AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0132620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0132620 MtrunA17_Chr1g0201791 75.166 302 28 6 1 300 1 257 1.41e-60 193
Msa0132620 MtrunA17_Chr6g0464351 70.330 91 27 0 209 299 20 110 4.58e-19 80.9
Msa0132620 MtrunA17_Chr6g0472131 69.231 91 25 1 209 299 20 107 1.14e-16 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 113 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTCTCAATAAAATTCTT+TGG 0.247733 1_3:-63836511 Msa0132620:three_prime_UTR
AAGAAGAAACACCATTTCTT+TGG 0.265818 1_3:-63836824 Msa0132620:CDS
CTTATAATTAATTATGCTTT+TGG 0.268011 1_3:-63836723 Msa0132620:three_prime_UTR
TTGTGCCTGTGAGCATTCTC+TGG 0.272448 1_3:+63836956 None:intergenic
CCATGAGCATCATGAGAAAA+AGG 0.283151 1_3:-63836879 Msa0132620:CDS
GGCGGATATGGTGGTGGTTA+TGG 0.297675 1_3:-63838249 Msa0132620:CDS
CCAGTTTGCTTTGAGTGGTT+TGG 0.300019 1_3:-63836667 Msa0132620:three_prime_UTR
ACCACCACCGGTGGTGGTTT+TGG 0.301983 1_3:+63838065 None:intergenic
TCCGCCACCCGTGGTTGTTT+TGG 0.307495 1_3:+63838266 None:intergenic
ACAACCACGGGTGGCGGATA+TGG 0.315139 1_3:-63838261 Msa0132620:CDS
GGCGGCTACGGCGGTGGTTA+TGG 0.318700 1_3:-63838348 Msa0132620:CDS
GGCGGCTACGGTGGTGGTTA+TGG 0.321562 1_3:-63838150 Msa0132620:CDS
GCCGCCACCAGTGGTTGTTT+TGG 0.330964 1_3:+63838365 None:intergenic
GGCGGCTACGGTGGTGGATA+TGG 0.331422 1_3:-63838099 Msa0132620:CDS
GGTGGCTACGGTGGTGGTTA+TGG 0.331534 1_3:-63838300 Msa0132620:CDS
CATGAGCATCTTGGTGAGTT+AGG 0.335349 1_3:-63837991 Msa0132620:CDS
ATAAGCATACAAGCATATTA+TGG 0.340474 1_3:-63836771 Msa0132620:three_prime_UTR
GGCGGCTACGGTGGTGGTTA+TGG 0.343719 1_3:-63838201 Msa0132620:CDS
ACAGGTGATGACTATGATTC+TGG 0.353087 1_3:-63838546 Msa0132620:CDS
ACCACCACCGGTGGTGGTTA+TGG 0.357161 1_3:-63838060 Msa0132620:CDS
GTAGCCACCACCAGTGGTTT+TGG 0.366481 1_3:+63838314 None:intergenic
GAGGAAGAAGAAGAAGTTCA+TGG 0.387151 1_3:-63836848 Msa0132620:CDS
TCATATGGTAATGACAATTC+TGG 0.390159 1_3:-63838462 Msa0132620:CDS
GAGTTAGGTGCTGCAGCTGC+TGG 0.393240 1_3:-63837976 Msa0132620:CDS
CCAAACCACTCAAAGCAAAC+TGG 0.402796 1_3:+63836667 None:intergenic
ACTGATAAGTACACAATATA+CGG 0.407792 1_3:-63836588 Msa0132620:three_prime_UTR
GAAGCAGCTGCAGTGGGATC+TGG 0.415672 1_3:-63836914 Msa0132620:CDS
TACTCTAATAATGAAACATC+TGG 0.429220 1_3:-63838399 Msa0132620:CDS
GGTTACAATAAAACATCATA+TGG 0.436340 1_3:-63838477 Msa0132620:CDS
TCTGGTGGTGACTATGAAAC+TGG 0.450209 1_3:-63838444 Msa0132620:CDS
ATCTTCCAGTTTGCTTTGAG+TGG 0.452238 1_3:-63836672 Msa0132620:three_prime_UTR
TAACCACTGTCAGTGTCTAT+AGG 0.455188 1_3:+63838588 None:intergenic
ACTGGTGGCGGCTACGGCGG+TGG 0.456265 1_3:-63838354 Msa0132620:CDS
ACAACCACTGGTGGCGGCTA+CGG 0.469364 1_3:-63838360 Msa0132620:CDS
ACTGGTGGCGGCTACGGTGG+TGG 0.471209 1_3:-63838156 Msa0132620:CDS
ACTGGAGGCGGCTACGGTGG+TGG 0.471438 1_3:-63838105 Msa0132620:CDS
ACCACTGGCGGCTACGGTGG+TGG 0.476187 1_3:-63838207 Msa0132620:CDS
CATATGTTCAGCCAAAGAAA+TGG 0.483204 1_3:+63836813 None:intergenic
ACAACCACTGGTGGCGGCTA+CGG 0.484339 1_3:-63838162 Msa0132620:CDS
TACAATGATGACCAGCCATC+TGG 0.494200 1_3:-63838504 Msa0132620:CDS
ACCAAAACAACCACGGGTGG+CGG 0.495591 1_3:-63838267 Msa0132620:CDS
CTTGGTGTCATATAGATGTA+TGG 0.495626 1_3:-63836631 Msa0132620:three_prime_UTR
AGTTGCAGAAGCAGCTGCAG+TGG 0.498157 1_3:-63836921 Msa0132620:CDS
ACCAAAACCACCACCGGTGG+TGG 0.498197 1_3:-63838066 Msa0132620:CDS
GCCAAAACAACCACTGGTGG+CGG 0.500275 1_3:-63838366 Msa0132620:CDS
AAAACAACCACTGGCGGCTA+CGG 0.502509 1_3:-63838213 Msa0132620:CDS
TTTGGAGAATGTTTCCAGCT+TGG 0.505186 1_3:-63836649 Msa0132620:three_prime_UTR
ACTGGTGGTGGCTACGGTGG+TGG 0.506091 1_3:-63838306 Msa0132620:CDS
TGTGCCTGTGAGCATTCTCT+GGG 0.507199 1_3:+63836957 None:intergenic
CACAGCAAACATGAGCATCT+TGG 0.507345 1_3:-63838000 Msa0132620:CDS
CATCATCATGCTTCTTGTGA+TGG 0.509136 1_3:+63838622 None:intergenic
AACAAAACATCATACTCTAC+AGG 0.515763 1_3:-63838564 Msa0132620:CDS
ACCATAACCACCACCGGTGG+TGG 0.518071 1_3:+63838059 None:intergenic
ACAACCACTGGAGGCGGCTA+CGG 0.519220 1_3:-63838111 Msa0132620:CDS
GACACCAAAACCACTGGTGG+TGG 0.521255 1_3:-63838318 Msa0132620:CDS
ACCACGGGTGGCGGATATGG+TGG 0.535025 1_3:-63838258 Msa0132620:CDS
