Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202380 | XP_024631492.1 | 94.434 | 539 | 18 | 3 | 1 | 539 | 1 | 527 | 0.0 | 1025 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202380 | sp|Q9LTS4|BH041_ARATH | 35.521 | 518 | 237 | 17 | 44 | 531 | 14 | 464 | 3.68e-58 | 203 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202380 | G7IIK8 | 93.506 | 539 | 18 | 3 | 1 | 539 | 1 | 522 | 0.0 | 1011 |
Gene ID | Type | Classification |
---|---|---|
Msa0202380 | TF | bHLH |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026420 | Msa0202380 | 0.836113 | 1.132103e-56 | -8.615850e-47 |
Msa0030800 | Msa0202380 | 0.803860 | 2.848802e-49 | -8.615850e-47 |
Msa0046680 | Msa0202380 | 0.804821 | 1.796649e-49 | -8.615850e-47 |
Msa0051480 | Msa0202380 | 0.831862 | 1.312113e-55 | -8.615850e-47 |
Msa0051620 | Msa0202380 | 0.822885 | 1.864588e-53 | -8.615850e-47 |
Msa0051730 | Msa0202380 | 0.825773 | 3.904536e-54 | -8.615850e-47 |
Msa0071470 | Msa0202380 | 0.823264 | 1.521095e-53 | -8.615850e-47 |
Msa0104810 | Msa0202380 | 0.824753 | 6.804937e-54 | -8.615850e-47 |
Msa0107830 | Msa0202380 | 0.804860 | 1.763844e-49 | -8.615850e-47 |
Msa0129290 | Msa0202380 | 0.800688 | 1.281451e-48 | -8.615850e-47 |
Msa0143640 | Msa0202380 | 0.879476 | 1.208071e-69 | -8.615850e-47 |
Msa0146090 | Msa0202380 | 0.813868 | 2.058074e-51 | -8.615850e-47 |
Msa0146200 | Msa0202380 | 0.831781 | 1.373773e-55 | -8.615850e-47 |
Msa0150620 | Msa0202380 | 0.828723 | 7.670020e-55 | -8.615850e-47 |
Msa0153860 | Msa0202380 | 0.820699 | 5.975527e-53 | -8.615850e-47 |
Msa0161560 | Msa0202380 | 0.812990 | 3.209967e-51 | -8.615850e-47 |
Msa0162680 | Msa0202380 | 0.840217 | 9.932183e-58 | -8.615850e-47 |
Msa0167160 | Msa0202380 | -0.800058 | 1.721960e-48 | -8.615850e-47 |
Msa0185100 | Msa0202380 | 0.846311 | 2.351779e-59 | -8.615850e-47 |
Msa0186240 | Msa0202380 | 0.861937 | 7.222473e-64 | -8.615850e-47 |
Msa0193190 | Msa0202380 | 0.846046 | 2.777395e-59 | -8.615850e-47 |
Msa0202380 | Msa0204170 | 0.824122 | 9.577811e-54 | -8.615850e-47 |
Msa0202380 | Msa0214150 | 0.823079 | 1.680190e-53 | -8.615850e-47 |
Msa0202380 | Msa0218090 | 0.814960 | 1.180488e-51 | -8.615850e-47 |
Msa0202380 | Msa0242720 | 0.840578 | 7.990653e-58 | -8.615850e-47 |
Msa0202380 | Msa0245400 | 0.899793 | 1.393047e-77 | -8.615850e-47 |
Msa0202380 | Msa0246140 | 0.833899 | 4.089874e-56 | -8.615850e-47 |
Msa0202380 | Msa0253960 | 0.822010 | 2.977161e-53 | -8.615850e-47 |
Msa0202380 | Msa0254640 | 0.801054 | 1.078768e-48 | -8.615850e-47 |
Msa0202380 | Msa0265480 | 0.808484 | 3.027945e-50 | -8.615850e-47 |
Msa0202380 | Msa0265650 | 0.801033 | 1.089616e-48 | -8.615850e-47 |
Msa0202380 | Msa0267700 | 0.800674 | 1.289885e-48 | -8.615850e-47 |
Msa0202380 | Msa0267900 | 0.809036 | 2.308031e-50 | -8.615850e-47 |
Msa0202380 | Msa0273070 | 0.847845 | 8.933471e-60 | -8.615850e-47 |
Msa0202380 | Msa0284730 | 0.802859 | 4.592983e-49 | -8.615850e-47 |
Msa0202380 | Msa0299340 | 0.809406 | 1.921893e-50 | -8.615850e-47 |
Msa0202380 | Msa0306310 | 0.827016 | 1.974736e-54 | -8.615850e-47 |
Msa0202380 | Msa0319680 | 0.807551 | 4.782068e-50 | -8.615850e-47 |
Msa0202380 | Msa0322200 | 0.812199 | 4.780901e-51 | -8.615850e-47 |
Msa0202380 | Msa0324810 | 0.822133 | 2.787473e-53 | -8.615850e-47 |
Msa0202380 | Msa0332360 | 0.807893 | 4.046496e-50 | -8.615850e-47 |
Msa0202380 | Msa0340370 | 0.822239 | 2.634980e-53 | -8.615850e-47 |
Msa0202380 | Msa0345890 | 0.824964 | 6.066448e-54 | -8.615850e-47 |
Msa0202380 | Msa0345980 | 0.866740 | 2.284955e-65 | -8.615850e-47 |
Msa0202380 | Msa0353010 | 0.817915 | 2.574372e-52 | -8.615850e-47 |
Msa0202380 | Msa0378320 | 0.810363 | 1.196386e-50 | -8.615850e-47 |
Msa0202380 | Msa0383900 | 0.848771 | 4.957454e-60 | -8.615850e-47 |
Msa0202380 | Msa0390170 | 0.810296 | 1.236718e-50 | -8.615850e-47 |
Msa0202380 | Msa0390200 | 0.818863 | 1.570055e-52 | -8.615850e-47 |
Msa0202380 | Msa0390790 | 0.804191 | 2.431481e-49 | -8.615850e-47 |
Msa0202380 | Msa0393100 | 0.879984 | 7.974596e-70 | -8.615850e-47 |
Msa0202380 | Msa0400010 | 0.810818 | 9.539181e-51 | -8.615850e-47 |
Msa0202380 | Msa0402800 | 0.846376 | 2.258831e-59 | -8.615850e-47 |
Msa0202380 | Msa0405210 | 0.823720 | 1.189761e-53 | -8.615850e-47 |
Msa0202380 | Msa0421080 | 0.805040 | 1.617320e-49 | -8.615850e-47 |
Msa0202380 | Msa0427660 | 0.808834 | 2.548760e-50 | -8.615850e-47 |
Msa0202380 | Msa0434300 | 0.852533 | 4.336165e-61 | -8.615850e-47 |
Msa0202380 | Msa0434400 | 0.864131 | 1.516505e-64 | -8.615850e-47 |
Msa0202380 | Msa0438070 | 0.829928 | 3.912762e-55 | -8.615850e-47 |
Msa0202380 | Msa0441750 | 0.809879 | 1.521172e-50 | -8.615850e-47 |
Msa0202380 | Msa0443450 | 0.829246 | 5.730318e-55 | -8.615850e-47 |
Msa0202380 | Msa0447160 | 0.844201 | 8.755424e-59 | -8.615850e-47 |
Msa0202380 | Msa0449490 | 0.803719 | 3.048431e-49 | -8.615850e-47 |
Msa0202380 | Msa0449620 | 0.829215 | 5.829945e-55 | -8.615850e-47 |
Msa0202380 | Msa0460600 | 0.817975 | 2.494942e-52 | -8.615850e-47 |
Msa0202380 | Msa0466850 | 0.807386 | 5.183920e-50 | -8.615850e-47 |
Msa0202380 | Msa0478080 | 0.843665 | 1.218279e-58 | -8.615850e-47 |
Msa0202380 | Msa0480530 | 0.804854 | 1.768366e-49 | -8.615850e-47 |
Msa0202380 | Msa0480540 | 0.861259 | 1.163163e-63 | -8.615850e-47 |
Msa0202380 | Msa0480550 | 0.871399 | 7.042178e-67 | -8.615850e-47 |
Msa0202380 | Msa0481440 | 0.809566 | 1.776351e-50 | -8.615850e-47 |
Msa0202380 | Msa0488580 | 0.878649 | 2.367327e-69 | -8.615850e-47 |
Msa0202380 | Msa0493870 | 0.837198 | 5.988827e-57 | -8.615850e-47 |
Msa0202380 | Msa0497860 | 0.858111 | 1.030907e-62 | -8.615850e-47 |
Msa0202380 | Msa0500770 | 0.805415 | 1.349686e-49 | -8.615850e-47 |
