AlfalfaGEDB | Msa0749500

M. sativa cultivar zhongmu-4 / Msa0749500

KEGG: K05894
GO: GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0008150 GO:0008152 GO:0009611 GO:0016491 GO:0016627 GO:0016628 GO:0016629 GO:0044464 GO:0050896 GO:0055114
PFAM: PF00724.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749500	sp\|B9FSC8\|OPR11_ORYSJ	77.473	364	80	1	7	370	2	363	0.0	608

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749500	G7K3S2	97.035	371	11	0	1	371	1	371	0.0	752

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0037720	Msa0749500	0.805686	1.183919e-49	-8.615850e-47
Msa0622070	Msa0749500	0.830296	3.181526e-55	-8.615850e-47
Msa0652700	Msa0749500	0.808185	3.506991e-50	-8.615850e-47
Msa0738400	Msa0749500	0.803086	4.122034e-49	-8.615850e-47
Msa0749500	Msa0749510	0.991287	7.421393e-187	-8.615850e-47
Msa0749500	Msa0753410	0.808801	2.591239e-50	-8.615850e-47
Msa0749500	Msa0793910	0.980909	2.547017e-151	-8.615850e-47
Msa0749500	Msa0826370	0.803960	2.715721e-49	-8.615850e-47
Msa0749500	Msa0831430	0.994200	2.382062e-205	-8.615850e-47
Msa0749500	Msa0865810	0.806146	9.476345e-50	-8.615850e-47
Msa0749500	Msa0979050	0.842227	2.941879e-58	-8.615850e-47
Msa0749500	Msa0986160	0.839417	1.604974e-57	-8.615850e-47
Msa0749500	Msa1039650	0.849705	2.724168e-60	-8.615850e-47
Msa0749500	Msa1069770	0.800522	1.385401e-48	-8.615850e-47
Msa0749500	Msa1157200	0.802864	4.582356e-49	-8.615850e-47
Msa0749500	Msa1304980	0.839161	1.869672e-57	-8.615850e-47
Msa0749500	Msa1344220	0.806763	7.024536e-50	-8.615850e-47
Msa0749500	Msa1398110	0.802639	5.099354e-49	-8.615850e-47
Msa0749500	Msa1412410	0.812593	3.922184e-51	-8.615850e-47
Msa0749500	Msa1427860	0.820653	6.123140e-53	-8.615850e-47
Msa0749500	Msa1459930	0.814555	1.451389e-51	-8.615850e-47
Msa0128030	Msa0749500	0.801511	8.699731e-49	-8.615850e-47
Msa0129640	Msa0749500	0.821813	3.306423e-53	-8.615850e-47
Msa0166620	Msa0749500	0.810734	9.946490e-51	-8.615850e-47
Msa0194370	Msa0749500	-0.811037	8.554494e-51	-8.615850e-47
Msa0381470	Msa0749500	0.802348	5.854276e-49	-8.615850e-47
Msa0387300	Msa0749500	0.845703	3.442704e-59	-8.615850e-47
Msa0414720	Msa0749500	0.808987	2.364229e-50	-8.615850e-47
Msa0416040	Msa0749500	0.804918	1.715395e-49	-8.615850e-47
Msa0434140	Msa0749500	0.812502	4.104898e-51	-8.615850e-47
Msa0455830	Msa0749500	0.961076	2.766059e-119	-8.615850e-47
Msa0459630	Msa0749500	0.817956	2.520264e-52	-8.615850e-47
Msa0463890	Msa0749500	0.826799	2.224218e-54	-8.615850e-47
Msa0477660	Msa0749500	0.830383	3.029691e-55	-8.615850e-47
Msa0267230	Msa0749500	0.807535	4.821064e-50	-8.615850e-47
Msa0489070	Msa0749500	0.812770	3.587477e-51	-8.615850e-47
Msa0509420	Msa0749500	0.803881	2.820790e-49	-8.615850e-47
Msa0521720	Msa0749500	0.827724	1.335754e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749500	MtrunA17_Chr5g0394861	97.035	371	11	0	1	371	1	371	0.0	752
Msa0749500	MtrunA17_Chr5g0394891	92.183	371	27	1	1	371	1	369	0.0	715
Msa0749500	MtrunA17_Chr5g0394841	88.140	371	44	0	1	371	1	371	0.0	694
Msa0749500	MtrunA17_Chr5g0394751	86.376	367	42	3	5	371	1	359	0.0	651
Msa0749500	MtrunA17_Chr5g0394811	83.288	365	59	1	7	371	116	478	0.0	644
Msa0749500	MtrunA17_Chr5g0394811	61.074	149	46	4	18	157	1	146	6.11e-49	171
Msa0749500	MtrunA17_Chr5g0394771	84.384	365	49	3	7	371	35	391	0.0	637
Msa0749500	MtrunA17_Chr5g0395841	80.541	370	70	1	1	370	3	370	0.0	628
Msa0749500	MtrunA17_Chr3g0144001	69.505	364	105	2	8	371	6	363	0.0	533
Msa0749500	MtrunA17_Chr4g0070561	52.815	373	159	5	12	370	19	388	1.82e-138	400
Msa0749500	MtrunA17_Chr5g0394791	69.849	199	52	2	4	202	3	193	2.69e-93	277
Msa0749500	MtrunA17_Chr5g0394801	65.641	195	40	1	169	363	18	185	1.73e-84	256
Msa0749500	MtrunA17_Chr3g0130471	70.909	55	13	1	196	250	1	52	2.03e-18	79.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0749500	AT1G76690.1	76.550	371	85	1	1	371	3	371	0.0	603
Msa0749500	AT1G76680.1	77.135	363	81	1	9	371	9	369	0.0	596
Msa0749500	AT1G76680.2	72.165	388	81	2	9	371	9	394	0.0	582
Msa0749500	AT1G09400.1	68.976	332	95	2	18	349	1	324	1.30e-174	489
Msa0749500	AT1G09400.2	70.741	270	73	1	80	349	2	265	3.59e-144	409
Msa0749500	AT2G06050.2	51.459	377	162	5	12	370	12	385	6.54e-136	393
Msa0749500	AT2G06050.1	51.459	377	162	5	12	370	12	385	6.54e-136	393
Msa0749500	AT2G06050.3	51.459	377	162	5	12	370	12	385	6.54e-136	393
Msa0749500	AT1G17990.1	70.385	260	70	3	9	268	6	258	4.79e-135	386
Msa0749500	AT1G18020.1	70.385	260	70	3	9	268	6	258	4.79e-135	386
Msa0749500	AT1G17990.2	67.308	260	70	4	9	268	6	250	2.61e-126	364

Find 122 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTCTTACTCCTTACAAAA+TGG	0.186312	5_2:-3025677	Msa0749500:CDS
