AlfalfaGEDB | Msa0831430

M. sativa cultivar zhongmu-4 / Msa0831430

KEGG: K05894
GO: GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0006950 GO:0008150 GO:0008152 GO:0009611 GO:0016491 GO:0016627 GO:0016628 GO:0016629 GO:0044464 GO:0050896 GO:0055114
PFAM: PF00724.23

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0831430	XP_003610767.1	97.035	371	11	0	1	371	1	371	0.0	752

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0831430	sp\|B9FSC8\|OPR11_ORYSJ	77.473	364	80	1	7	370	2	363	0.0	608

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0831430	G7K3S2	97.035	371	11	0	1	371	1	371	0.0	752

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0029010	Msa0831430	0.804208	2.412404e-49	-8.615850e-47
Msa0037720	Msa0831430	0.803337	3.658602e-49	-8.615850e-47
Msa0622070	Msa0831430	0.829966	3.830166e-55	-8.615850e-47
Msa0652700	Msa0831430	0.813001	3.191595e-51	-8.615850e-47
Msa0721260	Msa0831430	0.803073	4.147810e-49	-8.615850e-47
Msa0749500	Msa0831430	0.994200	2.382062e-205	-8.615850e-47
Msa0749510	Msa0831430	0.995516	4.674673e-217	-8.615850e-47
Msa0753410	Msa0831430	0.808822	2.564370e-50	-8.615850e-47
Msa0793910	Msa0831430	0.985055	2.158620e-162	-8.615850e-47
Msa0826370	Msa0831430	0.801923	7.158606e-49	-8.615850e-47
Msa0831430	Msa0865810	0.804016	2.644899e-49	-8.615850e-47
Msa0831430	Msa0979050	0.839006	2.050953e-57	-8.615850e-47
Msa0831430	Msa0986160	0.832608	8.576557e-56	-8.615850e-47
Msa0831430	Msa1039650	0.850598	1.530839e-60	-8.615850e-47
Msa0831430	Msa1069770	0.808559	2.918950e-50	-8.615850e-47
Msa0831430	Msa1157200	0.806290	8.836810e-50	-8.615850e-47
Msa0831430	Msa1304980	0.840284	9.538017e-58	-8.615850e-47
Msa0831430	Msa1314810	0.804563	2.034348e-49	-8.615850e-47
Msa0831430	Msa1344220	0.806661	7.382718e-50	-8.615850e-47
Msa0831430	Msa1398110	0.806410	8.339860e-50	-8.615850e-47
Msa0831430	Msa1412410	0.813789	2.142755e-51	-8.615850e-47
Msa0831430	Msa1427860	0.823194	1.579275e-53	-8.615850e-47
Msa0831430	Msa1459930	0.816898	4.362373e-52	-8.615850e-47
Msa0121970	Msa0831430	0.800883	1.169394e-48	-8.615850e-47
Msa0128030	Msa0831430	0.804935	1.701100e-49	-8.615850e-47
Msa0129640	Msa0831430	0.822479	2.316923e-53	-8.615850e-47
Msa0166620	Msa0831430	0.813403	2.604917e-51	-8.615850e-47
Msa0194370	Msa0831430	-0.814521	1.476981e-51	-8.615850e-47
Msa0381470	Msa0831430	0.806639	7.461201e-50	-8.615850e-47
Msa0387300	Msa0831430	0.843090	1.734669e-58	-8.615850e-47
Msa0414720	Msa0831430	0.806888	6.610472e-50	-8.615850e-47
Msa0416040	Msa0831430	0.809043	2.299047e-50	-8.615850e-47
Msa0434140	Msa0831430	0.813038	3.132514e-51	-8.615850e-47
Msa0455830	Msa0831430	0.957458	2.587415e-115	-8.615850e-47
Msa0459630	Msa0831430	0.814841	1.254518e-51	-8.615850e-47
Msa0463890	Msa0831430	0.830365	3.060275e-55	-8.615850e-47
Msa0477660	Msa0831430	0.832078	1.160762e-55	-8.615850e-47
Msa0240430	Msa0831430	0.800104	1.685568e-48	-8.615850e-47
Msa0267230	Msa0831430	0.802571	5.266746e-49	-8.615850e-47
Msa0489070	Msa0831430	0.811437	7.005050e-51	-8.615850e-47
Msa0509420	Msa0831430	0.808790	2.604433e-50	-8.615850e-47
Msa0521720	Msa0831430	0.829492	4.994418e-55	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0831430	MtrunA17_Chr5g0394861	97.035	371	11	0	1	371	1	371	0.0	752
Msa0831430	MtrunA17_Chr5g0394891	92.183	371	27	1	1	371	1	369	0.0	715
Msa0831430	MtrunA17_Chr5g0394841	88.140	371	44	0	1	371	1	371	0.0	694
Msa0831430	MtrunA17_Chr5g0394751	86.376	367	42	3	5	371	1	359	0.0	651
Msa0831430	MtrunA17_Chr5g0394811	83.288	365	59	1	7	371	116	478	0.0	644
Msa0831430	MtrunA17_Chr5g0394811	61.074	149	46	4	18	157	1	146	6.11e-49	171
Msa0831430	MtrunA17_Chr5g0394771	84.384	365	49	3	7	371	35	391	0.0	637
Msa0831430	MtrunA17_Chr5g0395841	80.541	370	70	1	1	370	3	370	0.0	628
Msa0831430	MtrunA17_Chr3g0144001	69.505	364	105	2	8	371	6	363	0.0	533
Msa0831430	MtrunA17_Chr4g0070561	52.815	373	159	5	12	370	19	388	1.82e-138	400
Msa0831430	MtrunA17_Chr5g0394791	69.849	199	52	2	4	202	3	193	2.69e-93	277
Msa0831430	MtrunA17_Chr5g0394801	65.641	195	40	1	169	363	18	185	1.73e-84	256
Msa0831430	MtrunA17_Chr3g0130471	70.909	55	13	1	196	250	1	52	2.03e-18	79.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0831430	AT1G76690.1	76.550	371	85	1	1	371	3	371	0.0	603
Msa0831430	AT1G76680.1	77.135	363	81	1	9	371	9	369	0.0	596
Msa0831430	AT1G76680.2	72.165	388	81	2	9	371	9	394	0.0	582
Msa0831430	AT1G09400.1	68.976	332	95	2	18	349	1	324	1.30e-174	489
Msa0831430	AT1G09400.2	70.741	270	73	1	80	349	2	265	3.59e-144	409
Msa0831430	AT2G06050.2	51.459	377	162	5	12	370	12	385	6.54e-136	393
Msa0831430	AT2G06050.1	51.459	377	162	5	12	370	12	385	6.54e-136	393
Msa0831430	AT2G06050.3	51.459	377	162	5	12	370	12	385	6.54e-136	393
