Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245400 | XP_024631492.1 | 93.309 | 538 | 25 | 3 | 1 | 538 | 1 | 527 | 0.0 | 940 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245400 | sp|Q9LTS4|BH041_ARATH | 34.884 | 516 | 242 | 15 | 44 | 530 | 14 | 464 | 2.35e-58 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245400 | G7IIK8 | 93.123 | 538 | 21 | 3 | 1 | 538 | 1 | 522 | 0.0 | 937 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0245400 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000820 | Msa0245400 | 0.812994 | 3.203485e-51 | -8.615850e-47 |
| Msa0104810 | Msa0245400 | 0.832043 | 1.183655e-55 | -8.615850e-47 |
| Msa0143640 | Msa0245400 | 0.809592 | 1.753627e-50 | -8.615850e-47 |
| Msa0162680 | Msa0245400 | 0.818351 | 2.050660e-52 | -8.615850e-47 |
| Msa0186240 | Msa0245400 | 0.811238 | 7.735876e-51 | -8.615850e-47 |
| Msa0202380 | Msa0245400 | 0.899793 | 1.393047e-77 | -8.615850e-47 |
| Msa0242720 | Msa0245400 | 0.801435 | 9.015498e-49 | -8.615850e-47 |
| Msa0245400 | Msa0264520 | 0.806374 | 8.487453e-50 | -8.615850e-47 |
| Msa0245400 | Msa0302510 | 0.800314 | 1.527681e-48 | -8.615850e-47 |
| Msa0245400 | Msa0322200 | 0.821076 | 4.893465e-53 | -8.615850e-47 |
| Msa0245400 | Msa0332360 | 0.817996 | 2.468371e-52 | -8.615850e-47 |
| Msa0245400 | Msa0345980 | 0.821398 | 4.123382e-53 | -8.615850e-47 |
| Msa0245400 | Msa0393100 | 0.854507 | 1.175233e-61 | -8.615850e-47 |
| Msa0245400 | Msa0402800 | 0.836473 | 9.170279e-57 | -8.615850e-47 |
| Msa0245400 | Msa0434400 | 0.816440 | 5.525175e-52 | -8.615850e-47 |
| Msa0245400 | Msa0443450 | 0.817052 | 4.027145e-52 | -8.615850e-47 |
| Msa0245400 | Msa0449620 | 0.820501 | 6.635459e-53 | -8.615850e-47 |
| Msa0245400 | Msa0478080 | 0.816045 | 6.771075e-52 | -8.615850e-47 |
| Msa0245400 | Msa0480530 | 0.809812 | 1.572679e-50 | -8.615850e-47 |
| Msa0245400 | Msa0480540 | 0.812744 | 3.633617e-51 | -8.615850e-47 |
| Msa0245400 | Msa0480550 | 0.827417 | 1.582788e-54 | -8.615850e-47 |
| Msa0245400 | Msa0488580 | 0.853239 | 2.724856e-61 | -8.615850e-47 |
| Msa0245400 | Msa0497860 | 0.839297 | 1.723540e-57 | -8.615850e-47 |
| Msa0245400 | Msa0510870 | 0.802134 | 6.480655e-49 | -8.615850e-47 |
| Msa0245400 | Msa0522140 | 0.801855 | 7.393916e-49 | -8.615850e-47 |
| Msa0245400 | Msa0522170 | 0.805391 | 1.365296e-49 | -8.615850e-47 |
| Msa0245400 | Msa0557250 | 0.806685 | 7.295380e-50 | -8.615850e-47 |
| Msa0245400 | Msa0561110 | 0.801649 | 8.151243e-49 | -8.615850e-47 |
| Msa0245400 | Msa0580840 | 0.815326 | 9.792205e-52 | -8.615850e-47 |
| Msa0245400 | Msa0604570 | 0.810340 | 1.210111e-50 | -8.615850e-47 |
| Msa0245400 | Msa0615200 | 0.830609 | 2.667228e-55 | -8.615850e-47 |
| Msa0245400 | Msa0652600 | 0.813900 | 2.025013e-51 | -8.615850e-47 |
| Msa0245400 | Msa0698280 | 0.817119 | 3.889862e-52 | -8.615850e-47 |
| Msa0245400 | Msa0744540 | 0.812415 | 4.288330e-51 | -8.615850e-47 |
| Msa0245400 | Msa0744550 | 0.813562 | 2.403830e-51 | -8.615850e-47 |
| Msa0245400 | Msa0744560 | 0.825864 | 3.715377e-54 | -8.615850e-47 |
| Msa0245400 | Msa0781210 | 0.801456 | 8.927470e-49 | -8.615850e-47 |
| Msa0245400 | Msa0826370 | 0.827357 | 1.635908e-54 | -8.615850e-47 |
| Msa0245400 | Msa0826380 | 0.839707 | 1.348689e-57 | -8.615850e-47 |
| Msa0245400 | Msa0826450 | 0.823426 | 1.394165e-53 | -8.615850e-47 |
| Msa0245400 | Msa0865810 | 0.838836 | 2.269321e-57 | -8.615850e-47 |
| Msa0245400 | Msa0865820 | 0.813728 | 2.209576e-51 | -8.615850e-47 |
| Msa0245400 | Msa0873940 | 0.806494 | 8.003790e-50 | -8.615850e-47 |
| Msa0245400 | Msa1025750 | 0.815490 | 9.001751e-52 | -8.615850e-47 |
| Msa0245400 | Msa1030210 | 0.819138 | 1.359154e-52 | -8.615850e-47 |
| Msa0245400 | Msa1041250 | 0.816761 | 4.680828e-52 | -8.615850e-47 |
| Msa0245400 | Msa1069250 | 0.831118 | 2.000925e-55 | -8.615850e-47 |
| Msa0245400 | Msa1075090 | 0.804706 | 1.898931e-49 | -8.615850e-47 |
| Msa0245400 | Msa1077970 | 0.801160 | 1.026374e-48 | -8.615850e-47 |
| Msa0245400 | Msa1089600 | 0.808244 | 3.406936e-50 | -8.615850e-47 |
| Msa0245400 | Msa1095590 | 0.811476 | 6.870722e-51 | -8.615850e-47 |
| Msa0245400 | Msa1110900 | 0.809530 | 1.807738e-50 | -8.615850e-47 |
| Msa0245400 | Msa1120580 | 0.804791 | 1.823140e-49 | -8.615850e-47 |
| Msa0245400 | Msa1174280 | 0.822193 | 2.699927e-53 | -8.615850e-47 |
| Msa0245400 | Msa1211610 | 0.807844 | 4.144634e-50 | -8.615850e-47 |
