Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322200 | XP_024631492.1 | 96.038 | 530 | 18 | 2 | 1 | 530 | 1 | 527 | 0.0 | 1033 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322200 | sp|Q9LTS4|BH041_ARATH | 36.024 | 508 | 239 | 15 | 44 | 522 | 14 | 464 | 3.23e-61 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0322200 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015910 | Msa0322200 | 0.849623 | 2.870589e-60 | -8.615850e-47 |
| Msa0132870 | Msa0322200 | 0.815044 | 1.130771e-51 | -8.615850e-47 |
| Msa0202380 | Msa0322200 | 0.812199 | 4.780901e-51 | -8.615850e-47 |
| Msa0242720 | Msa0322200 | 0.817648 | 2.956945e-52 | -8.615850e-47 |
| Msa0245400 | Msa0322200 | 0.821076 | 4.893465e-53 | -8.615850e-47 |
| Msa0322200 | Msa0390170 | 0.801319 | 9.525282e-49 | -8.615850e-47 |
| Msa0322200 | Msa0480550 | 0.810077 | 1.378820e-50 | -8.615850e-47 |
| Msa0322200 | Msa0500440 | 0.809546 | 1.793366e-50 | -8.615850e-47 |
| Msa0322200 | Msa0546880 | 0.809618 | 1.730970e-50 | -8.615850e-47 |
| Msa0322200 | Msa0588880 | 0.810459 | 1.140438e-50 | -8.615850e-47 |
| Msa0322200 | Msa0589060 | 0.805143 | 1.538990e-49 | -8.615850e-47 |
| Msa0322200 | Msa0652600 | 0.809358 | 1.968692e-50 | -8.615850e-47 |
| Msa0322200 | Msa0716620 | 0.803924 | 2.763743e-49 | -8.615850e-47 |
| Msa0322200 | Msa0744560 | 0.811306 | 7.478177e-51 | -8.615850e-47 |
| Msa0322200 | Msa0826360 | 0.812892 | 3.373310e-51 | -8.615850e-47 |
| Msa0322200 | Msa0826370 | 0.823065 | 1.692380e-53 | -8.615850e-47 |
| Msa0322200 | Msa0826380 | 0.808694 | 2.731227e-50 | -8.615850e-47 |
| Msa0322200 | Msa0826450 | 0.810461 | 1.139662e-50 | -8.615850e-47 |
| Msa0322200 | Msa0865810 | 0.808582 | 2.885883e-50 | -8.615850e-47 |
| Msa0322200 | Msa0865820 | 0.801265 | 9.770731e-49 | -8.615850e-47 |
| Msa0322200 | Msa0865830 | 0.806397 | 8.392043e-50 | -8.615850e-47 |
| Msa0322200 | Msa1041250 | 0.816804 | 4.577439e-52 | -8.615850e-47 |
| Msa0322200 | Msa1110900 | 0.802816 | 4.688471e-49 | -8.615850e-47 |
| Msa0322200 | Msa1154570 | 0.802160 | 6.399869e-49 | -8.615850e-47 |
| Msa0322200 | Msa1179340 | 0.825177 | 5.404646e-54 | -8.615850e-47 |
| Msa0322200 | Msa1233090 | 0.807197 | 5.684217e-50 | -8.615850e-47 |
| Msa0322200 | Msa1366480 | 0.813092 | 3.049185e-51 | -8.615850e-47 |
| Msa0322200 | Msa1401110 | 0.832293 | 1.026695e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322200 | MtrunA17_Chr2g0299471 | 96.444 | 450 | 13 | 2 | 81 | 530 | 6 | 452 | 0.0 | 876 |
| Msa0322200 | MtrunA17_Chr5g0400661 | 28.352 | 261 | 153 | 9 | 279 | 518 | 82 | 329 | 6.93e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322200 | AT5G56960.2 | 39.852 | 542 | 264 | 16 | 12 | 522 | 13 | 523 | 3.72e-91 | 289 |
| Msa0322200 | AT5G56960.1 | 36.024 | 508 | 239 | 15 | 44 | 522 | 14 | 464 | 3.29e-62 | 211 |
Find 93 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGTATTGATTCGATTAT+TGG | 0.081677 | 2_4:+24608152 | Msa0322200:CDS |
| CTCCTTTGCTGTTATTAGTA+TGG | 0.233503 | 2_4:-24607893 | None:intergenic |
| GATGCTCTCACATTTGTCTT+TGG | 0.245611 | 2_4:+24605403 | Msa0322200:CDS |
| GAATAGTCGTTTGTCCTTCT+TGG | 0.247039 | 2_4:+24605570 | Msa0322200:intron |
| AAATATATACTTTGATAATA+TGG | 0.249981 | 2_4:-24605436 | None:intergenic |
| TACATGTGAGTCATATATTT+TGG | 0.258021 | 2_4:-24610274 | None:intergenic |
| CAATTACCAAGTTCTTCTTT+AGG | 0.263208 | 2_4:+24605619 | Msa0322200:CDS |
| AATTACCAAGTTCTTCTTTA+GGG | 0.266258 | 2_4:+24605620 | Msa0322200:CDS |
| CTAAAATTAGACCCTATATT+AGG | 0.295005 | 2_4:-24607135 | None:intergenic |
| CCACTCTTCTCACTGCTTCC+TGG | 0.304864 | 2_4:-24610223 | None:intergenic |
| TCATTCTCAGTTTGTGTTGT+AGG | 0.328993 | 2_4:-24606988 | None:intergenic |
| CTTCCAAATGCACTAGCTTC+TGG | 0.330949 | 2_4:-24607093 | None:intergenic |
| TACTTCATCAAATAACCTTC+AGG | 0.345353 | 2_4:+24608253 | Msa0322200:CDS |
| CATGATAAAAGTCCTAATAT+AGG | 0.347025 | 2_4:+24607123 | Msa0322200:CDS |
| CATCCAGAAGCTAGTGCATT+TGG | 0.365951 | 2_4:+24607090 | Msa0322200:CDS |
| ATGGGACGAGGAAGCCTTCC+AGG | 0.369330 | 2_4:+24610205 | Msa0322200:CDS |
| ATGATAAAAGTCCTAATATA+GGG | 0.378212 | 2_4:+24607124 | Msa0322200:CDS |
| CTACTTAGAGCTACAACAAT+TGG | 0.379903 | 2_4:+24606056 | Msa0322200:CDS |
