Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295580 | AAO72632.1 | 73.684 | 57 | 13 | 1 | 104 | 158 | 18 | 74 | 5.73e-20 | 89.0 |
| Msa0295580 | AAO72632.1 | 83.582 | 67 | 11 | 0 | 1 | 67 | 1 | 67 | 6.79e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295580 | sp|P18646|DEF_VIGUN | 70.588 | 68 | 19 | 1 | 1 | 67 | 1 | 68 | 6.22e-28 | 102 |
| Msa0295580 | sp|P18646|DEF_VIGUN | 62.069 | 58 | 19 | 2 | 104 | 158 | 18 | 75 | 4.83e-18 | 76.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0132620 | Msa0295580 | 0.800113 | 1.678035e-48 | -8.615850e-47 |
| Msa0216210 | Msa0295580 | 0.820704 | 5.960201e-53 | -8.615850e-47 |
| Msa0223100 | Msa0295580 | 0.800556 | 1.363741e-48 | -8.615850e-47 |
| Msa0260180 | Msa0295580 | 0.940749 | 1.370102e-100 | -8.615850e-47 |
| Msa0282170 | Msa0295580 | 0.818603 | 1.798032e-52 | -8.615850e-47 |
| Msa0295580 | Msa0426810 | 0.816525 | 5.288764e-52 | -8.615850e-47 |
| Msa0295580 | Msa0576600 | 0.814722 | 1.333115e-51 | -8.615850e-47 |
| Msa0295580 | Msa0579340 | 0.830406 | 2.990259e-55 | -8.615850e-47 |
| Msa0295580 | Msa0617830 | 0.808466 | 3.055130e-50 | -8.615850e-47 |
| Msa0295580 | Msa0622340 | 0.832860 | 7.427173e-56 | -8.615850e-47 |
| Msa0295580 | Msa0650650 | 0.823094 | 1.666463e-53 | -8.615850e-47 |
| Msa0295580 | Msa0650740 | 0.832823 | 7.587205e-56 | -8.615850e-47 |
| Msa0295580 | Msa0738850 | 0.810618 | 1.053935e-50 | -8.615850e-47 |
| Msa0295580 | Msa0738860 | 0.850352 | 1.795359e-60 | -8.615850e-47 |
| Msa0295580 | Msa0738870 | 0.860864 | 1.533838e-63 | -8.615850e-47 |
| Msa0295580 | Msa0738880 | 0.806078 | 9.794703e-50 | -8.615850e-47 |
| Msa0295580 | Msa0738890 | 0.810373 | 1.190737e-50 | -8.615850e-47 |
| Msa0295580 | Msa0738900 | 0.824830 | 6.523981e-54 | -8.615850e-47 |
| Msa0295580 | Msa0783270 | 0.861744 | 8.271379e-64 | -8.615850e-47 |
| Msa0295580 | Msa0819320 | 0.806644 | 7.442167e-50 | -8.615850e-47 |
| Msa0295580 | Msa0819330 | 0.813098 | 3.039220e-51 | -8.615850e-47 |
| Msa0295580 | Msa0819360 | 0.841723 | 3.996102e-58 | -8.615850e-47 |
| Msa0295580 | Msa0819370 | 0.808649 | 2.792498e-50 | -8.615850e-47 |
| Msa0295580 | Msa0819380 | 0.813218 | 2.860323e-51 | -8.615850e-47 |
| Msa0295580 | Msa0819390 | 0.827920 | 1.198323e-54 | -8.615850e-47 |
| Msa0295580 | Msa0859490 | 0.807826 | 4.180732e-50 | -8.615850e-47 |
| Msa0295580 | Msa0859500 | 0.827499 | 1.513020e-54 | -8.615850e-47 |
| Msa0295580 | Msa0859520 | 0.822995 | 1.757888e-53 | -8.615850e-47 |
| Msa0295580 | Msa0859530 | 0.840749 | 7.207102e-58 | -8.615850e-47 |
| Msa0295580 | Msa0877420 | 0.816418 | 5.586573e-52 | -8.615850e-47 |
| Msa0295580 | Msa0955310 | 0.809346 | 1.980448e-50 | -8.615850e-47 |
| Msa0295580 | Msa1218650 | 0.836974 | 6.831330e-57 | -8.615850e-47 |
| Msa0295580 | Msa1306200 | 0.809314 | 2.012177e-50 | -8.615850e-47 |
| Msa0295580 | Msa1419110 | 0.824346 | 8.485689e-54 | -8.615850e-47 |
| Msa0295580 | Msa1439230 | 0.829543 | 4.854866e-55 | -8.615850e-47 |
| Msa0295580 | Msa1450020 | 0.811577 | 6.532074e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295580 | MtrunA17_Chr2g0317751 | 90.909 | 55 | 5 | 0 | 104 | 158 | 18 | 72 | 6.44e-32 | 108 |
| Msa0295580 | MtrunA17_Chr2g0317751 | 77.612 | 67 | 13 | 1 | 1 | 67 | 1 | 65 | 4.88e-30 | 104 |
| Msa0295580 | MtrunA17_Chr2g0317741 | 89.744 | 39 | 4 | 0 | 67 | 105 | 20 | 58 | 1.26e-19 | 77.8 |
| Msa0295580 | MtrunA17_Chr2g0317741 | 67.188 | 64 | 21 | 0 | 1 | 64 | 1 | 64 | 6.04e-18 | 73.6 |
| Msa0295580 | MtrunA17_Chr2g0317741 | 58.182 | 55 | 20 | 2 | 106 | 158 | 20 | 73 | 8.27e-15 | 65.5 |
| Msa0295580 | MtrunA17_Chr8g0337781 | 43.284 | 67 | 34 | 2 | 1 | 64 | 1 | 66 | 5.23e-11 | 55.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 47 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAAACACTTGTGAGAATT+TGG | 0.253219 | 2_3:+48194317 | Msa0295580:CDS |
| AGCCAGAACTTGTGAGAATT+TGG | 0.273869 | 2_3:+48203867 | Msa0295580:CDS |
| GTGTACTAAAAGATGTTAAA+TGG | 0.300220 | 2_3:+48203990 | Msa0295580:exon |
| GCCACTAACTGCGTTCTCTT+TGG | 0.307608 | 2_3:-48203941 | None:intergenic |
| AGAATTTGGCTGGTACATTC+AGG | 0.308301 | 2_3:+48194331 | Msa0295580:CDS |
| GCCACTAACCAAATGCTCTT+TGG | 0.320157 | 2_3:-48194397 | None:intergenic |
| AGAATTTGGCTGATAAATAT+AGG | 0.322416 | 2_3:+48203881 | Msa0295580:CDS |
| ATAATTTCGTTTCCAACTCT+TGG | 0.339782 | 2_3:+48204189 | Msa0295580:three_prime_UTR |
| CTGCAGAACCAAAGAGCATT+TGG | 0.345511 | 2_3:+48194389 | Msa0295580:CDS |
| TTATGCTCTTCTATATCATA+TGG | 0.363711 | 2_3:+48204151 | Msa0295580:three_prime_UTR |
| AGCCAAATTCTCACAAGTTC+TGG | 0.400133 | 2_3:-48203869 | None:intergenic |
| ACCAAAGAGCATTTGGTTAG+TGG | 0.402586 | 2_3:+48194396 | Msa0295580:CDS |
| AGCAAGGACTTGTGAGCATT+TGG | 0.402994 | 2_3:+48199969 | Msa0295580:CDS |
| GAATTTGGCTGATAAATATA+GGG | 0.415768 | 2_3:+48203882 | Msa0295580:CDS |
| ACATTCAGGGGACCATGTTT+CGG | 0.416979 | 2_3:+48194345 | Msa0295580:CDS |
| TCATATTTATCATTAAGTTA+TGG | 0.428066 | 2_3:+48193565 | Msa0295580:exon |
| TATAGGGGACCATGCTTTAG+TGG | 0.430117 | 2_3:+48203898 | Msa0295580:CDS |
| ATTTGGTTAGTGGCAGGTGC+AGG | 0.436259 | 2_3:+48194406 | Msa0295580:CDS |
| TAATTTCGTTTCCAACTCTT+GGG | 0.444634 | 2_3:+48204190 | Msa0295580:three_prime_UTR |
| CAACAAAGAGAACGAGGAAG+AGG | 0.464218 | 2_3:-48193616 | None:intergenic |
| ACGCAGTTAGTGGCAGGTGC+AGG | 0.464284 | 2_3:+48203950 | Msa0295580:CDS |
| ACCAAAGAGAACGCAGTTAG+TGG | 0.483201 | 2_3:+48203940 | Msa0295580:CDS |
| ATGGAGAAGAAATCATTAGT+TGG | 0.488503 | 2_3:+48193584 | Msa0295580:CDS |
| AACACTTGTGAGAATTTGGC+TGG | 0.492030 | 2_3:+48194321 | Msa0295580:CDS |
| AAGTCTATTCCATGCATTGT+TGG | 0.500596 | 2_3:-48204020 | None:intergenic |
| AAGAGCATTTGGTTAGTGGC+AGG | 0.516258 | 2_3:+48194400 | Msa0295580:CDS |
| CGCAGTTAGTGGCAGGTGCA+GGG | 0.524624 | 2_3:+48203951 | Msa0295580:CDS |
| GCAGGGATGACTTTCGCTGT+TGG | 0.526456 | 2_3:+48203968 | Msa0295580:CDS |
| AATTAGTACTGCCCAAGAGT+TGG | 0.528260 | 2_3:-48204201 | None:intergenic |
| GAATTTGGCTGGTACATTCA+GGG | 0.528597 | 2_3:+48194332 | Msa0295580:CDS |
| GGATCTTCTCCAACAATGCA+TGG | 0.529429 | 2_3:+48204011 | Msa0295580:three_prime_UTR |
| CATTTGGCTGATACATATAG+AGG | 0.536909 | 2_3:+48199985 | Msa0295580:CDS |
| TTAAGTGTTTGTGTCTAGTG+TGG | 0.553780 | 2_3:-48193516 | None:intergenic |
| CAGTTTGAGTTACCGAAACA+TGG | 0.557423 | 2_3:-48194357 | None:intergenic |
| TATTAATGCAGAAGAAATTG+TGG | 0.559230 | 2_3:+48203837 | Msa0295580:intron |
| TTTGGTTAGTGGCAGGTGCA+GGG | 0.565365 | 2_3:+48194407 | Msa0295580:CDS |
| AAGAGAACGCAGTTAGTGGC+AGG | 0.565888 | 2_3:+48203944 | Msa0295580:CDS |
