCAATTTTA+CGG | - | chr5_2:39895136-39895155 | None:intergenic | 40.0% |
| GCTTCACAGTATTTAGCTGT+AGG | + | chr5_2:39895186-39895205 | Msa0769970:CDS | 40.0% | |
| !!! | GATTTTAGCTTCTAGACCTG+TGG | + | chr5_2:39895446-39895465 | Msa0769970:CDS | 40.0% |
| ATTCCACGTTTCTCTGATAG+TGG | - | chr5_2:39895519-39895538 | None:intergenic | 40.0% | |
| GAAACGTGGAATATCATTCG+TGG | + | chr5_2:39895527-39895546 | Msa0769970:CDS | 40.0% | |
| ATATCATTCGTGGGTGATGT+TGG | + | chr5_2:39895537-39895556 | Msa0769970:CDS | 40.0% | |
| TTGGTTACATTGTTGATGCC+TGG | + | chr5_2:39895556-39895575 | Msa0769970:CDS | 40.0% | |
| AAGAACAGAAGGTCATACCT+GGG | - | chr5_2:39895650-39895669 | None:intergenic | 40.0% | |
| TAAGAACAGAAGGTCATACC+TGG | - | chr5_2:39895651-39895670 | None:intergenic | 40.0% | |
| GCAATACAAGTCACAACATC+AGG | - | chr5_2:39895860-39895879 | None:intergenic | 40.0% | |
| ACAAAGTTCCTGCAAATCTG+AGG | + | chr5_2:39895898-39895917 | Msa0769970:CDS | 40.0% | |
| TGGGAGATGGAATACAATCT+AGG | + | chr5_2:39895945-39895964 | Msa0769970:CDS | 40.0% | |
| ! | TTACTCGGGTTCTTCTGAAA+AGG | + | chr5_2:39895979-39895998 | Msa0769970:CDS | 40.0% |
| TGATCAACCTTCAATGAAGC+TGG | - | chr5_2:39896193-39896212 | None:intergenic | 40.0% | |
| ATGTGTAGATGACTCCATGT+TGG | + | chr5_2:39896286-39896305 | Msa0769970:exon | 40.0% | |
| !! | ATGAGAAAAGAGGCATCGAA+TGG | - | chr5_2:39896416-39896435 | None:intergenic | 40.0% |
| ! | ATTCGATGCCTCTTTTCTCA+TGG | + | chr5_2:39896415-39896434 | Msa0769970:three_prime_UTR | 40.0% |
| TGACGAAACCATGAGAAAAG+AGG | - | chr5_2:39896426-39896445 | None:intergenic | 40.0% | |
| !! | GTTTTAGTATTCCGTGGCAT+CGG | + | chr5_2:39896501-39896520 | Msa0769970:three_prime_UTR | 40.0% |
| ! | GATGATGCCTGCATAAGTTT+TGG | + | chr5_2:39896557-39896576 | Msa0769970:three_prime_UTR | 40.0% |
| CCTAAAGTCAAAGCCAATGT+TGG | - | chr5_2:39896609-39896628 | None:intergenic | 40.0% | |
| !! | CCAACATTGGCTTTGACTTT+AGG | + | chr5_2:39896606-39896625 | Msa0769970:three_prime_UTR | 40.0% |
| !! | ATTGGCTTTGACTTTAGGGA+TGG | + | chr5_2:39896611-39896630 | Msa0769970:three_prime_UTR | 40.0% |
| GCCAAAGTTACACAATGCAT+GGG | - | chr5_2:39896657-39896676 | None:intergenic | 40.0% | |
| ! | CTGACTTGATGCAATCTCAA+AGG | + | chr5_2:39896831-39896850 | Msa0769970:three_prime_UTR | 40.0% |
| GCAAGAACAATATTCTCCCA+TGG | + | chr5_2:39896920-39896939 | Msa0769970:three_prime_UTR | 40.0% | |
| AGAACAATATTCTCCCATGG+TGG | + | chr5_2:39896923-39896942 | Msa0769970:three_prime_UTR | 40.0% | |
| ATTTCAGAAGAGAGAGGGAG+GGG | - | chr5_2:39892830-39892849 | None:intergenic | 45.0% | |