| GGAGACATTGAGATCTTTGA+TGG | 0.384684 | 2_4:+24607912 | Msa0322200:CDS |
| AGAATTGATGTCACAACAAT+TGG | 0.385231 | 2_4:+24607966 | Msa0322200:CDS |
| ATATGTCAACTTGGTTTCAA+TGG | 0.387404 | 2_4:+24608194 | Msa0322200:CDS |
| CATTCTCAGTTTGTGTTGTA+GGG | 0.396646 | 2_4:-24606987 | None:intergenic |
| GGTAGTAGTGTGTTTGAAAC+AGG | 0.397618 | 2_4:-24606919 | None:intergenic |
| AATATGAGAGATGAATATTC+AGG | 0.418930 | 2_4:-24606811 | None:intergenic |
| ATCAAATAACCTTCAGGCTA+AGG | 0.429025 | 2_4:+24608259 | Msa0322200:CDS |
| AATTCAGTTCTGACGGCTAC+AGG | 0.433952 | 2_4:-24605354 | None:intergenic |
| GAATATTTATTCCTCCAAGT+TGG | 0.443689 | 2_4:-24606885 | None:intergenic |
| CAATTGTTGTAGCTCTAAGT+AGG | 0.450587 | 2_4:-24606055 | None:intergenic |
| GGGGTGTAGATAGAACATTT+TGG | 0.464905 | 2_4:-24607029 | None:intergenic |
| AATATTTATTCCTCCAAGTT+GGG | 0.465125 | 2_4:-24606884 | None:intergenic |
| GGTAATTGTTGAAGTTGAAA+AGG | 0.465384 | 2_4:-24606940 | None:intergenic |
| TCACCTGATCCTACCCAACT+TGG | 0.482330 | 2_4:+24606871 | Msa0322200:CDS |
| CGTTCTCTAATGCAATCTCT+TGG | 0.486499 | 2_4:+24605381 | Msa0322200:CDS |
| AATTGTGTTGGTGTGATTTG+AGG | 0.486696 | 2_4:-24606961 | None:intergenic |
| CCTCCAAGTTGGGTAGGATC+AGG | 0.489579 | 2_4:-24606874 | None:intergenic |
| AGTCGTTTGTCCTTCTTGGA+TGG | 0.492248 | 2_4:+24605574 | Msa0322200:intron |
| AACAAAGGAGAAATTGAGCT+TGG | 0.495316 | 2_4:+24606354 | Msa0322200:CDS |
| AATTGAGGTGGAGAAGTTCC+AGG | 0.500124 | 2_4:-24606847 | None:intergenic |
| TCTTCTCACTGCTTCCTGGA+AGG | 0.503286 | 2_4:-24610219 | None:intergenic |
| ATTACTTCCTCAAGGAACTA+AGG | 0.503295 | 2_4:+24607326 | Msa0322200:CDS |
| GTTGTAGGGAATAATTGTGT+TGG | 0.512655 | 2_4:-24606973 | None:intergenic |
| TTTACAGGAAGCAAGGATCA+AGG | 0.513199 | 2_4:+24606229 | Msa0322200:intron |
| GTGTTTGAAACAGGTCTCAT+TGG | 0.519603 | 2_4:-24606910 | None:intergenic |
| AGAAGATGAATCAATGGTAG+TGG | 0.525040 | 2_4:+24608092 | Msa0322200:CDS |
| TGCGCAGGCGGATATTCAAA+CGG | 0.526338 | 2_4:+24606672 | Msa0322200:intron |
| TTCATCAGAAGATGAATCAA+TGG | 0.532346 | 2_4:+24608086 | Msa0322200:CDS |
| CTGAGTAATCCTTAGCCTGA+AGG | 0.534544 | 2_4:-24608268 | None:intergenic |
| AATTGTTGTAGCTCTAAGTA+GGG | 0.541165 | 2_4:-24606054 | None:intergenic |
| AGAGATGAATATTCAGGAGT+AGG | 0.544889 | 2_4:-24606805 | None:intergenic |
| TTTATTCCTCCAAGTTGGGT+AGG | 0.547865 | 2_4:-24606880 | None:intergenic |
| TGATGAAGTAAATCATTCCC+TGG | 0.552419 | 2_4:-24608240 | None:intergenic |
| CCTGATCCTACCCAACTTGG+AGG | 0.553608 | 2_4:+24606874 | Msa0322200:CDS |
| TCAAGATCAATATGTCAACT+TGG | 0.554272 | 2_4:+24608185 | Msa0322200:CDS |
| GTTTATGCAGATAAGTGAAT+GGG | 0.559981 | 2_4:+24610187 | Msa0322200:intron |
| TTCCATACTAATAACAGCAA+AGG | 0.563418 | 2_4:+24607891 | Msa0322200:CDS |
| GAGGTTGATGTTGATGAGAA+GGG | 0.565051 | 2_4:-24607050 | None:intergenic |
| TTTGAAACAGGTCTCATTGG+TGG | 0.575275 | 2_4:-24606907 | None:intergenic |
| TGAGGTTGATGTTGATGAGA+AGG | 0.576774 | 2_4:-24607051 | None:intergenic |
| ACACTCCCTAAAGAAGAACT+TGG | 0.577549 | 2_4:-24605625 | None:intergenic |
| ACAAATACAAATCATGCACC+AGG | 0.579495 | 2_4:+24608222 | Msa0322200:CDS |
| ATGAGATCACTATCAACAGC+AGG | 0.579733 | 2_4:+24606778 | Msa0322200:CDS |
| CTTAGAGCATTACTTCCTCA+AGG | 0.580881 | 2_4:+24607318 | Msa0322200:CDS |
| GGTTTATGCAGATAAGTGAA+TGG | 0.584114 | 2_4:+24610186 | Msa0322200:intron |
| CAGTTCTGACGGCTACAGGA+AGG | 0.586512 | 2_4:-24605350 | None:intergenic |
| CTTCAGGCTAAGGATTACTC+AGG | 0.589180 | 2_4:+24608269 | Msa0322200:CDS |
| ATGATGAAGTTGATTACTCG+AGG | 0.589833 | 2_4:-24607244 | None:intergenic |
| CAAGAGATTGCATTAGAGAA+CGG | 0.600137 | 2_4:-24605380 | None:intergenic |
| AGTTCTGACGGCTACAGGAA+GGG | 0.603804 | 2_4:-24605349 | None:intergenic |
| AGGTTGATGTTGATGAGAAG+GGG | 0.605846 | 2_4:-24607049 | None:intergenic |
| ACGGATAAATTCAGTTCTGA+CGG | 0.607682 | 2_4:-24605361 | None:intergenic |
| GGACTTGCAAGTAAACATGA+TGG | 0.607746 | 2_4:+24608113 | Msa0322200:CDS |
| GACTTGCAAGTAAACATGAT+GGG | 0.608117 | 2_4:+24608114 | Msa0322200:CDS |
| ATTGTAGAAACCATCCAAGA+AGG | 0.610273 | 2_4:-24605584 | None:intergenic |
| ATTGAAGATGAAGATGATGA+AGG | 0.610501 | 2_4:-24606757 | None:intergenic |
| TCAACCTCAGCAAAATTATG+TGG | 0.614391 | 2_4:+24607065 | Msa0322200:CDS |