Msa0202380 | Msa0510870 | 0.827017 | 1.973215e-54 | -8.615850e-47 |
Msa0202380 | Msa0513670 | 0.811578 | 6.528793e-51 | -8.615850e-47 |
Msa0202380 | Msa0522140 | 0.858927 | 5.887097e-63 | -8.615850e-47 |
Msa0202380 | Msa0522170 | 0.862245 | 5.808885e-64 | -8.615850e-47 |
Msa0202380 | Msa0548790 | 0.808683 | 2.745381e-50 | -8.615850e-47 |
Msa0202380 | Msa0550980 | -0.815630 | 8.378375e-52 | -8.615850e-47 |
Msa0202380 | Msa0554770 | -0.801770 | 7.696255e-49 | -8.615850e-47 |
Msa0202380 | Msa0556270 | 0.809989 | 1.440601e-50 | -8.615850e-47 |
Msa0202380 | Msa0557240 | 0.803547 | 3.308671e-49 | -8.615850e-47 |
Msa0202380 | Msa0557250 | 0.839201 | 1.825487e-57 | -8.615850e-47 |
Msa0202380 | Msa0561110 | 0.843433 | 1.405616e-58 | -8.615850e-47 |
Msa0202380 | Msa0565180 | 0.803712 | 3.057929e-49 | -8.615850e-47 |
Msa0202380 | Msa0568110 | 0.818991 | 1.467819e-52 | -8.615850e-47 |
Msa0202380 | Msa0570460 | 0.820077 | 8.298467e-53 | -8.615850e-47 |
Msa0202380 | Msa0580840 | 0.868940 | 4.494120e-66 | -8.615850e-47 |
Msa0202380 | Msa0589060 | 0.812641 | 3.827692e-51 | -8.615850e-47 |
Msa0202380 | Msa0606340 | -0.811773 | 5.919170e-51 | -8.615850e-47 |
Msa0202380 | Msa0614960 | 0.801493 | 8.774531e-49 | -8.615850e-47 |
Msa0202380 | Msa0615200 | 0.825263 | 5.156558e-54 | -8.615850e-47 |
Msa0202380 | Msa0652590 | 0.824719 | 6.932531e-54 | -8.615850e-47 |
Msa0202380 | Msa0652600 | 0.847254 | 1.298702e-59 | -8.615850e-47 |
Msa0202380 | Msa0657340 | 0.815346 | 9.689305e-52 | -8.615850e-47 |
Msa0202380 | Msa0666950 | 0.802992 | 4.311642e-49 | -8.615850e-47 |
Msa0202380 | Msa0675590 | 0.807293 | 5.425328e-50 | -8.615850e-47 |
Msa0202380 | Msa0690100 | -0.813673 | 2.272855e-51 | -8.615850e-47 |
Msa0202380 | Msa0694320 | 0.820393 | 7.024447e-53 | -8.615850e-47 |
Msa0202380 | Msa0698280 | 0.816772 | 4.653959e-52 | -8.615850e-47 |
Msa0202380 | Msa0699170 | 0.819319 | 1.236423e-52 | -8.615850e-47 |
Msa0202380 | Msa0704560 | 0.840287 | 9.524482e-58 | -8.615850e-47 |
Msa0202380 | Msa0713060 | 0.802646 | 5.082810e-49 | -8.615850e-47 |
Msa0202380 | Msa0715040 | 0.844822 | 5.956578e-59 | -8.615850e-47 |
Msa0202380 | Msa0716620 | 0.834648 | 2.654426e-56 | -8.615850e-47 |
Msa0202380 | Msa0725580 | 0.818495 | 1.902544e-52 | -8.615850e-47 |
Msa0202380 | Msa0731580 | 0.816560 | 5.192629e-52 | -8.615850e-47 |
Msa0202380 | Msa0740630 | 0.819692 | 1.016050e-52 | -8.615850e-47 |
Msa0202380 | Msa0744540 | 0.805332 | 1.404639e-49 | -8.615850e-47 |
Msa0202380 | Msa0744550 | 0.860167 | 2.494622e-63 | -8.615850e-47 |
Msa0202380 | Msa0744560 | 0.867933 | 9.492392e-66 | -8.615850e-47 |
Msa0202380 | Msa0746340 | 0.821068 | 4.915045e-53 | -8.615850e-47 |
Msa0202380 | Msa0765140 | 0.820956 | 5.215867e-53 | -8.615850e-47 |
Msa0202380 | Msa0772350 | 0.800309 | 1.530749e-48 | -8.615850e-47 |
Msa0202380 | Msa0772490 | 0.803403 | 3.544522e-49 | -8.615850e-47 |
Msa0202380 | Msa0781210 | 0.815367 | 9.585411e-52 | -8.615850e-47 |
Msa0202380 | Msa0795320 | 0.822684 | 2.076540e-53 | -8.615850e-47 |
Msa0202380 | Msa0804870 | 0.812506 | 4.097407e-51 | -8.615850e-47 |
Msa0202380 | Msa0806910 | 0.824521 | 7.717879e-54 | -8.615850e-47 |
Msa0202380 | Msa0809920 | 0.802121 | 6.519229e-49 | -8.615850e-47 |
Msa0202380 | Msa0816630 | 0.819721 | 1.000799e-52 | -8.615850e-47 |
Msa0202380 | Msa0819150 | 0.801115 | 1.048566e-48 | -8.615850e-47 |
Msa0202380 | Msa0820880 | 0.824765 | 6.760274e-54 | -8.615850e-47 |
Msa0202380 | Msa0826240 | 0.800272 | 1.557613e-48 | -8.615850e-47 |
Msa0202380 | Msa0826360 | 0.827067 | 1.919750e-54 | -8.615850e-47 |
Msa0202380 | Msa0826370 | 0.845618 | 3.630201e-59 | -8.615850e-47 |
Msa0202380 | Msa0826380 | 0.846930 | 1.593517e-59 | -8.615850e-47 |
Msa0202380 | Msa0826450 | 0.843777 | 1.137547e-58 | -8.615850e-47 |
Msa0202380 | Msa0829250 | -0.800787 | 1.223495e-48 | -8.615850e-47 |
Msa0202380 | Msa0829990 | 0.809877 | 1.523055e-50 | -8.615850e-47 |
Msa0202380 | Msa0832950 | 0.809932 | 1.481547e-50 | -8.615850e-47 |
Msa0202380 | Msa0843740 | 0.807929 | 3.974585e-50 | -8.615850e-47 |
Msa0202380 | Msa0848020 | 0.829102 | 6.212204e-55 | -8.615850e-47 |
Msa0202380 | Msa0859040 | 0.823000 | 1.752834e-53 | -8.615850e-47 |
Msa0202380 | Msa0863940 | 0.824376 | 8.347339e-54 | -8.615850e-47 |
Msa0202380 | Msa0865810 | 0.865719 | 4.815179e-65 | -8.615850e-47 |
Msa0202380 | Msa0865820 | 0.854559 | 1.135303e-61 | -8.615850e-47 |
Msa0202380 | Msa0865830 | 0.847255 | 1.298309e-59 | -8.615850e-47 |
Msa0202380 | Msa0867610 | 0.809247 | 2.078911e-50 | -8.615850e-47 |
Msa0202380 | Msa0873940 | 0.826379 | 2.802087e-54 | -8.615850e-47 |
Msa0202380 | Msa0901270 | 0.838678 | 2.492914e-57 | -8.615850e-47 |
Msa0202380 | Msa0901290 | 0.807053 | 6.098505e-50 | -8.615850e-47 |
Msa0202380 | Msa0921790 | 0.806096 | 9.708943e-50 | -8.615850e-47 |
Msa0202380 | Msa0945330 | 0.835873 | 1.302292e-56 | -8.615850e-47 |
Msa0202380 | Msa1001120 | 0.860152 | 2.521329e-63 | -8.615850e-47 |
Msa0202380 | Msa1002550 | -0.804093 | 2.548934e-49 | -8.615850e-47 |
Msa0202380 | Msa1003920 | 0.806761 | 7.030792e-50 | -8.615850e-47 |
Msa0202380 | Msa1025750 | 0.807081 | 6.016566e-50 | -8.615850e-47 |
Msa0202380 | Msa1026890 | 0.807077 | 6.028432e-50 | -8.615850e-47 |
Msa0202380 | Msa1027340 | 0.830744 | 2.471104e-55 | -8.615850e-47 |
Msa0202380 | Msa1027400 | 0.836155 | 1.104637e-56 | -8.615850e-47 |
Msa0202380 | Msa1027910 | 0.852135 | 5.629064e-61 | -8.615850e-47 |
Msa0202380 | Msa1030200 | 0.806270 | 8.924200e-50 | -8.615850e-47 |
Msa0202380 | Msa1030210 | 0.871711 | 5.550674e-67 | -8.615850e-47 |
Msa0202380 | Msa1031780 | 0.825383 | 4.830671e-54 | -8.615850e-47 |
Msa0202380 | Msa1035050 | 0.815100 | 1.099034e-51 | -8.615850e-47 |