AAAACCACTGGTGGTGGCTA+CGG 0.535946 1_3:-63838312 Msa0132620:CDS
GCAGCTGCAGTGGGATCTGG+TGG 0.536922 1_3:-63836911 Msa0132620:CDS
AATGAAACATCTGGTGGCTA+TGG 0.540775 1_3:-63838390 Msa0132620:CDS
ACTAAAACAACCACTGGTGG+CGG 0.542116 1_3:-63838168 Msa0132620:CDS
ACCACTGGTGGCGGCTACGG+TGG 0.543033 1_3:-63838159 Msa0132620:CDS
GATGGAAGAGGCCACGGCTA+CGG 0.545278 1_3:+63838640 None:intergenic
GACTCTGACACCAAAACCAC+TGG 0.545560 1_3:-63838324 Msa0132620:CDS
GTTGCAGAAGCAGCTGCAGT+GGG 0.546096 1_3:-63836920 Msa0132620:CDS
TTTCTCATGATGCTCATGGA+AGG 0.551185 1_3:+63836883 None:intergenic
ACCACTGGTGGCGGCTACGG+CGG 0.552249 1_3:-63838357 Msa0132620:CDS
ACGGGTGGCGGATATGGTGG+TGG 0.554084 1_3:-63838255 Msa0132620:CDS
TGTAACCACCACCAGATGGC+TGG 0.555821 1_3:+63838493 None:intergenic
AGCATGATGATGATGATAGT+AGG 0.556478 1_3:-63838611 Msa0132620:CDS
ACTAAAACAACCACTGGAGG+CGG 0.561518 1_3:-63838117 Msa0132620:CDS
ACCACTGGAGGCGGCTACGG+TGG 0.561554 1_3:-63838108 Msa0132620:CDS
CATGCTTCTTGTGATGGAAG+AGG 0.565809 1_3:+63838628 None:intergenic
ACAACCACTGGCGGCTACGG+TGG 0.567166 1_3:-63838210 Msa0132620:CDS
TCTGACACTAAAACAACCAC+TGG 0.570147 1_3:-63838123 Msa0132620:CDS
TGATGATGTTGATTATAAGA+AGG 0.572766 1_3:-63838034 Msa0132620:CDS
ACCACTGGTGGTGGCTACGG+TGG 0.575768 1_3:-63838309 Msa0132620:CDS
ACCACCGTAGCCGCCTCCAG+TGG 0.576587 1_3:+63838107 None:intergenic
TTAGGTGCTGCAGCTGCTGG+TGG 0.580522 1_3:-63837973 Msa0132620:CDS
TCTGACACTAAAACAACCAC+TGG 0.581882 1_3:-63838222 Msa0132620:CDS
TCTGACACTAAAACAACCAC+TGG 0.583853 1_3:-63838174 Msa0132620:CDS
TCTGACACCAAAACAACCAC+GGG 0.584515 1_3:-63838273 Msa0132620:CDS
ACATCTATATGACACCAAGC+TGG 0.586244 1_3:+63836635 None:intergenic
TCTGACACCAAAACCACCAC+CGG 0.597416 1_3:-63838072 Msa0132620:CDS
GACACTAAAACAACCACTGG+TGG 0.602888 1_3:-63838171 Msa0132620:CDS
ACCACCATATCCGCCACCCG+TGG 0.603586 1_3:+63838257 None:intergenic
CAGCTGCAGTGGGATCTGGT+GGG 0.605425 1_3:-63836910 Msa0132620:CDS
TCTTGTGATGGAAGAGGCCA+CGG 0.606734 1_3:+63838634 None:intergenic
GACACTAAAACAACCACTGG+CGG 0.607430 1_3:-63838219 Msa0132620:CDS
TGTCATATAGATGTATGGTA+TGG 0.608599 1_3:-63836626 Msa0132620:three_prime_UTR
ATCACGACCATAACCACCAC+CGG 0.609000 1_3:+63838053 None:intergenic
TGATGTTGATTATAAGAAGG+AGG 0.610955 1_3:-63838031 Msa0132620:CDS
TATGGTGCCAAAACAACCAC+TGG 0.612429 1_3:-63838372 Msa0132620:CDS
TCTAATAATGAAACATCTGG+TGG 0.616695 1_3:-63838396 Msa0132620:CDS
CTCTGACACCAAAACAACCA+CGG 0.619600 1_3:-63838274 Msa0132620:CDS
ACCACCGTAGCCGCCACCAG+TGG 0.622033 1_3:+63838158 None:intergenic
TTATTGTAACCACCACCAGA+TGG 0.622037 1_3:+63838489 None:intergenic
ACCACCACCGTAGCCGCCAG+TGG 0.623805 1_3:+63838206 None:intergenic
ACGGTTCTCTTCATCAGACA+TGG 0.625188 1_3:+63838659 None:intergenic
GACACTAAAACAACCACTGG+AGG 0.626777 1_3:-63838120 Msa0132620:CDS
ACCGCCGTAGCCGCCACCAG+TGG 0.626903 1_3:+63838356 None:intergenic
GATGACCAGCCATCTGGTGG+TGG 0.627887 1_3:-63838498 Msa0132620:CDS
GACACCAAAACAACCACGGG+TGG 0.630084 1_3:-63838270 Msa0132620:CDS
CAAGATGCTCATGTTTGCTG+TGG 0.630178 1_3:+63838001 None:intergenic
GACACCAAAACCACCACCGG+TGG 0.634543 1_3:-63838069 Msa0132620:CDS
GATGAAGAGAACCGTAGCCG+TGG 0.635065 1_3:-63838651 Msa0132620:CDS
ACCACCGTAGCCACCACCAG+TGG 0.645976 1_3:+63838308 None:intergenic
AAGACCCAGAGAATGCTCAC+AGG 0.646034 1_3:-63836961 Msa0132620:CDS
TCTGACACCAAAACCACTGG+TGG 0.658393 1_3:-63838321 Msa0132620:CDS
GGTGCCAAAACAACCACTGG+TGG 0.667985 1_3:-63838369 Msa0132620:CDS
ACGACCATAACCACCACCGG+TGG 0.697842 1_3:+63838056 None:intergenic
AATGATGACCAGCCATCTGG+TGG 0.714048 1_3:-63838501 Msa0132620:CDS
TATGGTAATGACAATTCTGG+TGG 0.722206 1_3:-63838459 Msa0132620:CDS
AGGCCTATAGACACTGACAG+TGG 0.729201 1_3:-63838591 Msa0132620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATATAAAAAAAATA+AGG + chr1_3:63837593-63837612 None:intergenic 0.0%
!!! TATTTTTATTTTTATTTTTT+TGG - chr1_3:63837933-63837952 Msa0132620:intron 0.0%
!! AAAAAAATATAAAAAAAATA+AGG + chr1_3:63837593-63837612 None:intergenic 0.0%
!!! TATTTTTATTTTTATTTTTT+TGG - chr1_3:63837933-63837952 Msa0132620:intron 0.0%
!! AAAAAATTAATTACAAAGTT+TGG + chr1_3:63837891-63837910 None:intergenic 10.0%
!! AAAAAATTAATTACAAAGTT+TGG + chr1_3:63837891-63837910 None:intergenic 10.0%