| AATTTGGCTGGTACATTCAG+GGG | 0.590330 | 2_3:+48194333 | Msa0295580:CDS |
| CAGCTAGCATCTGTGAAGCA+TGG | 0.627719 | 2_3:-48200009 | None:intergenic |
| CTTGGATGCAGAAGAAATTG+TGG | 0.636627 | 2_3:+48199939 | Msa0295580:intron |
| AAATTGTGGTGATTGAAGCA+AGG | 0.641556 | 2_3:+48199953 | Msa0295580:CDS |
| AATTTGGCTGATAAATATAG+GGG | 0.645702 | 2_3:+48203883 | Msa0295580:CDS |
| GTGTCACAGCCACTAAAGCA+TGG | 0.647427 | 2_3:-48203907 | None:intergenic |
| TCTGAATGCAGAAGAAATTG+TGG | 0.657378 | 2_3:+48194287 | Msa0295580:intron |
| ACACATATATATAGACCCGA+TGG | 0.677885 | 2_3:-48193469 | None:intergenic |
| AGAAGAAATTGTGGTGACTG+AGG | 0.707441 | 2_3:+48194296 | Msa0295580:intron |
| TACGTGCAACAAAGAGAACG+AGG | 0.716392 | 2_3:-48193622 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATAATATACTAAGAA+TGG | - | chr2_3:48193658-48193677 | None:intergenic | 10.0% |
| !!! | ACTTTAAATTTTTCTAATAA+TGG | + | chr2_3:48193867-48193886 | Msa0295580:intron | 10.0% |
| !! | TATAAAAAAATAATCAAATG+TGG | + | chr2_3:48193948-48193967 | Msa0295580:intron | 10.0% |
| !! | GAAAAAAAAATAAAACATTT+AGG | + | chr2_3:48194720-48194739 | Msa0295580:intron | 10.0% |
| !!! | TCTCTTTTTTTTTTTTTTTA+GGG | + | chr2_3:48194771-48194790 | Msa0295580:intron | 10.0% |
| !!! | ATTTTAAAAAAATATTGTAC+CGG | + | chr2_3:48194949-48194968 | Msa0295580:intron | 10.0% |
| !! | GAAAAATTTATTAAAAAAAG+GGG | - | chr2_3:48195585-48195604 | None:intergenic | 10.0% |
| !!! | TATATATAAAAGTTTTTCAT+AGG | - | chr2_3:48195862-48195881 | None:intergenic | 10.0% |
| !!! | AACAATAAAATGTTTTTTTT+AGG | + | chr2_3:48197514-48197533 | Msa0295580:intron | 10.0% |
| !! | TTAGTATAGTAATTAATTAT+GGG | + | chr2_3:48199230-48199249 | Msa0295580:intron | 10.0% |
| !! | AAAAAATGAAAAGATAAAAT+TGG | + | chr2_3:48201588-48201607 | Msa0295580:intron | 10.0% |
| !!! | TAGAGATTTTATTAAAAAAA+GGG | - | chr2_3:48202041-48202060 | None:intergenic | 10.0% |
| !!! | CTTGATATTTTAATATATAT+AGG | + | chr2_3:48202675-48202694 | Msa0295580:intron | 10.0% |
| !!! | ATTTTTTTCCTAAAAAAAAA+AGG | + | chr2_3:48202740-48202759 | Msa0295580:intron | 10.0% |
| !!! | TAATATTTGTTTTTTATTGT+AGG | + | chr2_3:48203753-48203772 | Msa0295580:intron | 10.0% |
| !! | ATTAACAAAAAAATATTTGT+GGG | - | chr2_3:48203790-48203809 | None:intergenic | 10.0% |
| !! | TCATATTTATCATTAAGTTA+TGG | + | chr2_3:48193565-48193584 | Msa0295580:exon | 15.0% |
| !!! | AAAGTATATCTTTAATTTTG+TGG | + | chr2_3:48193749-48193768 | Msa0295580:intron | 15.0% |
| !!! | GTTTTACGTTAATTTTTTTT+TGG | - | chr2_3:48194000-48194019 | None:intergenic | 15.0% |
| !! | TAATAATACAAATTGAACTT+TGG | + | chr2_3:48194076-48194095 | Msa0295580:intron | 15.0% |
| !! | AAAAAAATACTTTCTAATAG+TGG | - | chr2_3:48194130-48194149 | None:intergenic | 15.0% |
| !!! | GTCTCTTTTTTTTTTTTTTT+AGG | + | chr2_3:48194770-48194789 | Msa0295580:intron | 15.0% |
| !!! | CTCTTTTTTTTTTTTTTTAG+GGG | + | chr2_3:48194772-48194791 | Msa0295580:intron | 15.0% |
| !! | GACAAGATATAATATAAAAT+TGG | + | chr2_3:48195057-48195076 | Msa0295580:intron | 15.0% |
| !! | AAAATAAAACAACACTTTAA+AGG | + | chr2_3:48195444-48195463 | Msa0295580:intron | 15.0% |
| !! | AAAGAAAAAAACAACTTAAA+AGG | + | chr2_3:48195705-48195724 | Msa0295580:intron | 15.0% |
| !!! | TTTATCTTCTTTTTATGAAA+GGG | - | chr2_3:48196228-48196247 | None:intergenic | 15.0% |
| !!! | ATTTATCTTCTTTTTATGAA+AGG | - | chr2_3:48196229-48196248 | None:intergenic | 15.0% |
| !! | ATAAACTTATAACTAAAAAG+TGG | - | chr2_3:48196721-48196740 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTCAATTTTT+AGG | + | chr2_3:48197104-48197123 | Msa0295580:intron | 15.0% |
| !! | CATTTATTTAATGATGTATA+TGG | - | chr2_3:48197168-48197187 | None:intergenic | 15.0% |
| !!! | GTCAATATTGAATATTTTTT+TGG | + | chr2_3:48197460-48197479 | Msa0295580:intron | 15.0% |
| !!! | CATAGTTAATTTATTGATTT+AGG | + | chr2_3:48197594-48197613 | Msa0295580:intron | 15.0% |
| !! | AAAAAAATTGAGTTCTTTAT+GGG | - | chr2_3:48197707-48197726 | None:intergenic | 15.0% |
| !! | TAAAAAAATTGAGTTCTTTA+TGG | - | chr2_3:48197708-48197727 | None:intergenic | 15.0% |
| !! | AGGAAATTATCTTATAATTT+AGG | + | chr2_3:48198442-48198461 | Msa0295580:intron | 15.0% |
| !! | AGAATTACATATAATAACTT+TGG | - | chr2_3:48198661-48198680 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTGTCAAAATTG+TGG | + | chr2_3:48198943-48198962 | Msa0295580:intron | 15.0% |
| !! | CTTAGTATAGTAATTAATTA+TGG | + | chr2_3:48199229-48199248 | Msa0295580:intron | 15.0% |
| !! | AAATGCAGTATATAATTAAT+GGG | - | chr2_3:48199439-48199458 | None:intergenic | 15.0% |
| !!! | GGGTAAATTTTTTAATATAT+AGG | - | chr2_3:48199587-48199606 | None:intergenic | 15.0% |
| !! | TAATACATATATTGTTGTAA+TGG | + | chr2_3:48199914-48199933 | Msa0295580:intron | 15.0% |
| !!! | TGTTTTGATTTTTTTTTTTG+AGG | - | chr2_3:48200562-48200581 | None:intergenic | 15.0% |
| !!! | TTACAAATTAAAAAAAGTGT+TGG | + | chr2_3:48201304-48201323 | Msa0295580:intron | 15.0% |
| !! | AAAAATAATTATAAAGGATG+GGG | - | chr2_3:48202017-48202036 | None:intergenic | 15.0% |
| !! | GAAAAATAATTATAAAGGAT+GGG | - | chr2_3:48202018-48202037 | None:intergenic | 15.0% |
| !!! | AGAGATTTTATTAAAAAAAG+GGG | - | chr2_3:48202040-48202059 | None:intergenic | 15.0% |
| !!! | CTAGAGATTTTATTAAAAAA+AGG | - | chr2_3:48202042-48202061 | None:intergenic | 15.0% |
| !! | AATGAAAAAAAAAGATCTAT+TGG | - | chr2_3:48202459-48202478 | None:intergenic | 15.0% |
| !!! | TAAATGCTTCTTTTTTTTTT+TGG | + | chr2_3:48202910-48202929 | Msa0295580:intron | 15.0% |
| !!! | AAATGCTTCTTTTTTTTTTT+GGG | + | chr2_3:48202911-48202930 | Msa0295580:intron | 15.0% |
| !!! | GAAAATTCATTATTTGTTAT+TGG | + | chr2_3:48203498-48203517 | Msa0295580:intron | 15.0% |
| !! | AGTTAATTATATATACATGT+AGG | + | chr2_3:48203533-48203552 | Msa0295580:intron | 15.0% |
| !! | GTTAATTATATATACATGTA+GGG | + | chr2_3:48203534-48203553 | Msa0295580:intron | 15.0% |
| !! | CATTAACAAAAAAATATTTG+TGG | - | chr2_3:48203791-48203810 | None:intergenic | 15.0% |
| !! | AAAAAAAGAGACAAACAATA+CGG | - | chr2_3:48194762-48194781 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAAAATGACTTGC+TGG | - | chr2_3:48194942-48194961 | None:intergenic | 20.0% |
| !!! | ATTTCTTGCTTTTTATTTTG+AGG | + | chr2_3:48195524-48195543 | Msa0295580:intron | 20.0% |
| !!! | TTTCTTGCTTTTTATTTTGA+GGG | + | chr2_3:48195525-48195544 | Msa0295580:intron | 20.0% |
| !!! | AATAAATTTTTCATTGACCT+TGG | + | chr2_3:48195593-48195612 | Msa0295580:intron | 20.0% |
| !! | AAAAAACAACTTAAAAGGAA+AGG | + | chr2_3:48195710-48195729 | Msa0295580:intron | 20.0% |