Msa0202380 | Msa1041250 | 0.829514 | 4.933920e-55 | -8.615850e-47 |
Msa0202380 | Msa1064240 | 0.828162 | 1.047842e-54 | -8.615850e-47 |
Msa0202380 | Msa1069250 | 0.875109 | 3.993273e-68 | -8.615850e-47 |
Msa0202380 | Msa1071350 | 0.815538 | 8.783072e-52 | -8.615850e-47 |
Msa0202380 | Msa1075090 | 0.834403 | 3.058080e-56 | -8.615850e-47 |
Msa0202380 | Msa1077970 | 0.850466 | 1.667572e-60 | -8.615850e-47 |
Msa0202380 | Msa1080820 | 0.803476 | 3.422925e-49 | -8.615850e-47 |
Msa0202380 | Msa1084890 | 0.829288 | 5.597262e-55 | -8.615850e-47 |
Msa0202380 | Msa1095590 | 0.840029 | 1.111721e-57 | -8.615850e-47 |
Msa0202380 | Msa1102210 | 0.810134 | 1.340415e-50 | -8.615850e-47 |
Msa0202380 | Msa1110900 | 0.838622 | 2.578015e-57 | -8.615850e-47 |
Msa0202380 | Msa1115980 | 0.835483 | 1.635052e-56 | -8.615850e-47 |
Msa0202380 | Msa1117770 | -0.800966 | 1.124557e-48 | -8.615850e-47 |
Msa0202380 | Msa1118720 | 0.805888 | 1.073996e-49 | -8.615850e-47 |
Msa0202380 | Msa1118960 | 0.805594 | 1.238120e-49 | -8.615850e-47 |
Msa0202380 | Msa1120580 | 0.866917 | 2.007587e-65 | -8.615850e-47 |
Msa0202380 | Msa1131120 | 0.811717 | 6.087401e-51 | -8.615850e-47 |
Msa0202380 | Msa1142390 | 0.823452 | 1.374924e-53 | -8.615850e-47 |
Msa0202380 | Msa1150920 | 0.809458 | 1.873785e-50 | -8.615850e-47 |
Msa0202380 | Msa1154240 | 0.817705 | 2.871268e-52 | -8.615850e-47 |
Msa0202380 | Msa1154570 | 0.832777 | 7.788115e-56 | -8.615850e-47 |
Msa0202380 | Msa1157110 | 0.864191 | 1.452571e-64 | -8.615850e-47 |
Msa0202380 | Msa1162430 | 0.801338 | 9.438156e-49 | -8.615850e-47 |
Msa0202380 | Msa1165670 | 0.803268 | 3.781292e-49 | -8.615850e-47 |
Msa0202380 | Msa1174280 | 0.866823 | 2.151532e-65 | -8.615850e-47 |
Msa0202380 | Msa1179340 | 0.814608 | 1.413125e-51 | -8.615850e-47 |
Msa0202380 | Msa1180430 | 0.812185 | 4.813669e-51 | -8.615850e-47 |
Msa0202380 | Msa1184400 | 0.809240 | 2.086391e-50 | -8.615850e-47 |
Msa0202380 | Msa1185270 | 0.820631 | 6.194838e-53 | -8.615850e-47 |
Msa0202380 | Msa1202110 | 0.837026 | 6.626194e-57 | -8.615850e-47 |
Msa0202380 | Msa1203810 | 0.820404 | 6.984037e-53 | -8.615850e-47 |
Msa0202380 | Msa1211610 | 0.847771 | 9.365360e-60 | -8.615850e-47 |
Msa0202380 | Msa1223560 | 0.802591 | 5.216214e-49 | -8.615850e-47 |
Msa0202380 | Msa1224510 | 0.816174 | 6.333857e-52 | -8.615850e-47 |
Msa0202380 | Msa1231980 | 0.806227 | 9.113771e-50 | -8.615850e-47 |
Msa0202380 | Msa1239940 | 0.807641 | 4.577644e-50 | -8.615850e-47 |
Msa0202380 | Msa1254870 | 0.836066 | 1.163077e-56 | -8.615850e-47 |
Msa0202380 | Msa1281300 | 0.819180 | 1.329952e-52 | -8.615850e-47 |
Msa0202380 | Msa1299480 | 0.845774 | 3.292967e-59 | -8.615850e-47 |
Msa0202380 | Msa1315880 | -0.804328 | 2.277529e-49 | -8.615850e-47 |
Msa0202380 | Msa1319760 | 0.812043 | 5.169945e-51 | -8.615850e-47 |
Msa0202380 | Msa1320430 | 0.801316 | 9.538579e-49 | -8.615850e-47 |
Msa0202380 | Msa1328430 | 0.836432 | 9.391988e-57 | -8.615850e-47 |
Msa0202380 | Msa1333700 | 0.809572 | 1.770699e-50 | -8.615850e-47 |
Msa0202380 | Msa1349830 | 0.804606 | 1.992423e-49 | -8.615850e-47 |
Msa0202380 | Msa1359770 | 0.814387 | 1.581144e-51 | -8.615850e-47 |
Msa0202380 | Msa1366480 | 0.827036 | 1.952468e-54 | -8.615850e-47 |
Msa0202380 | Msa1369450 | 0.804021 | 2.638586e-49 | -8.615850e-47 |
Msa0202380 | Msa1377050 | 0.822043 | 2.926132e-53 | -8.615850e-47 |
Msa0202380 | Msa1387610 | 0.817685 | 2.901301e-52 | -8.615850e-47 |
Msa0202380 | Msa1398120 | 0.820455 | 6.797403e-53 | -8.615850e-47 |
Msa0202380 | Msa1398140 | 0.818976 | 1.479693e-52 | -8.615850e-47 |
Msa0202380 | Msa1401110 | 0.839559 | 1.473523e-57 | -8.615850e-47 |
Msa0202380 | Msa1410480 | -0.800008 | 1.763151e-48 | -8.615850e-47 |
Msa0202380 | Msa1410500 | -0.801268 | 9.755741e-49 | -8.615850e-47 |
Msa0202380 | Msa1420540 | 0.802417 | 5.665289e-49 | -8.615850e-47 |
Msa0202380 | Msa1422230 | 0.820291 | 7.412117e-53 | -8.615850e-47 |
Msa0202380 | Msa1427000 | 0.844914 | 5.625801e-59 | -8.615850e-47 |
Msa0202380 | Msa1434860 | -0.800064 | 1.716879e-48 | -8.615850e-47 |
Msa0202380 | Msa1435320 | 0.815609 | 8.467827e-52 | -8.615850e-47 |
Msa0202380 | Msa1438160 | 0.816013 | 6.883855e-52 | -8.615850e-47 |
Msa0202380 | Msa1439780 | 0.839726 | 1.333642e-57 | -8.615850e-47 |
Msa0202380 | Msa1443400 | 0.812596 | 3.915122e-51 | -8.615850e-47 |
Msa0202380 | Msa1448040 | 0.813142 | 2.972949e-51 | -8.615850e-47 |
Msa0202380 | Msa1449470 | 0.802490 | 5.472483e-49 | -8.615850e-47 |
Msa0202380 | Msa1453600 | 0.804183 | 2.441757e-49 | -8.615850e-47 |
Msa0202380 | Msa1459920 | 0.872766 | 2.470703e-67 | -8.615850e-47 |
Msa0202380 | Msa1459930 | 0.828181 | 1.036793e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202380 | MtrunA17_Chr2g0299471 | 94.336 | 459 | 14 | 3 | 81 | 539 | 6 | 452 | 0.0 | 865 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0202380 | AT5G56960.2 | 39.241 | 553 | 263 | 19 | 11 | 531 | 12 | 523 | 3.55e-86 | 276 |
Msa0202380 | AT5G56960.1 | 35.521 | 518 | 237 | 17 | 44 | 531 | 14 | 464 | 3.74e-59 | 203 |
Find 96 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATGTATTGATTCGATTAT+TGG | 0.081677 | 2_1:+24755994 | Msa0202380:CDS |
CTAAAATTTGACCCTATATT+AGG | 0.183433 | 2_1:-24755040 | None:intergenic |
ATCACGTGAGTCATATATTT+TGG | 0.219439 | 2_1:-24758055 | None:intergenic |
GATGCTCTCACATTTGTCTT+TGG | 0.245611 | 2_1:+24753329 | Msa0202380:CDS |
GAATAGTCGTTTGTCCTTCT+TGG | 0.247039 | 2_1:+24753497 | Msa0202380:intron |
AAATATATACTTTGATAATA+TGG | 0.249981 | 2_1:-24753362 | None:intergenic |
CAATTACCAAGTTCTTCTTT+AGG | 0.263208 | 2_1:+24753546 | Msa0202380:CDS |
AATTACCAAGTTCTTCTTTA+GGG | 0.266258 | 2_1:+24753547 | Msa0202380:CDS |
CCACTCTTCTCACTGCTTCC+TGG | 0.304864 | 2_1:-24758004 | None:intergenic |