| GAATTTCAGAAGAGAGAGGG+AGG | - | chr5_2:39892832-39892851 | None:intergenic | 45.0% | |
| GGAAGAGAAATTCGTGTCGA+TGG | + | chr5_2:39892954-39892973 | Msa0769970:CDS | 45.0% | |
| TTCTTCCAGGGATGCGAATA+TGG | + | chr5_2:39893767-39893786 | Msa0769970:CDS | 45.0% | |
| TCACATGGTTAGGGTTACCA+TGG | + | chr5_2:39893981-39894000 | Msa0769970:CDS | 45.0% | |
| TAGGGTTACCATGGACATGT+AGG | + | chr5_2:39893990-39894009 | Msa0769970:CDS | 45.0% | |
| GAAACCACTACCAGGCATTT+CGG | + | chr5_2:39894020-39894039 | Msa0769970:CDS | 45.0% | |
| TACCAGGCATTTCGGAAGAA+CGG | + | chr5_2:39894028-39894047 | Msa0769970:CDS | 45.0% | |
| CTCGTACATGTCTTCCAAGT+AGG | - | chr5_2:39894575-39894594 | None:intergenic | 45.0% | |
| CTACTTGGAAGACATGTACG+AGG | + | chr5_2:39894573-39894592 | Msa0769970:CDS | 45.0% | |
| ACAAGATGGTTGTAGTTCGC+TGG | + | chr5_2:39894608-39894627 | Msa0769970:CDS | 45.0% | |
| TTGCTGCACACAAATGGTTC+TGG | - | chr5_2:39894805-39894824 | None:intergenic | 45.0% | |
| GTGCAGCAAGAAGTTTGGTA+AGG | + | chr5_2:39894816-39894835 | Msa0769970:CDS | 45.0% | |
| ACTAGAGTTTGACTCCACGT+GGG | - | chr5_2:39894914-39894933 | None:intergenic | 45.0% | |
| !! | ATCTGATGATGGACCAGAAC+TGG | + | chr5_2:39894948-39894967 | Msa0769970:CDS | 45.0% |
| ! | TGGAGGTTTTCTTCCAGTTC+TGG | - | chr5_2:39894964-39894983 | None:intergenic | 45.0% |
| GTACACCGTTGCTTCTTCTT+TGG | - | chr5_2:39895006-39895025 | None:intergenic | 45.0% | |
| GAAGAAGCAACGGTGTACAA+AGG | + | chr5_2:39895008-39895027 | Msa0769970:CDS | 45.0% | |
| CAACGGTGTACAAAGGTTGA+TGG | + | chr5_2:39895015-39895034 | Msa0769970:CDS | 45.0% | |
| !! | CTCCAACTTGTTACTGCTAC+TGG | - | chr5_2:39895109-39895128 | None:intergenic | 45.0% |
| ! | CAGTAGCAGTAACAAGTTGG+AGG | + | chr5_2:39895107-39895126 | Msa0769970:CDS | 45.0% |
| GTTGGAGGGTTCCGTAAAAT+TGG | + | chr5_2:39895122-39895141 | Msa0769970:CDS | 45.0% | |
| GAGGGTTCCGTAAAATTGGT+TGG | + | chr5_2:39895126-39895145 | Msa0769970:CDS | 45.0% | |
| ATTGGTTGGAACCACCAAGT+TGG | + | chr5_2:39895140-39895159 | Msa0769970:CDS | 45.0% | |
| TTTGATTGTGGCCAACTTGG+TGG | - | chr5_2:39895154-39895173 | None:intergenic | 45.0% | |
| CTCTTTGATTGTGGCCAACT+TGG | - | chr5_2:39895157-39895176 | None:intergenic | 45.0% | |
| AGCTGTAGGTTCCAATGTTG+AGG | + | chr5_2:39895200-39895219 | Msa0769970:CDS | 45.0% | |
| TTGAGAGAGGACCTCAACAT+TGG | - | chr5_2:39895214-39895233 | None:intergenic | 45.0% | |
| TAATCCCACTGTCTTGAGAG+AGG | - | chr5_2:39895227-39895246 | None:intergenic | 45.0% | |
| TCTCAAGACAGTGGGATTAG+AGG | + | chr5_2:39895228-39895247 | Msa0769970:CDS | 45.0% | |