| Msa0245400 | Msa1299480 | 0.807386 | 5.185677e-50 | -8.615850e-47 |
| Msa0245400 | Msa1366480 | 0.807091 | 5.986168e-50 | -8.615850e-47 |
| Msa0245400 | Msa1401110 | 0.821687 | 3.536830e-53 | -8.615850e-47 |
| Msa0245400 | Msa1422230 | 0.830019 | 3.717717e-55 | -8.615850e-47 |
| Msa0245400 | Msa1427000 | 0.810895 | 9.179824e-51 | -8.615850e-47 |
| Msa0245400 | Msa1459920 | 0.820550 | 6.464572e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245400 | MtrunA17_Chr2g0299471 | 93.231 | 458 | 20 | 3 | 81 | 538 | 6 | 452 | 0.0 | 783 |
| Msa0245400 | MtrunA17_Chr5g0400661 | 27.759 | 299 | 170 | 11 | 256 | 526 | 49 | 329 | 7.76e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245400 | AT5G56960.2 | 38.182 | 550 | 270 | 17 | 12 | 530 | 13 | 523 | 3.73e-83 | 268 |
| Msa0245400 | AT5G56960.1 | 34.884 | 516 | 242 | 15 | 44 | 530 | 14 | 464 | 2.39e-59 | 204 |
Find 94 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGTATTGATTCGATTAT+TGG | 0.081677 | 2_2:+25107400 | Msa0245400:CDS |
| CTAAAATTTGACCCTATATT+AGG | 0.183433 | 2_2:-25106446 | None:intergenic |
| ATCATGTGAGTCATATATTT+TGG | 0.239208 | 2_2:-25109460 | None:intergenic |
| GATGCTCTCACATTTGTCTT+TGG | 0.245611 | 2_2:+25104670 | Msa0245400:CDS |
| GAATAGTCGTTTGTCCTTCT+TGG | 0.247039 | 2_2:+25104839 | Msa0245400:intron |
| AAATATATACTTTGATAATA+TGG | 0.249981 | 2_2:-25104703 | None:intergenic |
| CAATTACCAAGTTCTTCTTT+AGG | 0.263208 | 2_2:+25104888 | Msa0245400:CDS |
| AATTACCAAGTTCTTCTTTA+GGG | 0.266258 | 2_2:+25104889 | Msa0245400:CDS |
| CCACTCTTCTCACTGCTTCC+TGG | 0.304864 | 2_2:-25109409 | None:intergenic |
| CTTCCAAATGCACTAGCTTC+TGG | 0.330949 | 2_2:-25106404 | None:intergenic |
| TACTTCATCAAATAACCTTC+AGG | 0.345353 | 2_2:+25107501 | Msa0245400:CDS |
| CATGATAAAAGTCCTAATAT+AGG | 0.347025 | 2_2:+25106434 | Msa0245400:CDS |
| CTCCTTAGCTGTTATCAGTA+TGG | 0.357487 | 2_2:-25107141 | None:intergenic |
| AATATGAGAGATGAGTATTC+AGG | 0.359714 | 2_2:-25106122 | None:intergenic |
| CATCCAGAAGCTAGTGCATT+TGG | 0.365951 | 2_2:+25106401 | Msa0245400:CDS |
| ATGGGACGAGGAAGCCTTCC+AGG | 0.369330 | 2_2:+25109391 | Msa0245400:CDS |
| ATGATAAAAGTCCTAATATA+GGG | 0.380695 | 2_2:+25106435 | Msa0245400:CDS |
| GGAGACATTGAGATCTTTGA+TGG | 0.383429 | 2_2:+25107160 | Msa0245400:CDS |
| AGAATTGATGTCACAACAAT+TGG | 0.385231 | 2_2:+25107214 | Msa0245400:CDS |
| GGTAGTAGTGTGTTTGAAAC+AGG | 0.397618 | 2_2:-25106230 | None:intergenic |
| TCATTCTCAGTGTGTGTTGT+AGG | 0.401735 | 2_2:-25106299 | None:intergenic |
| ACATGTCAACTTGGTTTCAA+TGG | 0.402871 | 2_2:+25107442 | Msa0245400:CDS |
| CTACTTAGAGCTGCAACAAT+TGG | 0.412913 | 2_2:+25105326 | Msa0245400:CDS |
| ATCAAATAACCTTCAGGCTA+AGG | 0.429025 | 2_2:+25107507 | Msa0245400:CDS |
| AATTCAGTTCTGACGGCTAC+AGG | 0.433952 | 2_2:-25104621 | None:intergenic |
| GAATATTTATTCCTCCAAGT+TGG | 0.443689 | 2_2:-25106196 | None:intergenic |
| GGGGTGTAGATAGAACATTT+TGG | 0.464905 | 2_2:-25106340 | None:intergenic |
| AATATTTATTCCTCCAAGTT+GGG | 0.465125 | 2_2:-25106195 | None:intergenic |
| GGTAATTGTTGAAGTTGAAA+AGG | 0.465384 | 2_2:-25106251 | None:intergenic |
| TCACCTGATCCTACCCAACT+TGG | 0.482330 | 2_2:+25106182 | Msa0245400:CDS |
| CAATTGTTGCAGCTCTAAGT+AGG | 0.485660 | 2_2:-25105325 | None:intergenic |
| CGTTCTCTAATGCAATCTCT+TGG | 0.486499 | 2_2:+25104648 | Msa0245400:CDS |
| AATTGTGTTGGTGTGATTTG+AGG | 0.486696 | 2_2:-25106272 | None:intergenic |
| CCTCCAAGTTGGGTAGGATC+AGG | 0.489579 | 2_2:-25106185 | None:intergenic |
| AGTCGTTTGTCCTTCTTGGA+TGG | 0.492248 | 2_2:+25104843 | Msa0245400:intron |
| GTTGTAGGGAATAATTGTGT+TGG | 0.494305 | 2_2:-25106284 | None:intergenic |
| AACAAAGGAGAAATTGAGCT+TGG | 0.495316 | 2_2:+25105632 | Msa0245400:CDS |
| CATTCTCAGTGTGTGTTGTA+GGG | 0.498942 | 2_2:-25106298 | None:intergenic |
| AATTGAGGTGGAGAAGTTCC+AGG | 0.500124 | 2_2:-25106158 | None:intergenic |
| TCTTCTCACTGCTTCCTGGA+AGG | 0.503286 | 2_2:-25109405 | None:intergenic |
| GTGTTTGAAACAGGTCTCAT+TGG | 0.519603 | 2_2:-25106221 | None:intergenic |
| AGAGATGAGTATTCAGGAGT+AGG | 0.522961 | 2_2:-25106116 | None:intergenic |
| AGAAGATGAATCAATGGTAG+TGG | 0.525040 | 2_2:+25107340 | Msa0245400:CDS |
| TTCATCAGAAGATGAATCAA+TGG | 0.532346 | 2_2:+25107334 | Msa0245400:CDS |
| CTGAGTAATCCTTAGCCTGA+AGG | 0.534544 | 2_2:-25107516 | None:intergenic |
| TCATGATCAACATGTCAACT+TGG | 0.538074 | 2_2:+25107433 | Msa0245400:CDS |