TCATTCTCAATTTGTGTTGT+AGG | 0.322222 | 2_1:-24754893 | None:intergenic |
CTTCCAAATGCACTAGCTTC+TGG | 0.330949 | 2_1:-24754998 | None:intergenic |
TACTTCATCAAATAACCTTC+AGG | 0.345353 | 2_1:+24756095 | Msa0202380:CDS |
CATGATAAAAGTCCTAATAT+AGG | 0.347025 | 2_1:+24755028 | Msa0202380:CDS |
CTCCTTAGCTGTTATCAGTA+TGG | 0.357487 | 2_1:-24755735 | None:intergenic |
AATATGAGAGATGAGTATTC+AGG | 0.359714 | 2_1:-24754716 | None:intergenic |
CATCCAGAAGCTAGTGCATT+TGG | 0.365951 | 2_1:+24754995 | Msa0202380:CDS |
ATGGGACGAGGAAGCCTTCC+AGG | 0.369330 | 2_1:+24757986 | Msa0202380:CDS |
GGTAGTAATGTGTTTGAAAC+AGG | 0.374921 | 2_1:-24754824 | None:intergenic |
ATGATAAAAGTCCTAATATA+GGG | 0.380695 | 2_1:+24755029 | Msa0202380:CDS |
GGAGACATTGAGATCTTTGA+TGG | 0.383429 | 2_1:+24755754 | Msa0202380:CDS |
AGAATTGATGTCACAACAAT+TGG | 0.385231 | 2_1:+24755808 | Msa0202380:CDS |
CATTCTCAATTTGTGTTGTA+GGG | 0.390206 | 2_1:-24754892 | None:intergenic |
TTTACTCCTCCAAGTTGGTT+AGG | 0.398273 | 2_1:-24754785 | None:intergenic |
ACATGTCAACTTGGTTTCAA+TGG | 0.402871 | 2_1:+24756036 | Msa0202380:CDS |
CTACTTAGAGCTGCAACAAT+TGG | 0.411814 | 2_1:+24753984 | Msa0202380:CDS |
ATCAAATAACCTTCAGGCTA+AGG | 0.429025 | 2_1:+24756101 | Msa0202380:CDS |
AATTCAGTTCTGACGGCTAC+AGG | 0.433952 | 2_1:-24753280 | None:intergenic |
CAATTGTTGCAGCTCTAAGT+AGG | 0.455858 | 2_1:-24753983 | None:intergenic |
GGGGTGTAGATAGAACATTT+TGG | 0.464905 | 2_1:-24754934 | None:intergenic |
CGTTCTCTAATGCAATCTCT+TGG | 0.486499 | 2_1:+24753307 | Msa0202380:CDS |
CCTCCAAGTTGGTTAGGATC+AGG | 0.487097 | 2_1:-24754779 | None:intergenic |
AGTCGTTTGTCCTTCTTGGA+TGG | 0.492248 | 2_1:+24753501 | Msa0202380:intron |
AACAAAGGAGAAATTGAGCT+TGG | 0.495316 | 2_1:+24754260 | Msa0202380:CDS |
GTGTTTGAAACAGGCCTCAT+TGG | 0.497033 | 2_1:-24754815 | None:intergenic |
AATTGAGGTGGAGAAGTTCC+AGG | 0.500124 | 2_1:-24754752 | None:intergenic |
AATTGTGTTGGTGTGATTTG+AGG | 0.500733 | 2_1:-24754866 | None:intergenic |
TCTTCTCACTGCTTCCTGGA+AGG | 0.503286 | 2_1:-24758000 | None:intergenic |
GTTGTAGGGAATAATTGTGT+TGG | 0.512655 | 2_1:-24754878 | None:intergenic |
TTTACAGGAAGCAAGGATCA+AGG | 0.513199 | 2_1:+24754135 | Msa0202380:CDS |
AGAGATGAGTATTCAGGAGT+AGG | 0.522961 | 2_1:-24754710 | None:intergenic |
AGAAGATGAATCAATGGTAG+TGG | 0.525040 | 2_1:+24755934 | Msa0202380:CDS |
TGCGCAGGCGGATATTCAAA+CGG | 0.526338 | 2_1:+24754577 | Msa0202380:intron |
TTCATCAGAAGATGAATCAA+TGG | 0.532346 | 2_1:+24755928 | Msa0202380:CDS |
CTGAGTAATCCTTAGCCTGA+AGG | 0.534544 | 2_1:-24756110 | None:intergenic |
TCACCTGATCCTAACCAACT+TGG | 0.535317 | 2_1:+24754776 | Msa0202380:CDS |
TCATGATCAACATGTCAACT+TGG | 0.538074 | 2_1:+24756027 | Msa0202380:CDS |
GGCAATTGTTGAAGTTGAAG+AGG | 0.545458 | 2_1:-24754845 | None:intergenic |
TGATGAAGTAAATCATTCCC+TGG | 0.552419 | 2_1:-24756082 | None:intergenic |
AATTGTTGCAGCTCTAAGTA+GGG | 0.554645 | 2_1:-24753982 | None:intergenic |
GAATATTTACTCCTCCAAGT+TGG | 0.557510 | 2_1:-24754790 | None:intergenic |
CCTGATCCTAACCAACTTGG+AGG | 0.557669 | 2_1:+24754779 | Msa0202380:CDS |
GTTTATGCAGATAAGTGAAT+GGG | 0.559981 | 2_1:+24757968 | Msa0202380:intron |
TTTGAAACAGGCCTCATTGG+TGG | 0.560996 | 2_1:-24754812 | None:intergenic |
TTAGGATCAGGTGAAAATTG+AGG | 0.561439 | 2_1:-24754767 | None:intergenic |
TTCCATACTGATAACAGCTA+AGG | 0.563069 | 2_1:+24755733 | Msa0202380:CDS |
GAGGTTGATGTTGATGAGAA+GGG | 0.565051 | 2_1:-24754955 | None:intergenic |
TGAGGTTGATGTTGATGAGA+AGG | 0.576774 | 2_1:-24754956 | None:intergenic |
ACACTCCCTAAAGAAGAACT+TGG | 0.577549 | 2_1:-24753552 | None:intergenic |
ACAAATACAAATCATGCACC+AGG | 0.579495 | 2_1:+24756064 | Msa0202380:CDS |
ATGAGATCACTATCAACAGC+AGG | 0.579733 | 2_1:+24754683 | Msa0202380:CDS |
CTTAGAGCATTACTTCCTCA+AGG | 0.580881 | 2_1:+24755223 | Msa0202380:CDS |
GGTTTATGCAGATAAGTGAA+TGG | 0.584114 | 2_1:+24757967 | Msa0202380:intron |
CAGTTCTGACGGCTACAGGA+AGG | 0.586512 | 2_1:-24753276 | None:intergenic |
CTTCAGGCTAAGGATTACTC+AGG | 0.589180 | 2_1:+24756111 | Msa0202380:CDS |
ATGATGAAGTTGATTACTCG+AGG | 0.589833 | 2_1:-24755149 | None:intergenic |
GGATCAGGTGAAAATTGAGG+TGG | 0.596720 | 2_1:-24754764 | None:intergenic |
GACTTGCAAGTGAACGTGAT+GGG | 0.599132 | 2_1:+24755956 | Msa0202380:CDS |
CAAGAGATTGCATTAGAGAA+CGG | 0.600137 | 2_1:-24753306 | None:intergenic |
GTACGTACCTTTGTTCCTTG+AGG | 0.603059 | 2_1:-24755238 | None:intergenic |
AGTTCTGACGGCTACAGGAA+GGG | 0.603804 | 2_1:-24753275 | None:intergenic |
AGGTTGATGTTGATGAGAAG+GGG | 0.605846 | 2_1:-24754954 | None:intergenic |
ACGGATAAATTCAGTTCTGA+CGG | 0.607682 | 2_1:-24753287 | None:intergenic |
ATTGTAGAAACCATCCAAGA+AGG | 0.610273 | 2_1:-24753511 | None:intergenic |
ATTGAAGATGAAGATGATGA+AGG | 0.610501 | 2_1:-24754662 | None:intergenic |
TCAACCTCAGCAAAATTATG+TGG | 0.614391 | 2_1:+24754970 | Msa0202380:CDS |
TGATTCCTAAAAGCTAGTCC+AGG | 0.617478 | 2_1:-24753955 | None:intergenic |
CCTATAACCACATATATGGA+AGG | 0.620515 | 2_1:+24753244 | None:intergenic |
TGATGAAGTTGATTACTCGA+GGG | 0.623889 | 2_1:-24755148 | None:intergenic |
ATTACTTCCTCAAGGAACAA+AGG | 0.632442 | 2_1:+24755231 | Msa0202380:CDS |
TAGGACAACAAGTACTAACC+TGG | 0.632955 | 2_1:-24754050 | None:intergenic |
CAGAAGCTAGTGCATTTGGA+AGG | 0.633413 | 2_1:+24754999 | Msa0202380:CDS |
GCAGATAAGTGAATGGGACG+AGG | 0.636589 | 2_1:+24757974 | Msa0202380:intron |
AATGAGAGATCGAAATCAAG+CGG | 0.637236 | 2_1:+24755120 | Msa0202380:CDS |
TAAAAGCTAGTCCAGGAACA+CGG | 0.640221 | 2_1:-24753948 | None:intergenic |
ATATTCAACATAAATCCACC+TGG | 0.642233 | 2_1:+24754734 | Msa0202380:CDS |
GATGAAGTTGATTACTCGAG+GGG | 0.643129 | 2_1:-24755147 | None:intergenic |
CCAGGAAGCAGTGAGAAGAG+TGG | 0.648622 | 2_1:+24758004 | Msa0202380:CDS |
GGTTGATGTTGATGAGAAGG+GGG | 0.653653 | 2_1:-24754953 | None:intergenic |