GCAAATCTCTTTGGCAAATC+TGG	0.201994	5_2:+3024362	None:intergenic
GTTGGAAGAGTTTCTGATTC+TGG	0.251518	5_2:-3025294	Msa0749500:intron
TAACGAATTGGGACTTTATA+TGG	0.259709	5_2:-3024609	Msa0749500:CDS
GCTTACTCTTACTAACTCTT+TGG	0.280591	5_2:-3024110	Msa0749500:three_prime_UTR
TACATTTCTGATCCAGTTCT+AGG	0.288195	5_2:-3024299	Msa0749500:CDS
ATTTCATTTCAGAGTTGTTT+TGG	0.300909	5_2:-3025562	Msa0749500:intron
ATCACGCAATCAAGTGAAAA+TGG	0.302409	5_2:-3025728	Msa0749500:exon
GTCAATGCCCTCAATAAATA+TGG	0.304167	5_2:-3024587	Msa0749500:CDS
AAAGGCACTTTCATGGTTGC+AGG	0.311740	5_2:-3024470	Msa0749500:CDS
CTCCTCTGAACAAGTATAAC+AGG	0.317873	5_2:-3024331	Msa0749500:CDS
CTCATCGGCACAAGGCTGTC+GGG	0.347385	5_2:+3024503	None:intergenic
ATCCAGACACGCCAGGTATA+TGG	0.350535	5_2:-3025401	Msa0749500:CDS
GTCCATATACCTGGCGTGTC+TGG	0.353329	5_2:+3025399	None:intergenic
TCAATGCCATAGCTGAAAAC+AGG	0.384447	5_2:-3024424	Msa0749500:CDS
AGACTCCAACCCTAACGAAT+TGG	0.384935	5_2:-3024621	Msa0749500:CDS
GGCCTTCAAAGGCACTTTCA+TGG	0.385984	5_2:-3024477	Msa0749500:CDS
AAACCATTACTTCGAATTTG+TGG	0.394649	5_2:+3025110	None:intergenic
CCAGTTTCTTCATTCAAGAA+AGG	0.397020	5_2:+3024262	None:intergenic
TGGTATTCTTTACTGTCATA+TGG	0.399133	5_2:-3024567	Msa0749500:CDS
CTTCTTACTCCTTACAAAAT+GGG	0.401056	5_2:-3025676	Msa0749500:CDS
ATATAAAGTCCCAATTCGTT+AGG	0.406105	5_2:+3024611	None:intergenic
GCATCAAGTGCAAATCTCTT+TGG	0.407422	5_2:+3024353	None:intergenic
GAGATAGGAGCTGATAAAGT+TGG	0.416753	5_2:-3024683	Msa0749500:CDS
GACTCCAACCCTAACGAATT+GGG	0.419325	5_2:-3024620	Msa0749500:CDS
GAACCGTTGTCGGTTTGCTT+TGG	0.420051	5_2:-3024729	Msa0749500:CDS
AGGGCAGACCTTGTTGTCTA+TGG	0.429742	5_2:-3024404	Msa0749500:CDS
CCTTTCTTGAATGAAGAAAC+TGG	0.431717	5_2:-3024262	Msa0749500:exon
TCATCTGTCCTTAGCCGCCT+TGG	0.434930	5_2:+3025065	None:intergenic
AACCATGAAAGTGCCTTTGA+AGG	0.438354	5_2:+3024475	None:intergenic
AAAGAATACCATATTTATTG+AGG	0.443514	5_2:+3024579	None:intergenic
GTGCAAATTGCAGGATTTGA+TGG	0.444981	5_2:-3024845	Msa0749500:intron
GCAAATTCGATCTATCTCAT+AGG	0.451023	5_2:-3025654	Msa0749500:intron
CAGTTTCTTCATTCAAGAAA+GGG	0.456188	5_2:+3024263	None:intergenic
CTAAAGAGCACGTCGAGGCT+TGG	0.460997	5_2:-3025377	Msa0749500:CDS
GCATGAACAGCATCCACAAT+GGG	0.464445	5_2:+3025351	None:intergenic
GACTTATCTGTAGATGATAT+TGG	0.464557	5_2:+3025140	None:intergenic
AATGACAGAACAGATGAATA+TGG	0.470052	5_2:-3024764	Msa0749500:CDS
CATTCTGCATATTCTGCAAA+AGG	0.473703	5_2:+3024647	None:intergenic
TCTCATCGGCACAAGGCTGT+CGG	0.479067	5_2:+3024502	None:intergenic
TTTGATGGGGTTGAAATCCA+TGG	0.479079	5_2:-3024830	Msa0749500:CDS
TAGTCAGTATAACCTAGAAC+TGG	0.480015	5_2:+3024287	None:intergenic
CGCAATCAAGTGAAAATGGC+TGG	0.482183	5_2:-3025724	Msa0749500:exon
GTCAGAGACACCGGTAGCTT+CGG	0.483228	5_2:+3025437	None:intergenic
CAGCCTTGTGCCGATGAGAA+AGG	0.488883	5_2:-3024498	Msa0749500:CDS
GTTGAAATCCATGGGGCTCA+TGG	0.498562	5_2:-3024821	Msa0749500:CDS
GATATTGGTGCCTGTCCATT+CGG	0.502015	5_2:+3025155	None:intergenic
TAGAGGATAGCATGAGGTTG+TGG	0.502110	5_2:+3025504	None:intergenic
TGCAAATTGCAGGATTTGAT+GGG	0.502113	5_2:-3024844	Msa0749500:intron
TTATAGTGAAACTTAAGTAA+TGG	0.503053	5_2:+3025794	None:intergenic
CATTTACAAAATGTGTGAAT+GGG	0.503904	5_2:+3024085	None:intergenic
CAGAGAGCCACCGGCTCTAA+CGG	0.506975	5_2:-3025474	Msa0749500:CDS
ACACCACAAATTCGAAGTAA+TGG	0.507759	5_2:-3025113	Msa0749500:CDS
CTCACAAGACAAAGATCCTA+TGG	0.508545	5_2:-3025534	Msa0749500:CDS
CCATTTACAAAATGTGTGAA+TGG	0.510823	5_2:+3024084	None:intergenic
AAGAATACCATATTTATTGA+GGG	0.515388	5_2:+3024580	None:intergenic
ATGCCAAATCTGACAAAAGA+AGG	0.517640	5_2:+3025317	None:intergenic
GAAGCTGTTGCAAATGAGAT+AGG	0.518438	5_2:-3024698	Msa0749500:CDS
TTAGTAAGAGTAAGCTTGAG+AGG	0.520497	5_2:+3024118	None:intergenic
TCATCGGCACAAGGCTGTCG+GGG	0.521557	5_2:+3024504	None:intergenic
TATAAAGTCCCAATTCGTTA+GGG	0.522588	5_2:+3024612	None:intergenic
GTAAGGAGTAAGAAGAGGAA+TGG	0.526420	5_2:+3025684	None:intergenic
TGGCTCTCTGTGAATAATAG+AGG	0.529112	5_2:+3025487	None:intergenic
GATCCCTTGAGAACCGTTGT+CGG	0.529555	5_2:-3024739	Msa0749500:CDS
TTGATGGGGTTGAAATCCAT+GGG	0.529612	5_2:-3024829	Msa0749500:CDS
CTTTCATGAATTGTTCAAGT+AGG	0.530510	5_2:+3024795	None:intergenic
CAAACCGACAACGGTTCTCA+AGG	0.533263	5_2:+3024735	None:intergenic
TAGTGAGGAGATTCCACACT+TGG	0.535155	5_2:+3024228	None:intergenic
TCTGTCCTTAGCCGCCTTGG+TGG	0.535739	5_2:+3025068	None:intergenic
AAGTCCCAATTCGTTAGGGT+TGG	0.539732	5_2:+3024616	None:intergenic
TCACACCACCAAGGCGGCTA+AGG	0.540861	5_2:-3025073	Msa0749500:CDS
ACTTGCTGCTAGAAATGCTA+TGG	0.544349	5_2:-3025015	Msa0749500:CDS
GTGGATGCTGTTCATGCTAA+AGG	0.544472	5_2:-3025345	Msa0749500:CDS
GCTAGAAATGCTATGGAAGC+TGG	0.548470	5_2:-3025008	Msa0749500:intron