!! GAAACAAATAACAAAAATAT+GGG + chr1_3:63837274-63837293 None:intergenic 15.0%
!! AGAAACAAATAACAAAAATA+TGG + chr1_3:63837275-63837294 None:intergenic 15.0%
!!! AATTATTCAAATGTTTTGTA+AGG + chr1_3:63837375-63837394 None:intergenic 15.0%
!!! TACTTTCAAATTTTCAATTT+TGG + chr1_3:63838124-63838143 None:intergenic 15.0%
!!! CTTATAATTAATTATGCTTT+TGG - chr1_3:63838443-63838462 Msa0132620:CDS 15.0%
!! GAAACAAATAACAAAAATAT+GGG + chr1_3:63837274-63837293 None:intergenic 15.0%
!! AGAAACAAATAACAAAAATA+TGG + chr1_3:63837275-63837294 None:intergenic 15.0%
!!! AATTATTCAAATGTTTTGTA+AGG + chr1_3:63837375-63837394 None:intergenic 15.0%
!!! TACTTTCAAATTTTCAATTT+TGG + chr1_3:63838124-63838143 None:intergenic 15.0%
!!! CTTATAATTAATTATGCTTT+TGG - chr1_3:63838443-63838462 Msa0132620:CDS 15.0%
!!! AATCAATAAATTTTCTCTGA+TGG - chr1_3:63837325-63837344 Msa0132620:intron 20.0%
!! AATGCAATGTTTAAATACTA+CGG + chr1_3:63837791-63837810 None:intergenic 20.0%
!!! TTAATGCAATTTTCCTATTA+TGG + chr1_3:63837836-63837855 None:intergenic 20.0%
!! TTTGTCTCAATAAAATTCTT+TGG - chr1_3:63838655-63838674 Msa0132620:CDS 20.0%
!!! AATCAATAAATTTTCTCTGA+TGG - chr1_3:63837325-63837344 Msa0132620:intron 20.0%
!! AATGCAATGTTTAAATACTA+CGG + chr1_3:63837791-63837810 None:intergenic 20.0%
!!! TTAATGCAATTTTCCTATTA+TGG + chr1_3:63837836-63837855 None:intergenic 20.0%
!! TTTGTCTCAATAAAATTCTT+TGG - chr1_3:63838655-63838674 Msa0132620:CDS 20.0%
! GGTTACAATAAAACATCATA+TGG - chr1_3:63836689-63836708 Msa0132620:three_prime_UTR 25.0%
! TACTCTAATAATGAAACATC+TGG - chr1_3:63836767-63836786 Msa0132620:three_prime_UTR 25.0%
!! TGATGATGTTGATTATAAGA+AGG - chr1_3:63837132-63837151 Msa0132620:intron 25.0%
! TAAATAGCAATTAGGAGTAA+TGG + chr1_3:63837245-63837264 None:intergenic 25.0%
! GACTCATATTCATTAATTAG+TGG - chr1_3:63837706-63837725 Msa0132620:intron 25.0%
! TTCCTATTATGGAAATCTTA+GGG + chr1_3:63837825-63837844 None:intergenic 25.0%
! TTTCCTATTATGGAAATCTT+AGG + chr1_3:63837826-63837845 None:intergenic 25.0%
!!! TATTTTTTTGGTACAAGAAG+AGG - chr1_3:63837945-63837964 Msa0132620:intron 25.0%
!!! ATTTTTTTGGTACAAGAAGA+GGG - chr1_3:63837946-63837965 Msa0132620:intron 25.0%
! AATAAAATACGCAAGAACTT+GGG + chr1_3:63837977-63837996 None:intergenic 25.0%
! AAATAAAATACGCAAGAACT+TGG + chr1_3:63837978-63837997 None:intergenic 25.0%
! TGTAAAAATTCGATCTTGAT+TGG - chr1_3:63838005-63838024 Msa0132620:CDS 25.0%
! TTACGCTATAAATAGACATA+GGG - chr1_3:63838075-63838094 Msa0132620:CDS 25.0%
! ATAAGCATACAAGCATATTA+TGG - chr1_3:63838395-63838414 Msa0132620:CDS 25.0%
! ACTGATAAGTACACAATATA+CGG - chr1_3:63838578-63838597 Msa0132620:CDS 25.0%
! GGTTACAATAAAACATCATA+TGG - chr1_3:63836689-63836708 Msa0132620:three_prime_UTR 25.0%
! TACTCTAATAATGAAACATC+TGG - chr1_3:63836767-63836786 Msa0132620:three_prime_UTR 25.0%
!! TGATGATGTTGATTATAAGA+AGG - chr1_3:63837132-63837151 Msa0132620:intron 25.0%
! TAAATAGCAATTAGGAGTAA+TGG + chr1_3:63837245-63837264 None:intergenic 25.0%
! GACTCATATTCATTAATTAG+TGG - chr1_3:63837706-63837725 Msa0132620:intron 25.0%
! TTCCTATTATGGAAATCTTA+GGG + chr1_3:63837825-63837844 None:intergenic 25.0%
! TTTCCTATTATGGAAATCTT+AGG + chr1_3:63837826-63837845 None:intergenic 25.0%
!!! TATTTTTTTGGTACAAGAAG+AGG - chr1_3:63837945-63837964 Msa0132620:intron 25.0%
!!! ATTTTTTTGGTACAAGAAGA+GGG - chr1_3:63837946-63837965 Msa0132620:intron 25.0%
! AATAAAATACGCAAGAACTT+GGG + chr1_3:63837977-63837996 None:intergenic 25.0%
! AAATAAAATACGCAAGAACT+TGG + chr1_3:63837978-63837997 None:intergenic 25.0%
! TGTAAAAATTCGATCTTGAT+TGG - chr1_3:63838005-63838024 Msa0132620:CDS 25.0%
! TTACGCTATAAATAGACATA+GGG - chr1_3:63838075-63838094 Msa0132620:CDS 25.0%
! ATAAGCATACAAGCATATTA+TGG - chr1_3:63838395-63838414 Msa0132620:CDS 25.0%
! ACTGATAAGTACACAATATA+CGG - chr1_3:63838578-63838597 Msa0132620:CDS 25.0%
AACAAAACATCATACTCTAC+AGG - chr1_3:63836602-63836621 Msa0132620:three_prime_UTR 30.0%
! TCATATGGTAATGACAATTC+TGG - chr1_3:63836704-63836723 Msa0132620:three_prime_UTR 30.0%
TCTAATAATGAAACATCTGG+TGG - chr1_3:63836770-63836789 Msa0132620:three_prime_UTR 30.0%
! TGATGTTGATTATAAGAAGG+AGG - chr1_3:63837135-63837154 Msa0132620:intron 30.0%