| TTTATTCCTCCAAGTTGGGT+AGG | 0.547865 | 2_2:-25106191 | None:intergenic |
| TGCACAGGCGGATATTCAAA+CGG | 0.552403 | 2_2:+25105983 | Msa0245400:intron |
| TGATGAAGTAAATCATTCCC+TGG | 0.552419 | 2_2:-25107488 | None:intergenic |
| CCTGATCCTACCCAACTTGG+AGG | 0.553608 | 2_2:+25106185 | Msa0245400:CDS |
| GTTTATGCAGATAAGTGAAT+GGG | 0.559981 | 2_2:+25109373 | Msa0245400:intron |
| TTCCATACTGATAACAGCTA+AGG | 0.563069 | 2_2:+25107139 | Msa0245400:CDS |
| GAGGTTGATGTTGATGAGAA+GGG | 0.565051 | 2_2:-25106361 | None:intergenic |
| AATTGTTGCAGCTCTAAGTA+GGG | 0.570276 | 2_2:-25105324 | None:intergenic |
| TTTGAAACAGGTCTCATTGG+TGG | 0.575275 | 2_2:-25106218 | None:intergenic |
| TGAGGTTGATGTTGATGAGA+AGG | 0.576774 | 2_2:-25106362 | None:intergenic |
| ACACTCCCTAAAGAAGAACT+TGG | 0.577549 | 2_2:-25104894 | None:intergenic |
| ACAAATACAAATCATGCACC+AGG | 0.579495 | 2_2:+25107470 | Msa0245400:CDS |
| ATGAGATCACTATCAACAGC+AGG | 0.579733 | 2_2:+25106089 | Msa0245400:CDS |
| CTTAGAGCATTACTTCCTCA+AGG | 0.580881 | 2_2:+25106629 | Msa0245400:CDS |
| GGTTTATGCAGATAAGTGAA+TGG | 0.584114 | 2_2:+25109372 | Msa0245400:intron |
| CAGTTCTGACGGCTACAGGA+AGG | 0.586512 | 2_2:-25104617 | None:intergenic |
| CTTCAGGCTAAGGATTACTC+AGG | 0.589180 | 2_2:+25107517 | Msa0245400:CDS |
| ATGATGAAGTTGATTACTCG+AGG | 0.589833 | 2_2:-25106555 | None:intergenic |
| GACTTGCAAGTGAACGTGAT+GGG | 0.599132 | 2_2:+25107362 | Msa0245400:CDS |
| CAAGAGATTGCATTAGAGAA+CGG | 0.600137 | 2_2:-25104647 | None:intergenic |
| GTACGTACCTTTGTTCCTTG+AGG | 0.603059 | 2_2:-25106644 | None:intergenic |
| AGTTCTGACGGCTACAGGAA+GGG | 0.603804 | 2_2:-25104616 | None:intergenic |
| AGGTTGATGTTGATGAGAAG+GGG | 0.605846 | 2_2:-25106360 | None:intergenic |
| ACGGATAAATTCAGTTCTGA+CGG | 0.607682 | 2_2:-25104628 | None:intergenic |
| ATTGTAGAAACCATCCAAGA+AGG | 0.610273 | 2_2:-25104853 | None:intergenic |
| ATTGAAGATGAAGATGATGA+AGG | 0.610501 | 2_2:-25106068 | None:intergenic |
| TCAACCTCAGCAAAATTATG+TGG | 0.614391 | 2_2:+25106376 | Msa0245400:CDS |
| GTAGGATCAGGTGAAAATTG+AGG | 0.615518 | 2_2:-25106173 | None:intergenic |
| TGATTCCTAAAAGCTAGTCC+AGG | 0.617478 | 2_2:-25105297 | None:intergenic |
| TGATGAAGTTGATTACTCGA+GGG | 0.623889 | 2_2:-25106554 | None:intergenic |
| ATTACTTCCTCAAGGAACAA+AGG | 0.632442 | 2_2:+25106637 | Msa0245400:CDS |
| TAGGACAACAAGTACTAACC+TGG | 0.632955 | 2_2:-25105392 | None:intergenic |
| CAGAAGCTAGTGCATTTGGA+AGG | 0.633413 | 2_2:+25106405 | Msa0245400:CDS |
| GCAGATAAGTGAATGGGACG+AGG | 0.636589 | 2_2:+25109379 | Msa0245400:intron |
| GGATCAGGTGAAAATTGAGG+TGG | 0.639584 | 2_2:-25106170 | None:intergenic |
| TAAAAGCTAGTCCAGGAACA+CGG | 0.640221 | 2_2:-25105290 | None:intergenic |
| ATATTCAACATAAATCCACC+TGG | 0.642233 | 2_2:+25106140 | Msa0245400:CDS |
| GATGAAGTTGATTACTCGAG+GGG | 0.643129 | 2_2:-25106553 | None:intergenic |
| CCAGGAAGCAGTGAGAAGAG+TGG | 0.648622 | 2_2:+25109409 | Msa0245400:CDS |
| GGTTGATGTTGATGAGAAGG+GGG | 0.653653 | 2_2:-25106359 | None:intergenic |
| GAAGATGAAGATGATGAAGG+TGG | 0.654902 | 2_2:-25106065 | None:intergenic |
| CGTTACATGCAAAACTCGAA+CGG | 0.655300 | 2_2:-25107303 | None:intergenic |
| GTATATACCACATATATGGA+AGG | 0.655851 | 2_2:+25104585 | None:intergenic |
| AATACAGACACAATTCTACC+AGG | 0.662180 | 2_2:+25105374 | Msa0245400:CDS |
| TGACTTGATACAGTCCCAAG+TGG | 0.713861 | 2_2:+25109436 | Msa0245400:CDS |
| TGAGGTGGAGAAGTTCCAGG+TGG | 0.714377 | 2_2:-25106155 | None:intergenic |
| GGACTTGCAAGTGAACGTGA+TGG | 0.716456 | 2_2:+25107361 | Msa0245400:CDS |
| CAAATACAAATCATGCACCA+GGG | 0.722090 | 2_2:+25107471 | Msa0245400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAAATTTTAATATTTA+TGG | + | chr2_2:25107768-25107787 | Msa0245400:intron | 0.0% |
| !!! | TAATTTATATTAATTTTTTT+AGG | + | chr2_2:25108923-25108942 | Msa0245400:intron | 0.0% |
| !!! | AATTTATATTAATTTTTTTA+GGG | + | chr2_2:25108924-25108943 | Msa0245400:intron | 0.0% |
| !!! | AAATATATACTTTGATAATA+TGG | - | chr2_2:25104706-25104725 | None:intergenic | 10.0% |
| !! | AAAGTTTATTGTAATTAAAT+TGG | + | chr2_2:25104990-25105009 | Msa0245400:intron | 10.0% |
| !!! | AATGTTTTTTTTTTTTTTTG+AGG | + | chr2_2:25105713-25105732 | Msa0245400:intron | 10.0% |
| !!! | GTAAATATTTTGTTAAAAAT+TGG | + | chr2_2:25105759-25105778 | Msa0245400:intron | 10.0% |
| !!! | AAATATTTTGTTAAAAATTG+GGG | + | chr2_2:25105761-25105780 | Msa0245400:intron | 10.0% |