CAAGGGTATCCAGACACGCC+AGG	0.555989	5_2:-3025408	Msa0749500:CDS
GGTGTCTCTGACACCGCTCA+AGG	0.561959	5_2:-3025426	Msa0749500:CDS
AGTTTATCAGCCGAATGGAC+AGG	0.564367	5_2:-3025165	Msa0749500:CDS
GAGAAGACCTCCGTTAGAGC+CGG	0.566754	5_2:+3025464	None:intergenic
CCTTTGAAGGCCTTTCTCAT+CGG	0.568654	5_2:+3024488	None:intergenic
GGAGGTTACGACCGACATGA+TGG	0.569456	5_2:-3024449	Msa0749500:CDS
CTTCTCATAACCGAAGCTAC+CGG	0.572746	5_2:-3025447	Msa0749500:CDS
AGGCCTTTCTCATCGGCACA+AGG	0.573077	5_2:+3024495	None:intergenic
TAGCAGAAAGCAATCTGCAA+GGG	0.577000	5_2:+3024191	None:intergenic
TATTATTCACAGAGAGCCAC+CGG	0.583608	5_2:-3025483	Msa0749500:CDS
TCAACAGTTTATCAGCCGAA+TGG	0.583793	5_2:-3025170	Msa0749500:intron
CCGATGAGAAAGGCCTTCAA+AGG	0.584601	5_2:-3024488	Msa0749500:CDS
TGCTCTTTAGTCCATATACC+TGG	0.585344	5_2:+3025390	None:intergenic
AGGTTGTGGAACGTTGCCAT+AGG	0.592868	5_2:+3025518	None:intergenic
GGCACTTTCATGGTTGCAGG+AGG	0.593746	5_2:-3024467	Msa0749500:CDS
GATAATGAACTTATTTAGTG+AGG	0.593789	5_2:+3024213	None:intergenic
TTTGCAGAATATGCAGAATG+TGG	0.598992	5_2:-3024644	Msa0749500:CDS
AAGACCTCCGTTAGAGCCGG+TGG	0.607283	5_2:+3025467	None:intergenic
GAGGTTACGACCGACATGAT+GGG	0.607847	5_2:-3024448	Msa0749500:CDS
TAGGATCTTTGTCTTGTGAG+TGG	0.610235	5_2:+3025537	None:intergenic
AGTTTCTTCATTCAAGAAAG+GGG	0.611551	5_2:+3024264	None:intergenic
TCCCTGTTATACTTGTTCAG+AGG	0.614414	5_2:+3024329	None:intergenic
GTGTCTCTGACACCGCTCAA+GGG	0.616121	5_2:-3025425	Msa0749500:CDS
TAGTGAAACTTAAGTAATGG+CGG	0.617391	5_2:+3025797	None:intergenic
CGAGGCTTGGAAACCCATTG+TGG	0.618914	5_2:-3025364	Msa0749500:CDS
CTTCCAAAGCAAACCGACAA+CGG	0.620487	5_2:+3024726	None:intergenic
CAATGCCATAGCTGAAAACA+GGG	0.621098	5_2:-3024423	Msa0749500:CDS
TATTCTTTACTGTCATATGG+TGG	0.623581	5_2:-3024564	Msa0749500:CDS
GTAGGTAGCCATGAGCCCCA+TGG	0.625089	5_2:+3024813	None:intergenic
AAACCGACAACGGTTCTCAA+GGG	0.626011	5_2:+3024736	None:intergenic
AGCATGAACAGCATCCACAA+TGG	0.632785	5_2:+3025350	None:intergenic
TTGAGCGGTGTCAGAGACAC+CGG	0.633714	5_2:+3025428	None:intergenic
ATAGCAGAAAGCAATCTGCA+AGG	0.641986	5_2:+3024190	None:intergenic
ATTTACAAAATGTGTGAATG+GGG	0.642740	5_2:+3024086	None:intergenic
GAACCAAGAATGAAAACTGT+TGG	0.645257	5_2:-3024542	Msa0749500:CDS
GACAGAACAGATGAATATGG+TGG	0.647355	5_2:-3024761	Msa0749500:CDS
AGAGCCACCGGCTCTAACGG+AGG	0.647688	5_2:-3025471	Msa0749500:CDS
TGGCATTGATCCCATCATGT+CGG	0.655421	5_2:+3024438	None:intergenic
GCAAATTGCAGGATTTGATG+GGG	0.659323	5_2:-3024843	Msa0749500:intron
TCCTCTGAACAAGTATAACA+GGG	0.662663	5_2:-3024330	Msa0749500:CDS
ACAAACGACCATAGACAACA+AGG	0.681842	5_2:+3024396	None:intergenic
TTGCAAAATTCACACCACCA+AGG	0.704294	5_2:-3025082	Msa0749500:CDS
CGTGTCTGGATACCCTTGAG+CGG	0.705121	5_2:+3025413	None:intergenic
GGTGCTGTAGCATCCAAGTG+TGG	0.706367	5_2:-3024241	Msa0749500:three_prime_UTR
GAATAATAGAGGATAGCATG+AGG	0.726209	5_2:+3025498	None:intergenic
TGATGGGGTTGAAATCCATG+GGG	0.726824	5_2:-3024828	Msa0749500:CDS
CAAAATTCACACCACCAAGG+CGG	0.740755	5_2:-3025079	Msa0749500:CDS
ATGGACTAAAGAGCACGTCG+AGG	0.748737	5_2:-3025382	Msa0749500:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CATTGAATAATTTTTTATTT+TGG	+	chr5_2:3024763-3024782	None:intergenic	10.0%
!!!	AATTGTAATTTTATAAAATC+AGG	+	chr5_2:3025752-3025771	None:intergenic	10.0%
!!!	CATTGAATAATTTTTTATTT+TGG	+	chr5_2:3024763-3024782	None:intergenic	10.0%
!!!	AATTGTAATTTTATAAAATC+AGG	+	chr5_2:3025752-3025771	None:intergenic	10.0%
!!	TTATAGTGAAACTTAAGTAA+TGG	+	chr5_2:3023927-3023946	None:intergenic	20.0%
!!	TATGAACATATGTGTATAAT+AGG	+	chr5_2:3024478-3024497	None:intergenic	20.0%
!!	TTGAAAATAACATGGAAAAT+GGG	+	chr5_2:3024532-3024551	None:intergenic	20.0%
!!	ATAAACTGTTGAAAATAACA+TGG	+	chr5_2:3024540-3024559	None:intergenic	20.0%
!!	AAGAATACCATATTTATTGA+GGG	+	chr5_2:3025141-3025160	None:intergenic	20.0%
!!	AAAGAATACCATATTTATTG+AGG	+	chr5_2:3025142-3025161	None:intergenic	20.0%
!!!	TTTTATCGAAAACTTCTTAT+TGG	+	chr5_2:3025721-3025740	None:intergenic	20.0%
!!	AAGTAACAAAAATGAGATAA+CGG	+	chr5_2:3025804-3025823	None:intergenic	20.0%
!!	TTATAGTGAAACTTAAGTAA+TGG	+	chr5_2:3023927-3023946	None:intergenic	20.0%
!!	TATGAACATATGTGTATAAT+AGG	+	chr5_2:3024478-3024497	None:intergenic	20.0%
!!	TTGAAAATAACATGGAAAAT+GGG	+	chr5_2:3024532-3024551	None:intergenic	20.0%
!!	ATAAACTGTTGAAAATAACA+TGG	+	chr5_2:3024540-3024559	None:intergenic	20.0%
!!	AAGAATACCATATTTATTGA+GGG	+	chr5_2:3025141-3025160	None:intergenic	20.0%
!!	AAAGAATACCATATTTATTG+AGG	+	chr5_2:3025142-3025161	None:intergenic	20.0%
!!!	TTTTATCGAAAACTTCTTAT+TGG	+	chr5_2:3025721-3025740	None:intergenic	20.0%
!!	AAGTAACAAAAATGAGATAA+CGG	+	chr5_2:3025804-3025823	None:intergenic	20.0%