Msa0831430	AT1G17990.1	70.385	260	70	3	9	268	6	258	4.79e-135	386
Msa0831430	AT1G18020.1	70.385	260	70	3	9	268	6	258	4.79e-135	386
Msa0831430	AT1G17990.2	67.308	260	70	4	9	268	6	250	2.61e-126	364

Find 122 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTCTTACTCCTTACAAAA+TGG	0.186312	5_4:-4421726	Msa0831430:CDS
GCAAATCTCTTTGGCAAATC+TGG	0.201994	5_4:+4420411	None:intergenic
GTTGGAAGAGTTTCTGATTC+TGG	0.251518	5_4:-4421343	Msa0831430:intron
TAACGAATTGGGACTTTATA+TGG	0.259709	5_4:-4420658	Msa0831430:CDS
GCTTACTCTTACTAACTCTT+TGG	0.280591	5_4:-4420159	Msa0831430:three_prime_UTR
TACATTTCTGATCCAGTTCT+AGG	0.288195	5_4:-4420348	Msa0831430:CDS
ATTTCATTTCAGAGTTGTTT+TGG	0.300909	5_4:-4421611	Msa0831430:intron
ATCACGCAATCAAGTGAAAA+TGG	0.302409	5_4:-4421777	Msa0831430:exon
GTCAATGCCCTCAATAAATA+TGG	0.304167	5_4:-4420636	Msa0831430:CDS
AAAGGCACTTTCATGGTTGC+AGG	0.311740	5_4:-4420519	Msa0831430:CDS
CTCCTCTGAACAAGTATAAC+AGG	0.317873	5_4:-4420380	Msa0831430:CDS
CTCATCGGCACAAGGCTGTC+GGG	0.347385	5_4:+4420552	None:intergenic
ATCCAGACACGCCAGGTATA+TGG	0.350535	5_4:-4421450	Msa0831430:CDS
GTCCATATACCTGGCGTGTC+TGG	0.353329	5_4:+4421448	None:intergenic
TCAATGCCATAGCTGAAAAC+AGG	0.384447	5_4:-4420473	Msa0831430:CDS
AGACTCCAACCCTAACGAAT+TGG	0.384935	5_4:-4420670	Msa0831430:CDS
GGCCTTCAAAGGCACTTTCA+TGG	0.385984	5_4:-4420526	Msa0831430:CDS
AAACCATTACTTCGAATTTG+TGG	0.394649	5_4:+4421159	None:intergenic
CCAGTTTCTTCATTCAAGAA+AGG	0.397020	5_4:+4420311	None:intergenic
TGGTATTCTTTACTGTCATA+TGG	0.399133	5_4:-4420616	Msa0831430:CDS
CTTCTTACTCCTTACAAAAT+GGG	0.401056	5_4:-4421725	Msa0831430:CDS
ATATAAAGTCCCAATTCGTT+AGG	0.406105	5_4:+4420660	None:intergenic
GCATCAAGTGCAAATCTCTT+TGG	0.407422	5_4:+4420402	None:intergenic
GAGATAGGAGCTGATAAAGT+TGG	0.416753	5_4:-4420732	Msa0831430:CDS
GACTCCAACCCTAACGAATT+GGG	0.419325	5_4:-4420669	Msa0831430:CDS
GAACCGTTGTCGGTTTGCTT+TGG	0.420051	5_4:-4420778	Msa0831430:CDS
AGGGCAGACCTTGTTGTCTA+TGG	0.429742	5_4:-4420453	Msa0831430:CDS
CCTTTCTTGAATGAAGAAAC+TGG	0.431717	5_4:-4420311	Msa0831430:exon
TCATCTGTCCTTAGCCGCCT+TGG	0.434930	5_4:+4421114	None:intergenic
AACCATGAAAGTGCCTTTGA+AGG	0.438354	5_4:+4420524	None:intergenic
AAAGAATACCATATTTATTG+AGG	0.443514	5_4:+4420628	None:intergenic
GTGCAAATTGCAGGATTTGA+TGG	0.444981	5_4:-4420894	Msa0831430:intron
GCAAATTCGATCTATCTCAT+AGG	0.451023	5_4:-4421703	Msa0831430:intron
CAGTTTCTTCATTCAAGAAA+GGG	0.456188	5_4:+4420312	None:intergenic
CTAAAGAGCACGTCGAGGCT+TGG	0.460997	5_4:-4421426	Msa0831430:CDS
GCATGAACAGCATCCACAAT+GGG	0.464445	5_4:+4421400	None:intergenic
GACTTATCTGTAGATGATAT+TGG	0.464557	5_4:+4421189	None:intergenic
AATGACAGAACAGATGAATA+TGG	0.470052	5_4:-4420813	Msa0831430:CDS
CATTCTGCATATTCTGCAAA+AGG	0.473703	5_4:+4420696	None:intergenic
TCTCATCGGCACAAGGCTGT+CGG	0.479067	5_4:+4420551	None:intergenic
TTTGATGGGGTTGAAATCCA+TGG	0.479079	5_4:-4420879	Msa0831430:CDS
TAGTCAGTATAACCTAGAAC+TGG	0.480015	5_4:+4420336	None:intergenic
CGCAATCAAGTGAAAATGGC+TGG	0.482183	5_4:-4421773	Msa0831430:exon
GTCAGAGACACCGGTAGCTT+CGG	0.483228	5_4:+4421486	None:intergenic
CAGCCTTGTGCCGATGAGAA+AGG	0.488883	5_4:-4420547	Msa0831430:CDS
GTTGAAATCCATGGGGCTCA+TGG	0.498562	5_4:-4420870	Msa0831430:CDS
GATATTGGTGCCTGTCCATT+CGG	0.502015	5_4:+4421204	None:intergenic
TAGAGGATAGCATGAGGTTG+TGG	0.502110	5_4:+4421553	None:intergenic
TGCAAATTGCAGGATTTGAT+GGG	0.502113	5_4:-4420893	Msa0831430:intron
TTATAGTGAAACTTAAGTAA+TGG	0.503053	5_4:+4421843	None:intergenic
CATTTACAAAATGTGTGAAT+GGG	0.503904	5_4:+4420134	None:intergenic
CAGAGAGCCACCGGCTCTAA+CGG	0.506975	5_4:-4421523	Msa0831430:CDS
ACACCACAAATTCGAAGTAA+TGG	0.507759	5_4:-4421162	Msa0831430:CDS
CTCACAAGACAAAGATCCTA+TGG	0.508545	5_4:-4421583	Msa0831430:CDS
CCATTTACAAAATGTGTGAA+TGG	0.510823	5_4:+4420133	None:intergenic
AAGAATACCATATTTATTGA+GGG	0.515388	5_4:+4420629	None:intergenic
ATGCCAAATCTGACAAAAGA+AGG	0.517640	5_4:+4421366	None:intergenic
GAAGCTGTTGCAAATGAGAT+AGG	0.518438	5_4:-4420747	Msa0831430:CDS
TTAGTAAGAGTAAGCTTGAG+AGG	0.520497	5_4:+4420167	None:intergenic
TCATCGGCACAAGGCTGTCG+GGG	0.521557	5_4:+4420553	None:intergenic
TATAAAGTCCCAATTCGTTA+GGG	0.522588	5_4:+4420661	None:intergenic
GTAAGGAGTAAGAAGAGGAA+TGG	0.526420	5_4:+4421733	None:intergenic
TGGCTCTCTGTGAATAATAG+AGG	0.529112	5_4:+4421536	None:intergenic
GATCCCTTGAGAACCGTTGT+CGG	0.529555	5_4:-4420788	Msa0831430:CDS
TTGATGGGGTTGAAATCCAT+GGG	0.529612	5_4:-4420878	Msa0831430:CDS
CTTTCATGAATTGTTCAAGT+AGG	0.530510	5_4:+4420844	None:intergenic
CAAACCGACAACGGTTCTCA+AGG	0.533263	5_4:+4420784	None:intergenic
TAGTGAGGAGATTCCACACT+TGG	0.535155	5_4:+4420277	None:intergenic
TCTGTCCTTAGCCGCCTTGG+TGG	0.535739	5_4:+4421117	None:intergenic
AAGTCCCAATTCGTTAGGGT+TGG	0.539732	5_4:+4420665	None:intergenic