GGAGAGATTAAATAGCAATT+AGG + chr1_3:63837253-63837272 None:intergenic 30.0%
! TTCACTAGATGTTAGTTTAG+TGG + chr1_3:63837500-63837519 None:intergenic 30.0%
AACATCCAACCAAATATGAA+CGG + chr1_3:63838032-63838051 None:intergenic 30.0%
GTTACGCTATAAATAGACAT+AGG - chr1_3:63838074-63838093 Msa0132620:CDS 30.0%
TGAGAAAAAGGAAACAAAAG+AGG - chr1_3:63838299-63838318 Msa0132620:CDS 30.0%
AAGAAGAAACACCATTTCTT+TGG - chr1_3:63838342-63838361 Msa0132620:CDS 30.0%
TGTCATATAGATGTATGGTA+TGG - chr1_3:63838540-63838559 Msa0132620:CDS 30.0%
AACAAAACATCATACTCTAC+AGG - chr1_3:63836602-63836621 Msa0132620:three_prime_UTR 30.0%
! TCATATGGTAATGACAATTC+TGG - chr1_3:63836704-63836723 Msa0132620:three_prime_UTR 30.0%
TCTAATAATGAAACATCTGG+TGG - chr1_3:63836770-63836789 Msa0132620:three_prime_UTR 30.0%
! TGATGTTGATTATAAGAAGG+AGG - chr1_3:63837135-63837154 Msa0132620:intron 30.0%
GGAGAGATTAAATAGCAATT+AGG + chr1_3:63837253-63837272 None:intergenic 30.0%
! TTCACTAGATGTTAGTTTAG+TGG + chr1_3:63837500-63837519 None:intergenic 30.0%
AACATCCAACCAAATATGAA+CGG + chr1_3:63838032-63838051 None:intergenic 30.0%
GTTACGCTATAAATAGACAT+AGG - chr1_3:63838074-63838093 Msa0132620:CDS 30.0%
TGAGAAAAAGGAAACAAAAG+AGG - chr1_3:63838299-63838318 Msa0132620:CDS 30.0%
AAGAAGAAACACCATTTCTT+TGG - chr1_3:63838342-63838361 Msa0132620:CDS 30.0%
TGTCATATAGATGTATGGTA+TGG - chr1_3:63838540-63838559 Msa0132620:CDS 30.0%
! AGCATGATGATGATGATAGT+AGG - chr1_3:63836555-63836574 Msa0132620:three_prime_UTR 35.0%
! TATGGTAATGACAATTCTGG+TGG - chr1_3:63836707-63836726 Msa0132620:three_prime_UTR 35.0%
AATGATTCTCTCAAACATCG+TGG + chr1_3:63837750-63837769 None:intergenic 35.0%
! TGCATTAACCACTTTGTTGT+TGG - chr1_3:63837848-63837867 Msa0132620:intron 35.0%
TGTAATCTCCAACAACAAAG+TGG + chr1_3:63837859-63837878 None:intergenic 35.0%
TTGATTGGACCGTTCATATT+TGG - chr1_3:63838020-63838039 Msa0132620:CDS 35.0%
GTTCATATTTGGTTGGATGT+TGG - chr1_3:63838031-63838050 Msa0132620:CDS 35.0%
ATATTTGGTTGGATGTTGGT+AGG - chr1_3:63838035-63838054 Msa0132620:CDS 35.0%
CATATGTTCAGCCAAAGAAA+TGG + chr1_3:63838356-63838375 None:intergenic 35.0%
!! CTTGGTGTCATATAGATGTA+TGG - chr1_3:63838535-63838554 Msa0132620:CDS 35.0%
! AGCATGATGATGATGATAGT+AGG - chr1_3:63836555-63836574 Msa0132620:three_prime_UTR 35.0%
! TATGGTAATGACAATTCTGG+TGG - chr1_3:63836707-63836726 Msa0132620:three_prime_UTR 35.0%
AATGATTCTCTCAAACATCG+TGG + chr1_3:63837750-63837769 None:intergenic 35.0%
! TGCATTAACCACTTTGTTGT+TGG - chr1_3:63837848-63837867 Msa0132620:intron 35.0%
TGTAATCTCCAACAACAAAG+TGG + chr1_3:63837859-63837878 None:intergenic 35.0%
TTGATTGGACCGTTCATATT+TGG - chr1_3:63838020-63838039 Msa0132620:CDS 35.0%
GTTCATATTTGGTTGGATGT+TGG - chr1_3:63838031-63838050 Msa0132620:CDS 35.0%
ATATTTGGTTGGATGTTGGT+AGG - chr1_3:63838035-63838054 Msa0132620:CDS 35.0%
CATATGTTCAGCCAAAGAAA+TGG + chr1_3:63838356-63838375 None:intergenic 35.0%
!! CTTGGTGTCATATAGATGTA+TGG - chr1_3:63838535-63838554 Msa0132620:CDS 35.0%
CATCATCATGCTTCTTGTGA+TGG + chr1_3:63836547-63836566 None:intergenic 40.0%
TAACCACTGTCAGTGTCTAT+AGG + chr1_3:63836581-63836600 None:intergenic 40.0%
ACAGGTGATGACTATGATTC+TGG - chr1_3:63836620-63836639 Msa0132620:three_prime_UTR 40.0%
TTATTGTAACCACCACCAGA+TGG + chr1_3:63836680-63836699 None:intergenic 40.0%
AATGAAACATCTGGTGGCTA+TGG - chr1_3:63836776-63836795 Msa0132620:three_prime_UTR 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_3:63836944-63836963 Msa0132620:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_3:63836944-63836963 Msa0132620:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_3:63836944-63836963 Msa0132620:CDS 40.0%
GAGTCATGCTCAACAAGATT+AGG + chr1_3:63837691-63837710 None:intergenic 40.0%
CGCCCTAAGATTTCCATAAT+AGG - chr1_3:63837820-63837839 Msa0132620:intron 40.0%
TTGGACCGTTCATATTTGGT+TGG - chr1_3:63838024-63838043 Msa0132620:CDS 40.0%
TTTCTCATGATGCTCATGGA+AGG + chr1_3:63838286-63838305 None:intergenic 40.0%
! CCTTTTTCTCATGATGCTCA+TGG + chr1_3:63838290-63838309 None:intergenic 40.0%
CCATGAGCATCATGAGAAAA+AGG - chr1_3:63838287-63838306 Msa0132620:CDS 40.0%
GAGGAAGAAGAAGAAGTTCA+TGG - chr1_3:63838318-63838337 Msa0132620:CDS 40.0%