| GTAGGATCAGGTGAAAATTG+AGG | 0.615518 | 2_4:-24606862 | None:intergenic |
| TGATTCCTAAAAGCTAGTCC+AGG | 0.617478 | 2_4:-24606027 | None:intergenic |
| TGATGAAGTTGATTACTCGA+GGG | 0.623889 | 2_4:-24607243 | None:intergenic |
| GTACGTACCTTAGTTCCTTG+AGG | 0.626837 | 2_4:-24607333 | None:intergenic |
| CTATATACCACATATATGGA+AGG | 0.632139 | 2_4:+24605318 | None:intergenic |
| CAGAAGCTAGTGCATTTGGA+AGG | 0.633413 | 2_4:+24607094 | Msa0322200:CDS |
| GCAGATAAGTGAATGGGACG+AGG | 0.636589 | 2_4:+24610193 | Msa0322200:intron |
| AATGAGAGATCGAAATCAAG+CGG | 0.637236 | 2_4:+24607215 | Msa0322200:CDS |
| GGATCAGGTGAAAATTGAGG+TGG | 0.639584 | 2_4:-24606859 | None:intergenic |
| TAAAAGCTAGTCCAGGAACA+CGG | 0.640221 | 2_4:-24606020 | None:intergenic |
| ATATTCAACATAAATCCACC+TGG | 0.642233 | 2_4:+24606829 | Msa0322200:CDS |
| GATGAAGTTGATTACTCGAG+GGG | 0.643129 | 2_4:-24607242 | None:intergenic |
| CCAGGAAGCAGTGAGAAGAG+TGG | 0.648622 | 2_4:+24610223 | Msa0322200:CDS |
| GGTTGATGTTGATGAGAAGG+GGG | 0.653653 | 2_4:-24607048 | None:intergenic |
| GAAGATGAAGATGATGAAGG+TGG | 0.654902 | 2_4:-24606754 | None:intergenic |
| AATACAGACACAATTCTACC+AGG | 0.662180 | 2_4:+24606104 | Msa0322200:CDS |
| TGAGGTGGAGAAGTTCCAGG+TGG | 0.714377 | 2_4:-24606844 | None:intergenic |
| CAAATACAAATCATGCACCA+GGG | 0.722090 | 2_4:+24608223 | Msa0322200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAATTATAAA+CGG | - | chr2_4:24608602-24608621 | None:intergenic | 0.0% |
| !!! | TTTATAATTTTTTTTTTTTT+TGG | + | chr2_4:24608602-24608621 | Msa0322200:intron | 0.0% |
| !!! | AAATATATACTTTGATAATA+TGG | - | chr2_4:24605439-24605458 | None:intergenic | 10.0% |
| !! | AAAGTTTATTGTAATTAAAT+TGG | + | chr2_4:24605721-24605740 | Msa0322200:intron | 10.0% |
| !!! | ATTAATTTGTGAAATAATTA+AGG | + | chr2_4:24608325-24608344 | Msa0322200:intron | 10.0% |
| !!! | TTAATTTGTGAAATAATTAA+GGG | + | chr2_4:24608326-24608345 | Msa0322200:intron | 10.0% |
| !!! | ATTTTCAAATTTTTCAAAAA+TGG | + | chr2_4:24609011-24609030 | Msa0322200:intron | 10.0% |
| !!! | ACTTTTTATAATAGAATTTA+TGG | - | chr2_4:24609390-24609409 | None:intergenic | 10.0% |
| !! | TCTCATAAAAAAAAAAAAAT+TGG | - | chr2_4:24609941-24609960 | None:intergenic | 10.0% |
| !!! | AGTTTAGAATATAATAATGT+AGG | - | chr2_4:24605482-24605501 | None:intergenic | 15.0% |
| !!! | ATACAATTTGGTTTTTTTTT+TGG | + | chr2_4:24605548-24605567 | Msa0322200:intron | 15.0% |
| !!! | AATTCTTTTTTTTTTTTTGC+CGG | + | chr2_4:24605768-24605787 | Msa0322200:intron | 15.0% |
| !!! | GTAAATAATTTTCTTTCATT+AGG | - | chr2_4:24606144-24606163 | None:intergenic | 15.0% |
| !! | TTCAATACTTGTATATATTA+TGG | + | chr2_4:24606177-24606196 | Msa0322200:intron | 15.0% |
| !! | AATATTGTTTCGTTAAAAAT+TGG | + | chr2_4:24606448-24606467 | Msa0322200:intron | 15.0% |
| !! | ATATTGTTTCGTTAAAAATT+GGG | + | chr2_4:24606449-24606468 | Msa0322200:intron | 15.0% |
| !!! | AATGCATTATTTTGTATATA+AGG | + | chr2_4:24607390-24607409 | Msa0322200:intron | 15.0% |
| !!! | TCGTAATTTTTTTGATATTA+AGG | + | chr2_4:24607549-24607568 | Msa0322200:intron | 15.0% |
| !! | TGTTGTAAATAAAATAAATG+TGG | + | chr2_4:24607659-24607678 | Msa0322200:intron | 15.0% |
| !!! | AAAATTTAATTTATGCATGA+AGG | - | chr2_4:24608517-24608536 | None:intergenic | 15.0% |
| !!! | TGGATTATTTGTTATATATT+AGG | - | chr2_4:24609593-24609612 | None:intergenic | 15.0% |
| !!! | ATTGGTTTATGTATAAAAAT+TGG | - | chr2_4:24609974-24609993 | None:intergenic | 15.0% |
| !! | TAGAATATAATAATGTAGGT+AGG | - | chr2_4:24605478-24605497 | None:intergenic | 20.0% |
| !! | TTAGAAAAAGACATTTCTTA+AGG | - | chr2_4:24605889-24605908 | None:intergenic | 20.0% |
| !! | ACATATAATGTAAATGTTGT+CGG | + | chr2_4:24606423-24606442 | Msa0322200:intron | 20.0% |
| !! | TATTGTTTCGTTAAAAATTG+GGG | + | chr2_4:24606450-24606469 | Msa0322200:intron | 20.0% |
| !!! | TTGATTTAACCACATTTTTT+CGG | + | chr2_4:24606648-24606667 | Msa0322200:intron | 20.0% |
| !! | ATGATAAAAGTCCTAATATA+GGG | + | chr2_4:24607124-24607143 | Msa0322200:CDS | 20.0% |
| !!! | TAGTATTTCTTTTGTATAGT+GGG | - | chr2_4:24607511-24607530 | None:intergenic | 20.0% |
| !! | GGCAATAAAAATAAAACAAA+AGG | + | chr2_4:24607586-24607605 | Msa0322200:intron | 20.0% |