GAAGATGAAGATGATGAAGG+TGG | 0.654902 | 2_1:-24754659 | None:intergenic |
CGTTACATGCAAAACTCGAA+CGG | 0.655300 | 2_1:-24755897 | None:intergenic |
AATACAGACACAATTCTACC+AGG | 0.662180 | 2_1:+24754032 | Msa0202380:CDS |
GAGTAAATATTCCACCAATG+AGG | 0.688300 | 2_1:+24754801 | Msa0202380:CDS |
TGAGGTGGAGAAGTTCCAGG+TGG | 0.714377 | 2_1:-24754749 | None:intergenic |
GGACTTGCAAGTGAACGTGA+TGG | 0.716456 | 2_1:+24755955 | Msa0202380:CDS |
CAAATACAAATCATGCACCA+GGG | 0.722090 | 2_1:+24756065 | Msa0202380:CDS |
TGACTTGATACAGTCCCATG+TGG | 0.800087 | 2_1:+24758031 | Msa0202380:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTAAATTTTAATATTTA+TGG | + | chr2_1:24756366-24756385 | Msa0202380:intron | 0.0% |
!!! | AAATATATACTTTGATAATA+TGG | - | chr2_1:24753365-24753384 | None:intergenic | 10.0% |
!!! | AAAGTTTTTTGTAATTAAAT+TGG | + | chr2_1:24753648-24753667 | Msa0202380:intron | 10.0% |
!!! | TATTTTTTTATTTACAACAT+TGG | - | chr2_1:24755494-24755513 | None:intergenic | 10.0% |
!! | AAATAAAAAAATAAAATACG+CGG | + | chr2_1:24755501-24755520 | Msa0202380:intron | 10.0% |
!!! | AAAATTTAATTTATACATGA+AGG | - | chr2_1:24756358-24756377 | None:intergenic | 10.0% |
!!! | ATTTTCAAATTTTTCAAAAA+TGG | + | chr2_1:24756860-24756879 | Msa0202380:intron | 10.0% |
!!! | ACTTTTAATAATAGAATTTA+TGG | - | chr2_1:24757236-24757255 | None:intergenic | 10.0% |
!!! | AGTTTAGAATATAATAATGT+AGG | - | chr2_1:24753408-24753427 | None:intergenic | 15.0% |
!!! | ATTCTTTTTTTTTTTTTTGC+CGG | + | chr2_1:24753696-24753715 | Msa0202380:intron | 15.0% |
!! | TTAGAAAAAGACATTTATTA+AGG | - | chr2_1:24753817-24753836 | None:intergenic | 15.0% |
!! | AATATTGTTTCGTTAAAAAT+TGG | + | chr2_1:24754354-24754373 | Msa0202380:intron | 15.0% |
!! | ATATTGTTTCGTTAAAAATT+GGG | + | chr2_1:24754355-24754374 | Msa0202380:intron | 15.0% |
!! | ATTAATTCGTGAAATAATTA+AGG | + | chr2_1:24756171-24756190 | Msa0202380:intron | 15.0% |
!! | TTAATTCGTGAAATAATTAA+GGG | + | chr2_1:24756172-24756191 | Msa0202380:intron | 15.0% |
!!! | ATTGGTTTATGTATAAAAAT+TGG | - | chr2_1:24757755-24757774 | None:intergenic | 15.0% |
!! | TAGAATATAATAATGTAGGT+AGG | - | chr2_1:24753404-24753423 | None:intergenic | 20.0% |
!!! | TACAACTTGGTTTTTTTTTT+TGG | + | chr2_1:24753475-24753494 | Msa0202380:intron | 20.0% |
!!! | AGTATAGCAATAATTTTCTT+AGG | - | chr2_1:24754072-24754091 | None:intergenic | 20.0% |
!! | TGCTATACTTGTATATATTA+AGG | + | chr2_1:24754083-24754102 | Msa0202380:intron | 20.0% |
!! | ACATATAATGTAAATGTTGT+CGG | + | chr2_1:24754329-24754348 | Msa0202380:intron | 20.0% |
!! | TATTGTTTCGTTAAAAATTG+GGG | + | chr2_1:24754356-24754375 | Msa0202380:intron | 20.0% |
!! | ATGATAAAAGTCCTAATATA+GGG | + | chr2_1:24755029-24755048 | Msa0202380:CDS | 20.0% |
!! | TGATTATAAAACAACATGAT+GGG | - | chr2_1:24755276-24755295 | None:intergenic | 20.0% |
!! | TTGATTATAAAACAACATGA+TGG | - | chr2_1:24755277-24755296 | None:intergenic | 20.0% |
!! | TAATCTATACTCTACAAAAT+AGG | - | chr2_1:24755543-24755562 | None:intergenic | 20.0% |
!!! | ATCTAGAATAATGATATGAT+CGG | - | chr2_1:24756685-24756704 | None:intergenic | 20.0% |
!!! | AACAGTTGTTTAAATTTTGA+CGG | - | chr2_1:24756764-24756783 | None:intergenic | 20.0% |
!!! | TTCAAATTTTTCAAAAATGG+TGG | + | chr2_1:24756863-24756882 | Msa0202380:intron | 20.0% |
!!! | ATTTTCATCGACATAATAAT+GGG | - | chr2_1:24757006-24757025 | None:intergenic | 20.0% |
!!! | AATTTTCATCGACATAATAA+TGG | - | chr2_1:24757007-24757026 | None:intergenic | 20.0% |
!! | AGTATACAACTTCAAATATA+TGG | + | chr2_1:24757036-24757055 | Msa0202380:intron | 20.0% |
!! | ACTTCAAATATATGGTTAAA+AGG | + | chr2_1:24757044-24757063 | Msa0202380:intron | 20.0% |
!!! | TGATAAAGTGAATTCTATTT+TGG | + | chr2_1:24757173-24757192 | Msa0202380:intron | 20.0% |
!!! | TGGATTATTTGTTATATAGT+AGG | - | chr2_1:24757443-24757462 | None:intergenic | 20.0% |
!! | TTTCTCGAAAACAATATATA+TGG | - | chr2_1:24757463-24757482 | None:intergenic | 20.0% |
!!! | AAGCATATCTCATTTTTTTA+AGG | + | chr2_1:24757614-24757633 | Msa0202380:intron | 20.0% |
!!! | ATTTTGTGGTATGTATTATA+AGG | - | chr2_1:24757884-24757903 | None:intergenic | 20.0% |
!!! | AAAGATGGAAACTAATTTTA+TGG | + | chr2_1:24757922-24757941 | Msa0202380:intron | 20.0% |
! | ATATAATAATGTAGGTAGGT+AGG | - | chr2_1:24753400-24753419 | None:intergenic | 25.0% |
! | AATTACCAAGTTCTTCTTTA+GGG | + | chr2_1:24753547-24753566 | Msa0202380:CDS | 25.0% |
!! | AACAGCTTTTTAATCAATAC+AGG | + | chr2_1:24753580-24753599 | Msa0202380:CDS | 25.0% |
!!! | TAGCATGTTTTTGTTTTTAC+AGG | + | chr2_1:24754120-24754139 | Msa0202380:CDS | 25.0% |
!! | ATAGAGAATTTTCAGTTTCT+TGG | - | chr2_1:24754173-24754192 | None:intergenic | 25.0% |
! | AATTTGAACTTTATTCTCTG+AGG | + | chr2_1:24754490-24754509 | Msa0202380:intron | 25.0% |
!! | TTGATTTAACCACATTTTTC+CGG | + | chr2_1:24754553-24754572 | Msa0202380:intron | 25.0% |
! | CATGATAAAAGTCCTAATAT+AGG | + | chr2_1:24755028-24755047 | Msa0202380:CDS | 25.0% |
! | CTAAAATTTGACCCTATATT+AGG | - | chr2_1:24755043-24755062 | None:intergenic | 25.0% |
! | ATGCATAATTATGTACCATA+AGG | + | chr2_1:24755296-24755315 | Msa0202380:intron | 25.0% |
! | TTCAAAAACATTGTTCCTTA+TGG | - | chr2_1:24755314-24755333 | None:intergenic | 25.0% |
! | AGAGACATTAAAAATCTTGA+CGG | - | chr2_1:24755357-24755376 | None:intergenic | 25.0% |
! | AATCGTTTGCAAGAAAAAAT+TGG | - | chr2_1:24755400-24755419 | None:intergenic | 25.0% |
!!! | CTAACATTCATGTTTTTTGT+CGG | - | chr2_1:24755633-24755652 | None:intergenic | 25.0% |
!!! | TGATGTATTGATTCGATTAT+TGG | + | chr2_1:24755994-24756013 | Msa0202380:CDS | 25.0% |
!!! | GTCTCTAAACTTTTAGTTAA+AGG | + | chr2_1:24756719-24756738 | Msa0202380:intron | 25.0% |
!! | AAAGTATTTATGGTTTATCG+TGG | - | chr2_1:24756801-24756820 | None:intergenic | 25.0% |