| ACAGTGGGATTAGAGGATGT+TGG | + | chr5_2:39895235-39895254 | Msa0769970:CDS | 45.0% | |
| GAGGCACAAAGACAAAGTGA+AGG | + | chr5_2:39895278-39895297 | Msa0769970:CDS | 45.0% | |
| GGTGCAATATCACGACATTC+AGG | + | chr5_2:39895299-39895318 | Msa0769970:CDS | 45.0% | |
| GGATGAAGCTAAAAAGCTCG+AGG | + | chr5_2:39895329-39895348 | Msa0769970:CDS | 45.0% | |
| TCTTGGTCCTCTCATCTACT+CGG | - | chr5_2:39895491-39895510 | None:intergenic | 45.0% | |
| TAGATGAGAGGACCAAGATC+CGG | + | chr5_2:39895493-39895512 | Msa0769970:CDS | 45.0% | |
| GTTACATTGTTGATGCCTGG+TGG | + | chr5_2:39895559-39895578 | Msa0769970:CDS | 45.0% | |
| CGAGAATGCCTCAAGTTACA+TGG | - | chr5_2:39895797-39895816 | None:intergenic | 45.0% | |
| ! | ACTTGAGGCATTCTCGAGAT+TGG | + | chr5_2:39895801-39895820 | Msa0769970:CDS | 45.0% |
| ! | AGATTGGACTGGGAATGGAT+GGG | + | chr5_2:39895817-39895836 | Msa0769970:CDS | 45.0% |
| GAATGGATGGGTAAAGGTGA+GGG | + | chr5_2:39895829-39895848 | Msa0769970:CDS | 45.0% | |
| ! | TTTGCTGTCCTCAGATTTGC+AGG | - | chr5_2:39895909-39895928 | None:intergenic | 45.0% |
| ACTGTAGCATCTATGGGAGA+TGG | + | chr5_2:39895932-39895951 | Msa0769970:CDS | 45.0% | |
| TAGGCAGCCTGATACTTACT+CGG | + | chr5_2:39895964-39895983 | Msa0769970:CDS | 45.0% | |
| GAAGAACCCGAGTAAGTATC+AGG | - | chr5_2:39895974-39895993 | None:intergenic | 45.0% | |
| GGAAGTTCCAGATCTTGTGA+AGG | + | chr5_2:39896021-39896040 | Msa0769970:CDS | 45.0% | |
| AGTTAAGGTGGAAGTCATCC+AGG | + | chr5_2:39896059-39896078 | Msa0769970:CDS | 45.0% | |
| GCATCAGACTGCAGAAACTT+CGG | - | chr5_2:39896151-39896170 | None:intergenic | 45.0% | |
| TGTGGTTCCAGCTTCATTGA+AGG | + | chr5_2:39896183-39896202 | Msa0769970:CDS | 45.0% | |
| ACTGAGGAACTGAAAAGGGA+AGG | - | chr5_2:39896241-39896260 | None:intergenic | 45.0% | |
| CACGACTGAGGAACTGAAAA+GGG | - | chr5_2:39896245-39896264 | None:intergenic | 45.0% | |
| ! | ATTTGAAGCCCTAGGAAGCA+AGG | + | chr5_2:39896535-39896554 | Msa0769970:three_prime_UTR | 45.0% |
| !! | ATGCCTGCATAAGTTTTGGC+AGG | + | chr5_2:39896561-39896580 | Msa0769970:three_prime_UTR | 45.0% |
| AGTCCTGCCAAAACTTATGC+AGG | - | chr5_2:39896567-39896586 | None:intergenic | 45.0% | |
| ! | GGCAGGACTGTTTAACTTAG+TGG | + | chr5_2:39896578-39896597 | Msa0769970:three_prime_UTR | 45.0% |
| ATGCATGGGCTTGCAAACAA+TGG | - | chr5_2:39896643-39896662 | None:intergenic | 45.0% | |
| GCCCATGCATTGTGTAACTT+TGG | + | chr5_2:39896653-39896672 | Msa0769970:three_prime_UTR | 45.0% | |
| GGCCAAAGTTACACAATGCA+TGG | - | chr5_2:39896658-39896677 | None:intergenic | 45.0% | |