TCACACCACCAAGGCGGCTA+AGG	0.540861	5_4:-4421122	Msa0831430:CDS
ACTTGCTGCTAGAAATGCTA+TGG	0.544349	5_4:-4421064	Msa0831430:CDS
GTGGATGCTGTTCATGCTAA+AGG	0.544472	5_4:-4421394	Msa0831430:CDS
GCTAGAAATGCTATGGAAGC+TGG	0.548470	5_4:-4421057	Msa0831430:intron
CAAGGGTATCCAGACACGCC+AGG	0.555989	5_4:-4421457	Msa0831430:CDS
GGTGTCTCTGACACCGCTCA+AGG	0.561959	5_4:-4421475	Msa0831430:CDS
AGTTTATCAGCCGAATGGAC+AGG	0.564367	5_4:-4421214	Msa0831430:CDS
GAGAAGACCTCCGTTAGAGC+CGG	0.566754	5_4:+4421513	None:intergenic
CCTTTGAAGGCCTTTCTCAT+CGG	0.568654	5_4:+4420537	None:intergenic
GGAGGTTACGACCGACATGA+TGG	0.569456	5_4:-4420498	Msa0831430:CDS
CTTCTCATAACCGAAGCTAC+CGG	0.572746	5_4:-4421496	Msa0831430:CDS
AGGCCTTTCTCATCGGCACA+AGG	0.573077	5_4:+4420544	None:intergenic
TAGCAGAAAGCAATCTGCAA+GGG	0.577000	5_4:+4420240	None:intergenic
TATTATTCACAGAGAGCCAC+CGG	0.583608	5_4:-4421532	Msa0831430:CDS
TCAACAGTTTATCAGCCGAA+TGG	0.583793	5_4:-4421219	Msa0831430:intron
CCGATGAGAAAGGCCTTCAA+AGG	0.584601	5_4:-4420537	Msa0831430:CDS
TGCTCTTTAGTCCATATACC+TGG	0.585344	5_4:+4421439	None:intergenic
AGGTTGTGGAACGTTGCCAT+AGG	0.592868	5_4:+4421567	None:intergenic
GGCACTTTCATGGTTGCAGG+AGG	0.593746	5_4:-4420516	Msa0831430:CDS
GATAATGAACTTATTTAGTG+AGG	0.593789	5_4:+4420262	None:intergenic
TTTGCAGAATATGCAGAATG+TGG	0.598992	5_4:-4420693	Msa0831430:CDS
AAGACCTCCGTTAGAGCCGG+TGG	0.607283	5_4:+4421516	None:intergenic
GAGGTTACGACCGACATGAT+GGG	0.607847	5_4:-4420497	Msa0831430:CDS
TAGGATCTTTGTCTTGTGAG+TGG	0.610235	5_4:+4421586	None:intergenic
AGTTTCTTCATTCAAGAAAG+GGG	0.611551	5_4:+4420313	None:intergenic
TCCCTGTTATACTTGTTCAG+AGG	0.614414	5_4:+4420378	None:intergenic
GTGTCTCTGACACCGCTCAA+GGG	0.616121	5_4:-4421474	Msa0831430:CDS
TAGTGAAACTTAAGTAATGG+CGG	0.617391	5_4:+4421846	None:intergenic
CGAGGCTTGGAAACCCATTG+TGG	0.618914	5_4:-4421413	Msa0831430:CDS
CTTCCAAAGCAAACCGACAA+CGG	0.620487	5_4:+4420775	None:intergenic
CAATGCCATAGCTGAAAACA+GGG	0.621098	5_4:-4420472	Msa0831430:CDS
TATTCTTTACTGTCATATGG+TGG	0.623581	5_4:-4420613	Msa0831430:CDS
GTAGGTAGCCATGAGCCCCA+TGG	0.625089	5_4:+4420862	None:intergenic
AAACCGACAACGGTTCTCAA+GGG	0.626011	5_4:+4420785	None:intergenic
AGCATGAACAGCATCCACAA+TGG	0.632785	5_4:+4421399	None:intergenic
TTGAGCGGTGTCAGAGACAC+CGG	0.633714	5_4:+4421477	None:intergenic
ATAGCAGAAAGCAATCTGCA+AGG	0.641986	5_4:+4420239	None:intergenic
ATTTACAAAATGTGTGAATG+GGG	0.642740	5_4:+4420135	None:intergenic
GAACCAAGAATGAAAACTGT+TGG	0.645257	5_4:-4420591	Msa0831430:CDS
GACAGAACAGATGAATATGG+TGG	0.647355	5_4:-4420810	Msa0831430:CDS
AGAGCCACCGGCTCTAACGG+AGG	0.647688	5_4:-4421520	Msa0831430:CDS
TGGCATTGATCCCATCATGT+CGG	0.655421	5_4:+4420487	None:intergenic
GCAAATTGCAGGATTTGATG+GGG	0.659323	5_4:-4420892	Msa0831430:intron
TCCTCTGAACAAGTATAACA+GGG	0.662663	5_4:-4420379	Msa0831430:CDS
ACAAACGACCATAGACAACA+AGG	0.681842	5_4:+4420445	None:intergenic
TTGCAAAATTCACACCACCA+AGG	0.704294	5_4:-4421131	Msa0831430:CDS
CGTGTCTGGATACCCTTGAG+CGG	0.705121	5_4:+4421462	None:intergenic
GGTGCTGTAGCATCCAAGTG+TGG	0.706367	5_4:-4420290	Msa0831430:three_prime_UTR
GAATAATAGAGGATAGCATG+AGG	0.726209	5_4:+4421547	None:intergenic
TGATGGGGTTGAAATCCATG+GGG	0.726824	5_4:-4420877	Msa0831430:CDS
CAAAATTCACACCACCAAGG+CGG	0.740755	5_4:-4421128	Msa0831430:CDS
ATGGACTAAAGAGCACGTCG+AGG	0.748737	5_4:-4421431	Msa0831430:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CATTGAATAATTTTTTATTT+TGG	+	chr5_4:4420812-4420831	None:intergenic	10.0%
!!!	AATTGTAATTTTATAAAATC+AGG	+	chr5_4:4421801-4421820	None:intergenic	10.0%
!!!	CATTGAATAATTTTTTATTT+TGG	+	chr5_4:4420812-4420831	None:intergenic	10.0%
!!!	AATTGTAATTTTATAAAATC+AGG	+	chr5_4:4421801-4421820	None:intergenic	10.0%
!!	TTATAGTGAAACTTAAGTAA+TGG	+	chr5_4:4419976-4419995	None:intergenic	20.0%
!!	TATGAACATATGTGTATAAT+AGG	+	chr5_4:4420527-4420546	None:intergenic	20.0%
!!	TTGAAAATAACATGGAAAAT+GGG	+	chr5_4:4420581-4420600	None:intergenic	20.0%
!!	ATAAACTGTTGAAAATAACA+TGG	+	chr5_4:4420589-4420608	None:intergenic	20.0%
!!	AAGAATACCATATTTATTGA+GGG	+	chr5_4:4421190-4421209	None:intergenic	20.0%
!!	AAAGAATACCATATTTATTG+AGG	+	chr5_4:4421191-4421210	None:intergenic	20.0%
!!!	TTTTATCGAAAACTTCTTAT+TGG	+	chr5_4:4421770-4421789	None:intergenic	20.0%
!!	AAGTAACAAAAATGAGATAA+CGG	+	chr5_4:4421853-4421872	None:intergenic	20.0%
!!	TTATAGTGAAACTTAAGTAA+TGG	+	chr5_4:4419976-4419995	None:intergenic	20.0%
!!	TATGAACATATGTGTATAAT+AGG	+	chr5_4:4420527-4420546	None:intergenic	20.0%
!!	TTGAAAATAACATGGAAAAT+GGG	+	chr5_4:4420581-4420600	None:intergenic	20.0%
!!	ATAAACTGTTGAAAATAACA+TGG	+	chr5_4:4420589-4420608	None:intergenic	20.0%
!!	AAGAATACCATATTTATTGA+GGG	+	chr5_4:4421190-4421209	None:intergenic	20.0%