! ATCTTCCAGTTTGCTTTGAG+TGG - chr1_3:63838494-63838513 Msa0132620:CDS 40.0%
TTTGGAGAATGTTTCCAGCT+TGG - chr1_3:63838517-63838536 Msa0132620:CDS 40.0%
ACATCTATATGACACCAAGC+TGG + chr1_3:63838534-63838553 None:intergenic 40.0%
CATCATCATGCTTCTTGTGA+TGG + chr1_3:63836547-63836566 None:intergenic 40.0%
TAACCACTGTCAGTGTCTAT+AGG + chr1_3:63836581-63836600 None:intergenic 40.0%
ACAGGTGATGACTATGATTC+TGG - chr1_3:63836620-63836639 Msa0132620:three_prime_UTR 40.0%
TTATTGTAACCACCACCAGA+TGG + chr1_3:63836680-63836699 None:intergenic 40.0%
AATGAAACATCTGGTGGCTA+TGG - chr1_3:63836776-63836795 Msa0132620:three_prime_UTR 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_3:63836944-63836963 Msa0132620:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_3:63836944-63836963 Msa0132620:CDS 40.0%
TCTGACACTAAAACAACCAC+TGG - chr1_3:63836944-63836963 Msa0132620:CDS 40.0%
GAGTCATGCTCAACAAGATT+AGG + chr1_3:63837691-63837710 None:intergenic 40.0%
CGCCCTAAGATTTCCATAAT+AGG - chr1_3:63837820-63837839 Msa0132620:intron 40.0%
TTGGACCGTTCATATTTGGT+TGG - chr1_3:63838024-63838043 Msa0132620:CDS 40.0%
TTTCTCATGATGCTCATGGA+AGG + chr1_3:63838286-63838305 None:intergenic 40.0%
! CCTTTTTCTCATGATGCTCA+TGG + chr1_3:63838290-63838309 None:intergenic 40.0%
CCATGAGCATCATGAGAAAA+AGG - chr1_3:63838287-63838306 Msa0132620:CDS 40.0%
GAGGAAGAAGAAGAAGTTCA+TGG - chr1_3:63838318-63838337 Msa0132620:CDS 40.0%
! ATCTTCCAGTTTGCTTTGAG+TGG - chr1_3:63838494-63838513 Msa0132620:CDS 40.0%
TTTGGAGAATGTTTCCAGCT+TGG - chr1_3:63838517-63838536 Msa0132620:CDS 40.0%
ACATCTATATGACACCAAGC+TGG + chr1_3:63838534-63838553 None:intergenic 40.0%
! CATGCTTCTTGTGATGGAAG+AGG + chr1_3:63836541-63836560 None:intergenic 45.0%
TACAATGATGACCAGCCATC+TGG - chr1_3:63836662-63836681 Msa0132620:three_prime_UTR 45.0%
! TCTGGTGGTGACTATGAAAC+TGG - chr1_3:63836722-63836741 Msa0132620:three_prime_UTR 45.0%
! TATGGTGCCAAAACAACCAC+TGG - chr1_3:63836794-63836813 Msa0132620:three_prime_UTR 45.0%
CTCTGACACCAAAACAACCA+CGG - chr1_3:63836892-63836911 Msa0132620:CDS 45.0%
TCTGACACCAAAACAACCAC+GGG - chr1_3:63836893-63836912 Msa0132620:CDS 45.0%
GACACTAAAACAACCACTGG+CGG - chr1_3:63836947-63836966 Msa0132620:CDS 45.0%
GACACTAAAACAACCACTGG+TGG - chr1_3:63836947-63836966 Msa0132620:CDS 45.0%
ACTAAAACAACCACTGGTGG+CGG - chr1_3:63836998-63837017 Msa0132620:intron 45.0%
GACACTAAAACAACCACTGG+AGG - chr1_3:63836947-63836966 Msa0132620:CDS 45.0%
ACTAAAACAACCACTGGAGG+CGG - chr1_3:63837049-63837068 Msa0132620:intron 45.0%
! CAAGATGCTCATGTTTGCTG+TGG + chr1_3:63837168-63837187 None:intergenic 45.0%
CACAGCAAACATGAGCATCT+TGG - chr1_3:63837166-63837185 Msa0132620:intron 45.0%
CATGAGCATCTTGGTGAGTT+AGG - chr1_3:63837175-63837194 Msa0132620:intron 45.0%
AAACATCGTGGAACGACTCA+AGG + chr1_3:63837738-63837757 None:intergenic 45.0%
CCAAACCACTCAAAGCAAAC+TGG + chr1_3:63838502-63838521 None:intergenic 45.0%
! CCAGTTTGCTTTGAGTGGTT+TGG - chr1_3:63838499-63838518 Msa0132620:CDS 45.0%
! CATGCTTCTTGTGATGGAAG+AGG + chr1_3:63836541-63836560 None:intergenic 45.0%
TACAATGATGACCAGCCATC+TGG - chr1_3:63836662-63836681 Msa0132620:three_prime_UTR 45.0%
! TCTGGTGGTGACTATGAAAC+TGG - chr1_3:63836722-63836741 Msa0132620:three_prime_UTR 45.0%
! TATGGTGCCAAAACAACCAC+TGG - chr1_3:63836794-63836813 Msa0132620:three_prime_UTR 45.0%
CTCTGACACCAAAACAACCA+CGG - chr1_3:63836892-63836911 Msa0132620:CDS 45.0%
TCTGACACCAAAACAACCAC+GGG - chr1_3:63836893-63836912 Msa0132620:CDS 45.0%
GACACTAAAACAACCACTGG+CGG - chr1_3:63836947-63836966 Msa0132620:CDS 45.0%
GACACTAAAACAACCACTGG+TGG - chr1_3:63836947-63836966 Msa0132620:CDS 45.0%
ACTAAAACAACCACTGGTGG+CGG - chr1_3:63836998-63837017 Msa0132620:intron 45.0%
GACACTAAAACAACCACTGG+AGG - chr1_3:63836947-63836966 Msa0132620:CDS 45.0%
ACTAAAACAACCACTGGAGG+CGG - chr1_3:63837049-63837068 Msa0132620:intron 45.0%
! CAAGATGCTCATGTTTGCTG+TGG + chr1_3:63837168-63837187 None:intergenic 45.0%
CACAGCAAACATGAGCATCT+TGG - chr1_3:63837166-63837185 Msa0132620:intron 45.0%
CATGAGCATCTTGGTGAGTT+AGG - chr1_3:63837175-63837194 Msa0132620:intron 45.0%
AAACATCGTGGAACGACTCA+AGG + chr1_3:63837738-63837757 None:intergenic 45.0%
CCAAACCACTCAAAGCAAAC+TGG + chr1_3:63838502-63838521 None:intergenic 45.0%