| !!! | AAGTTTTTCATAGGAAATAA+GGG | - | chr2_3:48195853-48195872 | None:intergenic | 20.0% |
| !!! | AAAGTTTTTCATAGGAAATA+AGG | - | chr2_3:48195854-48195873 | None:intergenic | 20.0% |
| !! | CTTATTGAAAAAGATAAACA+TGG | - | chr2_3:48196536-48196555 | None:intergenic | 20.0% |
| !! | AGGGATATAGATTATTATTA+TGG | + | chr2_3:48196954-48196973 | Msa0295580:intron | 20.0% |
| !! | ATAGATTATTATTATGGTTG+TGG | + | chr2_3:48196960-48196979 | Msa0295580:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | - | chr2_3:48197193-48197212 | None:intergenic | 20.0% |
| !! | TCTATAATAAGCACAATAAA+TGG | - | chr2_3:48197256-48197275 | None:intergenic | 20.0% |
| !!! | ATCTTGTTTATCAAAAGTAT+TGG | + | chr2_3:48197395-48197414 | Msa0295580:intron | 20.0% |
| !!! | TTCTAAAATATCTACATATG+AGG | - | chr2_3:48197889-48197908 | None:intergenic | 20.0% |
| !!! | ATGATGATGTGATATTTTTT+TGG | - | chr2_3:48198240-48198259 | None:intergenic | 20.0% |
| !!! | AGACATACTTTTTTTTTTGA+GGG | - | chr2_3:48198343-48198362 | None:intergenic | 20.0% |
| !!! | TAGACATACTTTTTTTTTTG+AGG | - | chr2_3:48198344-48198363 | None:intergenic | 20.0% |
| !!! | ATCCAATATCTAAAATATAC+CGG | - | chr2_3:48198525-48198544 | None:intergenic | 20.0% |
| !! | AGCAAGTTATAATTAAAAAG+TGG | + | chr2_3:48199351-48199370 | Msa0295580:intron | 20.0% |
| !! | CAAATGCAGTATATAATTAA+TGG | - | chr2_3:48199440-48199459 | None:intergenic | 20.0% |
| !! | TGTTATTATGATAATCAGAA+GGG | - | chr2_3:48199607-48199626 | None:intergenic | 20.0% |
| !!! | TTGTTATTATGATAATCAGA+AGG | - | chr2_3:48199608-48199627 | None:intergenic | 20.0% |
| !! | TTCTGATTATCATAATAACA+AGG | + | chr2_3:48199607-48199626 | Msa0295580:intron | 20.0% |
| !! | TCTGATTATCATAATAACAA+GGG | + | chr2_3:48199608-48199627 | Msa0295580:intron | 20.0% |
| !!! | AAATTTAATTTTGGATAGCA+TGG | + | chr2_3:48199655-48199674 | Msa0295580:intron | 20.0% |
| !!! | AATTTAATTTTGGATAGCAT+GGG | + | chr2_3:48199656-48199675 | Msa0295580:intron | 20.0% |
| !!! | TTGTTTTAACTTGAATTGAA+CGG | + | chr2_3:48200350-48200369 | Msa0295580:intron | 20.0% |
| !! | ACATAACTTTCTTTCATAAA+AGG | + | chr2_3:48200395-48200414 | Msa0295580:intron | 20.0% |
| !! | ATTTCATTTAGTACTATAGT+TGG | + | chr2_3:48200493-48200512 | Msa0295580:intron | 20.0% |
| !!! | TTGATTTTTTTTTTTGAGGA+TGG | - | chr2_3:48200558-48200577 | None:intergenic | 20.0% |
| !! | TTTAATAAGAGTTATGTGAT+GGG | + | chr2_3:48200754-48200773 | Msa0295580:intron | 20.0% |
| !!! | AAATGTGAATAACACTTTTT+TGG | + | chr2_3:48200780-48200799 | Msa0295580:intron | 20.0% |
| !!! | AATGTGAATAACACTTTTTT+GGG | + | chr2_3:48200781-48200800 | Msa0295580:intron | 20.0% |
| !!! | TTAAAAAAGACCTTTTAAGT+CGG | + | chr2_3:48200850-48200869 | Msa0295580:intron | 20.0% |
| !!! | AATATTAGGTTTGTTAATCT+AGG | + | chr2_3:48200939-48200958 | Msa0295580:intron | 20.0% |
| !!! | AATATTAGGTTTGTTAATCT+AGG | + | chr2_3:48200939-48200958 | Msa0295580:intron | 20.0% |
| !!! | TTCAATTGTTTTATGATTCT+AGG | + | chr2_3:48201222-48201241 | Msa0295580:intron | 20.0% |
| !!! | TTTATGACAACTTTAAGATT+CGG | + | chr2_3:48201493-48201512 | Msa0295580:intron | 20.0% |
| !!! | AAAATTGGAAAGTATAAGTT+CGG | + | chr2_3:48201603-48201622 | Msa0295580:intron | 20.0% |
| !!! | AGTATCTAATTTTTTGTGTT+GGG | - | chr2_3:48201735-48201754 | None:intergenic | 20.0% |
| !!! | AGATTTCCTTAATATGTTTT+TGG | + | chr2_3:48201927-48201946 | Msa0295580:intron | 20.0% |
| !! | AAACAACCAAAAACATATTA+AGG | - | chr2_3:48201936-48201955 | None:intergenic | 20.0% |
| !! | GGAAAAATAATTATAAAGGA+TGG | - | chr2_3:48202019-48202038 | None:intergenic | 20.0% |
| !! | AAGGGGAAAAATAATTATAA+AGG | - | chr2_3:48202023-48202042 | None:intergenic | 20.0% |
| !!! | TTAATAAAATCTCTAGAGTT+TGG | + | chr2_3:48202046-48202065 | Msa0295580:intron | 20.0% |
| !!! | TTTTTAATAAGTAAGAAGAG+AGG | - | chr2_3:48202141-48202160 | None:intergenic | 20.0% |
| !!! | TCTATTTTTATACATTCTTG+AGG | - | chr2_3:48202556-48202575 | None:intergenic | 20.0% |
| !!! | ATAGATTTTTCTTTCATAAG+TGG | + | chr2_3:48202571-48202590 | Msa0295580:intron | 20.0% |
| !! | ATTAAAATATCAAGACACAA+AGG | - | chr2_3:48202669-48202688 | None:intergenic | 20.0% |
| !!! | TTGATACTCCTTTTTTTTTT+AGG | - | chr2_3:48202751-48202770 | None:intergenic | 20.0% |
| !!! | AAAAGAAGCATTTATTTGAA+CGG | - | chr2_3:48202904-48202923 | None:intergenic | 20.0% |
| !!! | ATATCAAGTTTGTATTTTCA+TGG | - | chr2_3:48203028-48203047 | None:intergenic | 20.0% |
| !! | TTAAAATCATAATTAAGCCA+TGG | + | chr2_3:48203187-48203206 | Msa0295580:intron | 20.0% |
| !! | ACGATTAATACTAAAAATGA+TGG | - | chr2_3:48203277-48203296 | None:intergenic | 20.0% |
| !!! | AATGAACACTATCTTTTTTA+GGG | - | chr2_3:48203569-48203588 | None:intergenic | 20.0% |
| !! | TAATTAACGTCTCATTAAAA+AGG | - | chr2_3:48203617-48203636 | None:intergenic | 20.0% |
| !!! | GAGACTTTTTTAAAATTGTT+TGG | + | chr2_3:48203683-48203702 | Msa0295580:intron | 20.0% |
| !!! | CGCAGATTATTATTTTTTAA+TGG | + | chr2_3:48203708-48203727 | Msa0295580:intron | 20.0% |
| ! | CATTAATCAATAATCCCATT+TGG | + | chr2_3:48194665-48194684 | Msa0295580:intron | 25.0% |
| ! | GTTAAATGATAAAATTGTCC+TGG | + | chr2_3:48195222-48195241 | Msa0295580:intron | 25.0% |
| ! | TGCATTGCATAAATGAAAAA+TGG | + | chr2_3:48195736-48195755 | Msa0295580:intron | 25.0% |
| ! | AAATTCAAACAAAAAGAACG+AGG | - | chr2_3:48196176-48196195 | None:intergenic | 25.0% |
| ! | AGATGATGAAAAACTGAAAT+CGG | + | chr2_3:48196257-48196276 | Msa0295580:intron | 25.0% |
| ! | TGAAATCGGTATAAAAAAGA+GGG | + | chr2_3:48196271-48196290 | Msa0295580:intron | 25.0% |
| ! | AAAAAGAGGGAAAATTGAAA+TGG | + | chr2_3:48196284-48196303 | Msa0295580:intron | 25.0% |
| ! | GAAATGGATGGAAAAAAAAA+AGG | + | chr2_3:48196300-48196319 | Msa0295580:intron | 25.0% |
| ! | TAAAACGTGCAAATTATGAA+CGG | + | chr2_3:48196437-48196456 | Msa0295580:intron | 25.0% |
| !!! | AAAGATAAACATGGTTTGTT+CGG | - | chr2_3:48196527-48196546 | None:intergenic | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | + | chr2_3:48196746-48196765 | Msa0295580:intron | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | - | chr2_3:48196752-48196771 | None:intergenic | 25.0% |
| ! | TGTACAATATATAAAACCAG+CGG | - | chr2_3:48197022-48197041 | None:intergenic | 25.0% |
| ! | TTATATATTGTACAGTTCCA+TGG | + | chr2_3:48197028-48197047 | Msa0295580:intron | 25.0% |
| !!! | TGCTTATATTTTGAAACAGA+GGG | - | chr2_3:48197091-48197110 | None:intergenic | 25.0% |
| !!! | TTGCTTATATTTTGAAACAG+AGG | - | chr2_3:48197092-48197111 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr2_3:48197129-48197148 | Msa0295580:intron | 25.0% |