| !!! | GCATAATTTTTGTTTGTTTT+TGG | - | chr2_4:24607764-24607783 | None:intergenic | 20.0% |
| !!! | AATTTTTGCACTTATAACTA+CGG | - | chr2_4:24608484-24608503 | None:intergenic | 20.0% |
| !!! | TGATCTTATATCTAGAATAA+TGG | - | chr2_4:24608842-24608861 | None:intergenic | 20.0% |
| !!! | AACAGTTGTTTAAATTTTGA+CGG | - | chr2_4:24608912-24608931 | None:intergenic | 20.0% |
| !!! | TTCAAATTTTTCAAAAATGG+TGG | + | chr2_4:24609014-24609033 | Msa0322200:intron | 20.0% |
| !!! | TAATTAGGTTTTGAAAATAG+TGG | + | chr2_4:24609103-24609122 | Msa0322200:intron | 20.0% |
| !!! | ATTTTCATCGACATAATAAT+GGG | - | chr2_4:24609163-24609182 | None:intergenic | 20.0% |
| !!! | AATTTTCATCGACATAATAA+TGG | - | chr2_4:24609164-24609183 | None:intergenic | 20.0% |
| !! | GTATACAACTTCAAATATAT+TGG | + | chr2_4:24609194-24609213 | Msa0322200:intron | 20.0% |
| !!! | CTTCAAATATATTGGTTAAA+AGG | + | chr2_4:24609202-24609221 | Msa0322200:intron | 20.0% |
| !!! | AAATATATTGGTTAAAAGGA+AGG | + | chr2_4:24609206-24609225 | Msa0322200:intron | 20.0% |
| !!! | TGAAAAAGTGAATTCTATTT+TGG | + | chr2_4:24609327-24609346 | Msa0322200:intron | 20.0% |
| !! | TTTCTCGAAAACAATATATA+TGG | - | chr2_4:24609613-24609632 | None:intergenic | 20.0% |
| !!! | AGCATATCTCATTTTTTTTA+AGG | + | chr2_4:24609800-24609819 | Msa0322200:intron | 20.0% |
| !!! | ATTTTGTGGTATGTATTATA+GGG | - | chr2_4:24610103-24610122 | None:intergenic | 20.0% |
| !!! | AAAGATGGAAACTAATTTTA+TGG | + | chr2_4:24610141-24610160 | Msa0322200:intron | 20.0% |
| ! | ATATAATAATGTAGGTAGGT+AGG | - | chr2_4:24605474-24605493 | None:intergenic | 25.0% |
| ! | TTGATTGTGCTTATACAATT+TGG | + | chr2_4:24605536-24605555 | Msa0322200:intron | 25.0% |
| ! | AATTACCAAGTTCTTCTTTA+GGG | + | chr2_4:24605620-24605639 | Msa0322200:CDS | 25.0% |
| !! | AACAGCTTTTTAATCAATAC+AGG | + | chr2_4:24605653-24605672 | Msa0322200:CDS | 25.0% |
| ! | ATATTATGGTTATGTTGCTA+AGG | + | chr2_4:24606191-24606210 | Msa0322200:intron | 25.0% |
| !!! | TAGCATGTTTTTGTTTTTAC+AGG | + | chr2_4:24606214-24606233 | Msa0322200:intron | 25.0% |
| !! | ATAGAGAATTTTCAGTTTCT+TGG | - | chr2_4:24606267-24606286 | None:intergenic | 25.0% |
| ! | AATATGAGAGATGAATATTC+AGG | - | chr2_4:24606814-24606833 | None:intergenic | 25.0% |
| ! | AATATTTATTCCTCCAAGTT+GGG | - | chr2_4:24606887-24606906 | None:intergenic | 25.0% |
| ! | CATGATAAAAGTCCTAATAT+AGG | + | chr2_4:24607123-24607142 | Msa0322200:CDS | 25.0% |
| ! | CTAAAATTAGACCCTATATT+AGG | - | chr2_4:24607138-24607157 | None:intergenic | 25.0% |
| ! | CAAACGATTATGTATAATGA+CGG | + | chr2_4:24607466-24607485 | Msa0322200:intron | 25.0% |
| !! | GTAGTATTTCTTTTGTATAG+TGG | - | chr2_4:24607512-24607531 | None:intergenic | 25.0% |
| !!! | TGATGTATTGATTCGATTAT+TGG | + | chr2_4:24608152-24608171 | Msa0322200:CDS | 25.0% |
| !! | ATTTTTGCACTTATAACTAC+GGG | - | chr2_4:24608483-24608502 | None:intergenic | 25.0% |
| !!! | ATTGTTGTTAGAGTTTTGAA+CGG | - | chr2_4:24608681-24608700 | None:intergenic | 25.0% |
| ! | GTTGATTAAGTATTTATCCA+CGG | + | chr2_4:24608929-24608948 | Msa0322200:intron | 25.0% |
| !!! | ATTGCCTTATTTACATAAGT+CGG | + | chr2_4:24608984-24609003 | Msa0322200:intron | 25.0% |
| !!! | ATTACCGACTTATGTAAATA+AGG | - | chr2_4:24608991-24609010 | None:intergenic | 25.0% |
| ! | GATAATACACTCAGATAATT+AGG | + | chr2_4:24609088-24609107 | Msa0322200:intron | 25.0% |
| !! | TTTTCATCGACATAATAATG+GGG | - | chr2_4:24609162-24609181 | None:intergenic | 25.0% |
| !! | TATATGACTTGTGTAATCTT+TGG | - | chr2_4:24609301-24609320 | None:intergenic | 25.0% |
| ! | TTGTTATATATTAGGTCGTT+TGG | - | chr2_4:24609585-24609604 | None:intergenic | 25.0% |
| !!! | CATTTTTGAAAGAGTTCAAT+TGG | - | chr2_4:24609992-24610011 | None:intergenic | 25.0% |
| !! | GATTTTGTGGTATGTATTAT+AGG | - | chr2_4:24610104-24610123 | None:intergenic | 25.0% |
| !!! | TCATATATTTTGGTCTACTT+GGG | - | chr2_4:24610267-24610286 | None:intergenic | 25.0% |
| CAATTACCAAGTTCTTCTTT+AGG | + | chr2_4:24605619-24605638 | Msa0322200:CDS | 30.0% | |
| GAAAACAAAAGAGTTTCTGA+TGG | - | chr2_4:24605860-24605879 | None:intergenic | 30.0% | |
| GTAAAGATCTCATGATCTAA+CGG | - | chr2_4:24605947-24605966 | None:intergenic | 30.0% | |
| !! | AATTGTTGTAGCTCTAAGTA+GGG | - | chr2_4:24606057-24606076 | None:intergenic | 30.0% |