!!	AAAGAATACCATATTTATTG+AGG	+	chr5_4:4421191-4421210	None:intergenic	20.0%
!!!	TTTTATCGAAAACTTCTTAT+TGG	+	chr5_4:4421770-4421789	None:intergenic	20.0%
!!	AAGTAACAAAAATGAGATAA+CGG	+	chr5_4:4421853-4421872	None:intergenic	20.0%
!!	ATTTCATTTCAGAGTTGTTT+TGG	-	chr5_4:4420205-4420224	Msa0831430:three_prime_UTR	25.0%
!	GTTGAAAATAACATGGAAAA+TGG	+	chr5_4:4420582-4420601	None:intergenic	25.0%
!	GATAATGAACTTATTTAGTG+AGG	+	chr5_4:4421557-4421576	None:intergenic	25.0%
!	ATTTACAAAATGTGTGAATG+GGG	+	chr5_4:4421684-4421703	None:intergenic	25.0%
!	CATTTACAAAATGTGTGAAT+GGG	+	chr5_4:4421685-4421704	None:intergenic	25.0%
!!!	TTAAGTTTTGTAGTCATAAG+AGG	-	chr5_4:4421820-4421839	Msa0831430:five_prime_UTR	25.0%
!!	ATTTCATTTCAGAGTTGTTT+TGG	-	chr5_4:4420205-4420224	Msa0831430:three_prime_UTR	25.0%
!	GTTGAAAATAACATGGAAAA+TGG	+	chr5_4:4420582-4420601	None:intergenic	25.0%
!	GATAATGAACTTATTTAGTG+AGG	+	chr5_4:4421557-4421576	None:intergenic	25.0%
!	ATTTACAAAATGTGTGAATG+GGG	+	chr5_4:4421684-4421703	None:intergenic	25.0%
!	CATTTACAAAATGTGTGAAT+GGG	+	chr5_4:4421685-4421704	None:intergenic	25.0%
!!!	TTAAGTTTTGTAGTCATAAG+AGG	-	chr5_4:4421820-4421839	Msa0831430:five_prime_UTR	25.0%
	TAGTGAAACTTAAGTAATGG+CGG	+	chr5_4:4419973-4419992	None:intergenic	30.0%
!	ATTTTGTAAGGAGTAAGAAG+AGG	+	chr5_4:4420091-4420110	None:intergenic	30.0%
	TCTTCTTACTCCTTACAAAA+TGG	-	chr5_4:4420090-4420109	Msa0831430:three_prime_UTR	30.0%
	CTTCTTACTCCTTACAAAAT+GGG	-	chr5_4:4420091-4420110	Msa0831430:three_prime_UTR	30.0%
	GACTTATCTGTAGATGATAT+TGG	+	chr5_4:4420630-4420649	None:intergenic	30.0%
	AAACCATTACTTCGAATTTG+TGG	+	chr5_4:4420660-4420679	None:intergenic	30.0%
!!	AGATCTTTTTGTTGCTTCAA+AGG	-	chr5_4:4420859-4420878	Msa0831430:CDS	30.0%
!!	GATCTTTTTGTTGCTTCAAA+GGG	-	chr5_4:4420860-4420879	Msa0831430:CDS	30.0%
	ATTATGCAACATACTAACTG+TGG	-	chr5_4:4420900-4420919	Msa0831430:intron	30.0%
	CTTTCATGAATTGTTCAAGT+AGG	+	chr5_4:4420975-4420994	None:intergenic	30.0%
	AATGACAGAACAGATGAATA+TGG	-	chr5_4:4421003-4421022	Msa0831430:intron	30.0%
	TATAAAGTCCCAATTCGTTA+GGG	+	chr5_4:4421158-4421177	None:intergenic	30.0%
	ATATAAAGTCCCAATTCGTT+AGG	+	chr5_4:4421159-4421178	None:intergenic	30.0%
	TAACGAATTGGGACTTTATA+TGG	-	chr5_4:4421158-4421177	Msa0831430:CDS	30.0%
	TGGTATTCTTTACTGTCATA+TGG	-	chr5_4:4421200-4421219	Msa0831430:CDS	30.0%
	TATTCTTTACTGTCATATGG+TGG	-	chr5_4:4421203-4421222	Msa0831430:CDS	30.0%
	AGTTTCTTCATTCAAGAAAG+GGG	+	chr5_4:4421506-4421525	None:intergenic	30.0%
	CAGTTTCTTCATTCAAGAAA+GGG	+	chr5_4:4421507-4421526	None:intergenic	30.0%
!	GTCACTGAAATAAGATTTTG+AGG	-	chr5_4:4421607-4421626	Msa0831430:intron	30.0%
	CCATTTACAAAATGTGTGAA+TGG	+	chr5_4:4421686-4421705	None:intergenic	30.0%
!	CCATTCACACATTTTGTAAA+TGG	-	chr5_4:4421683-4421702	Msa0831430:intron	30.0%
!	ACACATTTTGTAAATGGTCA+GGG	-	chr5_4:4421689-4421708	Msa0831430:intron	30.0%
	TAGTGAAACTTAAGTAATGG+CGG	+	chr5_4:4419973-4419992	None:intergenic	30.0%
!	ATTTTGTAAGGAGTAAGAAG+AGG	+	chr5_4:4420091-4420110	None:intergenic	30.0%
	TCTTCTTACTCCTTACAAAA+TGG	-	chr5_4:4420090-4420109	Msa0831430:three_prime_UTR	30.0%
	CTTCTTACTCCTTACAAAAT+GGG	-	chr5_4:4420091-4420110	Msa0831430:three_prime_UTR	30.0%
	GACTTATCTGTAGATGATAT+TGG	+	chr5_4:4420630-4420649	None:intergenic	30.0%
	AAACCATTACTTCGAATTTG+TGG	+	chr5_4:4420660-4420679	None:intergenic	30.0%
!!	AGATCTTTTTGTTGCTTCAA+AGG	-	chr5_4:4420859-4420878	Msa0831430:CDS	30.0%
!!	GATCTTTTTGTTGCTTCAAA+GGG	-	chr5_4:4420860-4420879	Msa0831430:CDS	30.0%
	ATTATGCAACATACTAACTG+TGG	-	chr5_4:4420900-4420919	Msa0831430:intron	30.0%
	CTTTCATGAATTGTTCAAGT+AGG	+	chr5_4:4420975-4420994	None:intergenic	30.0%
	AATGACAGAACAGATGAATA+TGG	-	chr5_4:4421003-4421022	Msa0831430:intron	30.0%
	TATAAAGTCCCAATTCGTTA+GGG	+	chr5_4:4421158-4421177	None:intergenic	30.0%
	ATATAAAGTCCCAATTCGTT+AGG	+	chr5_4:4421159-4421178	None:intergenic	30.0%
	TAACGAATTGGGACTTTATA+TGG	-	chr5_4:4421158-4421177	Msa0831430:CDS	30.0%
	TGGTATTCTTTACTGTCATA+TGG	-	chr5_4:4421200-4421219	Msa0831430:CDS	30.0%
	TATTCTTTACTGTCATATGG+TGG	-	chr5_4:4421203-4421222	Msa0831430:CDS	30.0%
	AGTTTCTTCATTCAAGAAAG+GGG	+	chr5_4:4421506-4421525	None:intergenic	30.0%
	CAGTTTCTTCATTCAAGAAA+GGG	+	chr5_4:4421507-4421526	None:intergenic	30.0%
!	GTCACTGAAATAAGATTTTG+AGG	-	chr5_4:4421607-4421626	Msa0831430:intron	30.0%
	CCATTTACAAAATGTGTGAA+TGG	+	chr5_4:4421686-4421705	None:intergenic	30.0%
!	CCATTCACACATTTTGTAAA+TGG	-	chr5_4:4421683-4421702	Msa0831430:intron	30.0%
!	ACACATTTTGTAAATGGTCA+GGG	-	chr5_4:4421689-4421708	Msa0831430:intron	30.0%
	ATCACGCAATCAAGTGAAAA+TGG	-	chr5_4:4420039-4420058	Msa0831430:three_prime_UTR	35.0%
!	TCGAATTTGCCCATTTTGTA+AGG	+	chr5_4:4420103-4420122	None:intergenic	35.0%
	GCAAATTCGATCTATCTCAT+AGG	-	chr5_4:4420113-4420132	Msa0831430:three_prime_UTR	35.0%