| !!! | TATTTTTTTATTTACATCAT+TGG | - | chr2_2:25106900-25106919 | None:intergenic | 10.0% |
| !! | AAATAAAAAAATAAAATACG+CGG | + | chr2_2:25106907-25106926 | Msa0245400:intron | 10.0% |
| !!! | AAAATTTAATTTATACATGA+AGG | - | chr2_2:25107760-25107779 | None:intergenic | 10.0% |
| !!! | ACTTTTTATAATAGAATTTA+TGG | - | chr2_2:25108640-25108659 | None:intergenic | 10.0% |
| !!! | AGTTTAGAATATAATAATGT+AGG | - | chr2_2:25104749-25104768 | None:intergenic | 15.0% |
| !!! | ATTCTTTTTTTTTTTTTTGC+CGG | + | chr2_2:25105038-25105057 | Msa0245400:intron | 15.0% |
| !!! | CATATAGTAATATAAGATTT+TGG | - | chr2_2:25105570-25105589 | None:intergenic | 15.0% |
| !! | ATATATAATGTAAATGTTGT+CGG | + | chr2_2:25105737-25105756 | Msa0245400:intron | 15.0% |
| !! | ATTAATTCGTGAAATAATTA+AGG | + | chr2_2:25107573-25107592 | Msa0245400:intron | 15.0% |
| !! | TTAATTCGTGAAATAATTAA+GGG | + | chr2_2:25107574-25107593 | Msa0245400:intron | 15.0% |
| !!! | ATTGGTTTATGTATAAAAAT+TGG | - | chr2_2:25109160-25109179 | None:intergenic | 15.0% |
| !! | TAGAATATAATAATGTAGGT+AGG | - | chr2_2:25104745-25104764 | None:intergenic | 20.0% |
| !!! | ACAACTTGGTTTTTTTTTTT+TGG | + | chr2_2:25104817-25104836 | Msa0245400:intron | 20.0% |
| !! | TTAGAAAAAGACATTTCTTA+AGG | - | chr2_2:25105159-25105178 | None:intergenic | 20.0% |
| !!! | AGTATAGCAATAATTTTCTT+AGG | - | chr2_2:25105414-25105433 | None:intergenic | 20.0% |
| !! | TGCTATACTTGTATATATTA+AGG | + | chr2_2:25105425-25105444 | Msa0245400:intron | 20.0% |
| !!! | TTGATTTAACCACATTTTTT+CGG | + | chr2_2:25105959-25105978 | Msa0245400:intron | 20.0% |
| !! | ATGATAAAAGTCCTAATATA+GGG | + | chr2_2:25106435-25106454 | Msa0245400:CDS | 20.0% |
| !! | TGATTATAAAACAACATGAT+GGG | - | chr2_2:25106682-25106701 | None:intergenic | 20.0% |
| !! | TTGATTATAAAACAACATGA+TGG | - | chr2_2:25106683-25106702 | None:intergenic | 20.0% |
| !! | TAATCTATACTCTACAAAAT+AGG | - | chr2_2:25106949-25106968 | None:intergenic | 20.0% |
| !! | TAATTCGTGAAATAATTAAG+GGG | + | chr2_2:25107575-25107594 | Msa0245400:intron | 20.0% |
| !!! | TGATCTTATATCTAGAATAA+TGG | - | chr2_2:25108097-25108116 | None:intergenic | 20.0% |
| !!! | AACAGTTGTTTAAATTTTGA+CGG | - | chr2_2:25108167-25108186 | None:intergenic | 20.0% |
| !!! | ATTTTCAAACTTTTCAAAAG+AGG | + | chr2_2:25108266-25108285 | Msa0245400:intron | 20.0% |
| !!! | TAATTAGGTTTTGAAAATAG+TGG | + | chr2_2:25108353-25108372 | Msa0245400:intron | 20.0% |
| !!! | ATTTTCATCGACATAATAAT+GGG | - | chr2_2:25108413-25108432 | None:intergenic | 20.0% |
| !!! | AATTTTCATCGACATAATAA+TGG | - | chr2_2:25108414-25108433 | None:intergenic | 20.0% |
| !! | GTATACAACTTCAAATATAT+TGG | + | chr2_2:25108444-25108463 | Msa0245400:intron | 20.0% |
| !!! | CTTCAAATATATTGGTTAAA+AGG | + | chr2_2:25108452-25108471 | Msa0245400:intron | 20.0% |
| !!! | AAATATATTGGTTAAAAGGA+AGG | + | chr2_2:25108456-25108475 | Msa0245400:intron | 20.0% |
| !!! | TGAAAAAGTGAATTCTATTT+TGG | + | chr2_2:25108577-25108596 | Msa0245400:intron | 20.0% |
| !!! | TGGATTATTTGTTATATAGT+AGG | - | chr2_2:25108845-25108864 | None:intergenic | 20.0% |
| !! | TTTCTCGAAAACAATATATA+TGG | - | chr2_2:25108865-25108884 | None:intergenic | 20.0% |
| !!! | ATTTTGTGGTATGTATTATA+GGG | - | chr2_2:25109289-25109308 | None:intergenic | 20.0% |
| !!! | AAAGATGGAAACTAATTTTA+TGG | + | chr2_2:25109327-25109346 | Msa0245400:intron | 20.0% |
| ! | ATATAATAATGTAGGTAGGT+AGG | - | chr2_2:25104741-25104760 | None:intergenic | 25.0% |
| ! | AATTACCAAGTTCTTCTTTA+GGG | + | chr2_2:25104889-25104908 | Msa0245400:CDS | 25.0% |
| !! | AACAGCTTTTTAATCAATAC+AGG | + | chr2_2:25104922-25104941 | Msa0245400:CDS | 25.0% |
| !!! | TAGCATGTTTTTGTTTTTAC+AGG | + | chr2_2:25105462-25105481 | Msa0245400:intron | 25.0% |
| !! | ATAGAGAATTTTCAGTTTCT+TGG | - | chr2_2:25105515-25105534 | None:intergenic | 25.0% |
| ! | TTTGTTAAAAATTGGGGAAA+AGG | + | chr2_2:25105767-25105786 | Msa0245400:intron | 25.0% |
| ! | AATTTGAACTTTATTCTCTG+AGG | + | chr2_2:25105896-25105915 | Msa0245400:intron | 25.0% |
| ! | AATATTTATTCCTCCAAGTT+GGG | - | chr2_2:25106198-25106217 | None:intergenic | 25.0% |
| ! | CATGATAAAAGTCCTAATAT+AGG | + | chr2_2:25106434-25106453 | Msa0245400:CDS | 25.0% |
| ! | CTAAAATTTGACCCTATATT+AGG | - | chr2_2:25106449-25106468 | None:intergenic | 25.0% |
| ! | ATGCATAATTATGTACCATA+AGG | + | chr2_2:25106702-25106721 | Msa0245400:intron | 25.0% |