| ! | GATGTATATGGTTCATAATA+TGG | - | chr2_3:48197156-48197175 | None:intergenic | 25.0% |
| !! | ATAAGCACAATAAATGGATT+GGG | - | chr2_3:48197250-48197269 | None:intergenic | 25.0% |
| ! | AATAAGCACAATAAATGGAT+TGG | - | chr2_3:48197251-48197270 | None:intergenic | 25.0% |
| ! | TGGCCTAAAGATATAATAAA+GGG | - | chr2_3:48197668-48197687 | None:intergenic | 25.0% |
| ! | TTGGCCTAAAGATATAATAA+AGG | - | chr2_3:48197669-48197688 | None:intergenic | 25.0% |
| !!! | GCATCTGTTTTGTTTATTAT+CGG | + | chr2_3:48198184-48198203 | Msa0295580:intron | 25.0% |
| ! | TAGACATACTTATTAGTCAA+TGG | - | chr2_3:48198312-48198331 | None:intergenic | 25.0% |
| !! | ACTTTGTGGTTTATCTTTTA+GGG | + | chr2_3:48198416-48198435 | Msa0295580:intron | 25.0% |
| ! | AAGCTTAATACTATAACTAC+CGG | + | chr2_3:48198503-48198522 | Msa0295580:intron | 25.0% |
| !!! | TACCGGTATATTTTAGATAT+TGG | + | chr2_3:48198520-48198539 | Msa0295580:intron | 25.0% |
| ! | ATTCAAATCCTATAAGGTAA+AGG | - | chr2_3:48198727-48198746 | None:intergenic | 25.0% |
| ! | TATAGGATTCAAATCCTATA+AGG | - | chr2_3:48198733-48198752 | None:intergenic | 25.0% |
| ! | ATAAAAATCCACCTCTATAT+CGG | + | chr2_3:48198896-48198915 | Msa0295580:intron | 25.0% |
| ! | AAAGAAATATCCACAAGAAA+CGG | - | chr2_3:48198923-48198942 | None:intergenic | 25.0% |
| !! | ATAGAAGACACATTTTATGA+AGG | + | chr2_3:48199258-48199277 | Msa0295580:intron | 25.0% |
| ! | ACACTTTCATAAAAACTAGT+TGG | - | chr2_3:48199326-48199345 | None:intergenic | 25.0% |
| ! | TTTGCTTATATTATAGTGAC+CGG | - | chr2_3:48199759-48199778 | None:intergenic | 25.0% |
| ! | GTCTATATCTAGTAATGATA+TGG | + | chr2_3:48199818-48199837 | Msa0295580:intron | 25.0% |
| ! | TATATTGTTGTAATGGTACT+TGG | + | chr2_3:48199921-48199940 | Msa0295580:intron | 25.0% |
| ! | TGCAGAAACATTGAAATTTA+TGG | - | chr2_3:48200080-48200099 | None:intergenic | 25.0% |
| ! | GTATTAGTTATGCACTATTA+TGG | + | chr2_3:48200247-48200266 | Msa0295580:intron | 25.0% |
| !!! | TGTTTTAACTTGAATTGAAC+GGG | + | chr2_3:48200351-48200370 | Msa0295580:intron | 25.0% |
| ! | AAACACAATCATAACTTTCT+TGG | + | chr2_3:48200424-48200443 | Msa0295580:intron | 25.0% |
| !!! | ATTTTTTTTTTTGAGGATGG+TGG | - | chr2_3:48200555-48200574 | None:intergenic | 25.0% |
| !! | TAAAATATCAAGAAGCACAA+AGG | + | chr2_3:48200612-48200631 | Msa0295580:intron | 25.0% |
| !! | TTGTTTATGCATCTTTAAGA+CGG | + | chr2_3:48200690-48200709 | Msa0295580:intron | 25.0% |
| ! | AAGTTAATTCAAAACACTTG+AGG | - | chr2_3:48200717-48200736 | None:intergenic | 25.0% |
| ! | CTTTAATAAGAGTTATGTGA+TGG | + | chr2_3:48200753-48200772 | Msa0295580:intron | 25.0% |
| !!! | ATGTGAATAACACTTTTTTG+GGG | + | chr2_3:48200782-48200801 | Msa0295580:intron | 25.0% |
| !!! | TAAAAAAGACCTTTTAAGTC+GGG | + | chr2_3:48200851-48200870 | Msa0295580:intron | 25.0% |
| ! | ATAAACTTATGAGATCTTTG+TGG | - | chr2_3:48201136-48201155 | None:intergenic | 25.0% |
| ! | AAATATATTGCAAGTCTCTA+TGG | - | chr2_3:48201196-48201215 | None:intergenic | 25.0% |
| !!! | TTGTTTTATGATTCTAGGTT+AGG | + | chr2_3:48201227-48201246 | Msa0295580:intron | 25.0% |
| !!! | TTGTAAACTATTGACTTGTT+TGG | - | chr2_3:48201686-48201705 | None:intergenic | 25.0% |
| !!! | GAGTATCTAATTTTTTGTGT+TGG | - | chr2_3:48201736-48201755 | None:intergenic | 25.0% |
| ! | TATTAAGGAAATCTGTAGTT+AGG | - | chr2_3:48201921-48201940 | None:intergenic | 25.0% |
| !!! | TTTCCTTTTTGTTTCTTTTG+AGG | + | chr2_3:48201977-48201996 | Msa0295580:intron | 25.0% |
| !!! | TTCCTTTTTGTTTCTTTTGA+GGG | + | chr2_3:48201978-48201997 | Msa0295580:intron | 25.0% |
| ! | GAGAAAAACTTAGATAAAGA+GGG | - | chr2_3:48202212-48202231 | None:intergenic | 25.0% |
| ! | AGAGAAAAACTTAGATAAAG+AGG | - | chr2_3:48202213-48202232 | None:intergenic | 25.0% |
| ! | AGGAAAATGAAATTTCCATA+AGG | + | chr2_3:48202288-48202307 | Msa0295580:intron | 25.0% |
| ! | GGAAAATGAAATTTCCATAA+GGG | + | chr2_3:48202289-48202308 | Msa0295580:intron | 25.0% |
| !!! | AAATTTCCATAAGGGTATTT+AGG | + | chr2_3:48202297-48202316 | Msa0295580:intron | 25.0% |
| ! | AAAATCAAATGAGTAGCAAT+TGG | - | chr2_3:48202505-48202524 | None:intergenic | 25.0% |
| !! | TTTTTATACATTCTTGAGGA+AGG | - | chr2_3:48202552-48202571 | None:intergenic | 25.0% |
| !!! | CAATGAACACTATCTTTTTT+AGG | - | chr2_3:48203570-48203589 | None:intergenic | 25.0% |
| ! | TATTAATGCAGAAGAAATTG+TGG | + | chr2_3:48203837-48203856 | Msa0295580:intron | 25.0% |
| ! | AGAATTTGGCTGATAAATAT+AGG | + | chr2_3:48203881-48203900 | Msa0295580:CDS | 25.0% |
| ! | GAATTTGGCTGATAAATATA+GGG | + | chr2_3:48203882-48203901 | Msa0295580:CDS | 25.0% |
| ! | AATTTGGCTGATAAATATAG+GGG | + | chr2_3:48203883-48203902 | Msa0295580:CDS | 25.0% |
| ! | GTGTACTAAAAGATGTTAAA+TGG | + | chr2_3:48203990-48204009 | Msa0295580:exon | 25.0% |
| ! | TTATGCTCTTCTATATCATA+TGG | + | chr2_3:48204151-48204170 | Msa0295580:three_prime_UTR | 25.0% |
| ATGGAGAAGAAATCATTAGT+TGG | + | chr2_3:48193584-48193603 | Msa0295580:CDS | 30.0% | |
| !!! | GTATAGTTTTGATGTCTTGA+AGG | - | chr2_3:48193804-48193823 | None:intergenic | 30.0% |
| AAATTGAACTTTGGATAGCA+TGG | + | chr2_3:48194085-48194104 | Msa0295580:intron | 30.0% | |
| AATTGAACTTTGGATAGCAT+GGG | + | chr2_3:48194086-48194105 | Msa0295580:intron | 30.0% | |
| AGAAACTGTTAAATGGATCA+TGG | + | chr2_3:48194453-48194472 | Msa0295580:intron | 30.0% | |
| ATATATGTATCCATGCTTGT+TGG | - | chr2_3:48194486-48194505 | None:intergenic | 30.0% | |
| CAAGCATGGATACATATATA+TGG | + | chr2_3:48194487-48194506 | Msa0295580:intron | 30.0% | |
| TAGTACCTAAATGTTGGAAA+TGG | - | chr2_3:48194691-48194710 | None:intergenic | 30.0% | |
| AGTCATTAGTACCTAAATGT+TGG | - | chr2_3:48194697-48194716 | None:intergenic | 30.0% | |
| CATTTAGGTACTAATTGTCT+TGG | + | chr2_3:48194735-48194754 | Msa0295580:intron | 30.0% | |
| GAGAGATTTGCAAAACATTA+AGG | - | chr2_3:48194861-48194880 | None:intergenic | 30.0% | |
| !! | TGCTCTTGTGTTTCTATTTT+TGG | + | chr2_3:48194984-48195003 | Msa0295580:intron | 30.0% |
| TTGTAGTTTACCAAAAACAC+AGG | - | chr2_3:48195254-48195273 | None:intergenic | 30.0% | |
| !! | TTTGTTGATTCTGTCGAATA+AGG | - | chr2_3:48195410-48195429 | None:intergenic | 30.0% |
| TAATTACAAGTTTCCTTAGG+CGG | + | chr2_3:48195479-48195498 | Msa0295580:intron | 30.0% | |
| ! | TTTTTGCTAAGCTAAGAGTA+AGG | - | chr2_3:48195688-48195707 | None:intergenic | 30.0% |
| ! | AGTCTTTTATCTCTGTAACT+TGG | + | chr2_3:48195789-48195808 | Msa0295580:intron | 30.0% |
| GATAAGTTACATTCGATAGA+TGG | - | chr2_3:48196044-48196063 | None:intergenic | 30.0% | |
| TATCGAATGTAACTTATCTC+TGG | + | chr2_3:48196046-48196065 | Msa0295580:intron | 30.0% | |
| ATCGAATGTAACTTATCTCT+GGG | + | chr2_3:48196047-48196066 | Msa0295580:intron | 30.0% | |