	GAATAATAGAGGATAGCATG+AGG	+	chr5_4:4420272-4420291	None:intergenic	35.0%
!	CTACCTTCTTTTGTCAGATT+TGG	-	chr5_4:4420447-4420466	Msa0831430:CDS	35.0%
	ATGCCAAATCTGACAAAAGA+AGG	+	chr5_4:4420453-4420472	None:intergenic	35.0%
!	TTTTGTCAGATTTGGCATGT+TGG	-	chr5_4:4420455-4420474	Msa0831430:CDS	35.0%
	ACACCACAAATTCGAAGTAA+TGG	-	chr5_4:4420654-4420673	Msa0831430:CDS	35.0%
	TGCAAATTGCAGGATTTGAT+GGG	-	chr5_4:4420923-4420942	Msa0831430:intron	35.0%
	CATTCTGCATATTCTGCAAA+AGG	+	chr5_4:4421123-4421142	None:intergenic	35.0%
	TTTGCAGAATATGCAGAATG+TGG	-	chr5_4:4421123-4421142	Msa0831430:CDS	35.0%
	GTCAATGCCCTCAATAAATA+TGG	-	chr5_4:4421180-4421199	Msa0831430:CDS	35.0%
	GAACCAAGAATGAAAACTGT+TGG	-	chr5_4:4421225-4421244	Msa0831430:intron	35.0%
!	TCACCAACAGTTTTCATTCT+TGG	+	chr5_4:4421231-4421250	None:intergenic	35.0%
	TCCTCTGAACAAGTATAACA+GGG	-	chr5_4:4421437-4421456	Msa0831430:CDS	35.0%
	TACATTTCTGATCCAGTTCT+AGG	-	chr5_4:4421468-4421487	Msa0831430:CDS	35.0%
	TAGTCAGTATAACCTAGAAC+TGG	+	chr5_4:4421483-4421502	None:intergenic	35.0%
	CCAGTTTCTTCATTCAAGAA+AGG	+	chr5_4:4421508-4421527	None:intergenic	35.0%
	CCTTTCTTGAATGAAGAAAC+TGG	-	chr5_4:4421505-4421524	Msa0831430:CDS	35.0%
	TTAGTAAGAGTAAGCTTGAG+AGG	+	chr5_4:4421652-4421671	None:intergenic	35.0%
	GCTTACTCTTACTAACTCTT+TGG	-	chr5_4:4421657-4421676	Msa0831430:intron	35.0%
!	CACACATTTTGTAAATGGTC+AGG	-	chr5_4:4421688-4421707	Msa0831430:intron	35.0%
	ATCACGCAATCAAGTGAAAA+TGG	-	chr5_4:4420039-4420058	Msa0831430:three_prime_UTR	35.0%
!	TCGAATTTGCCCATTTTGTA+AGG	+	chr5_4:4420103-4420122	None:intergenic	35.0%
	GCAAATTCGATCTATCTCAT+AGG	-	chr5_4:4420113-4420132	Msa0831430:three_prime_UTR	35.0%
	GAATAATAGAGGATAGCATG+AGG	+	chr5_4:4420272-4420291	None:intergenic	35.0%
!	CTACCTTCTTTTGTCAGATT+TGG	-	chr5_4:4420447-4420466	Msa0831430:CDS	35.0%
	ATGCCAAATCTGACAAAAGA+AGG	+	chr5_4:4420453-4420472	None:intergenic	35.0%
!	TTTTGTCAGATTTGGCATGT+TGG	-	chr5_4:4420455-4420474	Msa0831430:CDS	35.0%
	ACACCACAAATTCGAAGTAA+TGG	-	chr5_4:4420654-4420673	Msa0831430:CDS	35.0%
	TGCAAATTGCAGGATTTGAT+GGG	-	chr5_4:4420923-4420942	Msa0831430:intron	35.0%
	CATTCTGCATATTCTGCAAA+AGG	+	chr5_4:4421123-4421142	None:intergenic	35.0%
	TTTGCAGAATATGCAGAATG+TGG	-	chr5_4:4421123-4421142	Msa0831430:CDS	35.0%
	GTCAATGCCCTCAATAAATA+TGG	-	chr5_4:4421180-4421199	Msa0831430:CDS	35.0%
	GAACCAAGAATGAAAACTGT+TGG	-	chr5_4:4421225-4421244	Msa0831430:intron	35.0%
!	TCACCAACAGTTTTCATTCT+TGG	+	chr5_4:4421231-4421250	None:intergenic	35.0%
	TCCTCTGAACAAGTATAACA+GGG	-	chr5_4:4421437-4421456	Msa0831430:CDS	35.0%
	TACATTTCTGATCCAGTTCT+AGG	-	chr5_4:4421468-4421487	Msa0831430:CDS	35.0%
	TAGTCAGTATAACCTAGAAC+TGG	+	chr5_4:4421483-4421502	None:intergenic	35.0%
	CCAGTTTCTTCATTCAAGAA+AGG	+	chr5_4:4421508-4421527	None:intergenic	35.0%
	CCTTTCTTGAATGAAGAAAC+TGG	-	chr5_4:4421505-4421524	Msa0831430:CDS	35.0%
	TTAGTAAGAGTAAGCTTGAG+AGG	+	chr5_4:4421652-4421671	None:intergenic	35.0%
	GCTTACTCTTACTAACTCTT+TGG	-	chr5_4:4421657-4421676	Msa0831430:intron	35.0%
!	CACACATTTTGTAAATGGTC+AGG	-	chr5_4:4421688-4421707	Msa0831430:intron	35.0%
	GTAAGGAGTAAGAAGAGGAA+TGG	+	chr5_4:4420086-4420105	None:intergenic	40.0%
	TAGGATCTTTGTCTTGTGAG+TGG	+	chr5_4:4420233-4420252	None:intergenic	40.0%
	CTCACAAGACAAAGATCCTA+TGG	-	chr5_4:4420233-4420252	Msa0831430:three_prime_UTR	40.0%
	TGGCTCTCTGTGAATAATAG+AGG	+	chr5_4:4420283-4420302	None:intergenic	40.0%
	TATTATTCACAGAGAGCCAC+CGG	-	chr5_4:4420284-4420303	Msa0831430:three_prime_UTR	40.0%
	TGCTCTTTAGTCCATATACC+TGG	+	chr5_4:4420380-4420399	None:intergenic	40.0%
	GTTGGAAGAGTTTCTGATTC+TGG	-	chr5_4:4420473-4420492	Msa0831430:CDS	40.0%
	TCAACAGTTTATCAGCCGAA+TGG	-	chr5_4:4420597-4420616	Msa0831430:CDS	40.0%
	TTGCAAAATTCACACCACCA+AGG	-	chr5_4:4420685-4420704	Msa0831430:CDS	40.0%
!	ACTTGCTGCTAGAAATGCTA+TGG	-	chr5_4:4420752-4420771	Msa0831430:CDS	40.0%
	GTGCAAATTGCAGGATTTGA+TGG	-	chr5_4:4420922-4420941	Msa0831430:intron	40.0%
	GCAAATTGCAGGATTTGATG+GGG	-	chr5_4:4420924-4420943	Msa0831430:intron	40.0%
	TTTGATGGGGTTGAAATCCA+TGG	-	chr5_4:4420937-4420956	Msa0831430:intron	40.0%
	TTGATGGGGTTGAAATCCAT+GGG	-	chr5_4:4420938-4420957	Msa0831430:intron	40.0%
	GACAGAACAGATGAATATGG+TGG	-	chr5_4:4421006-4421025	Msa0831430:intron	40.0%
	GAAGCTGTTGCAAATGAGAT+AGG	-	chr5_4:4421069-4421088	Msa0831430:CDS	40.0%
	GAGATAGGAGCTGATAAAGT+TGG	-	chr5_4:4421084-4421103	Msa0831430:CDS	40.0%
!!	AACCATGAAAGTGCCTTTGA+AGG	+	chr5_4:4421295-4421314	None:intergenic	40.0%
	TCAATGCCATAGCTGAAAAC+AGG	-	chr5_4:4421343-4421362	Msa0831430:intron	40.0%
	CAATGCCATAGCTGAAAACA+GGG	-	chr5_4:4421344-4421363	Msa0831430:CDS	40.0%
	ACAAACGACCATAGACAACA+AGG	+	chr5_4:4421374-4421393	None:intergenic	40.0%