! CCAGTTTGCTTTGAGTGGTT+TGG - chr1_3:63838499-63838518 Msa0132620:CDS 45.0%
!! TTAAAAATAAATTTGTAAAA+TGG + chr1_3:63837566-63837585 None:intergenic 5.0%
!! TTAAAAATAAATTTGTAAAA+TGG + chr1_3:63837566-63837585 None:intergenic 5.0%
! TCTTGTGATGGAAGAGGCCA+CGG + chr1_3:63836535-63836554 None:intergenic 50.0%
AGGCCTATAGACACTGACAG+TGG - chr1_3:63836575-63836594 Msa0132620:three_prime_UTR 50.0%
AATGATGACCAGCCATCTGG+TGG - chr1_3:63836665-63836684 Msa0132620:three_prime_UTR 50.0%
GACTCTGACACCAAAACCAC+TGG - chr1_3:63836842-63836861 Msa0132620:CDS 50.0%
TCTGACACCAAAACCACTGG+TGG - chr1_3:63836845-63836864 Msa0132620:CDS 50.0%
!! AAAACCACTGGTGGTGGCTA+CGG - chr1_3:63836854-63836873 Msa0132620:CDS 50.0%
AAAACAACCACTGGCGGCTA+CGG - chr1_3:63836953-63836972 Msa0132620:CDS 50.0%
TCTGACACCAAAACCACCAC+CGG - chr1_3:63837094-63837113 Msa0132620:intron 50.0%
ATCACGACCATAACCACCAC+CGG + chr1_3:63837116-63837135 None:intergenic 50.0%
!! AGCTGCTGGTGGTTTTGCTT+TGG - chr1_3:63837204-63837223 Msa0132620:intron 50.0%
AAGACCCAGAGAATGCTCAC+AGG - chr1_3:63838205-63838224 Msa0132620:CDS 50.0%
TGTGCCTGTGAGCATTCTCT+GGG + chr1_3:63838212-63838231 None:intergenic 50.0%
TTGTGCCTGTGAGCATTCTC+TGG + chr1_3:63838213-63838232 None:intergenic 50.0%
! TCTTGTGATGGAAGAGGCCA+CGG + chr1_3:63836535-63836554 None:intergenic 50.0%
AGGCCTATAGACACTGACAG+TGG - chr1_3:63836575-63836594 Msa0132620:three_prime_UTR 50.0%
AATGATGACCAGCCATCTGG+TGG - chr1_3:63836665-63836684 Msa0132620:three_prime_UTR 50.0%
GACTCTGACACCAAAACCAC+TGG - chr1_3:63836842-63836861 Msa0132620:CDS 50.0%
TCTGACACCAAAACCACTGG+TGG - chr1_3:63836845-63836864 Msa0132620:CDS 50.0%
!! AAAACCACTGGTGGTGGCTA+CGG - chr1_3:63836854-63836873 Msa0132620:CDS 50.0%
AAAACAACCACTGGCGGCTA+CGG - chr1_3:63836953-63836972 Msa0132620:CDS 50.0%
TCTGACACCAAAACCACCAC+CGG - chr1_3:63837094-63837113 Msa0132620:intron 50.0%
ATCACGACCATAACCACCAC+CGG + chr1_3:63837116-63837135 None:intergenic 50.0%
!! AGCTGCTGGTGGTTTTGCTT+TGG - chr1_3:63837204-63837223 Msa0132620:intron 50.0%
AAGACCCAGAGAATGCTCAC+AGG - chr1_3:63838205-63838224 Msa0132620:CDS 50.0%
TGTGCCTGTGAGCATTCTCT+GGG + chr1_3:63838212-63838231 None:intergenic 50.0%
TTGTGCCTGTGAGCATTCTC+TGG + chr1_3:63838213-63838232 None:intergenic 50.0%
GATGAAGAGAACCGTAGCCG+TGG - chr1_3:63836515-63836534 Msa0132620:three_prime_UTR 55.0%
TGTAACCACCACCAGATGGC+TGG + chr1_3:63836676-63836695 None:intergenic 55.0%
GGTGCCAAAACAACCACTGG+TGG - chr1_3:63836797-63836816 Msa0132620:three_prime_UTR 55.0%
GCCAAAACAACCACTGGTGG+CGG - chr1_3:63836800-63836819 Msa0132620:three_prime_UTR 55.0%
GACACCAAAACCACTGGTGG+TGG - chr1_3:63836848-63836867 Msa0132620:CDS 55.0%
! GTAGCCACCACCAGTGGTTT+TGG + chr1_3:63836855-63836874 None:intergenic 55.0%
GACACCAAAACAACCACGGG+TGG - chr1_3:63836896-63836915 Msa0132620:CDS 55.0%
ACCAAAACAACCACGGGTGG+CGG - chr1_3:63836899-63836918 Msa0132620:CDS 55.0%
!! GGCGGATATGGTGGTGGTTA+TGG - chr1_3:63836917-63836936 Msa0132620:CDS 55.0%
AGTTGCAGAAGCAGCTGCAG+TGG - chr1_3:63838245-63838264 Msa0132620:CDS 55.0%
GTTGCAGAAGCAGCTGCAGT+GGG - chr1_3:63838246-63838265 Msa0132620:CDS 55.0%
GATGAAGAGAACCGTAGCCG+TGG - chr1_3:63836515-63836534 Msa0132620:three_prime_UTR 55.0%
TGTAACCACCACCAGATGGC+TGG + chr1_3:63836676-63836695 None:intergenic 55.0%
GGTGCCAAAACAACCACTGG+TGG - chr1_3:63836797-63836816 Msa0132620:three_prime_UTR 55.0%
GCCAAAACAACCACTGGTGG+CGG - chr1_3:63836800-63836819 Msa0132620:three_prime_UTR 55.0%
GACACCAAAACCACTGGTGG+TGG - chr1_3:63836848-63836867 Msa0132620:CDS 55.0%
! GTAGCCACCACCAGTGGTTT+TGG + chr1_3:63836855-63836874 None:intergenic 55.0%
GACACCAAAACAACCACGGG+TGG - chr1_3:63836896-63836915 Msa0132620:CDS 55.0%
ACCAAAACAACCACGGGTGG+CGG - chr1_3:63836899-63836918 Msa0132620:CDS 55.0%
!! GGCGGATATGGTGGTGGTTA+TGG - chr1_3:63836917-63836936 Msa0132620:CDS 55.0%
AGTTGCAGAAGCAGCTGCAG+TGG - chr1_3:63838245-63838264 Msa0132620:CDS 55.0%
GTTGCAGAAGCAGCTGCAGT+GGG - chr1_3:63838246-63838265 Msa0132620:CDS 55.0%
GATGGAAGAGGCCACGGCTA+CGG + chr1_3:63836529-63836548 None:intergenic 60.0%
GATGACCAGCCATCTGGTGG+TGG - chr1_3:63836668-63836687 Msa0132620:three_prime_UTR 60.0%