| AACTAGGACGATTCCACCAT+GGG | - | chr5_2:39896939-39896958 | None:intergenic | 45.0% | |
| AAACTAGGACGATTCCACCA+TGG | - | chr5_2:39896940-39896959 | None:intergenic | 45.0% | |
| CACCTAGTTGTATAAAGGGG+TGG | + | chr5_2:39896982-39897001 | Msa0769970:three_prime_UTR | 45.0% | |
| GTCCACCCCTTTATACAACT+AGG | - | chr5_2:39896987-39897006 | None:intergenic | 45.0% | |
| GAGAGGGAGGGGTTTGAATT+GGG | - | chr5_2:39892819-39892838 | None:intergenic | 50.0% | |
| AGAGAGGGAGGGGTTTGAAT+TGG | - | chr5_2:39892820-39892839 | None:intergenic | 50.0% | |
| TTGTCTAGATCTCTCGCGTG+TGG | + | chr5_2:39893398-39893417 | Msa0769970:intron | 50.0% | |
| TGTCTAGATCTCTCGCGTGT+GGG | + | chr5_2:39893399-39893418 | Msa0769970:intron | 50.0% | |
| ! | TCTCTCGCGTGTGGGATTTT+TGG | + | chr5_2:39893407-39893426 | Msa0769970:intron | 50.0% |
| TACAGCCATATTCGCATCCC+TGG | - | chr5_2:39893775-39893794 | None:intergenic | 50.0% | |
| TCTTCCGAAATGCCTGGTAG+TGG | - | chr5_2:39894027-39894046 | None:intergenic | 50.0% | |
| AGCAGAGGAGAACAAACGTC+TGG | + | chr5_2:39894546-39894565 | Msa0769970:CDS | 50.0% | |
| CAAACGTCTGGTTGCCTACT+TGG | + | chr5_2:39894558-39894577 | Msa0769970:CDS | 50.0% | |
| GACATGTACGAGGGTTCCAA+AGG | + | chr5_2:39894583-39894602 | Msa0769970:CDS | 50.0% | |
| GGGTTCCAAAGGCAACAAGA+TGG | + | chr5_2:39894594-39894613 | Msa0769970:CDS | 50.0% | |
| !! | TCGAGCTTTGTTCCGGTACT+TGG | - | chr5_2:39894773-39894792 | None:intergenic | 50.0% |
| GAAGCAAATGTATCCCCACG+TGG | + | chr5_2:39894897-39894916 | Msa0769970:CDS | 50.0% | |
| CTAGAGTTTGACTCCACGTG+GGG | - | chr5_2:39894913-39894932 | None:intergenic | 50.0% | |
| CACTAGAGTTTGACTCCACG+TGG | - | chr5_2:39894915-39894934 | None:intergenic | 50.0% | |
| CACGTGGAGTCAAACTCTAG+TGG | + | chr5_2:39894913-39894932 | Msa0769970:CDS | 50.0% | |
| AGGTCCTCTCTCAAGACAGT+GGG | + | chr5_2:39895220-39895239 | Msa0769970:CDS | 50.0% | |
| TCACGACATTCAGGATGCAG+AGG | + | chr5_2:39895308-39895327 | Msa0769970:CDS | 50.0% | |
| ACCTGTGGTACCTGATGATC+TGG | + | chr5_2:39895461-39895480 | Msa0769970:CDS | 50.0% | |
| CCTGTGGTACCTGATGATCT+GGG | + | chr5_2:39895462-39895481 | Msa0769970:CDS | 50.0% | |
| !! | CACGTTTCTCTGATAGTGGC+CGG | - | chr5_2:39895515-39895534 | None:intergenic | 50.0% |
| AGGCATTCTCGAGATTGGAC+TGG | + | chr5_2:39895806-39895825 | Msa0769970:CDS | 50.0% | |
| GGCATTCTCGAGATTGGACT+GGG | + | chr5_2:39895807-39895826 | Msa0769970:CDS | 50.0% | |
| ! | TCTCGAGATTGGACTGGGAA+TGG | + | chr5_2:39895812-39895831 | Msa0769970:CDS | 50.0% |