!!	ATTTCATTTCAGAGTTGTTT+TGG	-	chr5_2:3024156-3024175	Msa0749500:three_prime_UTR	25.0%
!	GTTGAAAATAACATGGAAAA+TGG	+	chr5_2:3024533-3024552	None:intergenic	25.0%
!	GATAATGAACTTATTTAGTG+AGG	+	chr5_2:3025508-3025527	None:intergenic	25.0%
!	ATTTACAAAATGTGTGAATG+GGG	+	chr5_2:3025635-3025654	None:intergenic	25.0%
!	CATTTACAAAATGTGTGAAT+GGG	+	chr5_2:3025636-3025655	None:intergenic	25.0%
!!!	TTAAGTTTTGTAGTCATAAG+AGG	-	chr5_2:3025771-3025790	Msa0749500:five_prime_UTR	25.0%
!!	ATTTCATTTCAGAGTTGTTT+TGG	-	chr5_2:3024156-3024175	Msa0749500:three_prime_UTR	25.0%
!	GTTGAAAATAACATGGAAAA+TGG	+	chr5_2:3024533-3024552	None:intergenic	25.0%
!	GATAATGAACTTATTTAGTG+AGG	+	chr5_2:3025508-3025527	None:intergenic	25.0%
!	ATTTACAAAATGTGTGAATG+GGG	+	chr5_2:3025635-3025654	None:intergenic	25.0%
!	CATTTACAAAATGTGTGAAT+GGG	+	chr5_2:3025636-3025655	None:intergenic	25.0%
!!!	TTAAGTTTTGTAGTCATAAG+AGG	-	chr5_2:3025771-3025790	Msa0749500:five_prime_UTR	25.0%
	TAGTGAAACTTAAGTAATGG+CGG	+	chr5_2:3023924-3023943	None:intergenic	30.0%
!	ATTTTGTAAGGAGTAAGAAG+AGG	+	chr5_2:3024042-3024061	None:intergenic	30.0%
	TCTTCTTACTCCTTACAAAA+TGG	-	chr5_2:3024041-3024060	Msa0749500:three_prime_UTR	30.0%
	CTTCTTACTCCTTACAAAAT+GGG	-	chr5_2:3024042-3024061	Msa0749500:three_prime_UTR	30.0%
	GACTTATCTGTAGATGATAT+TGG	+	chr5_2:3024581-3024600	None:intergenic	30.0%
	AAACCATTACTTCGAATTTG+TGG	+	chr5_2:3024611-3024630	None:intergenic	30.0%
!!	AGATCTTTTTGTTGCTTCAA+AGG	-	chr5_2:3024810-3024829	Msa0749500:CDS	30.0%
!!	GATCTTTTTGTTGCTTCAAA+GGG	-	chr5_2:3024811-3024830	Msa0749500:CDS	30.0%
	ATTATGCAACATACTAACTG+TGG	-	chr5_2:3024851-3024870	Msa0749500:intron	30.0%
	CTTTCATGAATTGTTCAAGT+AGG	+	chr5_2:3024926-3024945	None:intergenic	30.0%
	AATGACAGAACAGATGAATA+TGG	-	chr5_2:3024954-3024973	Msa0749500:intron	30.0%
	TATAAAGTCCCAATTCGTTA+GGG	+	chr5_2:3025109-3025128	None:intergenic	30.0%
	ATATAAAGTCCCAATTCGTT+AGG	+	chr5_2:3025110-3025129	None:intergenic	30.0%
	TAACGAATTGGGACTTTATA+TGG	-	chr5_2:3025109-3025128	Msa0749500:CDS	30.0%
	TGGTATTCTTTACTGTCATA+TGG	-	chr5_2:3025151-3025170	Msa0749500:CDS	30.0%
	TATTCTTTACTGTCATATGG+TGG	-	chr5_2:3025154-3025173	Msa0749500:CDS	30.0%
	AGTTTCTTCATTCAAGAAAG+GGG	+	chr5_2:3025457-3025476	None:intergenic	30.0%
	CAGTTTCTTCATTCAAGAAA+GGG	+	chr5_2:3025458-3025477	None:intergenic	30.0%
!	GTCACTGAAATAAGATTTTG+AGG	-	chr5_2:3025558-3025577	Msa0749500:intron	30.0%
	CCATTTACAAAATGTGTGAA+TGG	+	chr5_2:3025637-3025656	None:intergenic	30.0%
!	CCATTCACACATTTTGTAAA+TGG	-	chr5_2:3025634-3025653	Msa0749500:intron	30.0%
!	ACACATTTTGTAAATGGTCA+GGG	-	chr5_2:3025640-3025659	Msa0749500:intron	30.0%
	TAGTGAAACTTAAGTAATGG+CGG	+	chr5_2:3023924-3023943	None:intergenic	30.0%
!	ATTTTGTAAGGAGTAAGAAG+AGG	+	chr5_2:3024042-3024061	None:intergenic	30.0%
	TCTTCTTACTCCTTACAAAA+TGG	-	chr5_2:3024041-3024060	Msa0749500:three_prime_UTR	30.0%
	CTTCTTACTCCTTACAAAAT+GGG	-	chr5_2:3024042-3024061	Msa0749500:three_prime_UTR	30.0%
	GACTTATCTGTAGATGATAT+TGG	+	chr5_2:3024581-3024600	None:intergenic	30.0%
	AAACCATTACTTCGAATTTG+TGG	+	chr5_2:3024611-3024630	None:intergenic	30.0%
!!	AGATCTTTTTGTTGCTTCAA+AGG	-	chr5_2:3024810-3024829	Msa0749500:CDS	30.0%
!!	GATCTTTTTGTTGCTTCAAA+GGG	-	chr5_2:3024811-3024830	Msa0749500:CDS	30.0%
	ATTATGCAACATACTAACTG+TGG	-	chr5_2:3024851-3024870	Msa0749500:intron	30.0%
	CTTTCATGAATTGTTCAAGT+AGG	+	chr5_2:3024926-3024945	None:intergenic	30.0%
	AATGACAGAACAGATGAATA+TGG	-	chr5_2:3024954-3024973	Msa0749500:intron	30.0%
	TATAAAGTCCCAATTCGTTA+GGG	+	chr5_2:3025109-3025128	None:intergenic	30.0%
	ATATAAAGTCCCAATTCGTT+AGG	+	chr5_2:3025110-3025129	None:intergenic	30.0%
	TAACGAATTGGGACTTTATA+TGG	-	chr5_2:3025109-3025128	Msa0749500:CDS	30.0%
	TGGTATTCTTTACTGTCATA+TGG	-	chr5_2:3025151-3025170	Msa0749500:CDS	30.0%
	TATTCTTTACTGTCATATGG+TGG	-	chr5_2:3025154-3025173	Msa0749500:CDS	30.0%
	AGTTTCTTCATTCAAGAAAG+GGG	+	chr5_2:3025457-3025476	None:intergenic	30.0%
	CAGTTTCTTCATTCAAGAAA+GGG	+	chr5_2:3025458-3025477	None:intergenic	30.0%
!	GTCACTGAAATAAGATTTTG+AGG	-	chr5_2:3025558-3025577	Msa0749500:intron	30.0%
	CCATTTACAAAATGTGTGAA+TGG	+	chr5_2:3025637-3025656	None:intergenic	30.0%
!	CCATTCACACATTTTGTAAA+TGG	-	chr5_2:3025634-3025653	Msa0749500:intron	30.0%
!	ACACATTTTGTAAATGGTCA+GGG	-	chr5_2:3025640-3025659	Msa0749500:intron	30.0%
	ATCACGCAATCAAGTGAAAA+TGG	-	chr5_2:3023990-3024009	Msa0749500:three_prime_UTR	35.0%
!	TCGAATTTGCCCATTTTGTA+AGG	+	chr5_2:3024054-3024073	None:intergenic	35.0%
	GCAAATTCGATCTATCTCAT+AGG	-	chr5_2:3024064-3024083	Msa0749500:three_prime_UTR	35.0%
	GAATAATAGAGGATAGCATG+AGG	+	chr5_2:3024223-3024242	None:intergenic	35.0%
!	CTACCTTCTTTTGTCAGATT+TGG	-	chr5_2:3024398-3024417	Msa0749500:CDS	35.0%