! GCCGCCACCAGTGGTTGTTT+TGG + chr1_3:63836804-63836823 None:intergenic 60.0%
!! ACAACCACTGGTGGCGGCTA+CGG - chr1_3:63836806-63836825 Msa0132620:exon 60.0%
! GGTGGCTACGGTGGTGGTTA+TGG - chr1_3:63836866-63836885 Msa0132620:CDS 60.0%
! TCCGCCACCCGTGGTTGTTT+TGG + chr1_3:63836903-63836922 None:intergenic 60.0%
!! ACAACCACGGGTGGCGGATA+TGG - chr1_3:63836905-63836924 Msa0132620:CDS 60.0%
!! ACAACCACTGGTGGCGGCTA+CGG - chr1_3:63836806-63836825 Msa0132620:exon 60.0%
ACAACCACTGGAGGCGGCTA+CGG - chr1_3:63837055-63837074 Msa0132620:intron 60.0%
GACACCAAAACCACCACCGG+TGG - chr1_3:63837097-63837116 Msa0132620:intron 60.0%
ACCAAAACCACCACCGGTGG+TGG - chr1_3:63837100-63837119 Msa0132620:intron 60.0%
!! ACCACCACCGGTGGTGGTTT+TGG + chr1_3:63837104-63837123 None:intergenic 60.0%
! ACCACCACCGGTGGTGGTTA+TGG - chr1_3:63837106-63837125 Msa0132620:intron 60.0%
ACCATAACCACCACCGGTGG+TGG + chr1_3:63837110-63837129 None:intergenic 60.0%
ACGACCATAACCACCACCGG+TGG + chr1_3:63837113-63837132 None:intergenic 60.0%
! GAGTTAGGTGCTGCAGCTGC+TGG - chr1_3:63837190-63837209 Msa0132620:intron 60.0%
! TTAGGTGCTGCAGCTGCTGG+TGG - chr1_3:63837193-63837212 Msa0132620:intron 60.0%
GAAGCAGCTGCAGTGGGATC+TGG - chr1_3:63838252-63838271 Msa0132620:CDS 60.0%
CAGCTGCAGTGGGATCTGGT+GGG - chr1_3:63838256-63838275 Msa0132620:CDS 60.0%
GATGGAAGAGGCCACGGCTA+CGG + chr1_3:63836529-63836548 None:intergenic 60.0%
GATGACCAGCCATCTGGTGG+TGG - chr1_3:63836668-63836687 Msa0132620:three_prime_UTR 60.0%
! GCCGCCACCAGTGGTTGTTT+TGG + chr1_3:63836804-63836823 None:intergenic 60.0%
!! ACAACCACTGGTGGCGGCTA+CGG - chr1_3:63836806-63836825 Msa0132620:exon 60.0%
! GGTGGCTACGGTGGTGGTTA+TGG - chr1_3:63836866-63836885 Msa0132620:CDS 60.0%
! TCCGCCACCCGTGGTTGTTT+TGG + chr1_3:63836903-63836922 None:intergenic 60.0%
!! ACAACCACGGGTGGCGGATA+TGG - chr1_3:63836905-63836924 Msa0132620:CDS 60.0%
!! ACAACCACTGGTGGCGGCTA+CGG - chr1_3:63836806-63836825 Msa0132620:exon 60.0%
ACAACCACTGGAGGCGGCTA+CGG - chr1_3:63837055-63837074 Msa0132620:intron 60.0%
GACACCAAAACCACCACCGG+TGG - chr1_3:63837097-63837116 Msa0132620:intron 60.0%
ACCAAAACCACCACCGGTGG+TGG - chr1_3:63837100-63837119 Msa0132620:intron 60.0%
!! ACCACCACCGGTGGTGGTTT+TGG + chr1_3:63837104-63837123 None:intergenic 60.0%
! ACCACCACCGGTGGTGGTTA+TGG - chr1_3:63837106-63837125 Msa0132620:intron 60.0%
ACCATAACCACCACCGGTGG+TGG + chr1_3:63837110-63837129 None:intergenic 60.0%
ACGACCATAACCACCACCGG+TGG + chr1_3:63837113-63837132 None:intergenic 60.0%
! GAGTTAGGTGCTGCAGCTGC+TGG - chr1_3:63837190-63837209 Msa0132620:intron 60.0%
! TTAGGTGCTGCAGCTGCTGG+TGG - chr1_3:63837193-63837212 Msa0132620:intron 60.0%
GAAGCAGCTGCAGTGGGATC+TGG - chr1_3:63838252-63838271 Msa0132620:CDS 60.0%
CAGCTGCAGTGGGATCTGGT+GGG - chr1_3:63838256-63838275 Msa0132620:CDS 60.0%
!! ACCACTGGTGGTGGCTACGG+TGG - chr1_3:63836857-63836876 Msa0132620:CDS 65.0%
ACCACCGTAGCCACCACCAG+TGG + chr1_3:63836861-63836880 None:intergenic 65.0%
!! ACTGGTGGTGGCTACGGTGG+TGG - chr1_3:63836860-63836879 Msa0132620:CDS 65.0%
!! ACCACGGGTGGCGGATATGG+TGG - chr1_3:63836908-63836927 Msa0132620:CDS 65.0%
ACCACCATATCCGCCACCCG+TGG + chr1_3:63836912-63836931 None:intergenic 65.0%
!! ACGGGTGGCGGATATGGTGG+TGG - chr1_3:63836911-63836930 Msa0132620:CDS 65.0%
ACAACCACTGGCGGCTACGG+TGG - chr1_3:63836956-63836975 Msa0132620:CDS 65.0%
! GGCGGCTACGGTGGTGGTTA+TGG - chr1_3:63836965-63836984 Msa0132620:CDS 65.0%
! GGCGGCTACGGTGGTGGTTA+TGG - chr1_3:63836965-63836984 Msa0132620:CDS 65.0%
!! GGCGGCTACGGTGGTGGATA+TGG - chr1_3:63837067-63837086 Msa0132620:intron 65.0%
GCAGCTGCAGTGGGATCTGG+TGG - chr1_3:63838255-63838274 Msa0132620:CDS 65.0%
!! ACCACTGGTGGTGGCTACGG+TGG - chr1_3:63836857-63836876 Msa0132620:CDS 65.0%
ACCACCGTAGCCACCACCAG+TGG + chr1_3:63836861-63836880 None:intergenic 65.0%
!! ACTGGTGGTGGCTACGGTGG+TGG - chr1_3:63836860-63836879 Msa0132620:CDS 65.0%
!! ACCACGGGTGGCGGATATGG+TGG - chr1_3:63836908-63836927 Msa0132620:CDS 65.0%
ACCACCATATCCGCCACCCG+TGG + chr1_3:63836912-63836931 None:intergenic 65.0%
!! ACGGGTGGCGGATATGGTGG+TGG - chr1_3:63836911-63836930 Msa0132620:CDS 65.0%
ACAACCACTGGCGGCTACGG+TGG - chr1_3:63836956-63836975 Msa0132620:CDS 65.0%