| !!! | TTTTGTTTTTACAGGAAGCA+AGG | + | chr2_4:24606222-24606241 | Msa0322200:intron | 30.0% |
| !!! | TTTTCAGACTGTTGTTTTCA+TGG | + | chr2_4:24606326-24606345 | Msa0322200:intron | 30.0% |
| !!! | TTTCAGACTGTTGTTTTCAT+GGG | + | chr2_4:24606327-24606346 | Msa0322200:intron | 30.0% |
| TTCGTTAAAAATTGGGGAAA+AGG | + | chr2_4:24606456-24606475 | Msa0322200:intron | 30.0% | |
| TACCATTTGAACTGTACTTA+CGG | - | chr2_4:24606486-24606505 | None:intergenic | 30.0% | |
| TATTAGAAGCGAGAAATCAT+GGG | - | chr2_4:24606544-24606563 | None:intergenic | 30.0% | |
| ! | ATAGTCTTTTTACAACTCCA+AGG | + | chr2_4:24606561-24606580 | Msa0322200:intron | 30.0% |
| ! | TAGTCTTTTTACAACTCCAA+GGG | + | chr2_4:24606562-24606581 | Msa0322200:intron | 30.0% |
| GAATAAAGTTCAAATTCCCT+TGG | - | chr2_4:24606581-24606600 | None:intergenic | 30.0% | |
| ATTGAAGATGAAGATGATGA+AGG | - | chr2_4:24606760-24606779 | None:intergenic | 30.0% | |
| ATATTCAACATAAATCCACC+TGG | + | chr2_4:24606829-24606848 | Msa0322200:CDS | 30.0% | |
| GAATATTTATTCCTCCAAGT+TGG | - | chr2_4:24606888-24606907 | None:intergenic | 30.0% | |
| GGTAATTGTTGAAGTTGAAA+AGG | - | chr2_4:24606943-24606962 | None:intergenic | 30.0% | |
| GTTTGCAAGAAAAATCTTGA+CGG | - | chr2_4:24607451-24607470 | None:intergenic | 30.0% | |
| !!! | ATTTCTTTTGTATAGTGGGT+TGG | - | chr2_4:24607507-24607526 | None:intergenic | 30.0% |
| TACTACGCATCATTAGTATT+TGG | + | chr2_4:24607526-24607545 | Msa0322200:intron | 30.0% | |
| ATAAAACAAAAGGATCTGAG+TGG | + | chr2_4:24607596-24607615 | Msa0322200:intron | 30.0% | |
| TAAAACAAAAGGATCTGAGT+GGG | + | chr2_4:24607597-24607616 | Msa0322200:intron | 30.0% | |
| AAATAAATGTGGTTGAGAAG+AGG | + | chr2_4:24607670-24607689 | Msa0322200:intron | 30.0% | |
| AATAAATGTGGTTGAGAAGA+GGG | + | chr2_4:24607671-24607690 | Msa0322200:intron | 30.0% | |
| TAATCTCTACTCTACAAGAT+AGG | - | chr2_4:24607701-24607720 | None:intergenic | 30.0% | |
| !!! | CTAACATCCATGTTTTTTGT+CGG | - | chr2_4:24607791-24607810 | None:intergenic | 30.0% |
| TTCCATACTAATAACAGCAA+AGG | + | chr2_4:24607891-24607910 | Msa0322200:CDS | 30.0% | |
| AGAATTGATGTCACAACAAT+TGG | + | chr2_4:24607966-24607985 | Msa0322200:CDS | 30.0% | |
| TTCATCAGAAGATGAATCAA+TGG | + | chr2_4:24608086-24608105 | Msa0322200:CDS | 30.0% | |
| TCAAGATCAATATGTCAACT+TGG | + | chr2_4:24608185-24608204 | Msa0322200:CDS | 30.0% | |
| ATATGTCAACTTGGTTTCAA+TGG | + | chr2_4:24608194-24608213 | Msa0322200:CDS | 30.0% | |
| TACTTCATCAAATAACCTTC+AGG | + | chr2_4:24608253-24608272 | Msa0322200:CDS | 30.0% | |
| !! | TTTTTGGTAAGCAAAATGCT+AGG | + | chr2_4:24608618-24608637 | Msa0322200:intron | 30.0% |
| ATAATGTCACAAGCTTATTG+TGG | - | chr2_4:24608718-24608737 | None:intergenic | 30.0% | |
| !!! | CTTTTAGTTCAACGTAACTA+TGG | + | chr2_4:24608876-24608895 | Msa0322200:intron | 30.0% |
| ! | GTATTTTATATGGTATACCG+TGG | - | chr2_4:24608949-24608968 | None:intergenic | 30.0% |
| !!! | GGGTGGAAAAGTATTTTATA+TGG | - | chr2_4:24608959-24608978 | None:intergenic | 30.0% |
| TGTAAATAAGGCAATTGCTA+GGG | - | chr2_4:24608979-24608998 | None:intergenic | 30.0% | |
| ATGTAAATAAGGCAATTGCT+AGG | - | chr2_4:24608980-24608999 | None:intergenic | 30.0% | |
| !!! | TTAGGTTTTGAAAATAGTGG+CGG | + | chr2_4:24609106-24609125 | Msa0322200:intron | 30.0% |
| TAGTCTGTCAAATGTCAATT+TGG | + | chr2_4:24609534-24609553 | Msa0322200:intron | 30.0% | |
| TTATATATTAGGTCGTTTGG+TGG | - | chr2_4:24609582-24609601 | None:intergenic | 30.0% | |
| ! | TTGATCAATGATGATGACAA+AGG | - | chr2_4:24610055-24610074 | None:intergenic | 30.0% |
| CATACCACAAAATCTTCATT+AGG | + | chr2_4:24610110-24610129 | Msa0322200:intron | 30.0% | |
| ! | GGAAGAATATTAACCAGTTT+TGG | + | chr2_4:24610162-24610181 | Msa0322200:intron | 30.0% |
| !! | AGAATATTAACCAGTTTTGG+TGG | + | chr2_4:24610165-24610184 | Msa0322200:intron | 30.0% |
| GTTTATGCAGATAAGTGAAT+GGG | + | chr2_4:24610187-24610206 | Msa0322200:intron | 30.0% | |
| ! | ACGGATAAATTCAGTTCTGA+CGG | - | chr2_4:24605364-24605383 | None:intergenic | 35.0% |
| CAAGAGATTGCATTAGAGAA+CGG | - | chr2_4:24605383-24605402 | None:intergenic | 35.0% | |
| AGCACAATCAACAACTACTA+TGG | - | chr2_4:24605527-24605546 | None:intergenic | 35.0% | |
| ATTGTAGAAACCATCCAAGA+AGG | - | chr2_4:24605587-24605606 | None:intergenic | 35.0% | |