	ATGCCAAATCTGACAAAAGA+AGG	+	chr5_2:3024404-3024423	None:intergenic	35.0%
!	TTTTGTCAGATTTGGCATGT+TGG	-	chr5_2:3024406-3024425	Msa0749500:CDS	35.0%
	ACACCACAAATTCGAAGTAA+TGG	-	chr5_2:3024605-3024624	Msa0749500:CDS	35.0%
	TGCAAATTGCAGGATTTGAT+GGG	-	chr5_2:3024874-3024893	Msa0749500:intron	35.0%
	CATTCTGCATATTCTGCAAA+AGG	+	chr5_2:3025074-3025093	None:intergenic	35.0%
	TTTGCAGAATATGCAGAATG+TGG	-	chr5_2:3025074-3025093	Msa0749500:CDS	35.0%
	GTCAATGCCCTCAATAAATA+TGG	-	chr5_2:3025131-3025150	Msa0749500:CDS	35.0%
	GAACCAAGAATGAAAACTGT+TGG	-	chr5_2:3025176-3025195	Msa0749500:intron	35.0%
!	TCACCAACAGTTTTCATTCT+TGG	+	chr5_2:3025182-3025201	None:intergenic	35.0%
	TCCTCTGAACAAGTATAACA+GGG	-	chr5_2:3025388-3025407	Msa0749500:CDS	35.0%
	TACATTTCTGATCCAGTTCT+AGG	-	chr5_2:3025419-3025438	Msa0749500:CDS	35.0%
	TAGTCAGTATAACCTAGAAC+TGG	+	chr5_2:3025434-3025453	None:intergenic	35.0%
	CCAGTTTCTTCATTCAAGAA+AGG	+	chr5_2:3025459-3025478	None:intergenic	35.0%
	CCTTTCTTGAATGAAGAAAC+TGG	-	chr5_2:3025456-3025475	Msa0749500:CDS	35.0%
	TTAGTAAGAGTAAGCTTGAG+AGG	+	chr5_2:3025603-3025622	None:intergenic	35.0%
	GCTTACTCTTACTAACTCTT+TGG	-	chr5_2:3025608-3025627	Msa0749500:intron	35.0%
!	CACACATTTTGTAAATGGTC+AGG	-	chr5_2:3025639-3025658	Msa0749500:intron	35.0%
	ATCACGCAATCAAGTGAAAA+TGG	-	chr5_2:3023990-3024009	Msa0749500:three_prime_UTR	35.0%
!	TCGAATTTGCCCATTTTGTA+AGG	+	chr5_2:3024054-3024073	None:intergenic	35.0%
	GCAAATTCGATCTATCTCAT+AGG	-	chr5_2:3024064-3024083	Msa0749500:three_prime_UTR	35.0%
	GAATAATAGAGGATAGCATG+AGG	+	chr5_2:3024223-3024242	None:intergenic	35.0%
!	CTACCTTCTTTTGTCAGATT+TGG	-	chr5_2:3024398-3024417	Msa0749500:CDS	35.0%
	ATGCCAAATCTGACAAAAGA+AGG	+	chr5_2:3024404-3024423	None:intergenic	35.0%
!	TTTTGTCAGATTTGGCATGT+TGG	-	chr5_2:3024406-3024425	Msa0749500:CDS	35.0%
	ACACCACAAATTCGAAGTAA+TGG	-	chr5_2:3024605-3024624	Msa0749500:CDS	35.0%
	TGCAAATTGCAGGATTTGAT+GGG	-	chr5_2:3024874-3024893	Msa0749500:intron	35.0%
	CATTCTGCATATTCTGCAAA+AGG	+	chr5_2:3025074-3025093	None:intergenic	35.0%
	TTTGCAGAATATGCAGAATG+TGG	-	chr5_2:3025074-3025093	Msa0749500:CDS	35.0%
	GTCAATGCCCTCAATAAATA+TGG	-	chr5_2:3025131-3025150	Msa0749500:CDS	35.0%
	GAACCAAGAATGAAAACTGT+TGG	-	chr5_2:3025176-3025195	Msa0749500:intron	35.0%
!	TCACCAACAGTTTTCATTCT+TGG	+	chr5_2:3025182-3025201	None:intergenic	35.0%
	TCCTCTGAACAAGTATAACA+GGG	-	chr5_2:3025388-3025407	Msa0749500:CDS	35.0%
	TACATTTCTGATCCAGTTCT+AGG	-	chr5_2:3025419-3025438	Msa0749500:CDS	35.0%
	TAGTCAGTATAACCTAGAAC+TGG	+	chr5_2:3025434-3025453	None:intergenic	35.0%
	CCAGTTTCTTCATTCAAGAA+AGG	+	chr5_2:3025459-3025478	None:intergenic	35.0%
	CCTTTCTTGAATGAAGAAAC+TGG	-	chr5_2:3025456-3025475	Msa0749500:CDS	35.0%
	TTAGTAAGAGTAAGCTTGAG+AGG	+	chr5_2:3025603-3025622	None:intergenic	35.0%
	GCTTACTCTTACTAACTCTT+TGG	-	chr5_2:3025608-3025627	Msa0749500:intron	35.0%
!	CACACATTTTGTAAATGGTC+AGG	-	chr5_2:3025639-3025658	Msa0749500:intron	35.0%
	GTAAGGAGTAAGAAGAGGAA+TGG	+	chr5_2:3024037-3024056	None:intergenic	40.0%
	TAGGATCTTTGTCTTGTGAG+TGG	+	chr5_2:3024184-3024203	None:intergenic	40.0%
	CTCACAAGACAAAGATCCTA+TGG	-	chr5_2:3024184-3024203	Msa0749500:three_prime_UTR	40.0%
	TGGCTCTCTGTGAATAATAG+AGG	+	chr5_2:3024234-3024253	None:intergenic	40.0%
	TATTATTCACAGAGAGCCAC+CGG	-	chr5_2:3024235-3024254	Msa0749500:three_prime_UTR	40.0%
	TGCTCTTTAGTCCATATACC+TGG	+	chr5_2:3024331-3024350	None:intergenic	40.0%
	GTTGGAAGAGTTTCTGATTC+TGG	-	chr5_2:3024424-3024443	Msa0749500:CDS	40.0%
	TCAACAGTTTATCAGCCGAA+TGG	-	chr5_2:3024548-3024567	Msa0749500:CDS	40.0%
	TTGCAAAATTCACACCACCA+AGG	-	chr5_2:3024636-3024655	Msa0749500:CDS	40.0%
!	ACTTGCTGCTAGAAATGCTA+TGG	-	chr5_2:3024703-3024722	Msa0749500:CDS	40.0%
	GTGCAAATTGCAGGATTTGA+TGG	-	chr5_2:3024873-3024892	Msa0749500:intron	40.0%
	GCAAATTGCAGGATTTGATG+GGG	-	chr5_2:3024875-3024894	Msa0749500:intron	40.0%
	TTTGATGGGGTTGAAATCCA+TGG	-	chr5_2:3024888-3024907	Msa0749500:intron	40.0%
	TTGATGGGGTTGAAATCCAT+GGG	-	chr5_2:3024889-3024908	Msa0749500:intron	40.0%
	GACAGAACAGATGAATATGG+TGG	-	chr5_2:3024957-3024976	Msa0749500:intron	40.0%
	GAAGCTGTTGCAAATGAGAT+AGG	-	chr5_2:3025020-3025039	Msa0749500:CDS	40.0%
	GAGATAGGAGCTGATAAAGT+TGG	-	chr5_2:3025035-3025054	Msa0749500:CDS	40.0%
!!	AACCATGAAAGTGCCTTTGA+AGG	+	chr5_2:3025246-3025265	None:intergenic	40.0%
	TCAATGCCATAGCTGAAAAC+AGG	-	chr5_2:3025294-3025313	Msa0749500:intron	40.0%
	CAATGCCATAGCTGAAAACA+GGG	-	chr5_2:3025295-3025314	Msa0749500:CDS	40.0%
	ACAAACGACCATAGACAACA+AGG	+	chr5_2:3025325-3025344	None:intergenic	40.0%
	GCAAATCTCTTTGGCAAATC+TGG	+	chr5_2:3025359-3025378	None:intergenic	40.0%
	GCATCAAGTGCAAATCTCTT+TGG	+	chr5_2:3025368-3025387	None:intergenic	40.0%