! GGCGGCTACGGTGGTGGTTA+TGG - chr1_3:63836965-63836984 Msa0132620:CDS 65.0%
! GGCGGCTACGGTGGTGGTTA+TGG - chr1_3:63836965-63836984 Msa0132620:CDS 65.0%
!! GGCGGCTACGGTGGTGGATA+TGG - chr1_3:63837067-63837086 Msa0132620:intron 65.0%
GCAGCTGCAGTGGGATCTGG+TGG - chr1_3:63838255-63838274 Msa0132620:CDS 65.0%
!! ACCACTGGTGGCGGCTACGG+CGG - chr1_3:63836809-63836828 Msa0132620:exon 70.0%
GGCGGCTACGGCGGTGGTTA+TGG - chr1_3:63836818-63836837 Msa0132620:exon 70.0%
ACCACTGGCGGCTACGGTGG+TGG - chr1_3:63836959-63836978 Msa0132620:CDS 70.0%
ACCACCACCGTAGCCGCCAG+TGG + chr1_3:63836963-63836982 None:intergenic 70.0%
!! ACCACTGGTGGCGGCTACGG+TGG - chr1_3:63836809-63836828 Msa0132620:exon 70.0%
ACCACCGTAGCCGCCACCAG+TGG + chr1_3:63837011-63837030 None:intergenic 70.0%
!! ACTGGTGGCGGCTACGGTGG+TGG - chr1_3:63837010-63837029 Msa0132620:intron 70.0%
ACCACTGGAGGCGGCTACGG+TGG - chr1_3:63837058-63837077 Msa0132620:intron 70.0%
ACCACCGTAGCCGCCTCCAG+TGG + chr1_3:63837062-63837081 None:intergenic 70.0%
ACTGGAGGCGGCTACGGTGG+TGG - chr1_3:63837061-63837080 Msa0132620:intron 70.0%
!! ACCACTGGTGGCGGCTACGG+CGG - chr1_3:63836809-63836828 Msa0132620:exon 70.0%
GGCGGCTACGGCGGTGGTTA+TGG - chr1_3:63836818-63836837 Msa0132620:exon 70.0%
ACCACTGGCGGCTACGGTGG+TGG - chr1_3:63836959-63836978 Msa0132620:CDS 70.0%
ACCACCACCGTAGCCGCCAG+TGG + chr1_3:63836963-63836982 None:intergenic 70.0%
!! ACCACTGGTGGCGGCTACGG+TGG - chr1_3:63836809-63836828 Msa0132620:exon 70.0%
ACCACCGTAGCCGCCACCAG+TGG + chr1_3:63837011-63837030 None:intergenic 70.0%
!! ACTGGTGGCGGCTACGGTGG+TGG - chr1_3:63837010-63837029 Msa0132620:intron 70.0%
ACCACTGGAGGCGGCTACGG+TGG - chr1_3:63837058-63837077 Msa0132620:intron 70.0%
ACCACCGTAGCCGCCTCCAG+TGG + chr1_3:63837062-63837081 None:intergenic 70.0%
ACTGGAGGCGGCTACGGTGG+TGG - chr1_3:63837061-63837080 Msa0132620:intron 70.0%
ACCGCCGTAGCCGCCACCAG+TGG + chr1_3:63836813-63836832 None:intergenic 75.0%
!! ACTGGTGGCGGCTACGGCGG+TGG - chr1_3:63836812-63836831 Msa0132620:exon 75.0%
ACCGCCGTAGCCGCCACCAG+TGG + chr1_3:63836813-63836832 None:intergenic 75.0%
!! ACTGGTGGCGGCTACGGCGG+TGG - chr1_3:63836812-63836831 Msa0132620:exon 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 63836509 63838679 63836509 ID=Msa0132620;Name=Msa0132620
chr1_3 mRNA 63836509 63838679 63836509 ID=Msa0132620-mRNA-1;Parent=Msa0132620;Name=Msa0132620-mRNA-1;_AED=0.00;_eAED=0.03;_QI=0|1|0.5|1|1|1|2|311|300
chr1_3 exon 63836509 63837005 63836509 ID=Msa0132620-mRNA-1:exon:21363;Parent=Msa0132620-mRNA-1
chr1_3 exon 63837963 63838679 63837963 ID=Msa0132620-mRNA-1:exon:21362;Parent=Msa0132620-mRNA-1
chr1_3 CDS 63837963 63838679 63837963 ID=Msa0132620-mRNA-1:cds;Parent=Msa0132620-mRNA-1
chr1_3 CDS 63836820 63837005 63836820 ID=Msa0132620-mRNA-1:cds;Parent=Msa0132620-mRNA-1
chr1_3 three_prime_UTR 63836509 63836819 63836509 ID=Msa0132620-mRNA-1:three_prime_utr;Parent=Msa0132620-mRNA-1
Gene Sequence

>Msa0132620

ATGTCTGATGAAGAGAACCGTAGCCGTGGCCTCTTCCATCACAAGAAGCATGATGATGATGATAGTAGGCCTATAGACACTGACAGTGGTTACAACAAAACATCATACTCTACAGGTGATGACTATGATTCTGGTTATAACAAAAAAACATCGTACAATGATGACCAGCCATCTGGTGGTGGTTACAATAAAACATCATATGGTAATGACAATTCTGGTGGTGACTATGAAACTGGTTACAATAAGAACACTGATAATTACTCTAATAATGAAACATCTGGTGGCTATGGTGCCAAAACAACCACTGGTGGCGGCTACGGCGGTGGTTATGGTGACTCTGACACCAAAACCACTGGTGGTGGCTACGGTGGTGGTTATGGTGACTCTGACACCAAAACAACCACGGGTGGCGGATATGGTGGTGGTTATGGTGACTCTGACACTAAAACAACCACTGGCGGCTACGGTGGTGGTTATGGTGACTCTGACACTAAAACAACCACTGGTGGCGGCTACGGTGGTGGTTATGGTGACTCTGACACTAAAACAACCACTGGAGGCGGCTACGGTGGTGGATATGGTGACTCTGACACCAAAACCACCACCGGTGGTGGTTATGGTCGTGATGATGTTGATTATAAGAAGGAGGAGAAACACCACAGCAAACATGAGCATCTTGGTGAGTTAGGTGCTGCAGCTGCTGGTGGTTTTGCTTTGTATGAGAAGCAAAAGTCAGAGAAAGACCCAGAGAATGCTCACAGGCACAAGACAGAAGAAGAAGTTGCAGAAGCAGCTGCAGTGGGATCTGGTGGGTTCGCCTTCCATGAGCATCATGAGAAAAAGGAAACAAAAGAGGAAGAAGAAGAAGTTCATGGAAAGAAGAAACACCATTTCTTTGGCTGA

Protein sequence

>Msa0132620

MSDEENRSRGLFHHKKHDDDDSRPIDTDSGYNKTSYSTGDDYDSGYNKKTSYNDDQPSGGGYNKTSYGNDNSGGDYETGYNKNTDNYSNNETSGGYGAKTTTGGGYGGGYGDSDTKTTGGGYGGGYGDSDTKTTTGGGYGGGYGDSDTKTTTGGYGGGYGDSDTKTTTGGGYGGGYGDSDTKTTTGGGYGGGYGDSDTKTTTGGGYGRDDVDYKKEEKHHSKHEHLGELGAAAAGGFALYEKQKSEKDPENAHRHKTEEEVAEAAAVGSGGFAFHEHHEKKETKEEEEEVHGKKKHHFFG*