| ! | TTCAAAAACATTGTTCCTTA+TGG | - | chr2_2:25106720-25106739 | None:intergenic | 25.0% |
| ! | AGAGACATTAAAAATCTTGA+CGG | - | chr2_2:25106763-25106782 | None:intergenic | 25.0% |
| ! | AATCGTTTGCAAGAAAAAAT+TGG | - | chr2_2:25106806-25106825 | None:intergenic | 25.0% |
| !!! | CTAACATTCATGTTTTTTGT+CGG | - | chr2_2:25107039-25107058 | None:intergenic | 25.0% |
| !!! | TGATGTATTGATTCGATTAT+TGG | + | chr2_2:25107400-25107419 | Msa0245400:CDS | 25.0% |
| !! | ATCTAGAATAATGGTATGAT+CGG | - | chr2_2:25108088-25108107 | None:intergenic | 25.0% |
| !!! | GTCTCTAAACTTTTAGTTAA+AGG | + | chr2_2:25108122-25108141 | Msa0245400:intron | 25.0% |
| !! | GTATTTTATATGGTATATCG+TGG | - | chr2_2:25108204-25108223 | None:intergenic | 25.0% |
| ! | ATTACCTACTTATGTAAATG+AGG | - | chr2_2:25108246-25108265 | None:intergenic | 25.0% |
| ! | GATAATACACTCAGATAATT+AGG | + | chr2_2:25108338-25108357 | Msa0245400:intron | 25.0% |
| !! | TTTTCATCGACATAATAATG+GGG | - | chr2_2:25108412-25108431 | None:intergenic | 25.0% |
| !! | TATATGACTTGTGTAATCTT+TGG | - | chr2_2:25108551-25108570 | None:intergenic | 25.0% |
| !!! | CATTTTTGAAAGAGTTCAAT+TGG | - | chr2_2:25109178-25109197 | None:intergenic | 25.0% |
| !! | GATTTTGTGGTATGTATTAT+AGG | - | chr2_2:25109290-25109309 | None:intergenic | 25.0% |
| TTGATTGTGCTTATACAACT+TGG | + | chr2_2:25104803-25104822 | Msa0245400:intron | 30.0% | |
| CAATTACCAAGTTCTTCTTT+AGG | + | chr2_2:25104888-25104907 | Msa0245400:CDS | 30.0% | |
| GAAAACAAAAGAGTTTCTGA+TGG | - | chr2_2:25105130-25105149 | None:intergenic | 30.0% | |
| ATATTAAGGCTATGTTGCTA+AGG | + | chr2_2:25105439-25105458 | Msa0245400:intron | 30.0% | |
| !!! | TTTTGTTTTTACAGGAAGCA+AGG | + | chr2_2:25105470-25105489 | Msa0245400:intron | 30.0% |
| CAACAGTCTGAAAAGAAAAA+TGG | - | chr2_2:25105598-25105617 | None:intergenic | 30.0% | |
| !!! | TTTTCAGACTGTTGTTTTCA+TGG | + | chr2_2:25105604-25105623 | Msa0245400:intron | 30.0% |
| !!! | TTTCAGACTGTTGTTTTCAT+GGG | + | chr2_2:25105605-25105624 | Msa0245400:intron | 30.0% |
| TACCATTTGAACTGTACTTA+CGG | - | chr2_2:25105797-25105816 | None:intergenic | 30.0% | |
| TATTAGAAGCGAGAAATCAT+GGG | - | chr2_2:25105855-25105874 | None:intergenic | 30.0% | |
| ! | ATAGTCTTTTTACAACTCCA+AGG | + | chr2_2:25105872-25105891 | Msa0245400:intron | 30.0% |
| ! | TAGTCTTTTTACAACTCCAA+GGG | + | chr2_2:25105873-25105892 | Msa0245400:intron | 30.0% |
| GAATAAAGTTCAAATTCCCT+TGG | - | chr2_2:25105892-25105911 | None:intergenic | 30.0% | |
| ATTGAAGATGAAGATGATGA+AGG | - | chr2_2:25106071-25106090 | None:intergenic | 30.0% | |
| AATATGAGAGATGAGTATTC+AGG | - | chr2_2:25106125-25106144 | None:intergenic | 30.0% | |
| ATATTCAACATAAATCCACC+TGG | + | chr2_2:25106140-25106159 | Msa0245400:CDS | 30.0% | |
| GAATATTTATTCCTCCAAGT+TGG | - | chr2_2:25106199-25106218 | None:intergenic | 30.0% | |
| GGTAATTGTTGAAGTTGAAA+AGG | - | chr2_2:25106254-25106273 | None:intergenic | 30.0% | |
| TCTATACTCTACAAAATAGG+TGG | - | chr2_2:25106946-25106965 | None:intergenic | 30.0% | |
| AGAATTGATGTCACAACAAT+TGG | + | chr2_2:25107214-25107233 | Msa0245400:CDS | 30.0% | |
| TTCATCAGAAGATGAATCAA+TGG | + | chr2_2:25107334-25107353 | Msa0245400:CDS | 30.0% | |
| TACTTCATCAAATAACCTTC+AGG | + | chr2_2:25107501-25107520 | Msa0245400:CDS | 30.0% | |
| !! | TTTTTGGTAAGCAAAATGCT+AGG | + | chr2_2:25107874-25107893 | Msa0245400:intron | 30.0% |
| !!! | GGGTGGAAAAGTATTTTATA+TGG | - | chr2_2:25108214-25108233 | None:intergenic | 30.0% |
| ATTGCCTCATTTACATAAGT+AGG | + | chr2_2:25108239-25108258 | Msa0245400:intron | 30.0% | |
| ! | TTCAAACTTTTCAAAAGAGG+AGG | + | chr2_2:25108269-25108288 | Msa0245400:intron | 30.0% |
| !!! | TTAGGTTTTGAAAATAGTGG+CGG | + | chr2_2:25108356-25108375 | Msa0245400:intron | 30.0% |
| AAGAAAGAGTAGTAAACTTG+TGG | + | chr2_2:25108673-25108692 | Msa0245400:intron | 30.0% | |
| TAGTCTGTCAAATGTCAATT+TGG | + | chr2_2:25108786-25108805 | Msa0245400:intron | 30.0% | |
| TTGTTATATAGTAGGTCGTT+TGG | - | chr2_2:25108837-25108856 | None:intergenic | 30.0% | |
| ! | TTGATCAATGATGATGACAA+AGG | - | chr2_2:25109241-25109260 | None:intergenic | 30.0% |
| CATACCACAAAATCTTCATT+AGG | + | chr2_2:25109296-25109315 | Msa0245400:intron | 30.0% | |
| ! | GGAAGAATATTAACCAGTTT+TGG | + | chr2_2:25109348-25109367 | Msa0245400:intron | 30.0% |
| !! | AGAATATTAACCAGTTTTGG+TGG | + | chr2_2:25109351-25109370 | Msa0245400:intron | 30.0% |