	CTCCTCTGAACAAGTATAAC+AGG	-	chr5_2:3025387-3025406	Msa0749500:CDS	40.0%
	TCCCTGTTATACTTGTTCAG+AGG	+	chr5_2:3025392-3025411	None:intergenic	40.0%
	TAGCAGAAAGCAATCTGCAA+GGG	+	chr5_2:3025530-3025549	None:intergenic	40.0%
	ATAGCAGAAAGCAATCTGCA+AGG	+	chr5_2:3025531-3025550	None:intergenic	40.0%
	GTAAGGAGTAAGAAGAGGAA+TGG	+	chr5_2:3024037-3024056	None:intergenic	40.0%
	TAGGATCTTTGTCTTGTGAG+TGG	+	chr5_2:3024184-3024203	None:intergenic	40.0%
	CTCACAAGACAAAGATCCTA+TGG	-	chr5_2:3024184-3024203	Msa0749500:three_prime_UTR	40.0%
	TGGCTCTCTGTGAATAATAG+AGG	+	chr5_2:3024234-3024253	None:intergenic	40.0%
	TATTATTCACAGAGAGCCAC+CGG	-	chr5_2:3024235-3024254	Msa0749500:three_prime_UTR	40.0%
	TGCTCTTTAGTCCATATACC+TGG	+	chr5_2:3024331-3024350	None:intergenic	40.0%
	GTTGGAAGAGTTTCTGATTC+TGG	-	chr5_2:3024424-3024443	Msa0749500:CDS	40.0%
	TCAACAGTTTATCAGCCGAA+TGG	-	chr5_2:3024548-3024567	Msa0749500:CDS	40.0%
	TTGCAAAATTCACACCACCA+AGG	-	chr5_2:3024636-3024655	Msa0749500:CDS	40.0%
!	ACTTGCTGCTAGAAATGCTA+TGG	-	chr5_2:3024703-3024722	Msa0749500:CDS	40.0%
	GTGCAAATTGCAGGATTTGA+TGG	-	chr5_2:3024873-3024892	Msa0749500:intron	40.0%
	GCAAATTGCAGGATTTGATG+GGG	-	chr5_2:3024875-3024894	Msa0749500:intron	40.0%
	TTTGATGGGGTTGAAATCCA+TGG	-	chr5_2:3024888-3024907	Msa0749500:intron	40.0%
	TTGATGGGGTTGAAATCCAT+GGG	-	chr5_2:3024889-3024908	Msa0749500:intron	40.0%
	GACAGAACAGATGAATATGG+TGG	-	chr5_2:3024957-3024976	Msa0749500:intron	40.0%
	GAAGCTGTTGCAAATGAGAT+AGG	-	chr5_2:3025020-3025039	Msa0749500:CDS	40.0%
	GAGATAGGAGCTGATAAAGT+TGG	-	chr5_2:3025035-3025054	Msa0749500:CDS	40.0%
!!	AACCATGAAAGTGCCTTTGA+AGG	+	chr5_2:3025246-3025265	None:intergenic	40.0%
	TCAATGCCATAGCTGAAAAC+AGG	-	chr5_2:3025294-3025313	Msa0749500:intron	40.0%
	CAATGCCATAGCTGAAAACA+GGG	-	chr5_2:3025295-3025314	Msa0749500:CDS	40.0%
	ACAAACGACCATAGACAACA+AGG	+	chr5_2:3025325-3025344	None:intergenic	40.0%
	GCAAATCTCTTTGGCAAATC+TGG	+	chr5_2:3025359-3025378	None:intergenic	40.0%
	GCATCAAGTGCAAATCTCTT+TGG	+	chr5_2:3025368-3025387	None:intergenic	40.0%
	CTCCTCTGAACAAGTATAAC+AGG	-	chr5_2:3025387-3025406	Msa0749500:CDS	40.0%
	TCCCTGTTATACTTGTTCAG+AGG	+	chr5_2:3025392-3025411	None:intergenic	40.0%
	TAGCAGAAAGCAATCTGCAA+GGG	+	chr5_2:3025530-3025549	None:intergenic	40.0%
	ATAGCAGAAAGCAATCTGCA+AGG	+	chr5_2:3025531-3025550	None:intergenic	40.0%
	CGCAATCAAGTGAAAATGGC+TGG	-	chr5_2:3023994-3024013	Msa0749500:three_prime_UTR	45.0%
	TAGAGGATAGCATGAGGTTG+TGG	+	chr5_2:3024217-3024236	None:intergenic	45.0%
	CTTCTCATAACCGAAGCTAC+CGG	-	chr5_2:3024271-3024290	Msa0749500:CDS	45.0%
	GCATGAACAGCATCCACAAT+GGG	+	chr5_2:3024370-3024389	None:intergenic	45.0%
	AGCATGAACAGCATCCACAA+TGG	+	chr5_2:3024371-3024390	None:intergenic	45.0%
	GTGGATGCTGTTCATGCTAA+AGG	-	chr5_2:3024373-3024392	Msa0749500:CDS	45.0%
	AGTTTATCAGCCGAATGGAC+AGG	-	chr5_2:3024553-3024572	Msa0749500:CDS	45.0%
!	GATATTGGTGCCTGTCCATT+CGG	+	chr5_2:3024566-3024585	None:intergenic	45.0%
	CAAAATTCACACCACCAAGG+CGG	-	chr5_2:3024639-3024658	Msa0749500:CDS	45.0%
	GCTAGAAATGCTATGGAAGC+TGG	-	chr5_2:3024710-3024729	Msa0749500:CDS	45.0%
!!	TTGTTGCTTCAAAGGGCACT+AGG	-	chr5_2:3024818-3024837	Msa0749500:CDS	45.0%
	CTAACTGTGGTGCAAATTGC+AGG	-	chr5_2:3024864-3024883	Msa0749500:intron	45.0%
	TGATGGGGTTGAAATCCATG+GGG	-	chr5_2:3024890-3024909	Msa0749500:intron	45.0%
	AAACCGACAACGGTTCTCAA+GGG	+	chr5_2:3024985-3025004	None:intergenic	45.0%
	CTTCCAAAGCAAACCGACAA+CGG	+	chr5_2:3024995-3025014	None:intergenic	45.0%
	AGACTCCAACCCTAACGAAT+TGG	-	chr5_2:3025097-3025116	Msa0749500:CDS	45.0%
	GACTCCAACCCTAACGAATT+GGG	-	chr5_2:3025098-3025117	Msa0749500:CDS	45.0%
	AAGTCCCAATTCGTTAGGGT+TGG	+	chr5_2:3025105-3025124	None:intergenic	45.0%
!	CCTTTGAAGGCCTTTCTCAT+CGG	+	chr5_2:3025233-3025252	None:intergenic	45.0%
!!	AAAGGCACTTTCATGGTTGC+AGG	-	chr5_2:3025248-3025267	Msa0749500:intron	45.0%
!!	TGGCATTGATCCCATCATGT+CGG	+	chr5_2:3025283-3025302	None:intergenic	45.0%
	TAGTGAGGAGATTCCACACT+TGG	+	chr5_2:3025493-3025512	None:intergenic	45.0%
	CGCAATCAAGTGAAAATGGC+TGG	-	chr5_2:3023994-3024013	Msa0749500:three_prime_UTR	45.0%
	TAGAGGATAGCATGAGGTTG+TGG	+	chr5_2:3024217-3024236	None:intergenic	45.0%
	CTTCTCATAACCGAAGCTAC+CGG	-	chr5_2:3024271-3024290	Msa0749500:CDS	45.0%
	GCATGAACAGCATCCACAAT+GGG	+	chr5_2:3024370-3024389	None:intergenic	45.0%
	AGCATGAACAGCATCCACAA+TGG	+	chr5_2:3024371-3024390	None:intergenic	45.0%
	GTGGATGCTGTTCATGCTAA+AGG	-	chr5_2:3024373-3024392	Msa0749500:CDS	45.0%
	AGTTTATCAGCCGAATGGAC+AGG	-	chr5_2:3024553-3024572	Msa0749500:CDS	45.0%
!	GATATTGGTGCCTGTCCATT+CGG	+	chr5_2:3024566-3024585	None:intergenic	45.0%
	CAAAATTCACACCACCAAGG+CGG	-	chr5_2:3024639-3024658	Msa0749500:CDS	45.0%