| !! | CAATTGTTGTAGCTCTAAGT+AGG | - | chr2_4:24606058-24606077 | None:intergenic | 35.0% |
| CTACTTAGAGCTACAACAAT+TGG | + | chr2_4:24606056-24606075 | Msa0322200:CDS | 35.0% | |
| AATACAGACACAATTCTACC+AGG | + | chr2_4:24606104-24606123 | Msa0322200:CDS | 35.0% | |
| TAGGACAACAAGTATTAACC+TGG | - | chr2_4:24606125-24606144 | None:intergenic | 35.0% | |
| !!! | TTCAGACTGTTGTTTTCATG+GGG | + | chr2_4:24606328-24606347 | Msa0322200:intron | 35.0% |
| AACAAAGGAGAAATTGAGCT+TGG | + | chr2_4:24606354-24606373 | Msa0322200:CDS | 35.0% | |
| ACCATTTGAACTGTACTTAC+GGG | - | chr2_4:24606485-24606504 | None:intergenic | 35.0% | |
| CAGTTCAAATGGTAAAAGAC+TGG | + | chr2_4:24606492-24606511 | Msa0322200:intron | 35.0% | |
| CTATTAGAAGCGAGAAATCA+TGG | - | chr2_4:24606545-24606564 | None:intergenic | 35.0% | |
| GTCTGTCTTGAAAAATCTTC+AGG | - | chr2_4:24606715-24606734 | None:intergenic | 35.0% | |
| AGAGATGAATATTCAGGAGT+AGG | - | chr2_4:24606808-24606827 | None:intergenic | 35.0% | |
| ! | AATTGTGTTGGTGTGATTTG+AGG | - | chr2_4:24606964-24606983 | None:intergenic | 35.0% |
| GTTGTAGGGAATAATTGTGT+TGG | - | chr2_4:24606976-24606995 | None:intergenic | 35.0% | |
| CATTCTCAGTTTGTGTTGTA+GGG | - | chr2_4:24606990-24607009 | None:intergenic | 35.0% | |
| TCATTCTCAGTTTGTGTTGT+AGG | - | chr2_4:24606991-24607010 | None:intergenic | 35.0% | |
| TCAACCTCAGCAAAATTATG+TGG | + | chr2_4:24607065-24607084 | Msa0322200:CDS | 35.0% | |
| AATGAGAGATCGAAATCAAG+CGG | + | chr2_4:24607215-24607234 | Msa0322200:CDS | 35.0% | |
| ! | TGATGAAGTTGATTACTCGA+GGG | - | chr2_4:24607246-24607265 | None:intergenic | 35.0% |
| ! | ATGATGAAGTTGATTACTCG+AGG | - | chr2_4:24607247-24607266 | None:intergenic | 35.0% |
| ATTACTTCCTCAAGGAACTA+AGG | + | chr2_4:24607326-24607345 | Msa0322200:CDS | 35.0% | |
| ATTAAGGATCGCAATGTTCT+TGG | + | chr2_4:24607565-24607584 | Msa0322200:intron | 35.0% | |
| GAATGTGAGATCTTGCTTAA+GGG | - | chr2_4:24607636-24607655 | None:intergenic | 35.0% | |
| !! | CTCCTTTGCTGTTATTAGTA+TGG | - | chr2_4:24607896-24607915 | None:intergenic | 35.0% |
| AGAAGATGAATCAATGGTAG+TGG | + | chr2_4:24608092-24608111 | Msa0322200:CDS | 35.0% | |
| GACTTGCAAGTAAACATGAT+GGG | + | chr2_4:24608114-24608133 | Msa0322200:CDS | 35.0% | |
| ACAAATACAAATCATGCACC+AGG | + | chr2_4:24608222-24608241 | Msa0322200:CDS | 35.0% | |
| CAAATACAAATCATGCACCA+GGG | + | chr2_4:24608223-24608242 | Msa0322200:CDS | 35.0% | |
| TGATGAAGTAAATCATTCCC+TGG | - | chr2_4:24608243-24608262 | None:intergenic | 35.0% | |
| ATCAAATAACCTTCAGGCTA+AGG | + | chr2_4:24608259-24608278 | Msa0322200:CDS | 35.0% | |
| CTAGAATAATGGTATGATCG+AGG | - | chr2_4:24608831-24608850 | None:intergenic | 35.0% | |
| GGCTACTTAAACTTTATCAC+AGG | + | chr2_4:24609127-24609146 | Msa0322200:intron | 35.0% | |
| GTGTGCTTGAGATACTAATT+AGG | + | chr2_4:24609247-24609266 | Msa0322200:intron | 35.0% | |
| GAGATACTAATTAGGTCGAT+TGG | + | chr2_4:24609255-24609274 | Msa0322200:intron | 35.0% | |
| ! | TGACTTGTGTAATCTTTGGA+AGG | - | chr2_4:24609297-24609316 | None:intergenic | 35.0% |
| !!! | GAATTCTATTTTGGCAGCTA+CGG | + | chr2_4:24609336-24609355 | Msa0322200:intron | 35.0% |
| AAAAGTTGCCTCAATCGTAA+AGG | + | chr2_4:24609404-24609423 | Msa0322200:intron | 35.0% | |
| AAGGAAGAGTAGTAAACTTG+TGG | + | chr2_4:24609423-24609442 | Msa0322200:intron | 35.0% | |
| ! | CTCACCTAATGAAGATTTTG+TGG | - | chr2_4:24610117-24610136 | None:intergenic | 35.0% |
| CACAAAATCTTCATTAGGTG+AGG | + | chr2_4:24610115-24610134 | Msa0322200:intron | 35.0% | |
| CATTAGGTGAGGAAAAAAGA+TGG | + | chr2_4:24610126-24610145 | Msa0322200:intron | 35.0% | |
| GGTTTATGCAGATAAGTGAA+TGG | + | chr2_4:24610186-24610205 | Msa0322200:intron | 35.0% | |
| CGTTCTCTAATGCAATCTCT+TGG | + | chr2_4:24605381-24605400 | Msa0322200:CDS | 40.0% | |
| GATGCTCTCACATTTGTCTT+TGG | + | chr2_4:24605403-24605422 | Msa0322200:CDS | 40.0% | |
| GAATAGTCGTTTGTCCTTCT+TGG | + | chr2_4:24605570-24605589 | Msa0322200:intron | 40.0% | |
| ACACTCCCTAAAGAAGAACT+TGG | - | chr2_4:24605628-24605647 | None:intergenic | 40.0% | |
| AAAGTGATCTCTCGTGAATC+CGG | - | chr2_4:24605790-24605809 | None:intergenic | 40.0% | |
| TAAAAGCTAGTCCAGGAACA+CGG | - | chr2_4:24606023-24606042 | None:intergenic | 40.0% | |