| GTTTATGCAGATAAGTGAAT+GGG | + | chr2_2:25109373-25109392 | Msa0245400:intron | 30.0% | |
| !!! | TCATATATTTTGGTCCACTT+GGG | - | chr2_2:25109453-25109472 | None:intergenic | 30.0% |
| ! | ACGGATAAATTCAGTTCTGA+CGG | - | chr2_2:25104631-25104650 | None:intergenic | 35.0% |
| CAAGAGATTGCATTAGAGAA+CGG | - | chr2_2:25104650-25104669 | None:intergenic | 35.0% | |
| AGCACAATCAACAACTACTA+TGG | - | chr2_2:25104794-25104813 | None:intergenic | 35.0% | |
| ATTGTAGAAACCATCCAAGA+AGG | - | chr2_2:25104856-25104875 | None:intergenic | 35.0% | |
| !! | AATTGTTGCAGCTCTAAGTA+GGG | - | chr2_2:25105327-25105346 | None:intergenic | 35.0% |
| AATACAGACACAATTCTACC+AGG | + | chr2_2:25105374-25105393 | Msa0245400:CDS | 35.0% | |
| !!! | TTCAGACTGTTGTTTTCATG+GGG | + | chr2_2:25105606-25105625 | Msa0245400:intron | 35.0% |
| AACAAAGGAGAAATTGAGCT+TGG | + | chr2_2:25105632-25105651 | Msa0245400:CDS | 35.0% | |
| ACCATTTGAACTGTACTTAC+GGG | - | chr2_2:25105796-25105815 | None:intergenic | 35.0% | |
| CAGTTCAAATGGTAAAAGAC+TGG | + | chr2_2:25105803-25105822 | Msa0245400:intron | 35.0% | |
| CTATTAGAAGCGAGAAATCA+TGG | - | chr2_2:25105856-25105875 | None:intergenic | 35.0% | |
| GTCTGTCTTGAAAAATCTTC+AGG | - | chr2_2:25106026-25106045 | None:intergenic | 35.0% | |
| ! | AATTGTGTTGGTGTGATTTG+AGG | - | chr2_2:25106275-25106294 | None:intergenic | 35.0% |
| GTTGTAGGGAATAATTGTGT+TGG | - | chr2_2:25106287-25106306 | None:intergenic | 35.0% | |
| TCAACCTCAGCAAAATTATG+TGG | + | chr2_2:25106376-25106395 | Msa0245400:CDS | 35.0% | |
| ! | TGATGAAGTTGATTACTCGA+GGG | - | chr2_2:25106557-25106576 | None:intergenic | 35.0% |
| ! | ATGATGAAGTTGATTACTCG+AGG | - | chr2_2:25106558-25106577 | None:intergenic | 35.0% |
| ATTACTTCCTCAAGGAACAA+AGG | + | chr2_2:25106637-25106656 | Msa0245400:CDS | 35.0% | |
| AAACATTATGTTGATCCGAG+TGG | + | chr2_2:25106838-25106857 | Msa0245400:intron | 35.0% | |
| TTCCATACTGATAACAGCTA+AGG | + | chr2_2:25107139-25107158 | Msa0245400:CDS | 35.0% | |
| AGAAGATGAATCAATGGTAG+TGG | + | chr2_2:25107340-25107359 | Msa0245400:CDS | 35.0% | |
| TCATGATCAACATGTCAACT+TGG | + | chr2_2:25107433-25107452 | Msa0245400:CDS | 35.0% | |
| ACATGTCAACTTGGTTTCAA+TGG | + | chr2_2:25107442-25107461 | Msa0245400:CDS | 35.0% | |
| ACAAATACAAATCATGCACC+AGG | + | chr2_2:25107470-25107489 | Msa0245400:CDS | 35.0% | |
| CAAATACAAATCATGCACCA+GGG | + | chr2_2:25107471-25107490 | Msa0245400:CDS | 35.0% | |
| TGATGAAGTAAATCATTCCC+TGG | - | chr2_2:25107491-25107510 | None:intergenic | 35.0% | |
| ATCAAATAACCTTCAGGCTA+AGG | + | chr2_2:25107507-25107526 | Msa0245400:CDS | 35.0% | |
| !!! | AACGGTTTTTAGAATGACAC+TGG | - | chr2_2:25107918-25107937 | None:intergenic | 35.0% |
| !!! | GTCGTTGTTAGAGTTTTGAA+CGG | - | chr2_2:25107936-25107955 | None:intergenic | 35.0% |
| TGTAAATGAGGCAATTGCTA+GGG | - | chr2_2:25108234-25108253 | None:intergenic | 35.0% | |
| ATGTAAATGAGGCAATTGCT+AGG | - | chr2_2:25108235-25108254 | None:intergenic | 35.0% | |
| !! | GAGATACTCATTAGGTTGAT+TGG | + | chr2_2:25108505-25108524 | Msa0245400:intron | 35.0% |
| !!! | GAATTCTATTTTGGCAGCTA+CGG | + | chr2_2:25108586-25108605 | Msa0245400:intron | 35.0% |
| TTATATAGTAGGTCGTTTGG+TGG | - | chr2_2:25108834-25108853 | None:intergenic | 35.0% | |
| ! | CTCACCTAATGAAGATTTTG+TGG | - | chr2_2:25109303-25109322 | None:intergenic | 35.0% |
| CACAAAATCTTCATTAGGTG+AGG | + | chr2_2:25109301-25109320 | Msa0245400:intron | 35.0% | |
| CATTAGGTGAGGAAAAAAGA+TGG | + | chr2_2:25109312-25109331 | Msa0245400:intron | 35.0% | |
| GGTTTATGCAGATAAGTGAA+TGG | + | chr2_2:25109372-25109391 | Msa0245400:intron | 35.0% | |
| CGTTCTCTAATGCAATCTCT+TGG | + | chr2_2:25104648-25104667 | Msa0245400:CDS | 40.0% | |
| GATGCTCTCACATTTGTCTT+TGG | + | chr2_2:25104670-25104689 | Msa0245400:CDS | 40.0% | |
| GAATAGTCGTTTGTCCTTCT+TGG | + | chr2_2:25104839-25104858 | Msa0245400:intron | 40.0% | |
| ACACTCCCTAAAGAAGAACT+TGG | - | chr2_2:25104897-25104916 | None:intergenic | 40.0% | |
| AAAGTGATCTCTCGTGAATC+CGG | - | chr2_2:25105060-25105079 | None:intergenic | 40.0% | |
| TAAAAGCTAGTCCAGGAACA+CGG | - | chr2_2:25105293-25105312 | None:intergenic | 40.0% | |
| TGATTCCTAAAAGCTAGTCC+AGG | - | chr2_2:25105300-25105319 | None:intergenic | 40.0% | |
| !! | CAATTGTTGCAGCTCTAAGT+AGG | - | chr2_2:25105328-25105347 | None:intergenic | 40.0% |
| CTACTTAGAGCTGCAACAAT+TGG | + | chr2_2:25105326-25105345 | Msa0245400:CDS | 40.0% | |