!!! | ATTGCCTTATTTACATAAGT+CGG | + | chr2_1:24756833-24756852 | Msa0202380:intron | 25.0% |
!!! | ATTACCGACTTATGTAAATA+AGG | - | chr2_1:24756840-24756859 | None:intergenic | 25.0% |
!! | AATTGATAACTCAGACAATT+AGG | + | chr2_1:24756931-24756950 | Msa0202380:intron | 25.0% |
!!! | CAATTAGGTTTTGAAAATAG+TGG | + | chr2_1:24756946-24756965 | Msa0202380:intron | 25.0% |
!! | TTTTCATCGACATAATAATG+GGG | - | chr2_1:24757005-24757024 | None:intergenic | 25.0% |
! | CAAATATATGGTTAAAAGGA+AGG | + | chr2_1:24757048-24757067 | Msa0202380:intron | 25.0% |
!! | TATATGACTTGTGTAATCTT+TGG | - | chr2_1:24757147-24757166 | None:intergenic | 25.0% |
!!! | CATTTTTGAAAGAGTTCAAT+TGG | - | chr2_1:24757773-24757792 | None:intergenic | 25.0% |
TTGATTGTGCTTATACAACT+TGG | + | chr2_1:24753462-24753481 | Msa0202380:intron | 30.0% | |
CAATTACCAAGTTCTTCTTT+AGG | + | chr2_1:24753546-24753565 | Msa0202380:CDS | 30.0% | |
GAAAACAAAAGAGTTTCTGA+TGG | - | chr2_1:24753788-24753807 | None:intergenic | 30.0% | |
ATATTAAGGCTATGTTGCTA+AGG | + | chr2_1:24754097-24754116 | Msa0202380:intron | 30.0% | |
!!! | TTTTGTTTTTACAGGAAGCA+AGG | + | chr2_1:24754128-24754147 | Msa0202380:CDS | 30.0% |
!!! | TTTTCAGACTGTTGTTTTCA+TGG | + | chr2_1:24754232-24754251 | Msa0202380:intron | 30.0% |
!!! | TTTCAGACTGTTGTTTTCAT+GGG | + | chr2_1:24754233-24754252 | Msa0202380:intron | 30.0% |
TTCGTTAAAAATTGGGGAAA+AGG | + | chr2_1:24754362-24754381 | Msa0202380:intron | 30.0% | |
TACCATTTGAACTGTACTTA+CGG | - | chr2_1:24754392-24754411 | None:intergenic | 30.0% | |
! | ATAGTCTTTTTACAACTCCA+AGG | + | chr2_1:24754466-24754485 | Msa0202380:intron | 30.0% |
! | TAGTCTTTTTACAACTCCAA+GGG | + | chr2_1:24754467-24754486 | Msa0202380:intron | 30.0% |
GAATAAAGTTCAAATTCCCT+TGG | - | chr2_1:24754486-24754505 | None:intergenic | 30.0% | |
ATTGAAGATGAAGATGATGA+AGG | - | chr2_1:24754665-24754684 | None:intergenic | 30.0% | |
AATATGAGAGATGAGTATTC+AGG | - | chr2_1:24754719-24754738 | None:intergenic | 30.0% | |
ATATTCAACATAAATCCACC+TGG | + | chr2_1:24754734-24754753 | Msa0202380:CDS | 30.0% | |
CATTCTCAATTTGTGTTGTA+GGG | - | chr2_1:24754895-24754914 | None:intergenic | 30.0% | |
TCATTCTCAATTTGTGTTGT+AGG | - | chr2_1:24754896-24754915 | None:intergenic | 30.0% | |
TCTATACTCTACAAAATAGG+TGG | - | chr2_1:24755540-24755559 | None:intergenic | 30.0% | |
AGAATTGATGTCACAACAAT+TGG | + | chr2_1:24755808-24755827 | Msa0202380:CDS | 30.0% | |
TTCATCAGAAGATGAATCAA+TGG | + | chr2_1:24755928-24755947 | Msa0202380:CDS | 30.0% | |
TACTTCATCAAATAACCTTC+AGG | + | chr2_1:24756095-24756114 | Msa0202380:CDS | 30.0% | |
!! | TTTTTGGTAAGCAAAATGCT+AGG | + | chr2_1:24756470-24756489 | Msa0202380:intron | 30.0% |
TGTAAATAAGGCAATTGCTA+GGG | - | chr2_1:24756828-24756847 | None:intergenic | 30.0% | |
ATGTAAATAAGGCAATTGCT+AGG | - | chr2_1:24756829-24756848 | None:intergenic | 30.0% | |
!!! | TTAGGTTTTGAAAATAGTGG+CGG | + | chr2_1:24756949-24756968 | Msa0202380:intron | 30.0% |
! | GTGCTTGAAATATACTGATT+AGG | + | chr2_1:24757093-24757112 | Msa0202380:intron | 30.0% |
! | AATATACTGATTAGGTCGAT+TGG | + | chr2_1:24757101-24757120 | Msa0202380:intron | 30.0% |
!!! | TATCTATGCTGACTTGTTTT+CGG | - | chr2_1:24757205-24757224 | None:intergenic | 30.0% |
AAGAAAGAGTAGTAAACTTG+TGG | + | chr2_1:24757269-24757288 | Msa0202380:intron | 30.0% | |
TAGTCTGTCAAATGTCAATT+TGG | + | chr2_1:24757384-24757403 | Msa0202380:intron | 30.0% | |
TTGTTATATAGTAGGTCGTT+TGG | - | chr2_1:24757435-24757454 | None:intergenic | 30.0% | |
! | TTGATCAATGATGATGACAA+AGG | - | chr2_1:24757836-24757855 | None:intergenic | 30.0% |
CATACCACAAAATCTTCATT+AGG | + | chr2_1:24757891-24757910 | Msa0202380:intron | 30.0% | |
! | GGAAGAATATTAACCAGTTT+TGG | + | chr2_1:24757943-24757962 | Msa0202380:intron | 30.0% |
!! | AGAATATTAACCAGTTTTGG+TGG | + | chr2_1:24757946-24757965 | Msa0202380:intron | 30.0% |
GTTTATGCAGATAAGTGAAT+GGG | + | chr2_1:24757968-24757987 | Msa0202380:intron | 30.0% | |
!!! | TCATATATTTTGGTCCACAT+GGG | - | chr2_1:24758048-24758067 | None:intergenic | 30.0% |
! | ACGGATAAATTCAGTTCTGA+CGG | - | chr2_1:24753290-24753309 | None:intergenic | 35.0% |
CAAGAGATTGCATTAGAGAA+CGG | - | chr2_1:24753309-24753328 | None:intergenic | 35.0% | |
AGCACAATCAACAACTACTA+TGG | - | chr2_1:24753453-24753472 | None:intergenic | 35.0% | |
ATTGTAGAAACCATCCAAGA+AGG | - | chr2_1:24753514-24753533 | None:intergenic | 35.0% | |
GTAAAGATCTCACGATCTAA+CGG | - | chr2_1:24753875-24753894 | None:intergenic | 35.0% | |
!! | AATTGTTGCAGCTCTAAGTA+GGG | - | chr2_1:24753985-24754004 | None:intergenic | 35.0% |
AATACAGACACAATTCTACC+AGG | + | chr2_1:24754032-24754051 | Msa0202380:CDS | 35.0% | |
!!! | TTCAGACTGTTGTTTTCATG+GGG | + | chr2_1:24754234-24754253 | Msa0202380:intron | 35.0% |
AACAAAGGAGAAATTGAGCT+TGG | + | chr2_1:24754260-24754279 | Msa0202380:CDS | 35.0% | |
ACCATTTGAACTGTACTTAC+GGG | - | chr2_1:24754391-24754410 | None:intergenic | 35.0% | |
CAGTTCAAATGGTAAAAGAC+TGG | + | chr2_1:24754398-24754417 | Msa0202380:intron | 35.0% | |
CTATTAGAAGCGAGAATCAT+GGG | - | chr2_1:24754450-24754469 | None:intergenic | 35.0% | |
ACTATTAGAAGCGAGAATCA+TGG | - | chr2_1:24754451-24754470 | None:intergenic | 35.0% | |
GTCTGTCTTGAAAAATCTTC+AGG | - | chr2_1:24754620-24754639 | None:intergenic | 35.0% | |
TTAGGATCAGGTGAAAATTG+AGG | - | chr2_1:24754770-24754789 | None:intergenic | 35.0% | |
GAATATTTACTCCTCCAAGT+TGG | - | chr2_1:24754793-24754812 | None:intergenic | 35.0% | |
GAGTAAATATTCCACCAATG+AGG | + | chr2_1:24754801-24754820 | Msa0202380:CDS | 35.0% | |
! | GGTAGTAATGTGTTTGAAAC+AGG | - | chr2_1:24754827-24754846 | None:intergenic | 35.0% |
! | AATTGTGTTGGTGTGATTTG+AGG | - | chr2_1:24754869-24754888 | None:intergenic | 35.0% |