	GCTAGAAATGCTATGGAAGC+TGG	-	chr5_2:3024710-3024729	Msa0749500:CDS	45.0%
!!	TTGTTGCTTCAAAGGGCACT+AGG	-	chr5_2:3024818-3024837	Msa0749500:CDS	45.0%
	CTAACTGTGGTGCAAATTGC+AGG	-	chr5_2:3024864-3024883	Msa0749500:intron	45.0%
	TGATGGGGTTGAAATCCATG+GGG	-	chr5_2:3024890-3024909	Msa0749500:intron	45.0%
	AAACCGACAACGGTTCTCAA+GGG	+	chr5_2:3024985-3025004	None:intergenic	45.0%
	CTTCCAAAGCAAACCGACAA+CGG	+	chr5_2:3024995-3025014	None:intergenic	45.0%
	AGACTCCAACCCTAACGAAT+TGG	-	chr5_2:3025097-3025116	Msa0749500:CDS	45.0%
	GACTCCAACCCTAACGAATT+GGG	-	chr5_2:3025098-3025117	Msa0749500:CDS	45.0%
	AAGTCCCAATTCGTTAGGGT+TGG	+	chr5_2:3025105-3025124	None:intergenic	45.0%
!	CCTTTGAAGGCCTTTCTCAT+CGG	+	chr5_2:3025233-3025252	None:intergenic	45.0%
!!	AAAGGCACTTTCATGGTTGC+AGG	-	chr5_2:3025248-3025267	Msa0749500:intron	45.0%
!!	TGGCATTGATCCCATCATGT+CGG	+	chr5_2:3025283-3025302	None:intergenic	45.0%
	TAGTGAGGAGATTCCACACT+TGG	+	chr5_2:3025493-3025512	None:intergenic	45.0%
	AGGTTGTGGAACGTTGCCAT+AGG	+	chr5_2:3024203-3024222	None:intergenic	50.0%
	ATCCAGACACGCCAGGTATA+TGG	-	chr5_2:3024317-3024336	Msa0749500:CDS	50.0%
!	ATGGACTAAAGAGCACGTCG+AGG	-	chr5_2:3024336-3024355	Msa0749500:CDS	50.0%
	GTTGAAATCCATGGGGCTCA+TGG	-	chr5_2:3024897-3024916	Msa0749500:intron	50.0%
	GATCCCTTGAGAACCGTTGT+CGG	-	chr5_2:3024979-3024998	Msa0749500:intron	50.0%
	CAAACCGACAACGGTTCTCA+AGG	+	chr5_2:3024986-3025005	None:intergenic	50.0%
!!	GAACCGTTGTCGGTTTGCTT+TGG	-	chr5_2:3024989-3025008	Msa0749500:intron	50.0%
	CCGATGAGAAAGGCCTTCAA+AGG	-	chr5_2:3025230-3025249	Msa0749500:intron	50.0%
!!	GGCCTTCAAAGGCACTTTCA+TGG	-	chr5_2:3025241-3025260	Msa0749500:intron	50.0%
	GAGGTTACGACCGACATGAT+GGG	-	chr5_2:3025270-3025289	Msa0749500:intron	50.0%
!	GTCTGCCCTGTTTTCAGCTA+TGG	+	chr5_2:3025303-3025322	None:intergenic	50.0%
!	AGGGCAGACCTTGTTGTCTA+TGG	-	chr5_2:3025314-3025333	Msa0749500:CDS	50.0%
	AGGTTGTGGAACGTTGCCAT+AGG	+	chr5_2:3024203-3024222	None:intergenic	50.0%
	ATCCAGACACGCCAGGTATA+TGG	-	chr5_2:3024317-3024336	Msa0749500:CDS	50.0%
!	ATGGACTAAAGAGCACGTCG+AGG	-	chr5_2:3024336-3024355	Msa0749500:CDS	50.0%
	GTTGAAATCCATGGGGCTCA+TGG	-	chr5_2:3024897-3024916	Msa0749500:intron	50.0%
	GATCCCTTGAGAACCGTTGT+CGG	-	chr5_2:3024979-3024998	Msa0749500:intron	50.0%
	CAAACCGACAACGGTTCTCA+AGG	+	chr5_2:3024986-3025005	None:intergenic	50.0%
!!	GAACCGTTGTCGGTTTGCTT+TGG	-	chr5_2:3024989-3025008	Msa0749500:intron	50.0%
	CCGATGAGAAAGGCCTTCAA+AGG	-	chr5_2:3025230-3025249	Msa0749500:intron	50.0%
!!	GGCCTTCAAAGGCACTTTCA+TGG	-	chr5_2:3025241-3025260	Msa0749500:intron	50.0%
	GAGGTTACGACCGACATGAT+GGG	-	chr5_2:3025270-3025289	Msa0749500:intron	50.0%
!	GTCTGCCCTGTTTTCAGCTA+TGG	+	chr5_2:3025303-3025322	None:intergenic	50.0%
!	AGGGCAGACCTTGTTGTCTA+TGG	-	chr5_2:3025314-3025333	Msa0749500:CDS	50.0%
	GAGAAGACCTCCGTTAGAGC+CGG	+	chr5_2:3024257-3024276	None:intergenic	55.0%
	GTCAGAGACACCGGTAGCTT+CGG	+	chr5_2:3024284-3024303	None:intergenic	55.0%
!	TTGAGCGGTGTCAGAGACAC+CGG	+	chr5_2:3024293-3024312	None:intergenic	55.0%
	GTGTCTCTGACACCGCTCAA+GGG	-	chr5_2:3024293-3024312	Msa0749500:CDS	55.0%
	CGTGTCTGGATACCCTTGAG+CGG	+	chr5_2:3024308-3024327	None:intergenic	55.0%
	GTCCATATACCTGGCGTGTC+TGG	+	chr5_2:3024322-3024341	None:intergenic	55.0%
!	CTAAAGAGCACGTCGAGGCT+TGG	-	chr5_2:3024341-3024360	Msa0749500:CDS	55.0%
	CGAGGCTTGGAAACCCATTG+TGG	-	chr5_2:3024354-3024373	Msa0749500:CDS	55.0%
	TCATCTGTCCTTAGCCGCCT+TGG	+	chr5_2:3024656-3024675	None:intergenic	55.0%
	TCTCATCGGCACAAGGCTGT+CGG	+	chr5_2:3025219-3025238	None:intergenic	55.0%
!	CAGCCTTGTGCCGATGAGAA+AGG	-	chr5_2:3025220-3025239	Msa0749500:intron	55.0%
	AGGCCTTTCTCATCGGCACA+AGG	+	chr5_2:3025226-3025245	None:intergenic	55.0%
	GGCACTTTCATGGTTGCAGG+AGG	-	chr5_2:3025251-3025270	Msa0749500:intron	55.0%
	GGAGGTTACGACCGACATGA+TGG	-	chr5_2:3025269-3025288	Msa0749500:intron	55.0%
!	GGTGCTGTAGCATCCAAGTG+TGG	-	chr5_2:3025477-3025496	Msa0749500:CDS	55.0%
	GAGAAGACCTCCGTTAGAGC+CGG	+	chr5_2:3024257-3024276	None:intergenic	55.0%
	GTCAGAGACACCGGTAGCTT+CGG	+	chr5_2:3024284-3024303	None:intergenic	55.0%
!	TTGAGCGGTGTCAGAGACAC+CGG	+	chr5_2:3024293-3024312	None:intergenic	55.0%
	GTGTCTCTGACACCGCTCAA+GGG	-	chr5_2:3024293-3024312	Msa0749500:CDS	55.0%
	CGTGTCTGGATACCCTTGAG+CGG	+	chr5_2:3024308-3024327	None:intergenic	55.0%
	GTCCATATACCTGGCGTGTC+TGG	+	chr5_2:3024322-3024341	None:intergenic	55.0%
!	CTAAAGAGCACGTCGAGGCT+TGG	-	chr5_2:3024341-3024360	Msa0749500:CDS	55.0%
	CGAGGCTTGGAAACCCATTG+TGG	-	chr5_2:3024354-3024373	Msa0749500:CDS	55.0%
	TCATCTGTCCTTAGCCGCCT+TGG	+	chr5_2:3024656-3024675	None:intergenic	55.0%
	TCTCATCGGCACAAGGCTGT+CGG	+	chr5_2:3025219-3025238	None:intergenic	55.0%
!	CAGCCTTGTGCCGATGAGAA+AGG	-	chr5_2:3025220-3025239	Msa0749500:intron	55.0%