| CGAAGTTAGAACTTTATCTT+TGG | - | chr2_3:48196079-48196098 | None:intergenic | 30.0% | |
| AAAAGCAATATAGAGTTACC+TGG | - | chr2_3:48196149-48196168 | None:intergenic | 30.0% | |
| ! | TTTTATGAAAGGGTTGAAAG+AGG | - | chr2_3:48196218-48196237 | None:intergenic | 30.0% |
| CTGAAATCGGTATAAAAAAG+AGG | + | chr2_3:48196270-48196289 | Msa0295580:intron | 30.0% | |
| ! | CTAGAAGACACATTTTATGA+AGG | - | chr2_3:48196814-48196833 | None:intergenic | 30.0% |
| !! | ATGTTGAAAACTTTGAGTTG+CGG | - | chr2_3:48197065-48197084 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACCG+AGG | + | chr2_3:48197205-48197224 | Msa0295580:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACCGA+GGG | + | chr2_3:48197206-48197225 | Msa0295580:intron | 30.0% |
| ! | AACGTATACTCACATTTTCA+AGG | - | chr2_3:48197295-48197314 | None:intergenic | 30.0% |
| ATGTGAGTATACGTTACATT+CGG | + | chr2_3:48197300-48197319 | Msa0295580:intron | 30.0% | |
| GCTCCCTTTATTATATCTTT+AGG | + | chr2_3:48197662-48197681 | Msa0295580:intron | 30.0% | |
| ! | TGGGCTAGAAAAATAGATAT+TGG | - | chr2_3:48197688-48197707 | None:intergenic | 30.0% |
| AAAAGGAAATGCCAAAAGAA+AGG | - | chr2_3:48197803-48197822 | None:intergenic | 30.0% | |
| ACAAATATCTCTCTCACAAA+AGG | - | chr2_3:48197820-48197839 | None:intergenic | 30.0% | |
| TATGTGAGTGATTCATCATT+AGG | - | chr2_3:48198048-48198067 | None:intergenic | 30.0% | |
| TAATGATGAATCACTCACAT+AGG | + | chr2_3:48198047-48198066 | Msa0295580:intron | 30.0% | |
| CATCACAAACAATTTCAATG+CGG | + | chr2_3:48198257-48198276 | Msa0295580:intron | 30.0% | |
| TAGGTATACTACTTAGTCAA+TGG | - | chr2_3:48198387-48198406 | None:intergenic | 30.0% | |
| ! | ATAAACCACAAAGTCTCTTT+TGG | - | chr2_3:48198410-48198429 | None:intergenic | 30.0% |
| ! | GACTTTGTGGTTTATCTTTT+AGG | + | chr2_3:48198415-48198434 | Msa0295580:intron | 30.0% |
| !!! | AACTAGTGATTTGTTTTCCA+TGG | - | chr2_3:48199154-48199173 | None:intergenic | 30.0% |
| ATGGAAAACAAATCACTAGT+TGG | + | chr2_3:48199153-48199172 | Msa0295580:intron | 30.0% | |
| ! | GTCTTTTAACAGATGTCAAT+AGG | - | chr2_3:48199302-48199321 | None:intergenic | 30.0% |
| ! | TAGTGTTGTTCTTCGAAAAA+TGG | + | chr2_3:48199689-48199708 | Msa0295580:intron | 30.0% |
| GTTCTTCGAAAAATGGAATT+TGG | + | chr2_3:48199696-48199715 | Msa0295580:intron | 30.0% | |
| TTCGAAAAATGGAATTTGGA+TGG | + | chr2_3:48199700-48199719 | Msa0295580:intron | 30.0% | |
| AACAAAGCACACTTAATTAG+TGG | + | chr2_3:48200048-48200067 | Msa0295580:intron | 30.0% | |
| AATTATTTCAAAGACAACGC+AGG | - | chr2_3:48200203-48200222 | None:intergenic | 30.0% | |
| CTGAAAATGCCAAAAAAAGT+TGG | - | chr2_3:48200450-48200469 | None:intergenic | 30.0% | |
| ! | TGGCATTTTCAGTATTTATG+CGG | + | chr2_3:48200458-48200477 | Msa0295580:intron | 30.0% |
| CAATATATTCCGTAACATAC+TGG | - | chr2_3:48200589-48200608 | None:intergenic | 30.0% | |
| ! | GGATAAAAAACTAGTTTCAC+TGG | + | chr2_3:48200803-48200822 | Msa0295580:intron | 30.0% |
| ! | TTGTTATGTCGGCTAATATA+AGG | - | chr2_3:48200888-48200907 | None:intergenic | 30.0% |
| TGAATATTCCTATCAAGATG+TGG | + | chr2_3:48201059-48201078 | Msa0295580:intron | 30.0% | |
| ATCTATTTCCACATCTTGAT+AGG | - | chr2_3:48201070-48201089 | None:intergenic | 30.0% | |
| AAAGAAAACATCTATGGAGT+TGG | - | chr2_3:48201096-48201115 | None:intergenic | 30.0% | |
| ! | AACTCCATAGATGTTTTCTT+TGG | + | chr2_3:48201095-48201114 | Msa0295580:intron | 30.0% |
| ! | ACTCCATAGATGTTTTCTTT+GGG | + | chr2_3:48201096-48201115 | Msa0295580:intron | 30.0% |
| !! | ACTCATCGATTATATCCTTT+TGG | + | chr2_3:48201345-48201364 | Msa0295580:intron | 30.0% |
| !! | CTCATCGATTATATCCTTTT+GGG | + | chr2_3:48201346-48201365 | Msa0295580:intron | 30.0% |
| AAGTACATAATCAACCCAAA+AGG | - | chr2_3:48201363-48201382 | None:intergenic | 30.0% | |
| ACGAGACATAGAAAGATAAT+AGG | - | chr2_3:48201463-48201482 | None:intergenic | 30.0% | |
| AGATACTAGTTGTTAGACAA+AGG | - | chr2_3:48201545-48201564 | None:intergenic | 30.0% | |
| TTTATCTCATTCTCATGTCT+TGG | - | chr2_3:48201783-48201802 | None:intergenic | 30.0% | |
| ! | AGTTGAAGGTTGATTTCTTT+CGG | + | chr2_3:48201880-48201899 | Msa0295580:intron | 30.0% |
| AACCCTCAAAAGAAACAAAA+AGG | - | chr2_3:48201983-48202002 | None:intergenic | 30.0% | |
| !! | ATAAAATCTCTAGAGTTTGG+CGG | + | chr2_3:48202049-48202068 | Msa0295580:intron | 30.0% |
| ! | GATTTTTCTTTCATAAGTGG+AGG | + | chr2_3:48202574-48202593 | Msa0295580:intron | 30.0% |
| ! | TCAAGTTTGTATTTTCATGG+AGG | - | chr2_3:48203025-48203044 | None:intergenic | 30.0% |
| !!! | TGCTATTGATTTTTTCTCCA+TGG | - | chr2_3:48203207-48203226 | None:intergenic | 30.0% |
| ATGGAGAAAAAATCAATAGC+AGG | + | chr2_3:48203206-48203225 | Msa0295580:intron | 30.0% | |
| ATAATTTCGTTTCCAACTCT+TGG | + | chr2_3:48204189-48204208 | Msa0295580:three_prime_UTR | 30.0% | |
| TAATTTCGTTTCCAACTCTT+GGG | + | chr2_3:48204190-48204209 | Msa0295580:three_prime_UTR | 30.0% | |
| TTAAGTGTTTGTGTCTAGTG+TGG | - | chr2_3:48193519-48193538 | None:intergenic | 35.0% | |
| TTTGACACATGATGTAGACT+TGG | - | chr2_3:48193775-48193794 | None:intergenic | 35.0% | |
| TCTGAATGCAGAAGAAATTG+TGG | + | chr2_3:48194287-48194306 | Msa0295580:intron | 35.0% | |
| GTGCACTAGAAACTGTTAAA+TGG | + | chr2_3:48194446-48194465 | Msa0295580:intron | 35.0% | |
| AATGTTGGAAATGGCCAAAT+GGG | - | chr2_3:48194682-48194701 | None:intergenic | 35.0% | |
| AAATGTTGGAAATGGCCAAA+TGG | - | chr2_3:48194683-48194702 | None:intergenic | 35.0% | |
| TTTGGCCATTTCCAACATTT+AGG | + | chr2_3:48194683-48194702 | Msa0295580:intron | 35.0% | |
| TTGCAAAACATTAAGGTGAG+TGG | - | chr2_3:48194854-48194873 | None:intergenic | 35.0% | |
| ! | AATTTTGTTGATCCGTCTGA+TGG | + | chr2_3:48195019-48195038 | Msa0295580:intron | 35.0% |
| GCCTAATTACAAGTTTCCTT+AGG | + | chr2_3:48195476-48195495 | Msa0295580:intron | 35.0% | |
| GCCTAAGGAAACTTGTAATT+AGG | - | chr2_3:48195480-48195499 | None:intergenic | 35.0% | |
| TACATTCGATAGATGGTGAT+GGG | - | chr2_3:48196037-48196056 | None:intergenic | 35.0% | |
| TTACATTCGATAGATGGTGA+TGG | - | chr2_3:48196038-48196057 | None:intergenic | 35.0% | |
| TAAAAACACAGACTAACACC+AGG | + | chr2_3:48196128-48196147 | Msa0295580:intron | 35.0% | |
| AGAGGGAAAATTGAAATGGA+TGG | + | chr2_3:48196288-48196307 | Msa0295580:intron | 35.0% | |
| CGGTAGGCATAATGAAATAA+AGG | - | chr2_3:48196993-48197012 | None:intergenic | 35.0% | |
| ACAATATATAAAACCAGCGG+TGG | - | chr2_3:48197019-48197038 | None:intergenic | 35.0% | |
| !! | CACATTTTCAAGGTGTACAA+TGG | - | chr2_3:48197285-48197304 | None:intergenic | 35.0% |