| ! | GAGATTGGACTGGGAATGGA+TGG | + | chr5_2:39895816-39895835 | Msa0769970:CDS | 50.0% |
| GACTGGGAATGGATGGGTAA+AGG | + | chr5_2:39895823-39895842 | Msa0769970:CDS | 50.0% | |
| GGAATGGATGGGTAAAGGTG+AGG | + | chr5_2:39895828-39895847 | Msa0769970:CDS | 50.0% | |
| GATGGGTAAAGGTGAGGGAA+AGG | + | chr5_2:39895834-39895853 | Msa0769970:CDS | 50.0% | |
| AGGCAGCCTGATACTTACTC+GGG | + | chr5_2:39895965-39895984 | Msa0769970:CDS | 50.0% | |
| TCCAGGAAGAGGAATCGAAG+TGG | + | chr5_2:39896076-39896095 | Msa0769970:CDS | 50.0% | |
| TGAAAAGGGAAGGATCTCCC+TGG | - | chr5_2:39896231-39896250 | None:intergenic | 50.0% | |
| GCACGACTGAGGAACTGAAA+AGG | - | chr5_2:39896246-39896265 | None:intergenic | 50.0% | |
| CGTGCCGTCTTTAACCAACA+TGG | + | chr5_2:39896261-39896280 | Msa0769970:CDS | 50.0% | |
| ! | CTGTGTTTCTGCTAAGTGGG+AGG | - | chr5_2:39896361-39896380 | None:intergenic | 50.0% |
| AAAATGAGGCTCCGATGCCA+CGG | - | chr5_2:39896515-39896534 | None:intergenic | 50.0% | |
| GGCATCATCCTTGCTTCCTA+GGG | - | chr5_2:39896546-39896565 | None:intergenic | 50.0% | |
| AGGCATCATCCTTGCTTCCT+AGG | - | chr5_2:39896547-39896566 | None:intergenic | 50.0% | |
| AGCCGTTCTTCCGAAATGCC+TGG | - | chr5_2:39894033-39894052 | None:intergenic | 55.0% | |
| ! | GTAGTGCTGTGGACTGAGGA+CGG | - | chr5_2:39894749-39894768 | None:intergenic | 55.0% |
| CACAGCACTACGCCAAGTAC+CGG | + | chr5_2:39894758-39894777 | Msa0769970:CDS | 55.0% | |
| !! | GAGCGTGTCGAGCTTTGTTC+CGG | - | chr5_2:39894780-39894799 | None:intergenic | 55.0% |
| GAGGTCCTCTCTCAAGACAG+TGG | + | chr5_2:39895219-39895238 | Msa0769970:CDS | 55.0% | |
| CCCAGATCATCAGGTACCAC+AGG | - | chr5_2:39895465-39895484 | None:intergenic | 55.0% | |
| ACTCGGAGACCCAGATCATC+AGG | - | chr5_2:39895474-39895493 | None:intergenic | 55.0% | |
| TGGGTCTCCGAGTAGATGAG+AGG | + | chr5_2:39895481-39895500 | Msa0769970:CDS | 55.0% | |
| !! | CTCTGATAGTGGCCGGATCT+TGG | - | chr5_2:39895508-39895527 | None:intergenic | 55.0% |
| CGGCCACTATCAGAGAAACG+TGG | + | chr5_2:39895513-39895532 | Msa0769970:CDS | 55.0% | |
| GTTGATGCCTGGTGGCATGA+TGG | + | chr5_2:39895567-39895586 | Msa0769970:CDS | 55.0% | |
| ! | ATGCCTGGTGGCATGATGGA+TGG | + | chr5_2:39895571-39895590 | Msa0769970:CDS | 55.0% |
| !! | CTGGTGGCATGATGGATGGT+GGG | + | chr5_2:39895575-39895594 | Msa0769970:CDS | 55.0% |
| !! | TGGCATGATGGATGGTGGGA+AGG | + | chr5_2:39895579-39895598 | Msa0769970:CDS | 55.0% |
| GGTGGAAGTCATCCAGGAAG+AGG | + | chr5_2:39896065-39896084 | Msa0769970:CDS | 55.0% | |
| GCCACTTCGATTCCTCTTCC+TGG | - | chr5_2:39896080-39896099 | None:intergenic | 55.0% | |