	AGGCCTTTCTCATCGGCACA+AGG	+	chr5_2:3025226-3025245	None:intergenic	55.0%
	GGCACTTTCATGGTTGCAGG+AGG	-	chr5_2:3025251-3025270	Msa0749500:intron	55.0%
	GGAGGTTACGACCGACATGA+TGG	-	chr5_2:3025269-3025288	Msa0749500:intron	55.0%
!	GGTGCTGTAGCATCCAAGTG+TGG	-	chr5_2:3025477-3025496	Msa0749500:CDS	55.0%
!!	CAGAGAGCCACCGGCTCTAA+CGG	-	chr5_2:3024244-3024263	Msa0749500:three_prime_UTR	60.0%
	AAGACCTCCGTTAGAGCCGG+TGG	+	chr5_2:3024254-3024273	None:intergenic	60.0%
	GGTGTCTCTGACACCGCTCA+AGG	-	chr5_2:3024292-3024311	Msa0749500:CDS	60.0%
!!	CAAGGGTATCCAGACACGCC+AGG	-	chr5_2:3024310-3024329	Msa0749500:CDS	60.0%
	TCACACCACCAAGGCGGCTA+AGG	-	chr5_2:3024645-3024664	Msa0749500:CDS	60.0%
	TCTGTCCTTAGCCGCCTTGG+TGG	+	chr5_2:3024653-3024672	None:intergenic	60.0%
	GTAGGTAGCCATGAGCCCCA+TGG	+	chr5_2:3024908-3024927	None:intergenic	60.0%
	TCATCGGCACAAGGCTGTCG+GGG	+	chr5_2:3025217-3025236	None:intergenic	60.0%
	CTCATCGGCACAAGGCTGTC+GGG	+	chr5_2:3025218-3025237	None:intergenic	60.0%
!!	CAGAGAGCCACCGGCTCTAA+CGG	-	chr5_2:3024244-3024263	Msa0749500:three_prime_UTR	60.0%
	AAGACCTCCGTTAGAGCCGG+TGG	+	chr5_2:3024254-3024273	None:intergenic	60.0%
	GGTGTCTCTGACACCGCTCA+AGG	-	chr5_2:3024292-3024311	Msa0749500:CDS	60.0%
!!	CAAGGGTATCCAGACACGCC+AGG	-	chr5_2:3024310-3024329	Msa0749500:CDS	60.0%
	TCACACCACCAAGGCGGCTA+AGG	-	chr5_2:3024645-3024664	Msa0749500:CDS	60.0%
	TCTGTCCTTAGCCGCCTTGG+TGG	+	chr5_2:3024653-3024672	None:intergenic	60.0%
	GTAGGTAGCCATGAGCCCCA+TGG	+	chr5_2:3024908-3024927	None:intergenic	60.0%
	TCATCGGCACAAGGCTGTCG+GGG	+	chr5_2:3025217-3025236	None:intergenic	60.0%
	CTCATCGGCACAAGGCTGTC+GGG	+	chr5_2:3025218-3025237	None:intergenic	60.0%
!!	AGAGCCACCGGCTCTAACGG+AGG	-	chr5_2:3024247-3024266	Msa0749500:three_prime_UTR	65.0%
!!	AGAGCCACCGGCTCTAACGG+AGG	-	chr5_2:3024247-3024266	Msa0749500:three_prime_UTR	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_2	gene	3023909	3025831	3023909	ID=Msa0749500;Name=Msa0749500
chr5_2	mRNA	3023909	3025831	3023909	ID=Msa0749500-mRNA-1;Parent=Msa0749500;Name=Msa0749500-mRNA-1;_AED=0.14;_eAED=0.14;_QI=100\|1\|1\|1\|1\|1\|4\|362\|371
chr5_2	exon	3023909	3024854	3023909	ID=Msa0749500-mRNA-1:exon:1042;Parent=Msa0749500-mRNA-1
chr5_2	exon	3025009	3025185	3025009	ID=Msa0749500-mRNA-1:exon:1041;Parent=Msa0749500-mRNA-1
chr5_2	exon	3025295	3025572	3025295	ID=Msa0749500-mRNA-1:exon:1040;Parent=Msa0749500-mRNA-1
chr5_2	exon	3025655	3025831	3025655	ID=Msa0749500-mRNA-1:exon:1039;Parent=Msa0749500-mRNA-1
chr5_2	five_prime_UTR	3025732	3025831	3025732	ID=Msa0749500-mRNA-1:five_prime_utr;Parent=Msa0749500-mRNA-1
chr5_2	CDS	3025655	3025731	3025655	ID=Msa0749500-mRNA-1:cds;Parent=Msa0749500-mRNA-1
chr5_2	CDS	3025295	3025572	3025295	ID=Msa0749500-mRNA-1:cds;Parent=Msa0749500-mRNA-1
chr5_2	CDS	3025009	3025185	3025009	ID=Msa0749500-mRNA-1:cds;Parent=Msa0749500-mRNA-1
chr5_2	CDS	3024271	3024854	3024271	ID=Msa0749500-mRNA-1:cds;Parent=Msa0749500-mRNA-1
chr5_2	three_prime_UTR	3023909	3024270	3023909	ID=Msa0749500-mRNA-1:three_prime_utr;Parent=Msa0749500-mRNA-1

Gene Sequence

>Msa0749500

ATGGCTGGTATTGTTGAATCTGATACCATTCCTCTTCTTACTCCTTACAAAATGGGCAAATTCGATCTATCTCATAGAGTTGTTTTGGCACCACTCACAAGACAAAGATCCTATGGCAACGTTCCACAACCTCATGCTATCCTCTATTATTCACAGAGAGCCACCGGCTCTAACGGAGGTCTTCTCATAACCGAAGCTACCGGTGTCTCTGACACCGCTCAAGGGTATCCAGACACGCCAGGTATATGGACTAAAGAGCACGTCGAGGCTTGGAAACCCATTGTGGATGCTGTTCATGCTAAAGGTGCTACCTTCTTTTGTCAGATTTGGCATGTTGGAAGAGTTTCTGATTCTGTTTATCAGCCGAATGGACAGGCACCAATATCATCTACAGATAAGTCACTCACACCACAAATTCGAAGTAATGGTTTTAATATTGCAAAATTCACACCACCAAGGCGGCTAAGGACAGATGAAATTTCGAACATTGTCAATGACTTCAGACTTGCTGCTAGAAATGCTATGGAAGCTGGATTTGATGGGGTTGAAATCCATGGGGCTCATGGCTACCTACTTGAACAATTCATGAAAGATAAAGTGAATGACAGAACAGATGAATATGGTGGATCCCTTGAGAACCGTTGTCGGTTTGCTTTGGAAGTTGTTGAAGCTGTTGCAAATGAGATAGGAGCTGATAAAGTTGGAATTAGACTATCACCTTTTGCAGAATATGCAGAATGTGGAGACTCCAACCCTAACGAATTGGGACTTTATATGGTCAATGCCCTCAATAAATATGGTATTCTTTACTGTCATATGGTGGAACCAAGAATGAAAACTGTTGGTGAAAAAACTGAAAGCCCCGACAGCCTTGTGCCGATGAGAAAGGCCTTCAAAGGCACTTTCATGGTTGCAGGAGGTTACGACCGACATGATGGGATCAATGCCATAGCTGAAAACAGGGCAGACCTTGTTGTCTATGGTCGTTTGTTCTTAGCTAATCCAGATTTGCCAAAGAGATTTGCACTTGATGCTCCTCTGAACAAGTATAACAGGGAGACGTTCTACATTTCTGATCCAGTTCTAGGTTATACTGACTACCCCTTTCTTGAATGA

Protein sequence

>Msa0749500

MAGIVESDTIPLLTPYKMGKFDLSHRVVLAPLTRQRSYGNVPQPHAILYYSQRATGSNGGLLITEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGATFFCQIWHVGRVSDSVYQPNGQAPISSTDKSLTPQIRSNGFNIAKFTPPRRLRTDEISNIVNDFRLAARNAMEAGFDGVEIHGAHGYLLEQFMKDKVNDRTDEYGGSLENRCRFALEVVEAVANEIGADKVGIRLSPFAEYAECGDSNPNELGLYMVNALNKYGILYCHMVEPRMKTVGEKTESPDSLVPMRKAFKGTFMVAGGYDRHDGINAIAENRADLVVYGRLFLANPDLPKRFALDAPLNKYNRETFYISDPVLGYTDYPFLE*