| CTTGCAATTTCTTCCATCTA+AGG | + | chr2_3:48198127-48198146 | Msa0295580:intron | 35.0% | |
| GTTCTTAAGTACTCCTTAGA+TGG | - | chr2_3:48198143-48198162 | None:intergenic | 35.0% | |
| !!! | TGGTTTATCTTTTAGGGTTG+AGG | + | chr2_3:48198422-48198441 | Msa0295580:intron | 35.0% |
| CAAATCCTATAAGGTAAAGG+TGG | - | chr2_3:48198724-48198743 | None:intergenic | 35.0% | |
| GTAACGATACATTGTGAAGT+CGG | - | chr2_3:48198759-48198778 | None:intergenic | 35.0% | |
| TACTAGAAAGACAACTCATG+TGG | + | chr2_3:48198776-48198795 | Msa0295580:intron | 35.0% | |
| ACTAGAAAGACAACTCATGT+GGG | + | chr2_3:48198777-48198796 | Msa0295580:intron | 35.0% | |
| GACATATATATAGCCCCAAA+GGG | - | chr2_3:48199037-48199056 | None:intergenic | 35.0% | |
| AGACATATATATAGCCCCAA+AGG | - | chr2_3:48199038-48199057 | None:intergenic | 35.0% | |
| TGCTAAAAGACACTCTTTAG+AGG | - | chr2_3:48199413-48199432 | None:intergenic | 35.0% | |
| CTTATATTATAGTGACCGGA+GGG | - | chr2_3:48199755-48199774 | None:intergenic | 35.0% | |
| AAATTGTGGTGATTGAAGCA+AGG | + | chr2_3:48199953-48199972 | Msa0295580:CDS | 35.0% | |
| CATTTGGCTGATACATATAG+AGG | + | chr2_3:48199985-48200004 | Msa0295580:CDS | 35.0% | |
| !!! | CTTTCTTGGCCAACTTTTTT+TGG | + | chr2_3:48200438-48200457 | Msa0295580:intron | 35.0% |
| AAACAACCACCAGTATGTTA+CGG | + | chr2_3:48200577-48200596 | Msa0295580:intron | 35.0% | |
| TATATTCCGTAACATACTGG+TGG | - | chr2_3:48200586-48200605 | None:intergenic | 35.0% | |
| GAGTGTCATCAACATAGTAA+AGG | - | chr2_3:48200645-48200664 | None:intergenic | 35.0% | |
| !! | GTTGATGACACTCTTCTTAT+AGG | + | chr2_3:48200652-48200671 | Msa0295580:intron | 35.0% |
| !! | CACGTCAAAACTTGTTATGT+CGG | - | chr2_3:48200899-48200918 | None:intergenic | 35.0% |
| !! | CAAGTTTTGACGTGTTAAGT+TGG | + | chr2_3:48200905-48200924 | Msa0295580:intron | 35.0% |
| !!! | TTTTGACGTGTTAAGTTGGT+TGG | + | chr2_3:48200909-48200928 | Msa0295580:intron | 35.0% |
| !! | GGTTTGTTAATCTAGGAGTA+TGG | + | chr2_3:48200946-48200965 | Msa0295580:intron | 35.0% |
| ! | TTAATCTAGGAGTATGGTCA+TGG | + | chr2_3:48200952-48200971 | Msa0295580:intron | 35.0% |
| GAGTATGGTCATGGAATATT+AGG | + | chr2_3:48200961-48200980 | Msa0295580:intron | 35.0% | |
| !! | GGTTTGTTAATCTAGGAGTA+TGG | + | chr2_3:48200946-48200965 | Msa0295580:intron | 35.0% |
| ! | TTGTTAATCTAGGAGTATGG+TGG | + | chr2_3:48200949-48200968 | Msa0295580:intron | 35.0% |
| TTGAATTTGATCCCCATCTT+CGG | + | chr2_3:48201025-48201044 | Msa0295580:intron | 35.0% | |
| TTAAGAACGAGATCAACTCA+TGG | + | chr2_3:48201633-48201652 | Msa0295580:intron | 35.0% | |
| AAATCAACCTTCAACTCATC+TGG | - | chr2_3:48201876-48201895 | None:intergenic | 35.0% | |
| ! | GTTGAAGGTTGATTTCTTTC+GGG | + | chr2_3:48201881-48201900 | Msa0295580:intron | 35.0% |
| ATTATAAAGGATGGGGAACT+AGG | - | chr2_3:48202010-48202029 | None:intergenic | 35.0% | |
| !! | TTTGATTTGCCTTCTACAGT+TGG | + | chr2_3:48202264-48202283 | Msa0295580:intron | 35.0% |
| ! | ATTTTCCTACCAACTGTAGA+AGG | - | chr2_3:48202276-48202295 | None:intergenic | 35.0% |
| !!! | TTTTTGGGACAACTCATGTA+CGG | + | chr2_3:48202926-48202945 | Msa0295580:intron | 35.0% |
| TTCTTACTAGTCAAACCTCT+TGG | + | chr2_3:48203079-48203098 | Msa0295580:intron | 35.0% | |
| TCTTACTAGTCAAACCTCTT+GGG | + | chr2_3:48203080-48203099 | Msa0295580:intron | 35.0% | |
| AAGTCTATTCCATGCATTGT+TGG | - | chr2_3:48204023-48204042 | None:intergenic | 35.0% | |
| AGAAGAAATTGTGGTGACTG+AGG | + | chr2_3:48194296-48194315 | Msa0295580:intron | 40.0% | |
| GGCAAACACTTGTGAGAATT+TGG | + | chr2_3:48194317-48194336 | Msa0295580:CDS | 40.0% | |
| AACACTTGTGAGAATTTGGC+TGG | + | chr2_3:48194321-48194340 | Msa0295580:CDS | 40.0% | |
| AGAATTTGGCTGGTACATTC+AGG | + | chr2_3:48194331-48194350 | Msa0295580:CDS | 40.0% | |
| GAATTTGGCTGGTACATTCA+GGG | + | chr2_3:48194332-48194351 | Msa0295580:CDS | 40.0% | |
| AATTTGGCTGGTACATTCAG+GGG | + | chr2_3:48194333-48194352 | Msa0295580:CDS | 40.0% | |
| ! | CAGTTTGAGTTACCGAAACA+TGG | - | chr2_3:48194360-48194379 | None:intergenic | 40.0% |
| !! | ACCAAAGAGCATTTGGTTAG+TGG | + | chr2_3:48194396-48194415 | Msa0295580:CDS | 40.0% |
| ! | TGGATTTTCTCCAACAAGCA+TGG | + | chr2_3:48194473-48194492 | Msa0295580:intron | 40.0% |
| ACATTAAGGTGAGTGGATGA+TGG | - | chr2_3:48194847-48194866 | None:intergenic | 40.0% | |
| TGCAAATCTCTCGTATCAGT+TGG | + | chr2_3:48194869-48194888 | Msa0295580:intron | 40.0% | |
| !! | AAGAGCACTTCTTAACTTGC+CGG | - | chr2_3:48194971-48194990 | None:intergenic | 40.0% |
| ATCACATCCTAACCATCAGA+CGG | - | chr2_3:48195034-48195053 | None:intergenic | 40.0% | |
| CAAAAACACAGGTAAACACC+AGG | - | chr2_3:48195243-48195262 | None:intergenic | 40.0% | |
| ! | CTGGTGTTTACCTGTGTTTT+TGG | + | chr2_3:48195241-48195260 | Msa0295580:intron | 40.0% |
| CAAATAAAAACAGCCGCCTA+AGG | - | chr2_3:48195495-48195514 | None:intergenic | 40.0% | |
| GACAAAGATATACAAGAGGG+GGG | - | chr2_3:48195563-48195582 | None:intergenic | 40.0% | |
| GGACAAAGATATACAAGAGG+GGG | - | chr2_3:48195564-48195583 | None:intergenic | 40.0% | |
| GGGACAAAGATATACAAGAG+GGG | - | chr2_3:48195565-48195584 | None:intergenic | 40.0% | |
| GGGGACAAAGATATACAAGA+GGG | - | chr2_3:48195566-48195585 | None:intergenic | 40.0% | |
| AGGGGACAAAGATATACAAG+AGG | - | chr2_3:48195567-48195586 | None:intergenic | 40.0% | |
| AGGAAAAAGTTGAAGCAACG+AGG | + | chr2_3:48196320-48196339 | Msa0295580:intron | 40.0% | |
| CTAAAAGACACCTTCATAGC+TGG | - | chr2_3:48196673-48196692 | None:intergenic | 40.0% | |
| ! | TTTTAGCAATCCACACCTCA+AGG | + | chr2_3:48196687-48196706 | Msa0295580:intron | 40.0% |
| AAAGTGGAAATCACACCTTG+AGG | - | chr2_3:48196705-48196724 | None:intergenic | 40.0% | |
| TATAAAACCAGCGGTGGAAT+CGG | - | chr2_3:48197013-48197032 | None:intergenic | 40.0% | |
| ACCTTGATGTTATACTCCCT+CGG | - | chr2_3:48197225-48197244 | None:intergenic | 40.0% | |
| ! | TTTCAACCCGACCTTTCTTT+TGG | + | chr2_3:48197789-48197808 | Msa0295580:intron | 40.0% |
| GAAATGCCAAAAGAAAGGTC+GGG | - | chr2_3:48197798-48197817 | None:intergenic | 40.0% | |
| GGAAATGCCAAAAGAAAGGT+CGG | - | chr2_3:48197799-48197818 | None:intergenic | 40.0% | |
| ACCTACCAAAAGAGACTTTG+TGG | + | chr2_3:48198402-48198421 | Msa0295580:intron | 40.0% | |
| ! | ACCACAAAGTCTCTTTTGGT+AGG | - | chr2_3:48198406-48198425 | None:intergenic | 40.0% |
| CTATAAGGTAAAGGTGGCTA+AGG | - | chr2_3:48198718-48198737 | None:intergenic | 40.0% | |
| CTTAGCCACCTTTACCTTAT+AGG | + | chr2_3:48198716-48198735 | Msa0295580:intron | 40.0% | |
| CATTGTGAAGTCGGCAATAT+AGG | - | chr2_3:48198750-48198769 | None:intergenic | 40.0% | |
| AGAGAGAAAAGTCTTGCATG+GGG | - | chr2_3:48198858-48198877 | None:intergenic | 40.0% | |