GTTGTAGGGAATAATTGTGT+TGG | - | chr2_1:24754881-24754900 | None:intergenic | 35.0% | |
TCAACCTCAGCAAAATTATG+TGG | + | chr2_1:24754970-24754989 | Msa0202380:CDS | 35.0% | |
AATGAGAGATCGAAATCAAG+CGG | + | chr2_1:24755120-24755139 | Msa0202380:CDS | 35.0% | |
! | TGATGAAGTTGATTACTCGA+GGG | - | chr2_1:24755151-24755170 | None:intergenic | 35.0% |
! | ATGATGAAGTTGATTACTCG+AGG | - | chr2_1:24755152-24755171 | None:intergenic | 35.0% |
ATTACTTCCTCAAGGAACAA+AGG | + | chr2_1:24755231-24755250 | Msa0202380:CDS | 35.0% | |
AAACATTATGTTGATCCGAG+TGG | + | chr2_1:24755432-24755451 | Msa0202380:intron | 35.0% | |
TTCCATACTGATAACAGCTA+AGG | + | chr2_1:24755733-24755752 | Msa0202380:CDS | 35.0% | |
AGAAGATGAATCAATGGTAG+TGG | + | chr2_1:24755934-24755953 | Msa0202380:CDS | 35.0% | |
TCATGATCAACATGTCAACT+TGG | + | chr2_1:24756027-24756046 | Msa0202380:CDS | 35.0% | |
ACATGTCAACTTGGTTTCAA+TGG | + | chr2_1:24756036-24756055 | Msa0202380:CDS | 35.0% | |
ACAAATACAAATCATGCACC+AGG | + | chr2_1:24756064-24756083 | Msa0202380:CDS | 35.0% | |
CAAATACAAATCATGCACCA+GGG | + | chr2_1:24756065-24756084 | Msa0202380:CDS | 35.0% | |
TGATGAAGTAAATCATTCCC+TGG | - | chr2_1:24756085-24756104 | None:intergenic | 35.0% | |
ATCAAATAACCTTCAGGCTA+AGG | + | chr2_1:24756101-24756120 | Msa0202380:CDS | 35.0% | |
!!! | AACGGTTTTTAGAATGACAC+TGG | - | chr2_1:24756514-24756533 | None:intergenic | 35.0% |
!!! | GTCGTTGTTAGAGTTTTGAA+CGG | - | chr2_1:24756532-24756551 | None:intergenic | 35.0% |
! | TGACTTGTGTAATCTTTGGA+TGG | - | chr2_1:24757143-24757162 | None:intergenic | 35.0% |
CTACTCTTTCTTAACGATTG+AGG | - | chr2_1:24757261-24757280 | None:intergenic | 35.0% | |
TTATATAGTAGGTCGTTTGG+TGG | - | chr2_1:24757432-24757451 | None:intergenic | 35.0% | |
! | CTCACCTAATGAAGATTTTG+TGG | - | chr2_1:24757898-24757917 | None:intergenic | 35.0% |
CACAAAATCTTCATTAGGTG+AGG | + | chr2_1:24757896-24757915 | Msa0202380:intron | 35.0% | |
CATTAGGTGAGGAAAAAAGA+TGG | + | chr2_1:24757907-24757926 | Msa0202380:intron | 35.0% | |
GGTTTATGCAGATAAGTGAA+TGG | + | chr2_1:24757967-24757986 | Msa0202380:intron | 35.0% | |
CGTTCTCTAATGCAATCTCT+TGG | + | chr2_1:24753307-24753326 | Msa0202380:CDS | 40.0% | |
GATGCTCTCACATTTGTCTT+TGG | + | chr2_1:24753329-24753348 | Msa0202380:CDS | 40.0% | |
GAATAGTCGTTTGTCCTTCT+TGG | + | chr2_1:24753497-24753516 | Msa0202380:intron | 40.0% | |
ACACTCCCTAAAGAAGAACT+TGG | - | chr2_1:24753555-24753574 | None:intergenic | 40.0% | |
AAAGTGATCTCTCGTGAATC+CGG | - | chr2_1:24753718-24753737 | None:intergenic | 40.0% | |
TAAAAGCTAGTCCAGGAACA+CGG | - | chr2_1:24753951-24753970 | None:intergenic | 40.0% | |
TGATTCCTAAAAGCTAGTCC+AGG | - | chr2_1:24753958-24753977 | None:intergenic | 40.0% | |
!! | CAATTGTTGCAGCTCTAAGT+AGG | - | chr2_1:24753986-24754005 | None:intergenic | 40.0% |
CTACTTAGAGCTGCAACAAT+TGG | + | chr2_1:24753984-24754003 | Msa0202380:CDS | 40.0% | |
TAGGACAACAAGTACTAACC+TGG | - | chr2_1:24754053-24754072 | None:intergenic | 40.0% | |
TTTACAGGAAGCAAGGATCA+AGG | + | chr2_1:24754135-24754154 | Msa0202380:CDS | 40.0% | |
TCCCGTAAGTACAGTTCAAA+TGG | + | chr2_1:24754387-24754406 | Msa0202380:intron | 40.0% | |
GAAGATGAAGATGATGAAGG+TGG | - | chr2_1:24754662-24754681 | None:intergenic | 40.0% | |
ATGAGATCACTATCAACAGC+AGG | + | chr2_1:24754683-24754702 | Msa0202380:CDS | 40.0% | |
AGAGATGAGTATTCAGGAGT+AGG | - | chr2_1:24754713-24754732 | None:intergenic | 40.0% | |
!! | TTTACTCCTCCAAGTTGGTT+AGG | - | chr2_1:24754788-24754807 | None:intergenic | 40.0% |
GGCAATTGTTGAAGTTGAAG+AGG | - | chr2_1:24754848-24754867 | None:intergenic | 40.0% | |
! | GGGGTGTAGATAGAACATTT+TGG | - | chr2_1:24754937-24754956 | None:intergenic | 40.0% |
!! | AGGTTGATGTTGATGAGAAG+GGG | - | chr2_1:24754957-24754976 | None:intergenic | 40.0% |
!! | GAGGTTGATGTTGATGAGAA+GGG | - | chr2_1:24754958-24754977 | None:intergenic | 40.0% |
!! | TGAGGTTGATGTTGATGAGA+AGG | - | chr2_1:24754959-24754978 | None:intergenic | 40.0% |
! | TGTGCCACATAATTTTGCTG+AGG | - | chr2_1:24754977-24754996 | None:intergenic | 40.0% |
! | GATGAAGTTGATTACTCGAG+GGG | - | chr2_1:24755150-24755169 | None:intergenic | 40.0% |
! | CTTAGAGCATTACTTCCTCA+AGG | + | chr2_1:24755223-24755242 | Msa0202380:CDS | 40.0% |
GATCGCTTAAGTAAGATCTC+AGG | + | chr2_1:24755466-24755485 | Msa0202380:intron | 40.0% | |
CTCCTTAGCTGTTATCAGTA+TGG | - | chr2_1:24755738-24755757 | None:intergenic | 40.0% | |
GGAGACATTGAGATCTTTGA+TGG | + | chr2_1:24755754-24755773 | Msa0202380:CDS | 40.0% | |
CGTTACATGCAAAACTCGAA+CGG | - | chr2_1:24755900-24755919 | None:intergenic | 40.0% | |
!! | CGTTCGAGTTTTGCATGTAA+CGG | + | chr2_1:24755898-24755917 | Msa0202380:CDS | 40.0% |
!! | GTTCGAGTTTTGCATGTAAC+GGG | + | chr2_1:24755899-24755918 | Msa0202380:CDS | 40.0% |
!! | TTCGAGTTTTGCATGTAACG+GGG | + | chr2_1:24755900-24755919 | Msa0202380:CDS | 40.0% |
ATCCTTTCTCACACTTGAGA+TGG | + | chr2_1:24756587-24756606 | Msa0202380:intron | 40.0% | |
!! | CTAGGGTGGGAAAGTATTTA+TGG | - | chr2_1:24756811-24756830 | None:intergenic | 40.0% |
AATAAGGCAATTGCTAGGGT+GGG | - | chr2_1:24756824-24756843 | None:intergenic | 40.0% | |
AAATAAGGCAATTGCTAGGG+TGG | - | chr2_1:24756825-24756844 | None:intergenic | 40.0% | |
GGCTGCATAAACTTTATCAC+AGG | + | chr2_1:24756970-24756989 | Msa0202380:intron | 40.0% | |
! | CGACATAATAATGGGGTTCT+AGG | - | chr2_1:24756998-24757017 | None:intergenic | 40.0% |
AGCATGTCTCATTGCAATGT+CGG | + | chr2_1:24757643-24757662 | Msa0202380:intron | 40.0% | |
TCTGCATAAACCACCAAAAC+TGG | - | chr2_1:24757959-24757978 | None:intergenic | 40.0% | |
! | AATTCAGTTCTGACGGCTAC+AGG | - | chr2_1:24753283-24753302 | None:intergenic | 45.0% |
AGTCGTTTGTCCTTCTTGGA+TGG | + | chr2_1:24753501-24753520 | Msa0202380:intron | 45.0% | |
AGATTCGCTCTTCAACCTTG+TGG | + | chr2_1:24753744-24753763 | Msa0202380:intron | 45.0% | |