	GCAAATCTCTTTGGCAAATC+TGG	+	chr5_4:4421408-4421427	None:intergenic	40.0%
	GCATCAAGTGCAAATCTCTT+TGG	+	chr5_4:4421417-4421436	None:intergenic	40.0%
	CTCCTCTGAACAAGTATAAC+AGG	-	chr5_4:4421436-4421455	Msa0831430:CDS	40.0%
	TCCCTGTTATACTTGTTCAG+AGG	+	chr5_4:4421441-4421460	None:intergenic	40.0%
	TAGCAGAAAGCAATCTGCAA+GGG	+	chr5_4:4421579-4421598	None:intergenic	40.0%
	ATAGCAGAAAGCAATCTGCA+AGG	+	chr5_4:4421580-4421599	None:intergenic	40.0%
	GTAAGGAGTAAGAAGAGGAA+TGG	+	chr5_4:4420086-4420105	None:intergenic	40.0%
	TAGGATCTTTGTCTTGTGAG+TGG	+	chr5_4:4420233-4420252	None:intergenic	40.0%
	CTCACAAGACAAAGATCCTA+TGG	-	chr5_4:4420233-4420252	Msa0831430:three_prime_UTR	40.0%
	TGGCTCTCTGTGAATAATAG+AGG	+	chr5_4:4420283-4420302	None:intergenic	40.0%
	TATTATTCACAGAGAGCCAC+CGG	-	chr5_4:4420284-4420303	Msa0831430:three_prime_UTR	40.0%
	TGCTCTTTAGTCCATATACC+TGG	+	chr5_4:4420380-4420399	None:intergenic	40.0%
	GTTGGAAGAGTTTCTGATTC+TGG	-	chr5_4:4420473-4420492	Msa0831430:CDS	40.0%
	TCAACAGTTTATCAGCCGAA+TGG	-	chr5_4:4420597-4420616	Msa0831430:CDS	40.0%
	TTGCAAAATTCACACCACCA+AGG	-	chr5_4:4420685-4420704	Msa0831430:CDS	40.0%
!	ACTTGCTGCTAGAAATGCTA+TGG	-	chr5_4:4420752-4420771	Msa0831430:CDS	40.0%
	GTGCAAATTGCAGGATTTGA+TGG	-	chr5_4:4420922-4420941	Msa0831430:intron	40.0%
	GCAAATTGCAGGATTTGATG+GGG	-	chr5_4:4420924-4420943	Msa0831430:intron	40.0%
	TTTGATGGGGTTGAAATCCA+TGG	-	chr5_4:4420937-4420956	Msa0831430:intron	40.0%
	TTGATGGGGTTGAAATCCAT+GGG	-	chr5_4:4420938-4420957	Msa0831430:intron	40.0%
	GACAGAACAGATGAATATGG+TGG	-	chr5_4:4421006-4421025	Msa0831430:intron	40.0%
	GAAGCTGTTGCAAATGAGAT+AGG	-	chr5_4:4421069-4421088	Msa0831430:CDS	40.0%
	GAGATAGGAGCTGATAAAGT+TGG	-	chr5_4:4421084-4421103	Msa0831430:CDS	40.0%
!!	AACCATGAAAGTGCCTTTGA+AGG	+	chr5_4:4421295-4421314	None:intergenic	40.0%
	TCAATGCCATAGCTGAAAAC+AGG	-	chr5_4:4421343-4421362	Msa0831430:intron	40.0%
	CAATGCCATAGCTGAAAACA+GGG	-	chr5_4:4421344-4421363	Msa0831430:CDS	40.0%
	ACAAACGACCATAGACAACA+AGG	+	chr5_4:4421374-4421393	None:intergenic	40.0%
	GCAAATCTCTTTGGCAAATC+TGG	+	chr5_4:4421408-4421427	None:intergenic	40.0%
	GCATCAAGTGCAAATCTCTT+TGG	+	chr5_4:4421417-4421436	None:intergenic	40.0%
	CTCCTCTGAACAAGTATAAC+AGG	-	chr5_4:4421436-4421455	Msa0831430:CDS	40.0%
	TCCCTGTTATACTTGTTCAG+AGG	+	chr5_4:4421441-4421460	None:intergenic	40.0%
	TAGCAGAAAGCAATCTGCAA+GGG	+	chr5_4:4421579-4421598	None:intergenic	40.0%
	ATAGCAGAAAGCAATCTGCA+AGG	+	chr5_4:4421580-4421599	None:intergenic	40.0%
	CGCAATCAAGTGAAAATGGC+TGG	-	chr5_4:4420043-4420062	Msa0831430:three_prime_UTR	45.0%
	TAGAGGATAGCATGAGGTTG+TGG	+	chr5_4:4420266-4420285	None:intergenic	45.0%
	CTTCTCATAACCGAAGCTAC+CGG	-	chr5_4:4420320-4420339	Msa0831430:CDS	45.0%
	GCATGAACAGCATCCACAAT+GGG	+	chr5_4:4420419-4420438	None:intergenic	45.0%
	AGCATGAACAGCATCCACAA+TGG	+	chr5_4:4420420-4420439	None:intergenic	45.0%
	GTGGATGCTGTTCATGCTAA+AGG	-	chr5_4:4420422-4420441	Msa0831430:CDS	45.0%
	AGTTTATCAGCCGAATGGAC+AGG	-	chr5_4:4420602-4420621	Msa0831430:CDS	45.0%
!	GATATTGGTGCCTGTCCATT+CGG	+	chr5_4:4420615-4420634	None:intergenic	45.0%
	CAAAATTCACACCACCAAGG+CGG	-	chr5_4:4420688-4420707	Msa0831430:CDS	45.0%
	GCTAGAAATGCTATGGAAGC+TGG	-	chr5_4:4420759-4420778	Msa0831430:CDS	45.0%
!!	TTGTTGCTTCAAAGGGCACT+AGG	-	chr5_4:4420867-4420886	Msa0831430:CDS	45.0%
	CTAACTGTGGTGCAAATTGC+AGG	-	chr5_4:4420913-4420932	Msa0831430:intron	45.0%
	TGATGGGGTTGAAATCCATG+GGG	-	chr5_4:4420939-4420958	Msa0831430:intron	45.0%
	AAACCGACAACGGTTCTCAA+GGG	+	chr5_4:4421034-4421053	None:intergenic	45.0%
	CTTCCAAAGCAAACCGACAA+CGG	+	chr5_4:4421044-4421063	None:intergenic	45.0%
	AGACTCCAACCCTAACGAAT+TGG	-	chr5_4:4421146-4421165	Msa0831430:CDS	45.0%
	GACTCCAACCCTAACGAATT+GGG	-	chr5_4:4421147-4421166	Msa0831430:CDS	45.0%
	AAGTCCCAATTCGTTAGGGT+TGG	+	chr5_4:4421154-4421173	None:intergenic	45.0%
!	CCTTTGAAGGCCTTTCTCAT+CGG	+	chr5_4:4421282-4421301	None:intergenic	45.0%
!!	AAAGGCACTTTCATGGTTGC+AGG	-	chr5_4:4421297-4421316	Msa0831430:intron	45.0%
!!	TGGCATTGATCCCATCATGT+CGG	+	chr5_4:4421332-4421351	None:intergenic	45.0%
	TAGTGAGGAGATTCCACACT+TGG	+	chr5_4:4421542-4421561	None:intergenic	45.0%
	CGCAATCAAGTGAAAATGGC+TGG	-	chr5_4:4420043-4420062	Msa0831430:three_prime_UTR	45.0%
	TAGAGGATAGCATGAGGTTG+TGG	+	chr5_4:4420266-4420285	None:intergenic	45.0%
	CTTCTCATAACCGAAGCTAC+CGG	-	chr5_4:4420320-4420339	Msa0831430:CDS	45.0%
	GCATGAACAGCATCCACAAT+GGG	+	chr5_4:4420419-4420438	None:intergenic	45.0%
	AGCATGAACAGCATCCACAA+TGG	+	chr5_4:4420420-4420439	None:intergenic	45.0%
	GTGGATGCTGTTCATGCTAA+AGG	-	chr5_4:4420422-4420441	Msa0831430:CDS	45.0%
	AGTTTATCAGCCGAATGGAC+AGG	-	chr5_4:4420602-4420621	Msa0831430:CDS	45.0%
!	GATATTGGTGCCTGTCCATT+CGG	+	chr5_4:4420615-4420634	None:intergenic	45.0%