| CAGAGAGAAAAGTCTTGCAT+GGG | - | chr2_3:48198859-48198878 | None:intergenic | 40.0% | |
| TCAGAGAGAAAAGTCTTGCA+TGG | - | chr2_3:48198860-48198879 | None:intergenic | 40.0% | |
| !! | AGAGGTGGATTTTTATCGTC+AGG | - | chr2_3:48198892-48198911 | None:intergenic | 40.0% |
| TAGCTATTGAAGCTCCCTTT+GGG | + | chr2_3:48199020-48199039 | Msa0295580:intron | 40.0% | |
| ACTTCATCTTCAGTAAGCCA+TGG | + | chr2_3:48199134-48199153 | Msa0295580:intron | 40.0% | |
| AAGTGGATAATCACACCTTG+AGG | + | chr2_3:48199368-48199387 | Msa0295580:intron | 40.0% | |
| ! | TTTTAGCAAGTCACACCTCA+AGG | - | chr2_3:48199386-48199405 | None:intergenic | 40.0% |
| GCTTATATTATAGTGACCGG+AGG | - | chr2_3:48199756-48199775 | None:intergenic | 40.0% | |
| CTTGGATGCAGAAGAAATTG+TGG | + | chr2_3:48199939-48199958 | Msa0295580:intron | 40.0% | |
| GCACTCAAAACTGTTAAGTG+TGG | + | chr2_3:48200097-48200116 | Msa0295580:intron | 40.0% | |
| CTCAAAACTGTTAAGTGTGG+AGG | + | chr2_3:48200100-48200119 | Msa0295580:intron | 40.0% | |
| AAACTGTTAAGTGTGGAGGA+TGG | + | chr2_3:48200104-48200123 | Msa0295580:intron | 40.0% | |
| ATGTTTCCTTCCATGTGTCT+TGG | - | chr2_3:48200145-48200164 | None:intergenic | 40.0% | |
| !! | TTTGAGGATGGTGGTTGTTT+TGG | - | chr2_3:48200546-48200565 | None:intergenic | 40.0% |
| !! | TGGTTGGTTCGTGGAATATT+AGG | + | chr2_3:48200925-48200944 | Msa0295580:intron | 40.0% |
| AAGAAAGAGAGACCGAAGAT+GGG | - | chr2_3:48201040-48201059 | None:intergenic | 40.0% | |
| CCTCCCAAAGAAAACATCTA+TGG | - | chr2_3:48201102-48201121 | None:intergenic | 40.0% | |
| ! | CCATAGATGTTTTCTTTGGG+AGG | + | chr2_3:48201099-48201118 | Msa0295580:intron | 40.0% |
| CGTATCTAACAAGCTACAAG+AGG | + | chr2_3:48201428-48201447 | Msa0295580:intron | 40.0% | |
| CTCATTCTCATGTCTTGGTA+AGG | - | chr2_3:48201778-48201797 | None:intergenic | 40.0% | |
| AATGCTCTCCATGAATGGTT+CGG | + | chr2_3:48201833-48201852 | Msa0295580:intron | 40.0% | |
| ! | ATCACTTCCAGATGAGTTGA+AGG | + | chr2_3:48201866-48201885 | Msa0295580:intron | 40.0% |
| ACTTAGATAAAGAGGGAGAG+AGG | - | chr2_3:48202205-48202224 | None:intergenic | 40.0% | |
| ATTTGCCTTCTACAGTTGGT+AGG | + | chr2_3:48202268-48202287 | Msa0295580:intron | 40.0% | |
| AACGAGCCTAAATACCCTTA+TGG | - | chr2_3:48202306-48202325 | None:intergenic | 40.0% | |
| GGAGTCATGACTAAAGAATG+AGG | + | chr2_3:48202595-48202614 | Msa0295580:intron | 40.0% | |
| !!! | TTTTGGGACAACTCATGTAC+GGG | + | chr2_3:48202927-48202946 | Msa0295580:intron | 40.0% |
| TCATGGAGGAAAGTCAATAG+AGG | - | chr2_3:48203011-48203030 | None:intergenic | 40.0% | |
| ATCTGACACGAAGTCTTACA+AGG | - | chr2_3:48203060-48203079 | None:intergenic | 40.0% | |
| CTTACTAGTCAAACCTCTTG+GGG | + | chr2_3:48203081-48203100 | Msa0295580:intron | 40.0% | |
| CGCATATATATATCCCCAAG+AGG | - | chr2_3:48203097-48203116 | None:intergenic | 40.0% | |
| TTGGTATATGTCGTGATCGT+AGG | - | chr2_3:48203121-48203140 | None:intergenic | 40.0% | |
| GTTATGTGTGTGTTTGTGTG+TGG | - | chr2_3:48203149-48203168 | None:intergenic | 40.0% | |
| CAACAAAGAGAACCAAGAAG+AGG | - | chr2_3:48203241-48203260 | None:intergenic | 40.0% | |
| AGCCAGAACTTGTGAGAATT+TGG | + | chr2_3:48203867-48203886 | Msa0295580:CDS | 40.0% | |
| AGCCAAATTCTCACAAGTTC+TGG | - | chr2_3:48203872-48203891 | None:intergenic | 40.0% | |
| CAACAAAGAGAACGAGGAAG+AGG | - | chr2_3:48193619-48193638 | None:intergenic | 45.0% | |
| TACGTGCAACAAAGAGAACG+AGG | - | chr2_3:48193625-48193644 | None:intergenic | 45.0% | |
| ACATTCAGGGGACCATGTTT+CGG | + | chr2_3:48194345-48194364 | Msa0295580:CDS | 45.0% | |
| !! | CTGCAGAACCAAAGAGCATT+TGG | + | chr2_3:48194389-48194408 | Msa0295580:CDS | 45.0% |
| GCCACTAACCAAATGCTCTT+TGG | - | chr2_3:48194400-48194419 | None:intergenic | 45.0% | |
| !! | AAGAGCATTTGGTTAGTGGC+AGG | + | chr2_3:48194400-48194419 | Msa0295580:CDS | 45.0% |
| TGTTGATCCGTCTGATGGTT+AGG | + | chr2_3:48195024-48195043 | Msa0295580:intron | 45.0% | |
| TTGACCTTGGCGACATAGAA+TGG | + | chr2_3:48195606-48195625 | Msa0295580:intron | 45.0% | |
| TGACCTTGGCGACATAGAAT+GGG | + | chr2_3:48195607-48195626 | Msa0295580:intron | 45.0% | |
| CTCGAAATGCCAACCTAGTT+GGG | + | chr2_3:48195635-48195654 | Msa0295580:intron | 45.0% | |
| AAAACGACGACATCCCAACT+AGG | - | chr2_3:48195651-48195670 | None:intergenic | 45.0% | |
| AGAGTAAGGACAGACACCAA+GGG | - | chr2_3:48195674-48195693 | None:intergenic | 45.0% | |
| AAGAGTAAGGACAGACACCA+AGG | - | chr2_3:48195675-48195694 | None:intergenic | 45.0% | |
| GCAACGAGGCACAAATTGAA+CGG | + | chr2_3:48196334-48196353 | Msa0295580:intron | 45.0% | |
| TTGCTAGAAGCCAGCTATGA+AGG | + | chr2_3:48196660-48196679 | Msa0295580:intron | 45.0% | |
| ! | ACCGAGGGAGTATAACATCA+AGG | + | chr2_3:48197221-48197240 | Msa0295580:intron | 45.0% |
| CAAGAAACGGACCGATATAG+AGG | - | chr2_3:48198910-48198929 | None:intergenic | 45.0% | |
| CTATATCGGTCCGTTTCTTG+TGG | + | chr2_3:48198910-48198929 | Msa0295580:intron | 45.0% | |
| CTAGCTATTGAAGCTCCCTT+TGG | + | chr2_3:48199019-48199038 | Msa0295580:intron | 45.0% | |
| AGCTATTGAAGCTCCCTTTG+GGG | + | chr2_3:48199021-48199040 | Msa0295580:intron | 45.0% | |
| CAACAAAGAGAACGAGGAAG+AGG | - | chr2_3:48193619-48193638 | None:intergenic | 45.0% | |
| TACGTGCAACAAAGAGAACG+AGG | - | chr2_3:48193625-48193644 | None:intergenic | 45.0% | |
| ! | TTTTTACGCACTACACCCTC+CGG | + | chr2_3:48199737-48199756 | Msa0295580:intron | 45.0% |
| AGCAAGGACTTGTGAGCATT+TGG | + | chr2_3:48199969-48199988 | Msa0295580:CDS | 45.0% | |
| TTCTCCAACACCAAGACACA+TGG | + | chr2_3:48200132-48200151 | Msa0295580:intron | 45.0% | |
| !! | GTGTTAAGTTGGTTGGTTCG+TGG | + | chr2_3:48200916-48200935 | Msa0295580:intron | 45.0% |
| AGAAAGAGAGACCGAAGATG+GGG | - | chr2_3:48201039-48201058 | None:intergenic | 45.0% | |
| CAAGAAAGAGAGACCGAAGA+TGG | - | chr2_3:48201041-48201060 | None:intergenic | 45.0% | |
| !! | TCATGGAGAGCATTCTTGCT+TGG | - | chr2_3:48201827-48201846 | None:intergenic | 45.0% |
| GCAAGAATGCTCTCCATGAA+TGG | + | chr2_3:48201828-48201847 | Msa0295580:intron | 45.0% | |
| !! | TCTCCATGAATGGTTCGGTT+TGG | + | chr2_3:48201838-48201857 | Msa0295580:intron | 45.0% |
| AAGCCAAACCGAACCATTCA+TGG | - | chr2_3:48201844-48201863 | None:intergenic | 45.0% | |
| ACAACATCGACATCCCAACT+AGG | - | chr2_3:48202104-48202123 | None:intergenic | 45.0% | |
| GGAGGAAAGTCAATAGAGGA+GGG | - | chr2_3:48203007-48203026 | None:intergenic | 45.0% | |
| TGGAGGAAAGTCAATAGAGG+AGG | - | chr2_3:48203008-48203027 | None:intergenic | 45.0% | |
| AGGCTTATGCTTCCTCTTCT+TGG | + | chr2_3:48203226-48203245 | Msa0295580:intron | 45.0% | |
| TATAGGGGACCATGCTTTAG+TGG | + | chr2_3:48203898-48203917 | Msa0295580:CDS | 45.0% | |