| TGATTCCTAAAAGCTAGTCC+AGG | - | chr2_4:24606030-24606049 | None:intergenic | 40.0% | |
| TTTACAGGAAGCAAGGATCA+AGG | + | chr2_4:24606229-24606248 | Msa0322200:intron | 40.0% | |
| TCCCGTAAGTACAGTTCAAA+TGG | + | chr2_4:24606481-24606500 | Msa0322200:intron | 40.0% | |
| GAAGATGAAGATGATGAAGG+TGG | - | chr2_4:24606757-24606776 | None:intergenic | 40.0% | |
| ATGAGATCACTATCAACAGC+AGG | + | chr2_4:24606778-24606797 | Msa0322200:CDS | 40.0% | |
| GTAGGATCAGGTGAAAATTG+AGG | - | chr2_4:24606865-24606884 | None:intergenic | 40.0% | |
| ! | TTTATTCCTCCAAGTTGGGT+AGG | - | chr2_4:24606883-24606902 | None:intergenic | 40.0% |
| ! | TTTGAAACAGGTCTCATTGG+TGG | - | chr2_4:24606910-24606929 | None:intergenic | 40.0% |
| ! | GTGTTTGAAACAGGTCTCAT+TGG | - | chr2_4:24606913-24606932 | None:intergenic | 40.0% |
| ! | GGTAGTAGTGTGTTTGAAAC+AGG | - | chr2_4:24606922-24606941 | None:intergenic | 40.0% |
| ! | GGGGTGTAGATAGAACATTT+TGG | - | chr2_4:24607032-24607051 | None:intergenic | 40.0% |
| !! | AGGTTGATGTTGATGAGAAG+GGG | - | chr2_4:24607052-24607071 | None:intergenic | 40.0% |
| !! | GAGGTTGATGTTGATGAGAA+GGG | - | chr2_4:24607053-24607072 | None:intergenic | 40.0% |
| !! | TGAGGTTGATGTTGATGAGA+AGG | - | chr2_4:24607054-24607073 | None:intergenic | 40.0% |
| ! | TGTGCCACATAATTTTGCTG+AGG | - | chr2_4:24607072-24607091 | None:intergenic | 40.0% |
| ! | GATGAAGTTGATTACTCGAG+GGG | - | chr2_4:24607245-24607264 | None:intergenic | 40.0% |
| ! | CTTAGAGCATTACTTCCTCA+AGG | + | chr2_4:24607318-24607337 | Msa0322200:CDS | 40.0% |
| CGAATGTGAGATCTTGCTTA+AGG | - | chr2_4:24607637-24607656 | None:intergenic | 40.0% | |
| TCTCTACTCTACAAGATAGG+TGG | - | chr2_4:24607698-24607717 | None:intergenic | 40.0% | |
| GGAGACATTGAGATCTTTGA+TGG | + | chr2_4:24607912-24607931 | Msa0322200:CDS | 40.0% | |
| GGACTTGCAAGTAAACATGA+TGG | + | chr2_4:24608113-24608132 | Msa0322200:CDS | 40.0% | |
| ATCCTTTCTCACACTTGAGA+CGG | + | chr2_4:24608736-24608755 | Msa0322200:intron | 40.0% | |
| AAATAAGGCAATTGCTAGGG+TGG | - | chr2_4:24608976-24608995 | None:intergenic | 40.0% | |
| ! | CGACATAATAATGGGGTTCT+AGG | - | chr2_4:24609155-24609174 | None:intergenic | 40.0% |
| CTACTCTTCCTTTACGATTG+AGG | - | chr2_4:24609415-24609434 | None:intergenic | 40.0% | |
| TCTGCATAAACCACCAAAAC+TGG | - | chr2_4:24610178-24610197 | None:intergenic | 40.0% | |
| ! | AATTCAGTTCTGACGGCTAC+AGG | - | chr2_4:24605357-24605376 | None:intergenic | 45.0% |
| AGTCGTTTGTCCTTCTTGGA+TGG | + | chr2_4:24605574-24605593 | Msa0322200:intron | 45.0% | |
| AGATTCGCTCTTCAACCTTG+TGG | + | chr2_4:24605816-24605835 | Msa0322200:intron | 45.0% | |
| CTCTTCAACCTTGTGGTTCT+CGG | + | chr2_4:24605823-24605842 | Msa0322200:intron | 45.0% | |
| !!! | GTTTTGTTTAGCCGTGTTCC+TGG | + | chr2_4:24606009-24606028 | Msa0322200:intron | 45.0% |
| !!! | GTGTTCCTGGACTAGCTTTT+AGG | + | chr2_4:24606022-24606041 | Msa0322200:CDS | 45.0% |
| ! | GTTTTCATGGGGTGCAACAA+AGG | + | chr2_4:24606339-24606358 | Msa0322200:CDS | 45.0% |
| AATTGAGGTGGAGAAGTTCC+AGG | - | chr2_4:24606850-24606869 | None:intergenic | 45.0% | |
| GGATCAGGTGAAAATTGAGG+TGG | - | chr2_4:24606862-24606881 | None:intergenic | 45.0% | |
| ! | GGTTGATGTTGATGAGAAGG+GGG | - | chr2_4:24607051-24607070 | None:intergenic | 45.0% |
| CATCCAGAAGCTAGTGCATT+TGG | + | chr2_4:24607090-24607109 | Msa0322200:CDS | 45.0% | |
| ! | CTTCCAAATGCACTAGCTTC+TGG | - | chr2_4:24607096-24607115 | None:intergenic | 45.0% |
| CAGAAGCTAGTGCATTTGGA+AGG | + | chr2_4:24607094-24607113 | Msa0322200:CDS | 45.0% | |
| GTACGTACCTTAGTTCCTTG+AGG | - | chr2_4:24607336-24607355 | None:intergenic | 45.0% | |
| TGCGCAACCGACAAAAAACA+TGG | + | chr2_4:24607781-24607800 | Msa0322200:intron | 45.0% | |
| CTGAGTAATCCTTAGCCTGA+AGG | - | chr2_4:24608271-24608290 | None:intergenic | 45.0% | |
| CTTCAGGCTAAGGATTACTC+AGG | + | chr2_4:24608269-24608288 | Msa0322200:CDS | 45.0% | |
| AGACGGTGACTCAAAACATG+AGG | + | chr2_4:24608753-24608772 | Msa0322200:intron | 45.0% | |
| GACGGTGACTCAAAACATGA+GGG | + | chr2_4:24608754-24608773 | Msa0322200:intron | 45.0% | |
| AGCATGTCTCATTGCGATGT+CGG | + | chr2_4:24609829-24609848 | Msa0322200:intron | 45.0% | |
| !!! | AAATTAAATTTTAATATTCA+TGG | + | chr2_4:24608525-24608544 | Msa0322200:intron | 5.0% |