| TAGGACAACAAGTACTAACC+TGG | - | chr2_2:25105395-25105414 | None:intergenic | 40.0% | |
| TTTACAGGAAGCAAGGATCA+AGG | + | chr2_2:25105477-25105496 | Msa0245400:intron | 40.0% | |
| TCCCGTAAGTACAGTTCAAA+TGG | + | chr2_2:25105792-25105811 | Msa0245400:intron | 40.0% | |
| GAAGATGAAGATGATGAAGG+TGG | - | chr2_2:25106068-25106087 | None:intergenic | 40.0% | |
| ATGAGATCACTATCAACAGC+AGG | + | chr2_2:25106089-25106108 | Msa0245400:CDS | 40.0% | |
| AGAGATGAGTATTCAGGAGT+AGG | - | chr2_2:25106119-25106138 | None:intergenic | 40.0% | |
| GTAGGATCAGGTGAAAATTG+AGG | - | chr2_2:25106176-25106195 | None:intergenic | 40.0% | |
| ! | TTTATTCCTCCAAGTTGGGT+AGG | - | chr2_2:25106194-25106213 | None:intergenic | 40.0% |
| ! | TTTGAAACAGGTCTCATTGG+TGG | - | chr2_2:25106221-25106240 | None:intergenic | 40.0% |
| ! | GTGTTTGAAACAGGTCTCAT+TGG | - | chr2_2:25106224-25106243 | None:intergenic | 40.0% |
| ! | GGTAGTAGTGTGTTTGAAAC+AGG | - | chr2_2:25106233-25106252 | None:intergenic | 40.0% |
| CATTCTCAGTGTGTGTTGTA+GGG | - | chr2_2:25106301-25106320 | None:intergenic | 40.0% | |
| TCATTCTCAGTGTGTGTTGT+AGG | - | chr2_2:25106302-25106321 | None:intergenic | 40.0% | |
| ! | GGGGTGTAGATAGAACATTT+TGG | - | chr2_2:25106343-25106362 | None:intergenic | 40.0% |
| !! | AGGTTGATGTTGATGAGAAG+GGG | - | chr2_2:25106363-25106382 | None:intergenic | 40.0% |
| !! | GAGGTTGATGTTGATGAGAA+GGG | - | chr2_2:25106364-25106383 | None:intergenic | 40.0% |
| !! | TGAGGTTGATGTTGATGAGA+AGG | - | chr2_2:25106365-25106384 | None:intergenic | 40.0% |
| ! | TGTGCCACATAATTTTGCTG+AGG | - | chr2_2:25106383-25106402 | None:intergenic | 40.0% |
| ! | GATGAAGTTGATTACTCGAG+GGG | - | chr2_2:25106556-25106575 | None:intergenic | 40.0% |
| ! | CTTAGAGCATTACTTCCTCA+AGG | + | chr2_2:25106629-25106648 | Msa0245400:CDS | 40.0% |
| CTCCTTAGCTGTTATCAGTA+TGG | - | chr2_2:25107144-25107163 | None:intergenic | 40.0% | |
| GGAGACATTGAGATCTTTGA+TGG | + | chr2_2:25107160-25107179 | Msa0245400:CDS | 40.0% | |
| CGTTACATGCAAAACTCGAA+CGG | - | chr2_2:25107306-25107325 | None:intergenic | 40.0% | |
| !! | CGTTCGAGTTTTGCATGTAA+CGG | + | chr2_2:25107304-25107323 | Msa0245400:CDS | 40.0% |
| !! | GTTCGAGTTTTGCATGTAAC+GGG | + | chr2_2:25107305-25107324 | Msa0245400:CDS | 40.0% |
| !! | TTCGAGTTTTGCATGTAACG+GGG | + | chr2_2:25107306-25107325 | Msa0245400:CDS | 40.0% |
| ATCCTTTCTCACACTTGAGA+TGG | + | chr2_2:25107991-25108010 | Msa0245400:intron | 40.0% | |
| GGCTGCATAAACTTTATCAC+AGG | + | chr2_2:25108377-25108396 | Msa0245400:intron | 40.0% | |
| ! | CGACATAATAATGGGGTTCT+AGG | - | chr2_2:25108405-25108424 | None:intergenic | 40.0% |
| GTGTGCTTGAGATACTCATT+AGG | + | chr2_2:25108497-25108516 | Msa0245400:intron | 40.0% | |
| CTACTCTTTCTTAACGATCG+AGG | - | chr2_2:25108665-25108684 | None:intergenic | 40.0% | |
| AGCATGTCTCATTGCAATGT+CGG | + | chr2_2:25109048-25109067 | Msa0245400:intron | 40.0% | |
| TCTGCATAAACCACCAAAAC+TGG | - | chr2_2:25109364-25109383 | None:intergenic | 40.0% | |
| ! | AATTCAGTTCTGACGGCTAC+AGG | - | chr2_2:25104624-25104643 | None:intergenic | 45.0% |
| AGTCGTTTGTCCTTCTTGGA+TGG | + | chr2_2:25104843-25104862 | Msa0245400:intron | 45.0% | |
| AGATTCGCTCTTCAACCTTG+TGG | + | chr2_2:25105086-25105105 | Msa0245400:intron | 45.0% | |
| CTCTTCAACCTTGTGGTTCT+CGG | + | chr2_2:25105093-25105112 | Msa0245400:intron | 45.0% | |
| !!! | GTTTTGTTTAGCCGTGTTCC+TGG | + | chr2_2:25105279-25105298 | Msa0245400:intron | 45.0% |
| !!! | GTGTTCCTGGACTAGCTTTT+AGG | + | chr2_2:25105292-25105311 | Msa0245400:CDS | 45.0% |
| ! | GTTTTCATGGGGTGCAACAA+AGG | + | chr2_2:25105617-25105636 | Msa0245400:CDS | 45.0% |
| TGCACAGGCGGATATTCAAA+CGG | + | chr2_2:25105983-25106002 | Msa0245400:intron | 45.0% | |
| AATTGAGGTGGAGAAGTTCC+AGG | - | chr2_2:25106161-25106180 | None:intergenic | 45.0% | |
| GGATCAGGTGAAAATTGAGG+TGG | - | chr2_2:25106173-25106192 | None:intergenic | 45.0% | |
| ! | GGTTGATGTTGATGAGAAGG+GGG | - | chr2_2:25106362-25106381 | None:intergenic | 45.0% |
| CATCCAGAAGCTAGTGCATT+TGG | + | chr2_2:25106401-25106420 | Msa0245400:CDS | 45.0% | |
| ! | CTTCCAAATGCACTAGCTTC+TGG | - | chr2_2:25106407-25106426 | None:intergenic | 45.0% |
| CAGAAGCTAGTGCATTTGGA+AGG | + | chr2_2:25106405-25106424 | Msa0245400:CDS | 45.0% | |
| GTACGTACCTTTGTTCCTTG+AGG | - | chr2_2:25106647-25106666 | None:intergenic | 45.0% | |
| ! | GATCTGAGTCTAGTTCCACT+CGG | - | chr2_2:25106856-25106875 | None:intergenic | 45.0% |