	CAAAATTCACACCACCAAGG+CGG	-	chr5_4:4420688-4420707	Msa0831430:CDS	45.0%
	GCTAGAAATGCTATGGAAGC+TGG	-	chr5_4:4420759-4420778	Msa0831430:CDS	45.0%
!!	TTGTTGCTTCAAAGGGCACT+AGG	-	chr5_4:4420867-4420886	Msa0831430:CDS	45.0%
	CTAACTGTGGTGCAAATTGC+AGG	-	chr5_4:4420913-4420932	Msa0831430:intron	45.0%
	TGATGGGGTTGAAATCCATG+GGG	-	chr5_4:4420939-4420958	Msa0831430:intron	45.0%
	AAACCGACAACGGTTCTCAA+GGG	+	chr5_4:4421034-4421053	None:intergenic	45.0%
	CTTCCAAAGCAAACCGACAA+CGG	+	chr5_4:4421044-4421063	None:intergenic	45.0%
	AGACTCCAACCCTAACGAAT+TGG	-	chr5_4:4421146-4421165	Msa0831430:CDS	45.0%
	GACTCCAACCCTAACGAATT+GGG	-	chr5_4:4421147-4421166	Msa0831430:CDS	45.0%
	AAGTCCCAATTCGTTAGGGT+TGG	+	chr5_4:4421154-4421173	None:intergenic	45.0%
!	CCTTTGAAGGCCTTTCTCAT+CGG	+	chr5_4:4421282-4421301	None:intergenic	45.0%
!!	AAAGGCACTTTCATGGTTGC+AGG	-	chr5_4:4421297-4421316	Msa0831430:intron	45.0%
!!	TGGCATTGATCCCATCATGT+CGG	+	chr5_4:4421332-4421351	None:intergenic	45.0%
	TAGTGAGGAGATTCCACACT+TGG	+	chr5_4:4421542-4421561	None:intergenic	45.0%
	AGGTTGTGGAACGTTGCCAT+AGG	+	chr5_4:4420252-4420271	None:intergenic	50.0%
	ATCCAGACACGCCAGGTATA+TGG	-	chr5_4:4420366-4420385	Msa0831430:CDS	50.0%
!	ATGGACTAAAGAGCACGTCG+AGG	-	chr5_4:4420385-4420404	Msa0831430:CDS	50.0%
	GTTGAAATCCATGGGGCTCA+TGG	-	chr5_4:4420946-4420965	Msa0831430:intron	50.0%
	GATCCCTTGAGAACCGTTGT+CGG	-	chr5_4:4421028-4421047	Msa0831430:intron	50.0%
	CAAACCGACAACGGTTCTCA+AGG	+	chr5_4:4421035-4421054	None:intergenic	50.0%
!!	GAACCGTTGTCGGTTTGCTT+TGG	-	chr5_4:4421038-4421057	Msa0831430:intron	50.0%
	CCGATGAGAAAGGCCTTCAA+AGG	-	chr5_4:4421279-4421298	Msa0831430:intron	50.0%
!!	GGCCTTCAAAGGCACTTTCA+TGG	-	chr5_4:4421290-4421309	Msa0831430:intron	50.0%
	GAGGTTACGACCGACATGAT+GGG	-	chr5_4:4421319-4421338	Msa0831430:intron	50.0%
!	GTCTGCCCTGTTTTCAGCTA+TGG	+	chr5_4:4421352-4421371	None:intergenic	50.0%
!	AGGGCAGACCTTGTTGTCTA+TGG	-	chr5_4:4421363-4421382	Msa0831430:CDS	50.0%
	AGGTTGTGGAACGTTGCCAT+AGG	+	chr5_4:4420252-4420271	None:intergenic	50.0%
	ATCCAGACACGCCAGGTATA+TGG	-	chr5_4:4420366-4420385	Msa0831430:CDS	50.0%
!	ATGGACTAAAGAGCACGTCG+AGG	-	chr5_4:4420385-4420404	Msa0831430:CDS	50.0%
	GTTGAAATCCATGGGGCTCA+TGG	-	chr5_4:4420946-4420965	Msa0831430:intron	50.0%
	GATCCCTTGAGAACCGTTGT+CGG	-	chr5_4:4421028-4421047	Msa0831430:intron	50.0%
	CAAACCGACAACGGTTCTCA+AGG	+	chr5_4:4421035-4421054	None:intergenic	50.0%
!!	GAACCGTTGTCGGTTTGCTT+TGG	-	chr5_4:4421038-4421057	Msa0831430:intron	50.0%
	CCGATGAGAAAGGCCTTCAA+AGG	-	chr5_4:4421279-4421298	Msa0831430:intron	50.0%
!!	GGCCTTCAAAGGCACTTTCA+TGG	-	chr5_4:4421290-4421309	Msa0831430:intron	50.0%
	GAGGTTACGACCGACATGAT+GGG	-	chr5_4:4421319-4421338	Msa0831430:intron	50.0%
!	GTCTGCCCTGTTTTCAGCTA+TGG	+	chr5_4:4421352-4421371	None:intergenic	50.0%
!	AGGGCAGACCTTGTTGTCTA+TGG	-	chr5_4:4421363-4421382	Msa0831430:CDS	50.0%
	GAGAAGACCTCCGTTAGAGC+CGG	+	chr5_4:4420306-4420325	None:intergenic	55.0%
	GTCAGAGACACCGGTAGCTT+CGG	+	chr5_4:4420333-4420352	None:intergenic	55.0%
!	TTGAGCGGTGTCAGAGACAC+CGG	+	chr5_4:4420342-4420361	None:intergenic	55.0%
	GTGTCTCTGACACCGCTCAA+GGG	-	chr5_4:4420342-4420361	Msa0831430:CDS	55.0%
	CGTGTCTGGATACCCTTGAG+CGG	+	chr5_4:4420357-4420376	None:intergenic	55.0%
	GTCCATATACCTGGCGTGTC+TGG	+	chr5_4:4420371-4420390	None:intergenic	55.0%
!	CTAAAGAGCACGTCGAGGCT+TGG	-	chr5_4:4420390-4420409	Msa0831430:CDS	55.0%
	CGAGGCTTGGAAACCCATTG+TGG	-	chr5_4:4420403-4420422	Msa0831430:CDS	55.0%
	TCATCTGTCCTTAGCCGCCT+TGG	+	chr5_4:4420705-4420724	None:intergenic	55.0%
	TCTCATCGGCACAAGGCTGT+CGG	+	chr5_4:4421268-4421287	None:intergenic	55.0%
!	CAGCCTTGTGCCGATGAGAA+AGG	-	chr5_4:4421269-4421288	Msa0831430:intron	55.0%
	AGGCCTTTCTCATCGGCACA+AGG	+	chr5_4:4421275-4421294	None:intergenic	55.0%
	GGCACTTTCATGGTTGCAGG+AGG	-	chr5_4:4421300-4421319	Msa0831430:intron	55.0%
	GGAGGTTACGACCGACATGA+TGG	-	chr5_4:4421318-4421337	Msa0831430:intron	55.0%
!	GGTGCTGTAGCATCCAAGTG+TGG	-	chr5_4:4421526-4421545	Msa0831430:CDS	55.0%
	GAGAAGACCTCCGTTAGAGC+CGG	+	chr5_4:4420306-4420325	None:intergenic	55.0%
	GTCAGAGACACCGGTAGCTT+CGG	+	chr5_4:4420333-4420352	None:intergenic	55.0%
!	TTGAGCGGTGTCAGAGACAC+CGG	+	chr5_4:4420342-4420361	None:intergenic	55.0%
	GTGTCTCTGACACCGCTCAA+GGG	-	chr5_4:4420342-4420361	Msa0831430:CDS	55.0%
	CGTGTCTGGATACCCTTGAG+CGG	+	chr5_4:4420357-4420376	None:intergenic	55.0%
	GTCCATATACCTGGCGTGTC+TGG	+	chr5_4:4420371-4420390	None:intergenic	55.0%
!	CTAAAGAGCACGTCGAGGCT+TGG	-	chr5_4:4420390-4420409	Msa0831430:CDS	55.0%
	CGAGGCTTGGAAACCCATTG+TGG	-	chr5_4:4420403-4420422	Msa0831430:CDS	55.0%
	TCATCTGTCCTTAGCCGCCT+TGG	+	chr5_4:4420705-4420724	None:intergenic	55.0%
	TCTCATCGGCACAAGGCTGT+CGG	+	chr5_4:4421268-4421287	None:intergenic	55.0%