| ACCAAAGAGAACGCAGTTAG+TGG | + | chr2_3:48203940-48203959 | Msa0295580:CDS | 45.0% | |
| GGATCTTCTCCAACAATGCA+TGG | + | chr2_3:48204011-48204030 | Msa0295580:three_prime_UTR | 45.0% | |
| !! | TGAAAAATTTATTAAAAAAA+GGG | - | chr2_3:48195586-48195605 | None:intergenic | 5.0% |
| !! | ATGAAAAATTTATTAAAAAA+AGG | - | chr2_3:48195587-48195606 | None:intergenic | 5.0% |
| !! | TTCTTTATATATATATATAT+AGG | + | chr2_3:48196634-48196653 | Msa0295580:intron | 5.0% |
| !! | TCTTTATATATATATATATA+GGG | + | chr2_3:48196635-48196654 | Msa0295580:intron | 5.0% |
| !!! | ATTATTATTATGTTTTTTTT+AGG | + | chr2_3:48196934-48196953 | Msa0295580:intron | 5.0% |
| !!! | TTATTATTATGTTTTTTTTA+GGG | + | chr2_3:48196935-48196954 | Msa0295580:intron | 5.0% |
| !!! | TTTCTTTTTTAAAAAAAAAA+AGG | - | chr2_3:48198485-48198504 | None:intergenic | 5.0% |
| !!! | TATTAATACAAATTTAATTT+TGG | + | chr2_3:48199646-48199665 | Msa0295580:intron | 5.0% |
| !!! | TTATTTTTATTTTAAATGTT+TGG | + | chr2_3:48199860-48199879 | Msa0295580:intron | 5.0% |
| !!! | ATTATATTTGAATTTTTTTT+TGG | + | chr2_3:48203443-48203462 | Msa0295580:intron | 5.0% |
| !!! | TTATATTTGAATTTTTTTTT+GGG | + | chr2_3:48203444-48203463 | Msa0295580:intron | 5.0% |
| ATTTGGTTAGTGGCAGGTGC+AGG | + | chr2_3:48194406-48194425 | Msa0295580:CDS | 50.0% | |
| TTTGGTTAGTGGCAGGTGCA+GGG | + | chr2_3:48194407-48194426 | Msa0295580:CDS | 50.0% | |
| GCAGGGATGACTTTCGTTGT+TGG | + | chr2_3:48194424-48194443 | Msa0295580:intron | 50.0% | |
| GATATACAAGAGGGGGGACT+AGG | - | chr2_3:48195557-48195576 | None:intergenic | 50.0% | |
| GACCTTGGCGACATAGAATG+GGG | + | chr2_3:48195608-48195627 | Msa0295580:intron | 50.0% | |
| ACCTTGGCGACATAGAATGG+GGG | + | chr2_3:48195609-48195628 | Msa0295580:intron | 50.0% | |
| ! | CCAACTAGGTTGGCATTTCG+AGG | - | chr2_3:48195637-48195656 | None:intergenic | 50.0% |
| CCTCGAAATGCCAACCTAGT+TGG | + | chr2_3:48195634-48195653 | Msa0295580:intron | 50.0% | |
| GGAAATCACACCTTGAGGTG+TGG | - | chr2_3:48196700-48196719 | None:intergenic | 50.0% | |
| !! | CTTTGAGTTGCGGCGTAACA+AGG | - | chr2_3:48197055-48197074 | None:intergenic | 50.0% |
| GAAACGGACCGATATAGAGG+TGG | - | chr2_3:48198907-48198926 | None:intergenic | 50.0% | |
| CAGCTAGCATCTGTGAAGCA+TGG | - | chr2_3:48200012-48200031 | None:intergenic | 50.0% | |
| ! | CCTTCCATGTGTCTTGGTGT+TGG | - | chr2_3:48200139-48200158 | None:intergenic | 50.0% |
| CCAACACCAAGACACATGGA+AGG | + | chr2_3:48200136-48200155 | Msa0295580:intron | 50.0% | |
| AAGTGCGCACCCGACTTAAA+AGG | - | chr2_3:48200863-48200882 | None:intergenic | 50.0% | |
| !! | TCTCTAGAGTTTGGCGGCAT+AGG | + | chr2_3:48202055-48202074 | Msa0295580:intron | 50.0% |
| TAGAGTTTGGCGGCATAGGA+TGG | + | chr2_3:48202059-48202078 | Msa0295580:intron | 50.0% | |
| GGCATAGGATGGAGGTTTCT+CGG | + | chr2_3:48202070-48202089 | Msa0295580:intron | 50.0% | |
| GCATAGGATGGAGGTTTCTC+GGG | + | chr2_3:48202071-48202090 | Msa0295580:intron | 50.0% | |
| CATAGGATGGAGGTTTCTCG+GGG | + | chr2_3:48202072-48202091 | Msa0295580:intron | 50.0% | |
| !! | ACAAGGTGGAGGAGCATTCT+TGG | - | chr2_3:48202172-48202191 | None:intergenic | 50.0% |
| ! | AGAGAGGCACAAAGGTGACA+AGG | - | chr2_3:48202189-48202208 | None:intergenic | 50.0% |
| ! | AAAGAGGGAGAGAGGCACAA+AGG | - | chr2_3:48202197-48202216 | None:intergenic | 50.0% |
| GTGTTTGTGTGTGGTGTGGT+TGG | - | chr2_3:48203140-48203159 | None:intergenic | 50.0% | |
| GTGTGTGTTTGTGTGTGGTG+TGG | - | chr2_3:48203144-48203163 | None:intergenic | 50.0% | |
| GTGTCACAGCCACTAAAGCA+TGG | - | chr2_3:48203910-48203929 | None:intergenic | 50.0% | |
| GCCACTAACTGCGTTCTCTT+TGG | - | chr2_3:48203944-48203963 | None:intergenic | 50.0% | |
| AAGAGAACGCAGTTAGTGGC+AGG | + | chr2_3:48203944-48203963 | Msa0295580:CDS | 50.0% | |
| ACCCCCATTCTATGTCGCCA+AGG | - | chr2_3:48195613-48195632 | None:intergenic | 55.0% | |
| CGACGACATCCCAACTAGGT+TGG | - | chr2_3:48195647-48195666 | None:intergenic | 55.0% | |
| !! | GGGATGTCGTCGTTTTCCCT+TGG | + | chr2_3:48195655-48195674 | Msa0295580:intron | 55.0% |
| AAACCAGCGGTGGAATCGGT+AGG | - | chr2_3:48197009-48197028 | None:intergenic | 55.0% | |
| TTGCGGCGTAACAAGGACCA+TGG | - | chr2_3:48197048-48197067 | None:intergenic | 55.0% | |
| AGTTTGGCGGCATAGGATGG+AGG | + | chr2_3:48202062-48202081 | Msa0295580:intron | 55.0% | |
| ! | TCTCGGGGTGTCAACCTAGT+TGG | + | chr2_3:48202087-48202106 | Msa0295580:intron | 55.0% |
| ! | CTCGGGGTGTCAACCTAGTT+GGG | + | chr2_3:48202088-48202107 | Msa0295580:intron | 55.0% |
| GCACAAAGGTGACAAGGTGG+AGG | - | chr2_3:48202183-48202202 | None:intergenic | 55.0% | |
| GAGGCACAAAGGTGACAAGG+TGG | - | chr2_3:48202186-48202205 | None:intergenic | 55.0% | |
| GCAGGGATGACTTTCGCTGT+TGG | + | chr2_3:48203968-48203987 | Msa0295580:CDS | 55.0% | |
| !! | ATGCCTACCGATTCCACCGC+TGG | + | chr2_3:48197003-48197022 | Msa0295580:intron | 60.0% |
| TGCATGGGGACGTGTACGAG+TGG | - | chr2_3:48198844-48198863 | None:intergenic | 60.0% | |
| ACGCAGTTAGTGGCAGGTGC+AGG | + | chr2_3:48203950-48203969 | Msa0295580:CDS | 60.0% | |
| CGCAGTTAGTGGCAGGTGCA+GGG | + | chr2_3:48203951-48203970 | Msa0295580:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 48193472 | 48204217 | 48193472 | ID=Msa0295580;Name=Msa0295580 |
| chr2_3 | mRNA | 48193472 | 48204217 | 48193472 | ID=Msa0295580-mRNA-1;Parent=Msa0295580;Name=Msa0295580-mRNA-1;_AED=0.27;_eAED=0.27;_QI=112|0.33|0.5|1|0|0|4|209|158 |
| chr2_3 | exon | 48193472 | 48193641 | 48193472 | ID=Msa0295580-mRNA-1:exon:15116;Parent=Msa0295580-mRNA-1 |
| chr2_3 | exon | 48194298 | 48194438 | 48194298 | ID=Msa0295580-mRNA-1:exon:15117;Parent=Msa0295580-mRNA-1 |
| chr2_3 | exon | 48199950 | 48200066 | 48199950 | ID=Msa0295580-mRNA-1:exon:15118;Parent=Msa0295580-mRNA-1 |
| chr2_3 | exon | 48203848 | 48204217 | 48203848 | ID=Msa0295580-mRNA-1:exon:15119;Parent=Msa0295580-mRNA-1 |
| chr2_3 | five_prime_UTR | 48193472 | 48193583 | 48193472 | ID=Msa0295580-mRNA-1:five_prime_utr;Parent=Msa0295580-mRNA-1 |
| chr2_3 | CDS | 48193584 | 48193641 | 48193584 | ID=Msa0295580-mRNA-1:cds;Parent=Msa0295580-mRNA-1 |
| chr2_3 | CDS | 48194298 | 48194438 | 48194298 | ID=Msa0295580-mRNA-1:cds;Parent=Msa0295580-mRNA-1 |
| chr2_3 | CDS | 48199950 | 48200066 | 48199950 | ID=Msa0295580-mRNA-1:cds;Parent=Msa0295580-mRNA-1 |
| chr2_3 | CDS | 48203848 | 48204008 | 48203848 | ID=Msa0295580-mRNA-1:cds;Parent=Msa0295580-mRNA-1 |
| chr2_3 | three_prime_UTR | 48204009 | 48204217 | 48204009 | ID=Msa0295580-mRNA-1:three_prime_utr;Parent=Msa0295580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