| GATCGCTCAAGTAAGATCTC+AGG | + | chr2_2:25106872-25106891 | Msa0245400:intron | 45.0% | |
| GACTTGCAAGTGAACGTGAT+GGG | + | chr2_2:25107362-25107381 | Msa0245400:CDS | 45.0% | |
| CTGAGTAATCCTTAGCCTGA+AGG | - | chr2_2:25107519-25107538 | None:intergenic | 45.0% | |
| CTTCAGGCTAAGGATTACTC+AGG | + | chr2_2:25107517-25107536 | Msa0245400:CDS | 45.0% | |
| CACCATCTCAAGTGTGAGAA+AGG | - | chr2_2:25107996-25108015 | None:intergenic | 45.0% | |
| AAATGAGGCAATTGCTAGGG+TGG | - | chr2_2:25108231-25108250 | None:intergenic | 45.0% | |
| TGACTTGATACAGTCCCAAG+TGG | + | chr2_2:25109436-25109455 | Msa0245400:CDS | 45.0% | |
| !!! | TAAATATTTTGTTAAAAATT+GGG | + | chr2_2:25105760-25105779 | Msa0245400:intron | 5.0% |
| !! | AAACTATAAAAATTATAAAT+GGG | - | chr2_2:25107848-25107867 | None:intergenic | 5.0% |
| !! | AAAACTATAAAAATTATAAA+TGG | - | chr2_2:25107849-25107868 | None:intergenic | 5.0% |
| !!! | TTTATAGTTTTTTTTTTTTT+TGG | + | chr2_2:25107858-25107877 | Msa0245400:intron | 5.0% |
| !!! | ATTTATATTAATTTTTTTAG+GGG | + | chr2_2:25108925-25108944 | Msa0245400:intron | 5.0% |
| ! | AGTTCTGACGGCTACAGGAA+GGG | - | chr2_2:25104619-25104638 | None:intergenic | 50.0% |
| GTCTCAAACCGAGAACCACA+AGG | - | chr2_2:25105104-25105123 | None:intergenic | 50.0% | |
| CCTGTGCAGCCGAAAAAATG+TGG | - | chr2_2:25105971-25105990 | None:intergenic | 50.0% | |
| !!! | CCACATTTTTTCGGCTGCAC+AGG | + | chr2_2:25105968-25105987 | Msa0245400:intron | 50.0% |
| !!! | CATTTTTTCGGCTGCACAGG+CGG | + | chr2_2:25105971-25105990 | Msa0245400:intron | 50.0% |
| TCACCTGATCCTACCCAACT+TGG | + | chr2_2:25106182-25106201 | Msa0245400:CDS | 50.0% | |
| GGACTTGCAAGTGAACGTGA+TGG | + | chr2_2:25107361-25107380 | Msa0245400:CDS | 50.0% | |
| GCAGATAAGTGAATGGGACG+AGG | + | chr2_2:25109379-25109398 | Msa0245400:intron | 50.0% | |
| TCTTCTCACTGCTTCCTGGA+AGG | - | chr2_2:25109408-25109427 | None:intergenic | 50.0% | |
| ! | CAGTTCTGACGGCTACAGGA+AGG | - | chr2_2:25104620-25104639 | None:intergenic | 55.0% |
| TGAGGTGGAGAAGTTCCAGG+TGG | - | chr2_2:25106158-25106177 | None:intergenic | 55.0% | |
| ! | CCTCCAAGTTGGGTAGGATC+AGG | - | chr2_2:25106188-25106207 | None:intergenic | 55.0% |
| CCTGATCCTACCCAACTTGG+AGG | + | chr2_2:25106185-25106204 | Msa0245400:CDS | 55.0% | |
| CCACTCTTCTCACTGCTTCC+TGG | - | chr2_2:25109412-25109431 | None:intergenic | 55.0% | |
| CCAGGAAGCAGTGAGAAGAG+TGG | + | chr2_2:25109409-25109428 | Msa0245400:CDS | 55.0% | |
| ATGGGACGAGGAAGCCTTCC+AGG | + | chr2_2:25109391-25109410 | Msa0245400:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 25104600 | 25109472 | 25104600 | ID=Msa0245400;Name=Msa0245400 |
| chr2_2 | mRNA | 25104600 | 25109472 | 25104600 | ID=Msa0245400-mRNA-1;Parent=Msa0245400;Name=Msa0245400-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.16|0|1|0.83|0.85|7|0|539 |
| chr2_2 | exon | 25104600 | 25104715 | 25104600 | ID=Msa0245400-mRNA-1:exon:9451;Parent=Msa0245400-mRNA-1 |
| chr2_2 | exon | 25104845 | 25104970 | 25104845 | ID=Msa0245400-mRNA-1:exon:9452;Parent=Msa0245400-mRNA-1 |
| chr2_2 | exon | 25105290 | 25105434 | 25105290 | ID=Msa0245400-mRNA-1:exon:9453;Parent=Msa0245400-mRNA-1 |
| chr2_2 | exon | 25105611 | 25105673 | 25105611 | ID=Msa0245400-mRNA-1:exon:9454;Parent=Msa0245400-mRNA-1 |
| chr2_2 | exon | 25105990 | 25106658 | 25105990 | ID=Msa0245400-mRNA-1:exon:9455;Parent=Msa0245400-mRNA-1 |
| chr2_2 | exon | 25107128 | 25107538 | 25107128 | ID=Msa0245400-mRNA-1:exon:9456;Parent=Msa0245400-mRNA-1 |
| chr2_2 | exon | 25109383 | 25109472 | 25109383 | ID=Msa0245400-mRNA-1:exon:9457;Parent=Msa0245400-mRNA-1 |
| chr2_2 | CDS | 25104600 | 25104715 | 25104600 | ID=Msa0245400-mRNA-1:cds;Parent=Msa0245400-mRNA-1 |
| chr2_2 | CDS | 25104845 | 25104970 | 25104845 | ID=Msa0245400-mRNA-1:cds;Parent=Msa0245400-mRNA-1 |
| chr2_2 | CDS | 25105290 | 25105434 | 25105290 | ID=Msa0245400-mRNA-1:cds;Parent=Msa0245400-mRNA-1 |
| chr2_2 | CDS | 25105611 | 25105673 | 25105611 | ID=Msa0245400-mRNA-1:cds;Parent=Msa0245400-mRNA-1 |
| chr2_2 | CDS | 25105990 | 25106658 | 25105990 | ID=Msa0245400-mRNA-1:cds;Parent=Msa0245400-mRNA-1 |
| chr2_2 | CDS | 25107128 | 25107538 | 25107128 | ID=Msa0245400-mRNA-1:cds;Parent=Msa0245400-mRNA-1 |
| chr2_2 | CDS | 25109383 | 25109472 | 25109383 | ID=Msa0245400-mRNA-1:cds;Parent=Msa0245400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