| !! | AAAAAAAAAAAATTATAAAC+GGG | - | chr2_4:24608601-24608620 | None:intergenic | 5.0% |
| !!! | ATATATATTTTTTTTTTTGA+AGG | + | chr2_4:24609658-24609677 | Msa0322200:intron | 5.0% |
| !!! | ATTTATATTAATTTTTTTAG+AGG | + | chr2_4:24609709-24609728 | Msa0322200:intron | 5.0% |
| ! | AGTTCTGACGGCTACAGGAA+GGG | - | chr2_4:24605352-24605371 | None:intergenic | 50.0% |
| TGCGCAGGCGGATATTCAAA+CGG | + | chr2_4:24606672-24606691 | Msa0322200:intron | 50.0% | |
| TCACCTGATCCTACCCAACT+TGG | + | chr2_4:24606871-24606890 | Msa0322200:CDS | 50.0% | |
| GATCTGAGTGGGACTAGACT+CGG | + | chr2_4:24607608-24607627 | Msa0322200:intron | 50.0% | |
| ! | CGTGCGAGTTTTGCACGTAA+CGG | + | chr2_4:24608056-24608075 | Msa0322200:CDS | 50.0% |
| ! | GTGCGAGTTTTGCACGTAAC+GGG | + | chr2_4:24608057-24608076 | Msa0322200:CDS | 50.0% |
| ! | TGCGAGTTTTGCACGTAACG+GGG | + | chr2_4:24608058-24608077 | Msa0322200:CDS | 50.0% |
| CACCGTCTCAAGTGTGAGAA+AGG | - | chr2_4:24608741-24608760 | None:intergenic | 50.0% | |
| GCAGATAAGTGAATGGGACG+AGG | + | chr2_4:24610193-24610212 | Msa0322200:intron | 50.0% | |
| TCTTCTCACTGCTTCCTGGA+AGG | - | chr2_4:24610222-24610241 | None:intergenic | 50.0% | |
| ! | CAGTTCTGACGGCTACAGGA+AGG | - | chr2_4:24605353-24605372 | None:intergenic | 55.0% |
| GTCTCGAACCGAGAACCACA+AGG | - | chr2_4:24605834-24605853 | None:intergenic | 55.0% | |
| CCTGCGCAGCCGAAAAAATG+TGG | - | chr2_4:24606660-24606679 | None:intergenic | 55.0% | |
| !!! | CCACATTTTTTCGGCTGCGC+AGG | + | chr2_4:24606657-24606676 | Msa0322200:intron | 55.0% |
| !!! | CATTTTTTCGGCTGCGCAGG+CGG | + | chr2_4:24606660-24606679 | Msa0322200:intron | 55.0% |
| TGAGGTGGAGAAGTTCCAGG+TGG | - | chr2_4:24606847-24606866 | None:intergenic | 55.0% | |
| ! | CCTCCAAGTTGGGTAGGATC+AGG | - | chr2_4:24606877-24606896 | None:intergenic | 55.0% |
| CCTGATCCTACCCAACTTGG+AGG | + | chr2_4:24606874-24606893 | Msa0322200:CDS | 55.0% | |
| CCACTCTTCTCACTGCTTCC+TGG | - | chr2_4:24610226-24610245 | None:intergenic | 55.0% | |
| CCAGGAAGCAGTGAGAAGAG+TGG | + | chr2_4:24610223-24610242 | Msa0322200:CDS | 55.0% | |
| ATGGGACGAGGAAGCCTTCC+AGG | + | chr2_4:24610205-24610224 | Msa0322200:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 24605333 | 24610286 | 24605333 | ID=Msa0322200;Name=Msa0322200 |
| chr2_4 | mRNA | 24605333 | 24610286 | 24605333 | ID=Msa0322200-mRNA-1;Parent=Msa0322200;Name=Msa0322200-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.14|0|1|1|1|8|0|531 |
| chr2_4 | exon | 24605333 | 24605448 | 24605333 | ID=Msa0322200-mRNA-1:exon:8802;Parent=Msa0322200-mRNA-1 |
| chr2_4 | exon | 24605576 | 24605701 | 24605576 | ID=Msa0322200-mRNA-1:exon:8803;Parent=Msa0322200-mRNA-1 |
| chr2_4 | exon | 24606020 | 24606125 | 24606020 | ID=Msa0322200-mRNA-1:exon:8804;Parent=Msa0322200-mRNA-1 |
| chr2_4 | exon | 24606236 | 24606250 | 24606236 | ID=Msa0322200-mRNA-1:exon:8805;Parent=Msa0322200-mRNA-1 |
| chr2_4 | exon | 24606333 | 24606395 | 24606333 | ID=Msa0322200-mRNA-1:exon:8806;Parent=Msa0322200-mRNA-1 |
| chr2_4 | exon | 24606679 | 24607347 | 24606679 | ID=Msa0322200-mRNA-1:exon:8807;Parent=Msa0322200-mRNA-1 |
| chr2_4 | exon | 24607880 | 24608290 | 24607880 | ID=Msa0322200-mRNA-1:exon:8808;Parent=Msa0322200-mRNA-1 |
| chr2_4 | exon | 24610197 | 24610286 | 24610197 | ID=Msa0322200-mRNA-1:exon:8809;Parent=Msa0322200-mRNA-1 |
| chr2_4 | CDS | 24605333 | 24605448 | 24605333 | ID=Msa0322200-mRNA-1:cds;Parent=Msa0322200-mRNA-1 |
| chr2_4 | CDS | 24605576 | 24605701 | 24605576 | ID=Msa0322200-mRNA-1:cds;Parent=Msa0322200-mRNA-1 |
| chr2_4 | CDS | 24606020 | 24606125 | 24606020 | ID=Msa0322200-mRNA-1:cds;Parent=Msa0322200-mRNA-1 |
| chr2_4 | CDS | 24606236 | 24606250 | 24606236 | ID=Msa0322200-mRNA-1:cds;Parent=Msa0322200-mRNA-1 |
| chr2_4 | CDS | 24606333 | 24606395 | 24606333 | ID=Msa0322200-mRNA-1:cds;Parent=Msa0322200-mRNA-1 |
| chr2_4 | CDS | 24606679 | 24607347 | 24606679 | ID=Msa0322200-mRNA-1:cds;Parent=Msa0322200-mRNA-1 |
| chr2_4 | CDS | 24607880 | 24608290 | 24607880 | ID=Msa0322200-mRNA-1:cds;Parent=Msa0322200-mRNA-1 |
| chr2_4 | CDS | 24610197 | 24610286 | 24610197 | ID=Msa0322200-mRNA-1:cds;Parent=Msa0322200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