| GGTTAAAGACGGCACGACTG+AGG | - | chr5_2:39896257-39896276 | None:intergenic | 55.0% | |
| ! | TGGCGTAGTGCTGTGGACTG+AGG | - | chr5_2:39894753-39894772 | None:intergenic | 60.0% |
| CGGTACTTGGCGTAGTGCTG+TGG | - | chr5_2:39894760-39894779 | None:intergenic | 60.0% | |
| CCACCATCCATCATGCCACC+AGG | - | chr5_2:39895577-39895596 | None:intergenic | 60.0% | |
| !! | CCTGGTGGCATGATGGATGG+TGG | + | chr5_2:39895574-39895593 | Msa0769970:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 39892760 | 39897071 | 39892760 | ID=Msa0769970;Name=Msa0769970 |
| chr5_2 | mRNA | 39892760 | 39897071 | 39892760 | ID=Msa0769970-mRNA-1;Parent=Msa0769970;Name=Msa0769970-mRNA-1;_AED=0.08;_eAED=0.08;_QI=114|1|1|1|0.83|0.71|7|754|685 |
| chr5_2 | exon | 39892760 | 39893168 | 39892760 | ID=Msa0769970-mRNA-1:exon:12765;Parent=Msa0769970-mRNA-1 |
| chr5_2 | exon | 39893763 | 39893833 | 39893763 | ID=Msa0769970-mRNA-1:exon:12766;Parent=Msa0769970-mRNA-1 |
| chr5_2 | exon | 39893941 | 39894063 | 39893941 | ID=Msa0769970-mRNA-1:exon:12767;Parent=Msa0769970-mRNA-1 |
| chr5_2 | exon | 39894523 | 39895350 | 39894523 | ID=Msa0769970-mRNA-1:exon:12768;Parent=Msa0769970-mRNA-1 |
| chr5_2 | exon | 39895441 | 39895651 | 39895441 | ID=Msa0769970-mRNA-1:exon:12769;Parent=Msa0769970-mRNA-1 |
| chr5_2 | exon | 39895768 | 39896852 | 39895768 | ID=Msa0769970-mRNA-1:exon:12770;Parent=Msa0769970-mRNA-1 |
| chr5_2 | exon | 39896873 | 39897071 | 39896873 | ID=Msa0769970-mRNA-1:exon:12771;Parent=Msa0769970-mRNA-1 |
| chr5_2 | five_prime_UTR | 39892760 | 39892873 | 39892760 | ID=Msa0769970-mRNA-1:five_prime_utr;Parent=Msa0769970-mRNA-1 |
| chr5_2 | CDS | 39892874 | 39893168 | 39892874 | ID=Msa0769970-mRNA-1:cds;Parent=Msa0769970-mRNA-1 |
| chr5_2 | CDS | 39893763 | 39893833 | 39893763 | ID=Msa0769970-mRNA-1:cds;Parent=Msa0769970-mRNA-1 |
| chr5_2 | CDS | 39893941 | 39894063 | 39893941 | ID=Msa0769970-mRNA-1:cds;Parent=Msa0769970-mRNA-1 |
| chr5_2 | CDS | 39894523 | 39895350 | 39894523 | ID=Msa0769970-mRNA-1:cds;Parent=Msa0769970-mRNA-1 |
| chr5_2 | CDS | 39895441 | 39895651 | 39895441 | ID=Msa0769970-mRNA-1:cds;Parent=Msa0769970-mRNA-1 |
| chr5_2 | CDS | 39895768 | 39896297 | 39895768 | ID=Msa0769970-mRNA-1:cds;Parent=Msa0769970-mRNA-1 |
| chr5_2 | three_prime_UTR | 39896298 | 39896852 | 39896298 | ID=Msa0769970-mRNA-1:three_prime_utr;Parent=Msa0769970-mRNA-1 |
| chr5_2 | three_prime_UTR | 39896873 | 39897071 | 39896873 | ID=Msa0769970-mRNA-1:three_prime_utr;Parent=Msa0769970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