!	CAGCCTTGTGCCGATGAGAA+AGG	-	chr5_4:4421269-4421288	Msa0831430:intron	55.0%
	AGGCCTTTCTCATCGGCACA+AGG	+	chr5_4:4421275-4421294	None:intergenic	55.0%
	GGCACTTTCATGGTTGCAGG+AGG	-	chr5_4:4421300-4421319	Msa0831430:intron	55.0%
	GGAGGTTACGACCGACATGA+TGG	-	chr5_4:4421318-4421337	Msa0831430:intron	55.0%
!	GGTGCTGTAGCATCCAAGTG+TGG	-	chr5_4:4421526-4421545	Msa0831430:CDS	55.0%
!!	CAGAGAGCCACCGGCTCTAA+CGG	-	chr5_4:4420293-4420312	Msa0831430:three_prime_UTR	60.0%
	AAGACCTCCGTTAGAGCCGG+TGG	+	chr5_4:4420303-4420322	None:intergenic	60.0%
	GGTGTCTCTGACACCGCTCA+AGG	-	chr5_4:4420341-4420360	Msa0831430:CDS	60.0%
!!	CAAGGGTATCCAGACACGCC+AGG	-	chr5_4:4420359-4420378	Msa0831430:CDS	60.0%
	TCACACCACCAAGGCGGCTA+AGG	-	chr5_4:4420694-4420713	Msa0831430:CDS	60.0%
	TCTGTCCTTAGCCGCCTTGG+TGG	+	chr5_4:4420702-4420721	None:intergenic	60.0%
	GTAGGTAGCCATGAGCCCCA+TGG	+	chr5_4:4420957-4420976	None:intergenic	60.0%
	TCATCGGCACAAGGCTGTCG+GGG	+	chr5_4:4421266-4421285	None:intergenic	60.0%
	CTCATCGGCACAAGGCTGTC+GGG	+	chr5_4:4421267-4421286	None:intergenic	60.0%
!!	CAGAGAGCCACCGGCTCTAA+CGG	-	chr5_4:4420293-4420312	Msa0831430:three_prime_UTR	60.0%
	AAGACCTCCGTTAGAGCCGG+TGG	+	chr5_4:4420303-4420322	None:intergenic	60.0%
	GGTGTCTCTGACACCGCTCA+AGG	-	chr5_4:4420341-4420360	Msa0831430:CDS	60.0%
!!	CAAGGGTATCCAGACACGCC+AGG	-	chr5_4:4420359-4420378	Msa0831430:CDS	60.0%
	TCACACCACCAAGGCGGCTA+AGG	-	chr5_4:4420694-4420713	Msa0831430:CDS	60.0%
	TCTGTCCTTAGCCGCCTTGG+TGG	+	chr5_4:4420702-4420721	None:intergenic	60.0%
	GTAGGTAGCCATGAGCCCCA+TGG	+	chr5_4:4420957-4420976	None:intergenic	60.0%
	TCATCGGCACAAGGCTGTCG+GGG	+	chr5_4:4421266-4421285	None:intergenic	60.0%
	CTCATCGGCACAAGGCTGTC+GGG	+	chr5_4:4421267-4421286	None:intergenic	60.0%
!!	AGAGCCACCGGCTCTAACGG+AGG	-	chr5_4:4420296-4420315	Msa0831430:three_prime_UTR	65.0%
!!	AGAGCCACCGGCTCTAACGG+AGG	-	chr5_4:4420296-4420315	Msa0831430:three_prime_UTR	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	4419958	4421880	4419958	ID=Msa0831430;Name=Msa0831430
chr5_4	mRNA	4419958	4421880	4419958	ID=Msa0831430-mRNA-1;Parent=Msa0831430;Name=Msa0831430-mRNA-1;_AED=0.14;_eAED=0.14;_QI=100\|1\|1\|1\|1\|1\|4\|362\|371
chr5_4	exon	4419958	4420903	4419958	ID=Msa0831430-mRNA-1:exon:1823;Parent=Msa0831430-mRNA-1
chr5_4	exon	4421058	4421234	4421058	ID=Msa0831430-mRNA-1:exon:1822;Parent=Msa0831430-mRNA-1
chr5_4	exon	4421344	4421621	4421344	ID=Msa0831430-mRNA-1:exon:1821;Parent=Msa0831430-mRNA-1
chr5_4	exon	4421704	4421880	4421704	ID=Msa0831430-mRNA-1:exon:1820;Parent=Msa0831430-mRNA-1
chr5_4	five_prime_UTR	4421781	4421880	4421781	ID=Msa0831430-mRNA-1:five_prime_utr;Parent=Msa0831430-mRNA-1
chr5_4	CDS	4421704	4421780	4421704	ID=Msa0831430-mRNA-1:cds;Parent=Msa0831430-mRNA-1
chr5_4	CDS	4421344	4421621	4421344	ID=Msa0831430-mRNA-1:cds;Parent=Msa0831430-mRNA-1
chr5_4	CDS	4421058	4421234	4421058	ID=Msa0831430-mRNA-1:cds;Parent=Msa0831430-mRNA-1
chr5_4	CDS	4420320	4420903	4420320	ID=Msa0831430-mRNA-1:cds;Parent=Msa0831430-mRNA-1
chr5_4	three_prime_UTR	4419958	4420319	4419958	ID=Msa0831430-mRNA-1:three_prime_utr;Parent=Msa0831430-mRNA-1

Gene Sequence

>Msa0831430

ATGGCTGGTATTGTTGAATCTGATACCATTCCTCTTCTTACTCCTTACAAAATGGGCAAATTCGATCTATCTCATAGAGTTGTTTTGGCACCACTCACAAGACAAAGATCCTATGGCAACGTTCCACAACCTCATGCTATCCTCTATTATTCACAGAGAGCCACCGGCTCTAACGGAGGTCTTCTCATAACCGAAGCTACCGGTGTCTCTGACACCGCTCAAGGGTATCCAGACACGCCAGGTATATGGACTAAAGAGCACGTCGAGGCTTGGAAACCCATTGTGGATGCTGTTCATGCTAAAGGTGCTACCTTCTTTTGTCAGATTTGGCATGTTGGAAGAGTTTCTGATTCTGTTTATCAGCCGAATGGACAGGCACCAATATCATCTACAGATAAGTCACTCACACCACAAATTCGAAGTAATGGTTTTAATATTGCAAAATTCACACCACCAAGGCGGCTAAGGACAGATGAAATTTCGAACATTGTCAATGACTTCAGACTTGCTGCTAGAAATGCTATGGAAGCTGGATTTGATGGGGTTGAAATCCATGGGGCTCATGGCTACCTACTTGAACAATTCATGAAAGATAAAGTGAATGACAGAACAGATGAATATGGTGGATCCCTTGAGAACCGTTGTCGGTTTGCTTTGGAAGTTGTTGAAGCTGTTGCAAATGAGATAGGAGCTGATAAAGTTGGAATTAGACTATCACCTTTTGCAGAATATGCAGAATGTGGAGACTCCAACCCTAACGAATTGGGACTTTATATGGTCAATGCCCTCAATAAATATGGTATTCTTTACTGTCATATGGTGGAACCAAGAATGAAAACTGTTGGTGAAAAAACTGAAAGCCCCGACAGCCTTGTGCCGATGAGAAAGGCCTTCAAAGGCACTTTCATGGTTGCAGGAGGTTACGACCGACATGATGGGATCAATGCCATAGCTGAAAACAGGGCAGACCTTGTTGTCTATGGTCGTTTGTTCTTAGCTAATCCAGATTTGCCAAAGAGATTTGCACTTGATGCTCCTCTGAACAAGTATAACAGGGAGACGTTCTACATTTCTGATCCAGTTCTAGGTTATACTGACTACCCCTTTCTTGAATGA

Protein sequence

>Msa0831430

MAGIVESDTIPLLTPYKMGKFDLSHRVVLAPLTRQRSYGNVPQPHAILYYSQRATGSNGGLLITEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGATFFCQIWHVGRVSDSVYQPNGQAPISSTDKSLTPQIRSNGFNIAKFTPPRRLRTDEISNIVNDFRLAARNAMEAGFDGVEIHGAHGYLLEQFMKDKVNDRTDEYGGSLENRCRFALEVVEAVANEIGADKVGIRLSPFAEYAECGDSNPNELGLYMVNALNKYGILYCHMVEPRMKTVGEKTESPDSLVPMRKAFKGTFMVAGGYDRHDGINAIAENRADLVVYGRLFLANPDLPKRFALDAPLNKYNRETFYISDPVLGYTDYPFLE*