CTCTTCAACCTTGTGGTTCT+CGG | + | chr2_1:24753751-24753770 | Msa0202380:intron | 45.0% | |
!!! | GTTTTGTTTAGCCGTGTTCC+TGG | + | chr2_1:24753937-24753956 | Msa0202380:intron | 45.0% |
!!! | GTGTTCCTGGACTAGCTTTT+AGG | + | chr2_1:24753950-24753969 | Msa0202380:CDS | 45.0% |
! | GTTTTCATGGGGTGCAACAA+AGG | + | chr2_1:24754245-24754264 | Msa0202380:CDS | 45.0% |
AATTGAGGTGGAGAAGTTCC+AGG | - | chr2_1:24754755-24754774 | None:intergenic | 45.0% | |
GGATCAGGTGAAAATTGAGG+TGG | - | chr2_1:24754767-24754786 | None:intergenic | 45.0% | |
TCACCTGATCCTAACCAACT+TGG | + | chr2_1:24754776-24754795 | Msa0202380:CDS | 45.0% | |
! | TTTGAAACAGGCCTCATTGG+TGG | - | chr2_1:24754815-24754834 | None:intergenic | 45.0% |
! | GTGTTTGAAACAGGCCTCAT+TGG | - | chr2_1:24754818-24754837 | None:intergenic | 45.0% |
! | GGTTGATGTTGATGAGAAGG+GGG | - | chr2_1:24754956-24754975 | None:intergenic | 45.0% |
CATCCAGAAGCTAGTGCATT+TGG | + | chr2_1:24754995-24755014 | Msa0202380:CDS | 45.0% | |
! | CTTCCAAATGCACTAGCTTC+TGG | - | chr2_1:24755001-24755020 | None:intergenic | 45.0% |
CAGAAGCTAGTGCATTTGGA+AGG | + | chr2_1:24754999-24755018 | Msa0202380:CDS | 45.0% | |
GTACGTACCTTTGTTCCTTG+AGG | - | chr2_1:24755241-24755260 | None:intergenic | 45.0% | |
! | GATCTGAGTCTAGTTCCACT+CGG | - | chr2_1:24755450-24755469 | None:intergenic | 45.0% |
GACTTGCAAGTGAACGTGAT+GGG | + | chr2_1:24755956-24755975 | Msa0202380:CDS | 45.0% | |
CTGAGTAATCCTTAGCCTGA+AGG | - | chr2_1:24756113-24756132 | None:intergenic | 45.0% | |
CTTCAGGCTAAGGATTACTC+AGG | + | chr2_1:24756111-24756130 | Msa0202380:CDS | 45.0% | |
CACCATCTCAAGTGTGAGAA+AGG | - | chr2_1:24756592-24756611 | None:intergenic | 45.0% | |
!!! | CTATGCTGACTTGTTTTCGG+TGG | - | chr2_1:24757202-24757221 | None:intergenic | 45.0% |
TGACTTGATACAGTCCCATG+TGG | + | chr2_1:24758031-24758050 | Msa0202380:CDS | 45.0% | |
!! | AAACTATAAAAATTATAAAT+GGG | - | chr2_1:24756446-24756465 | None:intergenic | 5.0% |
!! | AAAACTATAAAAATTATAAA+TGG | - | chr2_1:24756447-24756466 | None:intergenic | 5.0% |
!!! | TTTTTATAGTTTTTTTTTTT+TGG | + | chr2_1:24756454-24756473 | Msa0202380:intron | 5.0% |
!!! | ATTTATATTAATTTTTTTAG+AGG | + | chr2_1:24757523-24757542 | Msa0202380:intron | 5.0% |
! | AGTTCTGACGGCTACAGGAA+GGG | - | chr2_1:24753278-24753297 | None:intergenic | 50.0% |
TGCGCAGGCGGATATTCAAA+CGG | + | chr2_1:24754577-24754596 | Msa0202380:intron | 50.0% | |
!! | CCTCCAAGTTGGTTAGGATC+AGG | - | chr2_1:24754782-24754801 | None:intergenic | 50.0% |
CCTGATCCTAACCAACTTGG+AGG | + | chr2_1:24754779-24754798 | Msa0202380:CDS | 50.0% | |
GGACTTGCAAGTGAACGTGA+TGG | + | chr2_1:24755955-24755974 | Msa0202380:CDS | 50.0% | |
GCAGATAAGTGAATGGGACG+AGG | + | chr2_1:24757974-24757993 | Msa0202380:intron | 50.0% | |
TCTTCTCACTGCTTCCTGGA+AGG | - | chr2_1:24758003-24758022 | None:intergenic | 50.0% | |
! | CAGTTCTGACGGCTACAGGA+AGG | - | chr2_1:24753279-24753298 | None:intergenic | 55.0% |
GTCTCGAACCGAGAACCACA+AGG | - | chr2_1:24753762-24753781 | None:intergenic | 55.0% | |
TGAGGTGGAGAAGTTCCAGG+TGG | - | chr2_1:24754752-24754771 | None:intergenic | 55.0% | |
CCACTCTTCTCACTGCTTCC+TGG | - | chr2_1:24758007-24758026 | None:intergenic | 55.0% | |
CCAGGAAGCAGTGAGAAGAG+TGG | + | chr2_1:24758004-24758023 | Msa0202380:CDS | 55.0% | |
CCTGCGCAGCCGGAAAAATG+TGG | - | chr2_1:24754565-24754584 | None:intergenic | 60.0% | |
! | CCACATTTTTCCGGCTGCGC+AGG | + | chr2_1:24754562-24754581 | Msa0202380:intron | 60.0% |
! | CATTTTTCCGGCTGCGCAGG+CGG | + | chr2_1:24754565-24754584 | Msa0202380:intron | 60.0% |
TGAATATCCGCCTGCGCAGC+CGG | - | chr2_1:24754575-24754594 | None:intergenic | 60.0% | |
ATGGGACGAGGAAGCCTTCC+AGG | + | chr2_1:24757986-24758005 | Msa0202380:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 24753259 | 24758067 | 24753259 | ID=Msa0202380;Name=Msa0202380 |
chr2_1 | mRNA | 24753259 | 24758067 | 24753259 | ID=Msa0202380-mRNA-1;Parent=Msa0202380;Name=Msa0202380-mRNA-1;_AED=0.02;_eAED=0.03;_QI=0|0.14|0|1|0.85|0.75|8|0|540 |
chr2_1 | exon | 24753259 | 24753374 | 24753259 | ID=Msa0202380-mRNA-1:exon:9448;Parent=Msa0202380-mRNA-1 |
chr2_1 | exon | 24753503 | 24753628 | 24753503 | ID=Msa0202380-mRNA-1:exon:9449;Parent=Msa0202380-mRNA-1 |
chr2_1 | exon | 24753948 | 24754057 | 24753948 | ID=Msa0202380-mRNA-1:exon:9450;Parent=Msa0202380-mRNA-1 |
chr2_1 | exon | 24754119 | 24754156 | 24754119 | ID=Msa0202380-mRNA-1:exon:9451;Parent=Msa0202380-mRNA-1 |
chr2_1 | exon | 24754239 | 24754301 | 24754239 | ID=Msa0202380-mRNA-1:exon:9452;Parent=Msa0202380-mRNA-1 |
chr2_1 | exon | 24754584 | 24755252 | 24754584 | ID=Msa0202380-mRNA-1:exon:9453;Parent=Msa0202380-mRNA-1 |
chr2_1 | exon | 24755722 | 24756132 | 24755722 | ID=Msa0202380-mRNA-1:exon:9454;Parent=Msa0202380-mRNA-1 |
chr2_1 | exon | 24757978 | 24758067 | 24757978 | ID=Msa0202380-mRNA-1:exon:9455;Parent=Msa0202380-mRNA-1 |
chr2_1 | CDS | 24753259 | 24753374 | 24753259 | ID=Msa0202380-mRNA-1:cds;Parent=Msa0202380-mRNA-1 |
chr2_1 | CDS | 24753503 | 24753628 | 24753503 | ID=Msa0202380-mRNA-1:cds;Parent=Msa0202380-mRNA-1 |
chr2_1 | CDS | 24753948 | 24754057 | 24753948 | ID=Msa0202380-mRNA-1:cds;Parent=Msa0202380-mRNA-1 |
chr2_1 | CDS | 24754119 | 24754156 | 24754119 | ID=Msa0202380-mRNA-1:cds;Parent=Msa0202380-mRNA-1 |
chr2_1 | CDS | 24754239 | 24754301 | 24754239 | ID=Msa0202380-mRNA-1:cds;Parent=Msa0202380-mRNA-1 |
chr2_1 | CDS | 24754584 | 24755252 | 24754584 | ID=Msa0202380-mRNA-1:cds;Parent=Msa0202380-mRNA-1 |
chr2_1 | CDS | 24755722 | 24756132 | 24755722 | ID=Msa0202380-mRNA-1:cds;Parent=Msa0202380-mRNA-1 |
chr2_1 | CDS | 24757978 | 24758067 | 24757978 | ID=Msa0202380-mRNA-1:cds;Parent=Msa0202380-mRNA-1 |
Gene Sequence |
Protein sequence |